RchiOBHm_Chr1g0317521

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000083
Physical Location & Seq
Forward (+)
5061473 .. 5065141
3669 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54784

Sequence Viewer

Length: 1959 bp
ATGATGTTGCTTCCACTGAAGCAAATCCTCTTTGCGCTGCTCGGTGGTTTTTCTCTTATACTCCTAGTCCATGCCGAGGATGATCAATCAGGCTTCATTAGCATAGATTGCGGCCGAACTCAAAATTCCAGCTACACTGAGAAGACAACAGGCATCAACTACATTTCTGACACAGGCTTCATAGACACCGGTGAAAGTAAGCTCGTTTTGCGTTATGTAAAAGATATTTATCAACAGCCATACTGGGGTGTCAGGAGCTTTCCCGAAGGAATCAGGAACTGCTACAAGATCAATGTTACAAGTGGGGACAAATATTTGATCAGAGCAAGTTTCGTGTATGGGAACTATGATAGCAAAGATGAACTACCAACATTCCTCCTTCATCTTGGAACAGATTTGTGGGATTCAGTGAAGGTGGAGAATGTATCCCTTTTCATAAACAAGGAGCTCATCCATGTCCCTCTCCGAAATTATATACATGTTTGTCTGGTGAACAATGGCTCCGGGGTTCCGTTTATATCAGCATTAGAATTAAGGCGTTTGAACATTACATCCTATCAAACACAAATTGGGTCCTTGGCACTTAACCGGCGGCTTGACATTGGACAAATAGCACCTGATCTAAAATCTTATAGGTATCCAAAGGATATTTATGATCGCTTTTGGTATCCCTATGAGGATGTTGACAATCAGTGGTTAACATTGGATACTTCATTCACCGTCGACTTTGACAAACATAACAGCTTCCAACCAGCATCAATTGTCATGAGCACAGCTGCCACATCACAAAATCCTAATGTTCCCTTGAATTTATGGTGGGATCCTCCTATTGATGCAGACGATACAGAATATTATGTTTACATGCACTTTGCAGAAATTGAACAGCTCCAATCCAACGAGTCCAGAATGCAGTACATTACTAACCATGGAGAGCTCTACCGGAAGTCATTTGCTGCTAGTTATTTGTACACCACAACAATTTACAGCAGGACAGGTTTGAGAGGAGGGCAGAATTTTTCAATCATCAAGGATGACAACTCTACCCTTCCACCCAGTATCAATGGAGTTGAGGTTTACACACTGAAAGAATTCCTAGAATTAGAAACAAAGCAAGAGGATGTTGAAGCAATCACAAACGTCAAGTCAACTTATGAAATTACAAAGAATTGGCAGGGAGATCCATGTCTCCCACTAAACTACTCGTGGGAAGGCCTAAAATGTAGCTATCCTGAAGATGACTCCCCAAGAATCATTTCCTTGGACTTGTCGATGAGTGGATTAACAGGAGAGATTTCTCATTCAATATCCAATCTCGCAATGATACAAACATTGGATTTATCAAACAACAACTTGACAGGACCAATTCCGGACTTTTTGTCTCAATTGCCAGATTTAAATGTCCTGAACCTGGAGAAAAACAAGTTCACAGGCTCACTTCCACTAGGACTCGTTGAAAGAAGGAAGAATGGCCTCCTATCAATAAGTTTGTGTGACAACCCAAATCTAGCCGCAAATGAATCTTGCACAACAAAAAAGAAGAACAAAAGCATTATTCCAATAATTGGAGCTATTGCCGGAATTTCAACCCTCATGTTAGCTGGAGCAGTTTTCTTCTGTTTCTGTAAAAAGAAAAGACTACATGCTGCAATCGATTCAAAACCCAACCCTGGATCAGTGGAACTCGAGCAAAAAAACCGAAAGTTTACATACTCTGAGATCCTCAAGATCACAAACAACCGGCAAAGGGTTCTTGGCAAAGGTGGATTTGGAACTGTTTATCATGGCTACATAGATGACAAAACTCAAGTAGCTGTCAAGCTGCTTTCACCATCATCAAGTCAAGGACTTCAACAATTTCACGCAGAGGCAAATGAGGGTGTCAAGGCGCCCTCCACCCTGGCCCAATTCAGAAAGGAACTAGACCTACTCCAATGGGCCCATAGGATGTTAAGCCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

