MD09G1199100.v1.1

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0000083
Physical Location & Seq
Forward (+)
18208865 .. 18214634
5770 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1199100.v1.1.491

Sequence Viewer

Length: 2094 bp
ATGCCTGAATACATAAACATGTATTTCCAGTCGTACAACTCTCTTAGAAGCTTCCCTGAAGGAATCCGAAACTGCTACAAAATAAATGTTACAAGTAAAACCAAGTATTTGATCAGGGCAAGTTTTTTTTATGGGAATTATGATGAACAAAATGAAGTACCCGAATTTGAGATACATCTTGGACCTCACTTGTGGGATACAGTGAACTGGTTGAGGAATTCGTTGGAAGCAGGATCTATCGAGCTCATACATGTCCCTCTGCGAAACTATGTACATGTTTGTCTGGTGAAGACTTGCTCCGGGGTTCCATTTATATCGGCTTTAGAGCTCAGGCCTTTAACCGATGCCTCGTACAAAACAGTAAACGGGTCCTTATCACTTCTCATGCGGTATGACACTGGTCTAACAGGTGACCTTTGGGCATACAGGTATCCATATGATATTCATGATCGAATCTGGAATTACTTTGCGAAGCACAGCCCTTGGACAAATTTAAATACCTCATCAACCATCAATTCAATATTCGAGTATCAACCACCATCTGTCGTGATGGGCACAGCTGCAACGCCAAATAGTTCAAATGATTCATTGAATATTTTCTGGGAGCCTTACAGTAGAGTACATCATGTTTACTTGCCCTTTGCAGAAGTTGAAAAGCTCCAACCCAACCAGTCTAGACAGCTCAACATTACTACAAACGGAGAGCTGTGTTATGGGACACTTGCTCCTGATTATTTGTCCACAACGACAATATTCTTTGAGGCTATCACAAACATCAAGTCAACCTATAATATTGAAAAGAACTGGCAAGGAGATCCTTGTAACCCTCAAGTTTACTCATGGGATGGTCTAAACTGTAGCTATCATGGAAATGATCCCCCAAGAATTATATCCTTGAACTTGTCTTCCAGTGGATTAGAAGGGGAGATTTCTCCTTCTCTGTCAAATCTAACAATGATACAGACATTGGATTTATCAAACAACAACTTAAGAGGATCAATTCTAGAAACTTTGTCACAACTGCCGACGTTAAATGTCTTAAATTTGGAGAATAACAACCTCACAGGCTCAATTCCGATGGTACTCATTGACAGATGGAAGGATGGTTTACTATCATTAAGTTTGTGCGAAAATCCAAACCTATCCAGAAATGTTTCTTGCAACAAGAAGAAGAACAGGAAGGGTAATTTTTTTGTTCCGATGGTAATTGTTTCGGTTGGTGCACTAGTGTCAGTCCTCTTACTCAGTGCAGCAGCTATCTGGTGTCCGGCTGCTTCTAAAAGGAAAAGGCAACTTGGAAATAGCACAGATGCAAATGTAACCATTCAGCATGGGTCATTTGAGCCTAAAGGGAGACAGTTTACGTACTCTGATATAGTACAGATTACAAAGGGGTTCAAGAGGGTTCTTGGAAAAGGCGGCTTTGGTACAGTATATCACGGCCACATAGACGAGGTGGCTGTCAAGATGCTTTCATCGCCATCAGTTCAAGGGTTTCAGCAATTTCTCACAGAGGCATTTGTGTCTGAATTAAAAACAGGACTGGAGTATCTGCACCATGGCTGCAAGCCGCCTATAATCAACAAGGATGTGAAATCAACAAACATCTTGCTGAATGAAAACTTCGAAACCGAACTCTCTGATTTTGGCATATCCAGATGTTTCCCTACAGAGGATGGAACACATAACAACAACTGTCGCTGGCACTCCCGGAAAGTGATATTTATAGCTTTGGGGTTGGAGATTATCACAAGTCGACCTGTTTTTTCTAGGACGCATGAGCGGAGTTACATTAGTGAATGGTTCAGTTTCATGCTTCAAAAAGGAGACATTTACAGTCTTGTTGATCCGAGGTTAGAAGGAAAATTCAATACTAACTCAGTCTGGAAAGCTGTGGAAATAGCAAATGCATGCGTATCTCCAACTGCCATCAAAAGGCTAAGCATGAGTCAGGTAGTGGTGGATCTAAAGGAGTGCTTGGCAACAGAACTCGCTCGAGCAAACCCGAGGCATGAAACTGAATTAAGAAATTCCATTGCTATGCTATACCCCTCGGTTGTTGACTTTTGTATTTTAGGTAGGATCCCTAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

698

Amino Acids

78.68

Weight (kDa)

7.0

Isoelectric Point (pI)

42.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 8 - 259 6.2e-75 Malectin-like domain
Pkinase PF00069 501 - 559 4.1e-07 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1783
AccI GTMKAC 1 cut(s) 1756
AciI CCGC 4 cut(s) 388, 1419, 1571, 1783
AclWI GGATC 8 cut(s) 241, 809, 869, 1003, 1841, 1971, 2077, 2090
AcoI YGGCCR 1 cut(s) 1441
AcsI RAATTY 6 cut(s) 164, 217, 490, 1042, 1865, 2029
AcuI CTGAAG 1 cut(s) 78
AfaI GTAC 9 cut(s) 35, 159, 273, 353, 621, 1083, 1367, 1380, 1429
AfiI CCNNNNNNNGG 2 cut(s) 1672, 1935
AflII CTTAAG 1 cut(s) 988
AflIII ACRYGT 3 cut(s) 18, 250, 274
AhlI ACTAGT 1 cut(s) 1225
AloI GAACNNNNNNTCC 2 cut(s) 890, 922
Alw21I GWGCWC 3 cut(s) 246, 330, 1225
Alw26I GTCTC 2 cut(s) 1348, 1821
Alw44I GTGCAC 1 cut(s) 1221
AlwI GGATC 8 cut(s) 241, 809, 869, 1003, 1841, 1971, 2077, 2090
Ama87I CYCGRG 2 cut(s) 1995, 2005
AoxI GGCC 2 cut(s) 332, 1441
ApaLI GTGCAC 1 cut(s) 1221
ApeKI GCWGC 5 cut(s) 560, 1250, 1253, 1271, 1563
ApoI RAATTY 6 cut(s) 164, 217, 490, 1042, 1865, 2029
ArsI GACNNNNNNTTYG 2 cut(s) 764, 796
Asp700I GAANNNNTTC 2 cut(s) 596, 1153
AspS9I GGNCC 2 cut(s) 182, 369
AsuC2I CCSGG 2 cut(s) 301, 1711
AsuHPI GGTGA 2 cut(s) 298, 422
AsuII TTCGAA 1 cut(s) 1626
AvaI CYCGRG 2 cut(s) 1995, 2005
AvaII GGWCC 2 cut(s) 182, 369
BaeGI GKGCMC 2 cut(s) 557, 1225
BaeI ACNNNNGTAYC 2 cut(s) 1532, 1565
BamHI GGATCC 1 cut(s) 2082
BanII GRGCYC 2 cut(s) 246, 330
BbsI GAAGAC 2 cut(s) 296, 897
Bbv12I GWGCWC 3 cut(s) 246, 330, 1225
BbvI GCAGC 5 cut(s) 547, 1258, 1262, 1265, 1550
BceAI ACGGC 1 cut(s) 1456
BciVI GTATCC 2 cut(s) 190, 441
BclI TGATCA 1 cut(s) 111
BcnI CCSGG 2 cut(s) 301, 1711
BcoDI GTCTC 2 cut(s) 1348, 1821
BcuI ACTAGT 1 cut(s) 1225
