Rh2AG421000

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000083
Physical Location & Seq
Forward (+)
62499559 .. 62506345
6787 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG421000.1

Sequence Viewer

Length: 1782 bp
ATGCAGGGAAAACTCAGGTTGTTCAGCCATTTCTTTTATGCATTGCTTGGTTTCATTTTACCAGTACTTATAGTTCATGGCCAAGATCAAGCAGGCTTCATTAGCATAGACTGTGGCCTAGCAGCTAATTCTAGCTATAATGAACCAAAAACAGGCGTATTTTACGTGTCAGACACAACTTTCCTGGACAACATCACCGGTGAAAGTAAGCTCTTATTGCCAGAACACAGAGATGACTACCTACGGCAGGTCTGGAATCTCAGATACTTTCCCGAAGGTATCCGCAACTGTTACACCATAAACATAATTAGTAGCACCAAATATTTGATCAGAGCAACATTCTTTTACGGGGATTATGATGGCCAACACAAAGCACCGGTGTTCGATTTGCATCTTGGAGCAAACTACTGGGATACAGTGAAGTCAAACAACACAATCAAGGAGATCATACATGTCCCCTTGCAAAACTACATTCACATTTGTCTGGTCAACACAGGCTTTGGGACTCCCTATATATCAGCTATAGAACTAAGGCCCTTGGGTACTACAGTTTACAAGACTCAAATGGGCTCCTTGGCACTCTTCAATCGTTTGGACACTGGTTCAATAACGAATAAAACATACATGTATAACGACGACGTTCATGATCGCTGGTGGTACCCTTTTTCTTACAATGGATGGACACAACTAAGTACCTCGCTTACCATTGACTCTGCAACAAGTGAAAATCCCTACCAACTGCCATCTATTGTCATGAGCACTGCTGCAACACCGAAAAATGAAAATGCTTCCTTGTATATTGGGTGGACTCCCCCGGATAGCAATACCGAATACTATGTCTACATGCACTTCGCTGAAGTTGAAAGTCTCCCAGCCAACCAATCTAGACTCTTGAGCATTACTTGGAATGGAAAGCCCTTCTATCGTCCTTTTAGTCCAGCATACTTATCCTCATTTACTGTATTCACCCAAGGGCCCTTGACTGGAGGGCTTCATAATTTTTCAATCTCTCAAGTAGGAAACTCTACCCTTCCGCCCATCATCAATGCCTTCGAGATTTATACAGTTATCGAGTTCTTACAGGAAGAAACAAACCAAGAAGAAGTGGACACCATGAAGAAAATCAAGTCAACCTATGGAGTGAAGAAAAATTGGCAAGGTGATCCATGTGCTCCTCAACAGTATGTGTGGGCAGGTTTAAACTGCAGTTACGATGGTTATGACTCCCCCAGAATCAATTCCTTCTTGTGTGAAAACCAAAATCTAACTGCTCCAGTTTCCTGCGGATCAAAGGAAAAGAAGAAGAACAAAAACAATTTTGTTGTTCCAGTAGTAGCGTCAGTTGTTGGAACTTTAGTCCTTTTATTATTAACTGCAGCAGCTGTTTGTTGGGGACTGACAAGGAGAAGGAAACAAGGAGATGTTAATGATTCAATACCAACCATTCAGCCAGAGTCAATTGAGCCATCATCACGACGTCAATTTACTTACTCTGAGGTTCTCCAAATCACCAACAATTTTACGAGAATTATTGGTAGAGGAGGATTTGGAATAGTATATCATGGCACCATAGGTGACACTCAAGTAGCTGTGAAGTTGCTTTCACCATCTTCAGTTCAAGGATATCAAGAATTTCATTCAGAGGTTAATCTTCTAATGAGAGTTCATCACAAAAACTTGACGAGCCTTGTTGGATATTGCAAGGATGGAACCAATGCAGGGCTTATCTATGAATATATGGCTAATGGAAACTTACACAAACATCTTTCAGCTAACAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

593

Amino Acids

66.76

Weight (kDa)

6.76

Isoelectric Point (pI)

45.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 36 - 356 9.6e-112 Malectin-like domain