652

Amino Acids

73.55

Weight (kDa)

5.82

Isoelectric Point (pI)

35.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 35 - 360 7.1e-101 Malectin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1885
AccB7I CCANNNNNTGG 1 cut(s) 1562
AccI GTMKAC 1 cut(s) 723
AccIII TCCGGA 1 cut(s) 1366
AciI CCGC 3 cut(s) 111, 592, 1509
AclWI GGATC 5 cut(s) 815, 828, 1172, 1678, 1711
AcoI YGGCCR 1 cut(s) 112
AcsI RAATTY 5 cut(s) 124, 808, 1012, 1088, 1578
AcuI CTGAAG 2 cut(s) 38, 1251
AcyI GRCGYC 1 cut(s) 1886
AfaI GTAC 2 cut(s) 914, 968
AfiI CCNNNNNNNGG 6 cut(s) 76, 245, 1408, 1562, 1667, 1744
AflIII ACRYGT 1 cut(s) 478
AgeI ACCGGT 1 cut(s) 188
AhdI GACNNNNNGTC 1 cut(s) 1375
AjnI CCWGG 3 cut(s) 1407, 1666, 1896
AjuI GAANNNNNNNTTGG 2 cut(s) 1237, 1269
AloI GAACNNNNNNTCC 4 cut(s) 485, 517, 536, 568
Alw21I GWGCWC 3 cut(s) 450, 773, 936
Alw26I GTCTC 2 cut(s) 1190, 1383
AlwI GGATC 5 cut(s) 815, 828, 1172, 1678, 1711
AlwNI CAGNNNCTG 1 cut(s) 279
Ama87I CYCGRG 1 cut(s) 1682
Aor13HI TCCGGA 1 cut(s) 1366
AoxI GGCC 5 cut(s) 112, 1210, 1468, 1899, 1935
ApaI GGGCCC 1 cut(s) 1939
ApeKI GCWGC 5 cut(s) 37, 776, 953, 1643, 1819
ApoI RAATTY 5 cut(s) 124, 808, 1012, 1088, 1578
ArsI GACNNNNNNTTYG 2 cut(s) 1127, 1159
AsiGI ACCGGT 1 cut(s) 188
Asp700I GAANNNNTTC 2 cut(s) 1088, 1252
AspLEI GCGC 2 cut(s) 37, 1888
AspS9I GGNCC 5 cut(s) 573, 1358, 1900, 1935, 1936
AsuC2I CCSGG 1 cut(s) 505
AsuHPI GGTGA 4 cut(s) 203, 502, 709, 1818
AvaI CYCGRG 1 cut(s) 1682
AvaII GGWCC 2 cut(s) 573, 1358
BaeGI GKGCMC 1 cut(s) 1939
BamHI GGATCC 1 cut(s) 820
BanI GGYRCC 1 cut(s) 1885
BanII GRGCYC 3 cut(s) 450, 936, 1939
BauI CACGAG 1 cut(s) 1201
BbsI GAAGAC 1 cut(s) 149
Bbv12I GWGCWC 3 cut(s) 450, 773, 936
BbvI GCAGC 5 cut(s) 24, 763, 940, 1630, 1806
BccI CCATC 1 cut(s) 1837
BciT130I CCWGG 3 cut(s) 1409, 1668, 1898
BciVI GTATCC 4 cut(s) 436, 648, 678, 700
BclI TGATCA 2 cut(s) 82, 318
BcnI CCSGG 1 cut(s) 505
BcoDI GTCTC 2 cut(s) 1190, 1383
BfaI CTAG 6 cut(s) 65, 957, 1094, 1442, 1505, 1919
BfoI RGCGCY 1 cut(s) 1889