BfaI CTAG 4 cut(s) 675, 1004, 1226, 1770
BfmI CTRYAG 2 cut(s) 856, 1668
BfrI CTTAAG 1 cut(s) 988
BfuI GTATCC 2 cut(s) 190, 441
BisI GCNGC 7 cut(s) 561, 1251, 1254, 1272, 1420, 1564, 1571
BlpI GCTNAGC 1 cut(s) 1940
BlsI GCNGC 7 cut(s) 562, 1252, 1255, 1273, 1421, 1565, 1572
Bme1390I CCNGG 2 cut(s) 301, 1711
Bme18I GGWCC 2 cut(s) 182, 369
BmeT110I CYCGRG 2 cut(s) 1995, 2005
BmgT120I GGNCC 2 cut(s) 182, 369
BmiI GGNNCC 4 cut(s) 306, 370, 606, 2084
BmrFI CCNGG 2 cut(s) 301, 1711
BmsI GCATC 3 cut(s) 334, 1300, 1458
BoxI GACNNNNGTC 1 cut(s) 399
BpiI GAAGAC 2 cut(s) 296, 897
BpmI CTGGAG 1 cut(s) 1565
Bpu10I CCTNAGC 1 cut(s) 329
Bpu1102I GCTNAGC 1 cut(s) 1940
Bpu14I TTCGAA 1 cut(s) 1626
BpuEI CTTGAG 1 cut(s) 813
BpuMI CCSGG 2 cut(s) 301, 1711
BsaAI YACGTR 1 cut(s) 1365
BsaJI CCNNGG 6 cut(s) 300, 482, 1558, 1850, 2006, 2052
BsaXI ACNNNNNCTCC 2 cut(s) 709, 739
Bsc4I CCNNNNNNNGG 2 cut(s) 1672, 1935
Bse1I ACTGG 7 cut(s) 28, 212, 403, 670, 809, 909, 1548
Bse3DI GCAATG 1 cut(s) 2034
BseDI CCNNGG 6 cut(s) 300, 482, 1558, 1850, 2006, 2052
BseGI GGATG 4 cut(s) 850, 1108, 1594, 1681
BseLI CCNNNNNNNGG 2 cut(s) 1672, 1935
BseMI GCAATG 1 cut(s) 2034
BseMII CTCAG 3 cut(s) 343, 1258, 1893
BseNI ACTGG 7 cut(s) 28, 212, 403, 670, 809, 909, 1548
BseSI GKGCMC 2 cut(s) 557, 1225
BseXI GCAGC 5 cut(s) 547, 1258, 1262, 1265, 1550
BsgI GTGCAG 2 cut(s) 1269, 1538
BshFI GGCC 2 cut(s) 334, 1443
BsiHKAI GWGCWC 3 cut(s) 246, 330, 1225
BsiHKCI CYCGRG 2 cut(s) 1995, 2005
BsiSI CCGG 3 cut(s) 300, 1268, 1711
BslFI GGGAC 2 cut(s) 239, 730
BslI CCNNNNNNNGG 2 cut(s) 1672, 1935
BsmAI GTCTC 2 cut(s) 1348, 1821
BsmFI GGGAC 2 cut(s) 239, 730
BsnI GGCC 2 cut(s) 334, 1443
BsoBI CYCGRG 2 cut(s) 1995, 2005
Bsp119I TTCGAA 1 cut(s) 1626
Bsp1286I GDGCHC 4 cut(s) 246, 330, 557, 1225
Bsp1407I TGTACA 1 cut(s) 271
Bsp143I GATC 9 cut(s) 111, 233, 448, 814, 874, 995, 1846, 1963, 2082
Bsp1720I GCTNAGC 1 cut(s) 1940
Bsp19I CCATGG 1 cut(s) 1558
BspACI CCGC 4 cut(s) 388, 1419, 1571, 1783
BspANI GGCC 2 cut(s) 334, 1443
BspCNI CTCAG 3 cut(s) 342, 1257, 1892
BspHI TCATGA 1 cut(s) 445
