AT5G59670

leucine-rich repeat protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0000083
Physical Location & Seq
Forward (+)
24041131 .. 24045666
4536 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G59670.1

Sequence Viewer

Length: 2607 bp
ATGGAGAGTTCTTTTGGGCTTTTGTTGGCACTGTTAACTTTGACCATCATTCATATTGTTCAAGCTCAAGACCCACAAGGGTTCATCAGTTTGGATTGCGGGCTACCCGCAAATGAGACGTCTCCTTATACAGAGACTCAAACTGGTCTGTTGTTCTCTTCGGACGCAACATTCATCCAGAGCGGAAAAACTGGTAGAGTCCAAGCAAATCAAGAGAGTAAATTCTTGAAGCCATACAGAACGCTGAGATATTTCCCAGAGGGAGTACGGAATTGCTACAATCTGAGTGTGTTCAAGGAGCGTAAATATTTGATCGCTGCTAGTTTTTTATATGGAAATTACGATGGTCATAACATAGCCCCTGTGTTTGATCTTTATCTTGGACCAAATTTATGGGCGAAAATAGATTTACAAGATGTGAATGGTACAGGGGAAGAGATCTTACACATCCCAACATCGAACTCGTTGCAGATATGTCTTGTTCAGACTGGGGAAACTACACCGCTGATATCCTCTTTGGAATTACGGCCAATGAGAACTGGAAGCTATACCACTGTGTCTGGTTCCCTGAAAACATACAGGCGTTTATATTTTAAAAAGTCTGGATCTAGGCTACGGTACAGTAAAGATGTTTATGATCGCTCATGGTTTCCGCGCTTCATGGACGAATGGACCCAGATTTCCACTGCTCTCGGGGTGATTAATACCAACATCTACCAACCACCGGAAGATGCGCTGAAAAATGCTGCCACGCCTACTGATGCTAGTGCGCCACTGACATTTAAATGGAATTCAGAAAAATTGGATGTCCAATATTACTTTTACGCACACTATGCTGAGATCCAAGACTTGCAGGCAAATGATACCAGAGAATTCAACATCTTATTGAATGGACAAAATTTATCTGTGACTGGCCCTGAAGTCCCAGATAAGCTAAGTATAAAGACCTTCCAAAGCTCGTCACCGATAAGTTGCAATGGATGGGCATGTAATTTTCAGCTGATAAGAACCAAAAGATCAACTCTTCCACCTCTACTTAATGCTTTGGAAGTCTACACAGTTATTCAGTTTCCACGGTCCGAAACAGATGAAAGCGACGTGGTTGCTATGAAAAACATCTCAGCCAGCTATGGATTGAGTAGAATCAACTGGCAAGGCGATCCATGCTTCCCTCAGCAGCTTAGGTGGGACGCTTTAGACTGCACCAACAGAAATATCTCCCAACCACCAAGAATCACTTCTTTAAACTTGTCTTCAAGTCGTTTAAATGGAACCATAGCAGCTGCCATTCAAAGTATTACACAACTTGAAACACTGGACTTGTCGTATAATAACTTAACTGGAGAGGTGCCAGAGTTTCTTGGCAAAATGAAATCGTTGTCGGTCATAAACTTAAGCGGGAACAATCTTAATGGTTCAATTCCGCAAGCTCTTCGAAAGAAAAGACTAAAACTATACCTTGAAGGAAACCCAAGGCTTATAAAACCACCTAAGAAGGAATTTCCTGTGGCAATTGTTACATTAGTTGTTTTTGTCACAGTCATTGTGGTTCTTTTTCTTGTTTTCAGAAAGAAAATGTCCACGATTGTAAAAGGTCTACGCCTGCCACCAAGGACATCAATGGTGGATGTTACATTTTCTAATAAAAAAAGCAAAAGGTTCACATATTCAGAGGTCGTCCAAGTGACAAAGAACTTCCAAAGAGTTTTAGGTAAAGGAGGGTTCGGCATGGTCTATCACGGTACTGTAAAGGGTTCTGAACAGGTGGCCGTTAAGGTTCTCTCTCAATCGTCAACTCAAGGCTCTAAGGAGTTCAAAGCAGAGGTTGATCTCCTTCTGAGAGTGCACCATACAAATTTGGTGAGCCTGGTTGGGTATTGCTGTGAAGGAGATTACTTGGCCCTCGTCTATGAGTTTCTTCCCAATGGAGACTTAAAACAACATTTGTCAGGAAAAGGAGGTAATTCCATCATCAACTGGAGTATTCGACTGCGAATAGCTTTGGAAGCAGCACTAGGTTTGGAGTACTTGCATATTGGATGCACACCACCGATGGTTCATAGAGATGTCAAAACTGCCAACATATTGCTCGACGAGAATTTTAAGGCCAAACTCGCTGATTTTGGTCTTTCAAGATCTTTCCAAGGTGAAGGCGAATCTCAGGAATCGACAACAATTGCTGGTACTCTTGGATACCTTGATCCCGAATGTTACCATTCAGGTCGATTGGGTGAGAAGAGTGATGTCTACAGTTTCGGGATCGTGTTATTGGAGATGATCACAAACCAACCAGTGATCAATCAAACCTCGGGAGATTCTCACATAACACAATGGGTTGGCTTTCAGATGAACCGAGGTGATATTCTTGAGATTATGGATCCAAACCTTCGCAAGGATTATAACATTAATTCTGCCTGGAGAGCTTTGGAACTGGCAATGTCATGCGCGTATCCTTCTTCCTCAAAACGACCATCCATGTCTCAGGTTATACACGAGCTGAAAGAGTGTATTGCGTGTGAAAACACAGGGATAAGTAAGAATCGAAGCTTGGAATATCAAGAAATGAACGTTAGCTTGGACACTACGGCGGTTCCCATGGCAAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001653 GO:0002229 GO:0002237 GO:0002238 GO:0002239 GO:0002376 GO:0002831 GO:0002832 GO:0002833 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009787 GO:0009788 GO:0009790 GO:0009791 GO:0009793 GO:0009845 GO:0009888 GO:0009960 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010154 GO:0010200 GO:0010243 GO:0010646 GO:0010648 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0023051 GO:0023052 GO:0023057 GO:0031347 GO:0031348 GO:0031349 GO:0032101 GO:0032102 GO:0032103 GO:0032501 GO:0032502 GO:0032879 GO:0036211 GO:0038023 GO:0042221 GO:0042493 GO:0042802 GO:0042803 GO:0042995 GO:0043170 GO:0043207 GO:0043412 GO:0043900 GO:0043901 GO:0043902 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0046777 GO:0046983 GO:0048316 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0061458 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0090351 GO:0090406 GO:0098542 GO:0120025 GO:0140096 GO:1900150 GO:1900424 GO:1900426 GO:1901419 GO:1901420 GO:1901564 GO:1901698 GO:1901700 GO:1902288 GO:1902289 GO:1905957 GO:1905958 GO:2000071
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