BfuI GTATCC 4 cut(s) 436, 648, 678, 700
BisI GCNGC 8 cut(s) 38, 112, 593, 777, 954, 1509, 1644, 1820
BlsI GCNGC 8 cut(s) 39, 113, 594, 778, 955, 1510, 1645, 1821
Bme1390I CCNGG 4 cut(s) 505, 1409, 1668, 1898
Bme18I GGWCC 2 cut(s) 573, 1358
BmeRI GACNNNNNGTC 1 cut(s) 1375
BmeT110I CYCGRG 1 cut(s) 1682
BmgT120I GGNCC 5 cut(s) 573, 1358, 1900, 1935, 1936
BmiI GGNNCC 6 cut(s) 502, 510, 574, 822, 1887, 1937
BmrFI CCNGG 4 cut(s) 505, 1409, 1668, 1898
BmrI ACTGGG 2 cut(s) 253, 1047
BmsI GCATC 3 cut(s) 162, 764, 823
BmuI ACTGGG 2 cut(s) 253, 1047
BpiI GAAGAC 1 cut(s) 149
BpmI CTGGAG 2 cut(s) 1430, 1620
BpuEI CTTGAG 2 cut(s) 1706, 1788
BpuMI CCSGG 1 cut(s) 505
Bsa29I ATCGAT 1 cut(s) 1650
BsaBI GATNNNNATC 1 cut(s) 228
BsaHI GRCGYC 1 cut(s) 1886
BsaJI CCNNGG 7 cut(s) 75, 504, 576, 925, 1257, 1666, 1896
BsaWI WCCGGW 3 cut(s) 188, 939, 1366
BsaXI ACNNNNNCTCC 4 cut(s) 485, 515, 1056, 1086
Bsc4I CCNNNNNNNGG 6 cut(s) 76, 245, 1408, 1562, 1667, 1744
Bse118I RCCGGY 3 cut(s) 188, 588, 1737
Bse1I ACTGG 2 cut(s) 248, 1053
Bse3DI GCAATG 1 cut(s) 1323
Bse8I GATNNNNATC 1 cut(s) 228
BseAI TCCGGA 1 cut(s) 1366
BseBI CCWGG 3 cut(s) 1409, 1668, 1898
BseCI ATCGAT 1 cut(s) 1650
BseDI CCNNGG 7 cut(s) 75, 504, 576, 925, 1257, 1666, 1896
BseGI GGATG 7 cut(s) 85, 450, 551, 685, 1036, 1123, 1950
BseJI GATNNNNATC 1 cut(s) 228
BseLI CCNNNNNNNGG 6 cut(s) 76, 245, 1408, 1562, 1667, 1744
BseMI GCAATG 1 cut(s) 1323
BseMII CTCAG 2 cut(s) 129, 1704
BseNI ACTGG 2 cut(s) 248, 1053
BseRI GAGGAG 1 cut(s) 1017
BseSI GKGCMC 1 cut(s) 1939
BseX3I CGGCCG 1 cut(s) 112
BseXI GCAGC 5 cut(s) 24, 763, 940, 1630, 1806
Bsh1285I CGRYCG 1 cut(s) 115
BshFI GGCC 5 cut(s) 114, 1212, 1470, 1901, 1937
BshNI GGYRCC 1 cut(s) 1885
BshTI ACCGGT 1 cut(s) 188
BshVI ATCGAT 1 cut(s) 1650
BsiEI CGRYCG 1 cut(s) 115
BsiHKAI GWGCWC 3 cut(s) 450, 773, 936
BsiHKCI CYCGRG 1 cut(s) 1682
BsiSI CCGG 7 cut(s) 189, 504, 589, 940, 1367, 1575, 1738
BslFI GGGAC 2 cut(s) 320, 443
BslI CCNNNNNNNGG 6 cut(s) 76, 245, 1408, 1562, 1667, 1744
BsmAI GTCTC 2 cut(s) 1190, 1383
BsmFI GGGAC 2 cut(s) 320, 443
BsmI GAATGC 1 cut(s) 912
BsnI GGCC 5 cut(s) 114, 1212, 1470, 1901, 1937
BsoBI CYCGRG 1 cut(s) 1682