BspLI GGNNCC 4 cut(s) 306, 370, 606, 2084
BspPI GGATC 8 cut(s) 241, 809, 869, 1003, 1841, 1971, 2077, 2090
BspT104I TTCGAA 1 cut(s) 1626
BspTI CTTAAG 1 cut(s) 988
BsrBI CCGCTC 1 cut(s) 1783
BsrDI GCAATG 1 cut(s) 2034
BsrGI TGTACA 1 cut(s) 271
BsrI ACTGG 7 cut(s) 28, 212, 403, 670, 809, 909, 1548
BssECI CCNNGG 6 cut(s) 300, 482, 1558, 1850, 2006, 2052
BssMI GATC 9 cut(s) 111, 233, 448, 814, 874, 995, 1846, 1963, 2082
BssT1I CCWWGG 2 cut(s) 482, 1558
Bst4CI ACNGT 8 cut(s) 202, 361, 614, 857, 1359, 1432, 1697, 1838
BstAFI CTTAAG 1 cut(s) 988
BstAUI TGTACA 1 cut(s) 271
BstBAI YACGTR 1 cut(s) 1365
BstBI TTCGAA 1 cut(s) 1626
BstC8I GCNNGC 3 cut(s) 1568, 1703, 1912
BstDEI CTNAG 5 cut(s) 44, 329, 1244, 1879, 1940
BstDSI CCRYGG 1 cut(s) 1558
BstEII GGTNACC 1 cut(s) 410
BstF5I GGATG 4 cut(s) 850, 1108, 1594, 1681
BstKTI GATC 9 cut(s) 114, 236, 451, 817, 877, 998, 1849, 1966, 2085
BstMAI GTCTC 2 cut(s) 1348, 1821
BstMBI GATC 9 cut(s) 111, 233, 448, 814, 874, 995, 1846, 1963, 2082
BstMWI GCNNNNNNNGC 1 cut(s) 1477
BstNSI RCATGY 4 cut(s) 22, 254, 278, 1914
BstPAI GACNNNNGTC 1 cut(s) 399
BstPI GGTNACC 1 cut(s) 410
BstSCI CCNGG 2 cut(s) 299, 1709
BstSFI CTRYAG 2 cut(s) 856, 1668
BstSLI GKGCMC 2 cut(s) 557, 1225
BstSNI TACGTA 1 cut(s) 1365
BstV1I GCAGC 5 cut(s) 547, 1258, 1262, 1265, 1550
BstV2I GAAGAC 2 cut(s) 296, 897
BstX2I RGATCY 4 cut(s) 233, 814, 1963, 2082
BstYI RGATCY 4 cut(s) 233, 814, 1963, 2082
BsuI GTATCC 2 cut(s) 190, 441
BsuRI GGCC 2 cut(s) 334, 1443
BtgI CCRYGG 1 cut(s) 1558
BtgZI GCGATG 1 cut(s) 1461
BtsCI GGATG 4 cut(s) 850, 1108, 1594, 1681
BtsIMutI CAGTG 4 cut(s) 207, 396, 916, 1252
Cac8I GCNNGC 3 cut(s) 1568, 1703, 1912
CciI TCATGA 1 cut(s) 445
Cfr13I GGNCC 2 cut(s) 182, 369
CseI GACGC 1 cut(s) 1783
Csp6I GTAC 9 cut(s) 34, 158, 272, 352, 620, 1082, 1366, 1379, 1428
CviQI GTAC 9 cut(s) 34, 158, 272, 352, 620, 1082, 1366, 1379, 1428
DdeI CTNAG 5 cut(s) 44, 329, 1244, 1879, 1940
DpnI GATC 9 cut(s) 113, 235, 450, 816, 876, 997, 1848, 1965, 2084
DpnII GATC 9 cut(s) 111, 233, 448, 814, 874, 995, 1846, 1963, 2082
DraI TTTAAA 1 cut(s) 495