PK_Tyr_Ser-Thr PF07714 507 - 592 4.8e-15 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 508 - 592 2.1e-10 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1480
Acc36I ACCTGC 2 cut(s) 238, 1184
Acc65I GGTACC 1 cut(s) 657
AccB1I GGYRCC 2 cut(s) 657, 1565
AccI GTMKAC 1 cut(s) 840
AciI CCGC 3 cut(s) 283, 1034, 1284
AclWI GGATC 2 cut(s) 1157, 1294
AcoI YGGCCR 2 cut(s) 79, 361
AcsI RAATTY 1 cut(s) 1631
AcuI CTGAAG 2 cut(s) 876, 1596
AcyI GRCGYC 1 cut(s) 1477
AfaI GTAC 4 cut(s) 66, 544, 659, 694
AfiI CCNNNNNNNGG 4 cut(s) 152, 247, 983, 1719
AflIII ACRYGT 3 cut(s) 165, 451, 624
AgeI ACCGGT 2 cut(s) 197, 376
AgsI TTSAA 6 cut(s) 586, 606, 863, 1005, 1434, 1619
AjnI CCWGG 1 cut(s) 183
AluBI AGCT 7 cut(s) 125, 135, 211, 521, 1382, 1589, 1772
AluI AGCT 7 cut(s) 125, 135, 211, 521, 1382, 1589, 1772
Alw21I GWGCWC 2 cut(s) 761, 1174
Alw26I GTCTC 1 cut(s) 872
AlwI GGATC 2 cut(s) 1157, 1294
AlwNI CAGNNNCTG 1 cut(s) 1382
AoxI GGCC 5 cut(s) 79, 115, 361, 533, 974
ApaI GGGCCC 1 cut(s) 978
ApeKI GCWGC 4 cut(s) 122, 764, 1376, 1379
ApoI RAATTY 1 cut(s) 1631
ArsI GACNNNNNNTTYG 2 cut(s) 822, 854
AsiGI ACCGGT 2 cut(s) 197, 376
Asp700I GAANNNNTTC 1 cut(s) 1237
Asp718I GGTACC 1 cut(s) 657
AspS9I GGNCC 3 cut(s) 534, 974, 975
AsuC2I CCSGG 1 cut(s) 815
AsuHPI GGTGA 7 cut(s) 187, 212, 958, 1172, 1501, 1586, 1596
BaeGI GKGCMC 1 cut(s) 978
BaeI ACNNNNGTAYC 2 cut(s) 534, 567
BalI TGGCCA 2 cut(s) 81, 363
BanI GGYRCC 2 cut(s) 657, 1565
BanII GRGCYC 2 cut(s) 572, 978
Bbv12I GWGCWC 2 cut(s) 761, 1174
BbvI GCAGC 4 cut(s) 134, 751, 1388, 1391
BccI CCATC 8 cut(s) 353, 672, 751, 1046, 1208, 1474, 1615, 1700
BceAI ACGGC 1 cut(s) 260
BciT130I CCWGG 1 cut(s) 185
BciVI GTATCC 2 cut(s) 290, 406
BclI TGATCA 1 cut(s) 327
BcnI CCSGG 1 cut(s) 815
BcoDI GTCTC 1 cut(s) 872
BfaI CTAG 3 cut(s) 119, 132, 885
BfmI CTRYAG 4 cut(s) 522, 546, 1204, 1374
BfuAI ACCTGC 2 cut(s) 238, 1184
BfuI GTATCC 2 cut(s) 290, 406
BisI GCNGC 4 cut(s) 123, 765, 1377, 1380
BlsI GCNGC 4 cut(s) 124, 766, 1378, 1381
BmcAI AGTACT 1 cut(s) 66
Bme1390I CCNGG 2 cut(s) 185, 815
BmgT120I GGNCC 3 cut(s) 534, 974, 975
BmiI GGNNCC 5 cut(s) 571, 659, 976, 1567, 1711
BmrFI CCNGG 2 cut(s) 185, 815
BmrI ACTGGG 1 cut(s) 418
BmsI GCATC 1 cut(s) 400
BmuI ACTGGG 1 cut(s) 418
BpmI CTGGAG 2 cut(s) 1005, 1257
BpuEI CTTGAG 3 cut(s) 913, 996, 1566