Bsp120I GGGCCC 1 cut(s) 1935
Bsp1286I GDGCHC 4 cut(s) 450, 773, 936, 1939
Bsp13I TCCGGA 1 cut(s) 1366
Bsp1407I TGTACA 1 cut(s) 966
Bsp19I CCATGG 1 cut(s) 925
BspACI CCGC 3 cut(s) 111, 592, 1509
BspANI GGCC 5 cut(s) 114, 1212, 1470, 1901, 1937
BspCNI CTCAG 2 cut(s) 130, 1705
BspDI ATCGAT 1 cut(s) 1650
BspEI TCCGGA 1 cut(s) 1366
BspHI TCATGA 1 cut(s) 765
BspLI GGNNCC 6 cut(s) 502, 510, 574, 822, 1887, 1937
BspPI GGATC 5 cut(s) 815, 828, 1172, 1678, 1711
BspT107I GGYRCC 1 cut(s) 1885
BsrDI GCAATG 1 cut(s) 1323
BsrFI RCCGGY 3 cut(s) 188, 588, 1737
BsrGI TGTACA 1 cut(s) 966
BsrI ACTGG 2 cut(s) 248, 1053
BssAI RCCGGY 3 cut(s) 188, 588, 1737
BssECI CCNNGG 7 cut(s) 75, 504, 576, 925, 1257, 1666, 1896
BssNI GRCGYC 1 cut(s) 1886
BssSI CACGAG 1 cut(s) 1201
BssT1I CCWWGG 3 cut(s) 576, 925, 1257
Bst2BI CACGAG 1 cut(s) 1201
Bst2UI CCWGG 3 cut(s) 1409, 1668, 1898
Bst4CI ACNGT 2 cut(s) 721, 1774
BstACI GRCGYC 1 cut(s) 1886
BstAPI GCANNNNNTGC 1 cut(s) 108
BstAUI TGTACA 1 cut(s) 966
BstDEI CTNAG 2 cut(s) 138, 1713
BstDSI CCRYGG 1 cut(s) 925
BstF5I GGATG 7 cut(s) 85, 450, 551, 685, 1036, 1123, 1950
BstH2I RGCGCY 1 cut(s) 1889
BstHHI GCGC 2 cut(s) 37, 1888
BstMAI GTCTC 2 cut(s) 1190, 1383
BstMCI CGRYCG 1 cut(s) 115
BstMWI GCNNNNNNNGC 3 cut(s) 99, 108, 208
BstNI CCWGG 3 cut(s) 1409, 1668, 1898
BstNSI RCATGY 3 cut(s) 482, 865, 1643
BstSCI CCNGG 4 cut(s) 503, 1407, 1666, 1896
BstSLI GKGCMC 1 cut(s) 1939
BstV1I GCAGC 5 cut(s) 24, 763, 940, 1630, 1806
BstV2I GAAGAC 1 cut(s) 149
BstX2I RGATCY 3 cut(s) 820, 1177, 1716
BstYI RGATCY 3 cut(s) 820, 1177, 1716
BstZI CGGCCG 1 cut(s) 112
Bsu15I ATCGAT 1 cut(s) 1650
BsuI GTATCC 4 cut(s) 436, 648, 678, 700
BsuRI GGCC 5 cut(s) 114, 1212, 1470, 1901, 1937
BsuTUI ATCGAT 1 cut(s) 1650
BtgI CCRYGG 1 cut(s) 925
BtsCI GGATG 7 cut(s) 85, 450, 551, 685, 1036, 1123, 1950
BtsIMutI CAGTG 6 cut(s) 14, 135, 414, 698, 1079, 1680
CaiI CAGNNNCTG 1 cut(s) 279
CciI TCATGA 1 cut(s) 765
CfoI GCGC 2 cut(s) 37, 1888
Cfr10I RCCGGY 3 cut(s) 188, 588, 1737
Cfr13I GGNCC 5 cut(s) 573, 1358, 1900, 1935, 1936
ClaI ATCGAT 1 cut(s) 1650
Csp6I GTAC 2 cut(s) 913, 967
CspAI ACCGGT 1 cut(s) 188