EaeI YGGCCR 1 cut(s) 1441
Ecl136II GAGCTC 2 cut(s) 244, 328
Eco105I TACGTA 1 cut(s) 1365
Eco130I CCWWGG 2 cut(s) 482, 1558
Eco147I AGGCCT 1 cut(s) 334
Eco24I GRGCYC 2 cut(s) 246, 330
Eco47I GGWCC 2 cut(s) 182, 369
Eco53kI GAGCTC 2 cut(s) 244, 328
Eco57I CTGAAG 1 cut(s) 78
Eco88I CYCGRG 2 cut(s) 1995, 2005
Eco91I GGTNACC 1 cut(s) 410
EcoICRI GAGCTC 2 cut(s) 244, 328
EcoO109I RGGNCCY 1 cut(s) 369
EcoO65I GGTNACC 1 cut(s) 410
EcoRI GAATTC 1 cut(s) 217
EcoT14I CCWWGG 2 cut(s) 482, 1558
EcoT22I ATGCAT 1 cut(s) 1912
EcoT38I GRGCYC 2 cut(s) 246, 330
ErhI CCWWGG 2 cut(s) 482, 1558
FalI AAGNNNNNCTT 2 cut(s) 1961, 1993
FaqI GGGAC 2 cut(s) 239, 730
FauNDI CATATG 1 cut(s) 436
FbaI TGATCA 1 cut(s) 111
FblI GTMKAC 1 cut(s) 1756
Fnu4HI GCNGC 7 cut(s) 561, 1251, 1254, 1272, 1420, 1564, 1571
FokI GGATG 4 cut(s) 857, 1115, 1601, 1688
FriOI GRGCYC 2 cut(s) 246, 330
Fsp4HI GCNGC 7 cut(s) 561, 1251, 1254, 1272, 1420, 1564, 1571
FspBI CTAG 4 cut(s) 675, 1004, 1226, 1770
GluI GCNGC 7 cut(s) 561, 1251, 1254, 1272, 1420, 1564, 1571
GsuI CTGGAG 1 cut(s) 1565
HaeIII GGCC 2 cut(s) 334, 1443
HapII CCGG 3 cut(s) 300, 1268, 1711
HgaI GACGC 1 cut(s) 1783
HincII GTYRAC 3 cut(s) 783, 1757, 2062
HindII GTYRAC 3 cut(s) 783, 1757, 2062
HindIII AAGCTT 1 cut(s) 49
HinfI GANTC 4 cut(s) 63, 453, 584, 1948
HpaII CCGG 3 cut(s) 300, 1268, 1711
HphI GGTGA 2 cut(s) 298, 422
Hpy188I TCNGA 7 cut(s) 68, 1077, 1200, 1372, 1528, 1642, 1851
Hpy99I CGWCG 1 cut(s) 1030
HpyAV CCTTC 6 cut(s) 53, 914, 945, 1093, 1174, 1853
HpyCH4III ACNGT 8 cut(s) 202, 361, 614, 857, 1359, 1432, 1697, 1838
HpyCH4IV ACGT 2 cut(s) 1028, 1364
HpyCH4V TGCA 9 cut(s) 563, 644, 1161, 1223, 1250, 1313, 1555, 1566, 1910
HpyF10VI GCNNNNNNNGC 1 cut(s) 1477
HpyF3I CTNAG 5 cut(s) 44, 329, 1244, 1879, 1940
HpySE526I ACGT 2 cut(s) 1028, 1364
Ksp22I TGATCA 1 cut(s) 111
Kzo9I GATC 9 cut(s) 111, 233, 448, 814, 874, 995, 1846, 1963, 2082
LmnI GCTCC 4 cut(s) 302, 604, 663, 730
Lsp1109I GCAGC 5 cut(s) 547, 1258, 1262, 1265, 1550
LweI GCATC 3 cut(s) 334, 1300, 1458
MaeI CTAG 4 cut(s) 675, 1004, 1226, 1770