BpuMI CCSGG 1 cut(s) 815
BsaAI YACGTR 1 cut(s) 166
BsaBI GATNNNNATC 1 cut(s) 390
BsaHI GRCGYC 1 cut(s) 1477
BsaJI CCNNGG 4 cut(s) 537, 573, 813, 970
BsaWI WCCGGW 2 cut(s) 197, 376
Bsc4I CCNNNNNNNGG 4 cut(s) 152, 247, 983, 1719
Bse118I RCCGGY 2 cut(s) 197, 376
Bse1I ACTGG 6 cut(s) 62, 413, 604, 988, 1274, 1328
Bse3DI GCAATG 1 cut(s) 41
Bse8I GATNNNNATC 1 cut(s) 390
BseBI CCWGG 1 cut(s) 185
BseDI CCNNGG 4 cut(s) 537, 573, 813, 970
BseGI GGATG 2 cut(s) 683, 1711
BseJI GATNNNNATC 1 cut(s) 390
BseLI CCNNNNNNNGG 4 cut(s) 152, 247, 983, 1719
BseMI GCAATG 1 cut(s) 41
BseMII CTCAG 3 cut(s) 28, 274, 1485
BseNI ACTGG 6 cut(s) 62, 413, 604, 988, 1274, 1328
BseRI GAGGAG 2 cut(s) 1164, 1554
BseSI GKGCMC 1 cut(s) 978
BseXI GCAGC 4 cut(s) 134, 751, 1388, 1391
BseYI CCCAGC 1 cut(s) 871
BshFI GGCC 5 cut(s) 81, 117, 363, 535, 976
BshNI GGYRCC 2 cut(s) 657, 1565
BshTI ACCGGT 2 cut(s) 197, 376
BsiHKAI GWGCWC 2 cut(s) 761, 1174
BsiSI CCGG 3 cut(s) 198, 377, 815
BslFI GGGAC 3 cut(s) 440, 517, 1407
BslI CCNNNNNNNGG 4 cut(s) 152, 247, 983, 1719
BsmAI GTCTC 1 cut(s) 872
BsmFI GGGAC 3 cut(s) 440, 517, 1407
BsnI GGCC 5 cut(s) 81, 117, 363, 535, 976
Bsp120I GGGCCC 1 cut(s) 974
Bsp1286I GDGCHC 4 cut(s) 572, 761, 978, 1174
Bsp143I GATC 6 cut(s) 85, 327, 444, 646, 1162, 1286
BspACI CCGC 3 cut(s) 283, 1034, 1284
BspANI GGCC 5 cut(s) 81, 117, 363, 535, 976
BspCNI CTCAG 3 cut(s) 27, 273, 1486
BspHI TCATGA 2 cut(s) 643, 753
BspLI GGNNCC 5 cut(s) 571, 659, 976, 1567, 1711
BspMAI CTGCAG 2 cut(s) 1208, 1378
BspMI ACCTGC 2 cut(s) 238, 1184
BspPI GGATC 2 cut(s) 1157, 1294
BspT107I GGYRCC 2 cut(s) 657, 1565
BsrDI GCAATG 1 cut(s) 41
BsrFI RCCGGY 2 cut(s) 197, 376
BsrI ACTGG 6 cut(s) 62, 413, 604, 988, 1274, 1328
BssAI RCCGGY 2 cut(s) 197, 376
BssECI CCNNGG 4 cut(s) 537, 573, 813, 970
BssMI GATC 6 cut(s) 85, 327, 444, 646, 1162, 1286
BssNI GRCGYC 1 cut(s) 1477
BssT1I CCWWGG 3 cut(s) 537, 573, 970
Bst2UI CCWGG 1 cut(s) 185
Bst4CI ACNGT 7 cut(s) 113, 290, 418, 550, 961, 1066, 1182
Bst6I CTCTTC 1 cut(s) 587
BstACI GRCGYC 1 cut(s) 1477
BstBAI YACGTR 1 cut(s) 166
BstC8I GCNNGC 1 cut(s) 94
BstDEI CTNAG 5 cut(s) 14, 260, 530, 689, 1494
BstENI CCTNNNNNAGG 1 cut(s) 245
BstF5I GGATG 2 cut(s) 683, 1711
BstKTI GATC 6 cut(s) 88, 330, 447, 649, 1165, 1289