CviQI GTAC 2 cut(s) 913, 967
DdeI CTNAG 2 cut(s) 138, 1713
DinI GGCGCC 1 cut(s) 1887
DraI TTTAAA 1 cut(s) 1395
DriI GACNNNNNGTC 1 cut(s) 1375
EaeI YGGCCR 1 cut(s) 112
EagI CGGCCG 1 cut(s) 112
Eam1105I GACNNNNNGTC 1 cut(s) 1375
Ecl136II GAGCTC 2 cut(s) 448, 934
EclXI CGGCCG 1 cut(s) 112
Eco130I CCWWGG 3 cut(s) 576, 925, 1257
Eco147I AGGCCT 1 cut(s) 1212
Eco24I GRGCYC 3 cut(s) 450, 936, 1939
Eco47I GGWCC 2 cut(s) 573, 1358
Eco52I CGGCCG 1 cut(s) 112
Eco53kI GAGCTC 2 cut(s) 448, 934
Eco57I CTGAAG 2 cut(s) 38, 1251
Eco88I CYCGRG 1 cut(s) 1682
EcoICRI GAGCTC 2 cut(s) 448, 934
EcoO109I RGGNCCY 1 cut(s) 573
EcoRI GAATTC 1 cut(s) 1088
EcoRII CCWGG 3 cut(s) 1407, 1666, 1896
EcoT14I CCWWGG 3 cut(s) 576, 925, 1257
EcoT38I GRGCYC 3 cut(s) 450, 936, 1939
EgeI GGCGCC 1 cut(s) 1887
EheI GGCGCC 1 cut(s) 1887
ErhI CCWWGG 3 cut(s) 576, 925, 1257
FaqI GGGAC 2 cut(s) 320, 443
FbaI TGATCA 2 cut(s) 82, 318
FblI GTMKAC 1 cut(s) 723
Fnu4HI GCNGC 8 cut(s) 38, 112, 593, 777, 954, 1509, 1644, 1820
FokI GGATG 6 cut(s) 92, 437, 538, 692, 1043, 1130
FriOI GRGCYC 3 cut(s) 450, 936, 1939
Fsp4HI GCNGC 8 cut(s) 38, 112, 593, 777, 954, 1509, 1644, 1820
FspBI CTAG 6 cut(s) 65, 957, 1094, 1442, 1505, 1919
GlaI GCGC 2 cut(s) 36, 1887
GluI GCNGC 8 cut(s) 38, 112, 593, 777, 954, 1509, 1644, 1820
GsuI CTGGAG 2 cut(s) 1430, 1620
HaeII RGCGCY 1 cut(s) 1889
HaeIII GGCC 5 cut(s) 114, 1212, 1470, 1901, 1937
HapII CCGG 7 cut(s) 189, 504, 589, 940, 1367, 1575, 1738
HhaI GCGC 2 cut(s) 37, 1888
Hin1I GRCGYC 1 cut(s) 1886
Hin6I GCGC 2 cut(s) 35, 1886
HinP1I GCGC 2 cut(s) 35, 1886
HincII GTYRAC 4 cut(s) 685, 699, 724, 1146
HindII GTYRAC 4 cut(s) 685, 699, 724, 1146
HinfI GANTC 8 cut(s) 270, 404, 899, 1238, 1248, 1446, 1517, 1652
HpaI GTTAAC 1 cut(s) 699
HpaII CCGG 7 cut(s) 189, 504, 589, 940, 1367, 1575, 1738
HphI GGTGA 4 cut(s) 203, 502, 709, 1818
Hpy188I TCNGA 5 cut(s) 169, 323, 467, 1714, 1910
Hpy188III TCNNGA 9 cut(s) 253, 263, 274, 766, 903, 1229, 1367, 1402, 1723
Hpy99I CGWCG 1 cut(s) 725
HpyAV CCTTC 6 cut(s) 260, 389, 406, 1055, 1202, 1452
HpyCH4III ACNGT 2 cut(s) 721, 1774
HpyCH4IV ACGT 1 cut(s) 1137
HpyCH4V TGCA 6 cut(s) 836, 865, 872, 910, 1524, 1646