MaeII ACGT 2 cut(s) 1028, 1364
MaeIII GTNAC 6 cut(s) 88, 410, 821, 1014, 1318, 1787
MalI GATC 9 cut(s) 113, 235, 450, 816, 876, 997, 1848, 1965, 2084
MbiI CCGCTC 1 cut(s) 1783
MboI GATC 9 cut(s) 111, 233, 448, 814, 874, 995, 1846, 1963, 2082
MboII GAAGA 4 cut(s) 301, 897, 1180, 1183
MflI RGATCY 4 cut(s) 233, 814, 1963, 2082
MhlI GDGCHC 4 cut(s) 246, 330, 557, 1225
MlyI GAGTC 1 cut(s) 1957
MmeI TCCRAC 4 cut(s) 204, 685, 1719, 1946
Mph1103I ATGCAT 1 cut(s) 1912
MroXI GAANNNNTTC 2 cut(s) 596, 1153
MseI TTAA 8 cut(s) 338, 494, 989, 1031, 1040, 1118, 1532, 2024
MslI CAYNNNNRTG 3 cut(s) 17, 870, 2039
MspA1I CMGCKG 1 cut(s) 560
MspCI CTTAAG 1 cut(s) 988
MspI CCGG 3 cut(s) 300, 1268, 1711
MspR9I CCNGG 2 cut(s) 301, 1711
MwoI GCNNNNNNNGC 1 cut(s) 1477
NciI CCSGG 2 cut(s) 301, 1711
NcoI CCATGG 1 cut(s) 1558
NdeI CATATG 1 cut(s) 436
NdeII GATC 9 cut(s) 111, 233, 448, 814, 874, 995, 1846, 1963, 2082
NlaIV GGNNCC 4 cut(s) 306, 370, 606, 2084
NmuCI GTSAC 2 cut(s) 410, 1014
NsiI ATGCAT 1 cut(s) 1912
NspI RCATGY 4 cut(s) 22, 254, 278, 1914
NspV TTCGAA 1 cut(s) 1626
PaeI GCATGC 1 cut(s) 1914
PaeR7I CTCGAG 1 cut(s) 1995
PagI TCATGA 1 cut(s) 445
PceI AGGCCT 1 cut(s) 334
PciI ACATGT 3 cut(s) 18, 250, 274
PdmI GAANNNNTTC 2 cut(s) 596, 1153
PfeI GAWTC 3 cut(s) 63, 453, 584
PfoI TCCNGGA 1 cut(s) 1709
PkrI GCNGC 7 cut(s) 562, 1252, 1255, 1273, 1421, 1565, 1572
PleI GAGTC 1 cut(s) 1956
PpsI GAGTC 1 cut(s) 1956
Ppu21I YACGTR 1 cut(s) 1365
PpuMI RGGWCCY 1 cut(s) 369
PscI ACATGT 3 cut(s) 18, 250, 274
PshAI GACNNNNGTC 1 cut(s) 399
Psp124BI GAGCTC 2 cut(s) 246, 330
Psp5II RGGWCCY 1 cut(s) 369
PspEI GGTNACC 1 cut(s) 410
PspN4I GGNNCC 4 cut(s) 306, 370, 606, 2084
PspPI GGNCC 2 cut(s) 182, 369
PspPPI RGGWCCY 1 cut(s) 369
PspXI VCTCGAGB 1 cut(s) 1995
PsuI RGATCY 4 cut(s) 233, 814, 1963, 2082
PvuII CAGCTG 1 cut(s) 560
RsaI GTAC 9 cut(s) 35, 159, 273, 353, 621, 1083, 1367, 1380, 1429
RsaNI GTAC 9 cut(s) 34, 158, 272, 352, 620, 1082, 1366, 1379, 1428
RseI CAYNNNNRTG 3 cut(s) 17, 870, 2039
SacI GAGCTC 2 cut(s) 246, 330
SalI GTCGAC 1 cut(s) 1755