BstMAI GTCTC 1 cut(s) 872
BstMBI GATC 6 cut(s) 85, 327, 444, 646, 1162, 1286
BstMWI GCNNNNNNNGC 2 cut(s) 102, 217
BstNI CCWGG 1 cut(s) 185
BstNSI RCATGY 3 cut(s) 455, 628, 847
BstSCI CCNGG 2 cut(s) 183, 813
BstSFI CTRYAG 4 cut(s) 522, 546, 1204, 1374
BstSLI GKGCMC 1 cut(s) 978
BstV1I GCAGC 4 cut(s) 134, 751, 1388, 1391
BsuI GTATCC 2 cut(s) 290, 406
BsuRI GGCC 5 cut(s) 81, 117, 363, 535, 976
BtsCI GGATG 2 cut(s) 683, 1711
BtsI GCAGTG 1 cut(s) 759
BtsIMutI CAGTG 3 cut(s) 423, 597, 759
BveI ACCTGC 2 cut(s) 238, 1184
Cac8I GCNNGC 1 cut(s) 94
CaiI CAGNNNCTG 1 cut(s) 1382
CciI TCATGA 2 cut(s) 643, 753
Cfr10I RCCGGY 2 cut(s) 197, 376
Cfr13I GGNCC 3 cut(s) 534, 974, 975
CseI GACGC 1 cut(s) 1326
Csp6I GTAC 4 cut(s) 65, 543, 658, 693
CspAI ACCGGT 2 cut(s) 197, 376
CviAII CATG 9 cut(s) 77, 452, 625, 644, 754, 844, 1114, 1167, 1562
CviQI GTAC 4 cut(s) 65, 543, 658, 693
DdeI CTNAG 5 cut(s) 14, 260, 530, 689, 1494
DpnI GATC 6 cut(s) 87, 329, 446, 648, 1164, 1288
DpnII GATC 6 cut(s) 85, 327, 444, 646, 1162, 1286
DraI TTTAAA 1 cut(s) 1200
EaeI YGGCCR 2 cut(s) 79, 361
Eam1104I CTCTTC 1 cut(s) 587
EarI CTCTTC 1 cut(s) 587
EciI GGCGGA 1 cut(s) 1023
Eco130I CCWWGG 3 cut(s) 537, 573, 970
Eco24I GRGCYC 2 cut(s) 572, 978
Eco32I GATATC 1 cut(s) 1625
Eco57I CTGAAG 2 cut(s) 876, 1596
EcoNI CCTNNNNNAGG 1 cut(s) 245
EcoO109I RGGNCCY 3 cut(s) 534, 974, 975
EcoRII CCWGG 1 cut(s) 183
EcoRV GATATC 1 cut(s) 1625
EcoT14I CCWWGG 3 cut(s) 537, 573, 970
EcoT22I ATGCAT 1 cut(s) 43
EcoT38I GRGCYC 2 cut(s) 572, 978
ErhI CCWWGG 3 cut(s) 537, 573, 970
FaeI CATG 9 cut(s) 80, 455, 628, 647, 757, 847, 1117, 1170, 1565
FaqI GGGAC 3 cut(s) 440, 517, 1407
FatI CATG 9 cut(s) 76, 451, 624, 643, 753, 843, 1113, 1166, 1561
FbaI TGATCA 1 cut(s) 327
FblI GTMKAC 1 cut(s) 840
Fnu4HI GCNGC 4 cut(s) 123, 765, 1377, 1380
FokI GGATG 2 cut(s) 690, 1718
FriOI GRGCYC 2 cut(s) 572, 978
Fsp4HI GCNGC 4 cut(s) 123, 765, 1377, 1380
FspBI CTAG 3 cut(s) 119, 132, 885
GluI GCNGC 4 cut(s) 123, 765, 1377, 1380
GsaI CCCAGC 1 cut(s) 875
GsuI CTGGAG 2 cut(s) 1005, 1257
HaeIII GGCC 5 cut(s) 81, 117, 363, 535, 976
HapII CCGG 3 cut(s) 198, 377, 815
HgaI GACGC 1 cut(s) 1326
Hin1I GRCGYC 1 cut(s) 1477
Hin1II CATG 9 cut(s) 80, 455, 628, 647, 757, 847, 1117, 1170, 1565
HincII GTYRAC 2 cut(s) 490, 1131