HpyF10VI GCNNNNNNNGC 3 cut(s) 99, 108, 208
HpyF3I CTNAG 2 cut(s) 138, 1713
HpySE526I ACGT 1 cut(s) 1137
Hsp92I GRCGYC 1 cut(s) 1886
HspAI GCGC 2 cut(s) 35, 1886
KasI GGCGCC 1 cut(s) 1885
Kpn2I TCCGGA 1 cut(s) 1366
Ksp22I TGATCA 2 cut(s) 82, 318
KspAI GTTAAC 1 cut(s) 699
LmnI GCTCC 6 cut(s) 255, 445, 506, 891, 1565, 1601
Lsp1109I GCAGC 5 cut(s) 24, 763, 940, 1630, 1806
LweI GCATC 3 cut(s) 162, 764, 823
MaeI CTAG 6 cut(s) 65, 957, 1094, 1442, 1505, 1919
MaeII ACGT 1 cut(s) 1137
MaeIII GTNAC 2 cut(s) 295, 1490
MboII GAAGA 5 cut(s) 154, 1244, 1474, 1549, 1603
MfeI CAATTG 2 cut(s) 759, 1382
MflI RGATCY 3 cut(s) 820, 1177, 1716
MhlI GDGCHC 4 cut(s) 450, 773, 936, 1939
Mly113I GGCGCC 1 cut(s) 1886
MlyI GAGTC 3 cut(s) 908, 1232, 1440
MmeI TCCRAC 2 cut(s) 772, 918
MroI TCCGGA 1 cut(s) 1366
MroXI GAANNNNTTC 2 cut(s) 1088, 1252
MseI TTAA 6 cut(s) 533, 585, 698, 1280, 1394, 1949
MspA1I CMGCKG 1 cut(s) 776
MspI CCGG 7 cut(s) 189, 504, 589, 940, 1367, 1575, 1738
MspR9I CCNGG 4 cut(s) 505, 1409, 1668, 1898
MunI CAATTG 2 cut(s) 759, 1382
Mva1269I GAATGC 1 cut(s) 912
MvaI CCWGG 3 cut(s) 1409, 1668, 1898
MwoI GCNNNNNNNGC 3 cut(s) 99, 108, 208
NarI GGCGCC 1 cut(s) 1886
NciI CCSGG 1 cut(s) 505
NcoI CCATGG 1 cut(s) 925
NlaIV GGNNCC 6 cut(s) 502, 510, 574, 822, 1887, 1937
NmeAIII GCCGAG 1 cut(s) 100
NmuCI GTSAC 1 cut(s) 1490
NspI RCATGY 3 cut(s) 482, 865, 1643
PaeR7I CTCGAG 1 cut(s) 1682
PagI TCATGA 1 cut(s) 765
PceI AGGCCT 1 cut(s) 1212
PciI ACATGT 1 cut(s) 478
PctI GAATGC 1 cut(s) 912
PdmI GAANNNNTTC 2 cut(s) 1088, 1252
PfeI GAWTC 5 cut(s) 270, 404, 1248, 1517, 1652
PflMI CCANNNNNTGG 1 cut(s) 1562
PinAI ACCGGT 1 cut(s) 188
PkrI GCNGC 8 cut(s) 39, 113, 594, 778, 955, 1510, 1645, 1821
PleI GAGTC 3 cut(s) 907, 1232, 1440
PluTI GGCGCC 1 cut(s) 1889
PpsI GAGTC 3 cut(s) 907, 1232, 1440
PpuMI RGGWCCY 1 cut(s) 573
PscI ACATGT 1 cut(s) 478
Psp124BI GAGCTC 2 cut(s) 450, 936
Psp5II RGGWCCY 1 cut(s) 573
Psp6I CCWGG 3 cut(s) 1407, 1666, 1896
PspGI CCWGG 3 cut(s) 1407, 1666, 1896
PspN4I GGNNCC 6 cut(s) 502, 510, 574, 822, 1887, 1937
PspOMI GGGCCC 1 cut(s) 1935
PspPI GGNCC 5 cut(s) 573, 1358, 1900, 1935, 1936