SaqAI TTAA 8 cut(s) 338, 494, 989, 1031, 1040, 1118, 1532, 2024
SatI GCNGC 7 cut(s) 561, 1251, 1254, 1272, 1420, 1564, 1571
Sau3AI GATC 9 cut(s) 111, 233, 448, 814, 874, 995, 1846, 1963, 2082
Sau96I GGNCC 2 cut(s) 182, 369
SchI GAGTC 1 cut(s) 1957
ScrFI CCNGG 2 cut(s) 301, 1711
SduI GDGCHC 4 cut(s) 246, 330, 557, 1225
SfaNI GCATC 3 cut(s) 334, 1300, 1458
SfcI CTRYAG 2 cut(s) 856, 1668
Sfr274I CTCGAG 1 cut(s) 1995
SfuI TTCGAA 1 cut(s) 1626
SinI GGWCC 2 cut(s) 182, 369
SlaI CTCGAG 1 cut(s) 1995
SmiI ATTTAAAT 1 cut(s) 495
SmiMI CAYNNNNRTG 3 cut(s) 17, 870, 2039
SmlI CTYRAG 3 cut(s) 828, 988, 1995
SmoI CTYRAG 3 cut(s) 828, 988, 1995
SnaBI TACGTA 1 cut(s) 1365
SpeI ACTAGT 1 cut(s) 1225
SphI GCATGC 1 cut(s) 1914
SseBI AGGCCT 1 cut(s) 334
SsiI CCGC 4 cut(s) 388, 1419, 1571, 1783
SspI AATATT 4 cut(s) 522, 595, 753, 793
SspMI CTAG 4 cut(s) 675, 1004, 1226, 1770
SstI GAGCTC 2 cut(s) 246, 330
StuI AGGCCT 1 cut(s) 334
StyD4I CCNGG 2 cut(s) 299, 1709
StyI CCWWGG 2 cut(s) 482, 1558
SwaI ATTTAAAT 1 cut(s) 495
TaaI ACNGT 8 cut(s) 202, 361, 614, 857, 1359, 1432, 1697, 1838
TaiI ACGT 2 cut(s) 1031, 1367
TaqI TCGA 6 cut(s) 240, 451, 525, 1626, 1756, 1996
TatI WGTACW 3 cut(s) 271, 619, 1378
TauI GCSGC 2 cut(s) 1422, 1573
TfiI GAWTC 3 cut(s) 63, 453, 584
Tru1I TTAA 8 cut(s) 338, 494, 989, 1031, 1040, 1118, 1532, 2024
Tru9I TTAA 8 cut(s) 338, 494, 989, 1031, 1040, 1118, 1532, 2024
TscAI CASTG 4 cut(s) 207, 403, 916, 1252
TseFI GTSAC 2 cut(s) 410, 1014
TseI GCWGC 5 cut(s) 560, 1250, 1253, 1271, 1563
Tsp45I GTSAC 2 cut(s) 410, 1014
TspDTI ATGAA 8 cut(s) 159, 168, 434, 576, 1464, 1632, 1801, 2028
TspGWI ACGGA 1 cut(s) 714
TspRI CASTG 4 cut(s) 207, 403, 916, 1252
Vha464I CTTAAG 1 cut(s) 988
VneI GTGCAC 1 cut(s) 1221
VpaK11BI GGWCC 2 cut(s) 182, 369
XapI RAATTY 6 cut(s) 164, 217, 490, 1042, 1865, 2029
XbaI TCTAGA 2 cut(s) 674, 1003
XceI RCATGY 4 cut(s) 22, 254, 278, 1914
XhoI CTCGAG 1 cut(s) 1995
XmiI GTMKAC 1 cut(s) 1756
XmnI GAANNNNTTC 2 cut(s) 596, 1153
XspI CTAG 4 cut(s) 675, 1004, 1226, 1770
Zsp2I ATGCAT 1 cut(s) 1912
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.