HindII GTYRAC 2 cut(s) 490, 1131
HpaII CCGG 3 cut(s) 198, 377, 815
HphI GGTGA 7 cut(s) 187, 212, 958, 1172, 1501, 1586, 1596
Hpy166II GTNNAC 6 cut(s) 490, 553, 807, 841, 1108, 1131
Hpy188I TCNGA 5 cut(s) 172, 263, 332, 1495, 1642
Hpy188III TCNNGA 9 cut(s) 253, 272, 644, 754, 885, 892, 1054, 1473, 1628
Hpy8I GTNNAC 6 cut(s) 490, 553, 807, 841, 1108, 1131
Hpy99I CGWCG 3 cut(s) 638, 641, 1479
HpyAV CCTTC 6 cut(s) 269, 928, 1040, 1060, 1252, 1401
HpyCH4III ACNGT 7 cut(s) 113, 290, 418, 550, 961, 1066, 1182
HpyCH4IV ACGT 3 cut(s) 165, 639, 1477
HpyF10VI GCNNNNNNNGC 2 cut(s) 102, 217
HpyF3I CTNAG 5 cut(s) 14, 260, 530, 689, 1494
HpySE526I ACGT 3 cut(s) 165, 639, 1477
Hsp92I GRCGYC 1 cut(s) 1477
Hsp92II CATG 9 cut(s) 80, 455, 628, 647, 757, 847, 1117, 1170, 1565
KpnI GGTACC 1 cut(s) 661
Ksp22I TGATCA 1 cut(s) 327
Kzo9I GATC 6 cut(s) 85, 327, 444, 646, 1162, 1286
LmnI GCTCC 4 cut(s) 398, 575, 1177, 1276
Lsp1109I GCAGC 4 cut(s) 134, 751, 1388, 1391
LweI GCATC 1 cut(s) 400
MaeI CTAG 3 cut(s) 119, 132, 885
MaeII ACGT 3 cut(s) 165, 639, 1477
MaeIII GTNAC 3 cut(s) 290, 1208, 1574
MalI GATC 6 cut(s) 87, 329, 446, 648, 1164, 1288
MboI GATC 6 cut(s) 85, 327, 444, 646, 1162, 1286
MboII GAAGA 9 cut(s) 574, 1097, 1112, 1129, 1156, 1312, 1315, 1602, 1643
MfeI CAATTG 1 cut(s) 1458
MhlI GDGCHC 4 cut(s) 572, 761, 978, 1174
MlsI TGGCCA 2 cut(s) 81, 363
MluNI TGGCCA 2 cut(s) 81, 363
MlyI GAGTC 7 cut(s) 499, 553, 704, 802, 882, 1217, 1463
MmeI TCCRAC 2 cut(s) 1327, 1672
MnlI CCTC 8 cut(s) 706, 961, 980, 1185, 1489, 1532, 1535, 1636
Mox20I TGGCCA 2 cut(s) 81, 363
Mph1103I ATGCAT 1 cut(s) 43
MroXI GAANNNNTTC 1 cut(s) 1237
MscI TGGCCA 2 cut(s) 81, 363
MseI TTAA 4 cut(s) 1199, 1370, 1425, 1647
MslI CAYNNNNRTG 1 cut(s) 231
Msp20I TGGCCA 2 cut(s) 81, 363
MspA1I CMGCKG 1 cut(s) 1382
MspI CCGG 3 cut(s) 198, 377, 815
MspR9I CCNGG 2 cut(s) 185, 815
MssI GTTTAAAC 1 cut(s) 1200
MunI CAATTG 1 cut(s) 1458
MvaI CCWGG 1 cut(s) 185
MwoI GCNNNNNNNGC 2 cut(s) 102, 217
NciI CCSGG 1 cut(s) 815
NdeII GATC 6 cut(s) 85, 327, 444, 646, 1162, 1286
NlaIII CATG 9 cut(s) 80, 455, 628, 647, 757, 847, 1117, 1170, 1565
NlaIV GGNNCC 5 cut(s) 571, 659, 976, 1567, 1711
NmuCI GTSAC 1 cut(s) 1574
NsiI ATGCAT 1 cut(s) 43
NspI RCATGY 3 cut(s) 455, 628, 847
PagI TCATGA 2 cut(s) 643, 753