PspPPI RGGWCCY 1 cut(s) 573
PspXI VCTCGAGB 1 cut(s) 1682
PsrI GAACNNNNNNTAC 2 cut(s) 1908, 1940
PstNI CAGNNNCTG 1 cut(s) 279
PsuI RGATCY 3 cut(s) 820, 1177, 1716
PvuII CAGCTG 1 cut(s) 776
RsaI GTAC 2 cut(s) 914, 968
RsaNI GTAC 2 cut(s) 913, 967
SacI GAGCTC 2 cut(s) 450, 936
SalI GTCGAC 1 cut(s) 722
SaqAI TTAA 6 cut(s) 533, 585, 698, 1280, 1394, 1949
SatI GCNGC 8 cut(s) 38, 112, 593, 777, 954, 1509, 1644, 1820
Sau96I GGNCC 5 cut(s) 573, 1358, 1900, 1935, 1936
SchI GAGTC 3 cut(s) 908, 1232, 1440
ScrFI CCNGG 4 cut(s) 505, 1409, 1668, 1898
SduI GDGCHC 4 cut(s) 450, 773, 936, 1939
SfaNI GCATC 3 cut(s) 162, 764, 823
SfoI GGCGCC 1 cut(s) 1887
Sfr274I CTCGAG 1 cut(s) 1682
SgrAI CRCCGGYG 1 cut(s) 188
SinI GGWCC 2 cut(s) 573, 1358
SlaI CTCGAG 1 cut(s) 1682
SmiI ATTTAAAT 1 cut(s) 1395
SmlI CTYRAG 3 cut(s) 1682, 1721, 1803
SmoI CTYRAG 3 cut(s) 1682, 1721, 1803
SseBI AGGCCT 1 cut(s) 1212
SsiI CCGC 3 cut(s) 111, 592, 1509
SspDI GGCGCC 1 cut(s) 1885
SspI AATATT 2 cut(s) 314, 851
SspMI CTAG 6 cut(s) 65, 957, 1094, 1442, 1505, 1919
SstI GAGCTC 2 cut(s) 450, 936
StuI AGGCCT 1 cut(s) 1212
StyD4I CCNGG 4 cut(s) 503, 1407, 1666, 1896
StyI CCWWGG 3 cut(s) 576, 925, 1257
SwaI ATTTAAAT 1 cut(s) 1395
TaaI ACNGT 2 cut(s) 721, 1774
TaiI ACGT 1 cut(s) 1140
TaqI TCGA 4 cut(s) 723, 1268, 1650, 1683
TatI WGTACW 2 cut(s) 912, 966
TauI GCSGC 3 cut(s) 114, 595, 1511
TfiI GAWTC 5 cut(s) 270, 404, 1248, 1517, 1652
Tru1I TTAA 6 cut(s) 533, 585, 698, 1280, 1394, 1949
Tru9I TTAA 6 cut(s) 533, 585, 698, 1280, 1394, 1949
TscAI CASTG 6 cut(s) 21, 142, 414, 698, 1086, 1680
TseFI GTSAC 1 cut(s) 1490
TseI GCWGC 5 cut(s) 37, 776, 953, 1643, 1819
Tsp45I GTSAC 1 cut(s) 1490
TspDTI ATGAA 8 cut(s) 85, 169, 371, 375, 424, 702, 1167, 1530
TspGWI ACGGA 1 cut(s) 501
TspRI CASTG 6 cut(s) 21, 142, 414, 698, 1086, 1680
Van91I CCANNNNNTGG 1 cut(s) 1562
VpaK11BI GGWCC 2 cut(s) 573, 1358
XapI RAATTY 5 cut(s) 124, 808, 1012, 1088, 1578
XceI RCATGY 3 cut(s) 482, 865, 1643
XhoI CTCGAG 1 cut(s) 1682
XmiI GTMKAC 1 cut(s) 723
XmnI GAANNNNTTC 2 cut(s) 1088, 1252
XspI CTAG 6 cut(s) 65, 957, 1094, 1442, 1505, 1919
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.