PciI ACATGT 2 cut(s) 451, 624
PdmI GAANNNNTTC 1 cut(s) 1237
PfeI GAWTC 3 cut(s) 256, 1233, 1430
PfoI TCCNGGA 1 cut(s) 183
PinAI ACCGGT 2 cut(s) 197, 376
PkrI GCNGC 4 cut(s) 124, 766, 1378, 1381
PleI GAGTC 7 cut(s) 499, 553, 704, 802, 882, 1217, 1462
PmeI GTTTAAAC 1 cut(s) 1200
PpsI GAGTC 7 cut(s) 499, 553, 704, 802, 882, 1217, 1462
Ppu21I YACGTR 1 cut(s) 166
PscI ACATGT 2 cut(s) 451, 624
Psp6I CCWGG 1 cut(s) 183
PspFI CCCAGC 1 cut(s) 871
PspGI CCWGG 1 cut(s) 183
PspN4I GGNNCC 5 cut(s) 571, 659, 976, 1567, 1711
PspOMI GGGCCC 1 cut(s) 974
PspPI GGNCC 3 cut(s) 534, 974, 975
PsrI GAACNNNNNNTAC 2 cut(s) 57, 89
PstI CTGCAG 2 cut(s) 1208, 1378
PstNI CAGNNNCTG 1 cut(s) 1382
PvuII CAGCTG 1 cut(s) 1382
RsaI GTAC 4 cut(s) 66, 544, 659, 694
RsaNI GTAC 4 cut(s) 65, 543, 658, 693
RseI CAYNNNNRTG 1 cut(s) 231
SaqAI TTAA 4 cut(s) 1199, 1370, 1425, 1647
SatI GCNGC 4 cut(s) 123, 765, 1377, 1380
Sau3AI GATC 6 cut(s) 85, 327, 444, 646, 1162, 1286
Sau96I GGNCC 3 cut(s) 534, 974, 975
ScaI AGTACT 1 cut(s) 66
SchI GAGTC 7 cut(s) 499, 553, 704, 802, 882, 1217, 1463
ScrFI CCNGG 2 cut(s) 185, 815
SduI GDGCHC 4 cut(s) 572, 761, 978, 1174
SfaNI GCATC 1 cut(s) 400
SfcI CTRYAG 4 cut(s) 522, 546, 1204, 1374
SgrAI CRCCGGYG 2 cut(s) 197, 376
SmiMI CAYNNNNRTG 1 cut(s) 231
SmlI CTYRAG 3 cut(s) 892, 1011, 1581
SmoI CTYRAG 3 cut(s) 892, 1011, 1581
SsiI CCGC 3 cut(s) 283, 1034, 1284
SspI AATATT 1 cut(s) 323
SspMI CTAG 3 cut(s) 119, 132, 885
StyD4I CCNGG 2 cut(s) 183, 813
StyI CCWWGG 3 cut(s) 537, 573, 970
TaaI ACNGT 7 cut(s) 113, 290, 418, 550, 961, 1066, 1182
TaiI ACGT 3 cut(s) 168, 642, 1480
TaqI TCGA 3 cut(s) 384, 1053, 1071
TatI WGTACW 1 cut(s) 64
TfiI GAWTC 3 cut(s) 256, 1233, 1430
Tru1I TTAA 4 cut(s) 1199, 1370, 1425, 1647
Tru9I TTAA 4 cut(s) 1199, 1370, 1425, 1647
TscAI CASTG 3 cut(s) 423, 604, 766
TseFI GTSAC 1 cut(s) 1574
TseI GCWGC 4 cut(s) 122, 764, 1376, 1379
Tsp45I GTSAC 1 cut(s) 1574
TspRI CASTG 3 cut(s) 423, 604, 766
XagI CCTNNNNNAGG 1 cut(s) 245
XapI RAATTY 1 cut(s) 1631
XbaI TCTAGA 1 cut(s) 884
XceI RCATGY 3 cut(s) 455, 628, 847
XmiI GTMKAC 1 cut(s) 840
XmnI GAANNNNTTC 1 cut(s) 1237
XspI CTAG 3 cut(s) 119, 132, 885
ZraI GACGTC 1 cut(s) 1478
ZrmI AGTACT 1 cut(s) 66
Zsp2I ATGCAT 1 cut(s) 43
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.