868

Amino Acids

97.03

Weight (kDa)

8.52

Isoelectric Point (pI)

41.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 31 - 354 5.6e-121 Malectin-like domain
LRR_8 PF13855 410 - 470 2.4e-08 Leucine rich repeat
LRR_4 PF12799 434 - 475 1.3e-07 Leucine Rich repeats (2 copies)
PK_Tyr_Ser-Thr PF07714 566 - 833 7.5e-48 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 567 - 831 3.2e-45 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1481, 2400
AatII GACGTC 1 cut(s) 122
AccB1I GGYRCC 1 cut(s) 1348
AccBSI CCGCTC 1 cut(s) 183
AccI GTMKAC 3 cut(s) 1053, 1597, 2247
AccII CGCG 2 cut(s) 655, 2447
AciI CCGC 8 cut(s) 99, 108, 183, 503, 653, 1398, 1424, 2588
AclI AACGTT 1 cut(s) 2568
AclWI GGATC 7 cut(s) 613, 835, 1154, 2195, 2267, 2372, 2385
AcoI YGGCCR 2 cut(s) 527, 1767
AcsI RAATTY 8 cut(s) 221, 388, 790, 872, 898, 1499, 1855, 2098
AcuI CTGAAG 1 cut(s) 939
AcyI GRCGYC 1 cut(s) 119
AfaI GTAC 6 cut(s) 267, 427, 620, 1744, 2027, 2185
AfiI CCNNNNNNNGG 2 cut(s) 724, 2392
AflII CTTAAG 1 cut(s) 1393
AjiI CACGTC 1 cut(s) 1099
AjnI CCWGG 2 cut(s) 1866, 2414
AjuI GAANNNNNNNTTGG 6 cut(s) 1222, 1254, 2531, 2558, 2563, 2590
Alw21I GWGCWC 1 cut(s) 1848
Alw26I GTCTC 5 cut(s) 110, 126, 128, 1923, 2484
Alw44I GTGCAC 1 cut(s) 1844
AlwI GGATC 7 cut(s) 613, 835, 1154, 2195, 2267, 2372, 2385
Ama87I CYCGRG 2 cut(s) 692, 2308
AoxI GGCC 5 cut(s) 527, 913, 1767, 1899, 2106
ApaLI GTGCAC 1 cut(s) 1844
ApeKI GCWGC 6 cut(s) 317, 746, 1177, 1280, 1283, 2009
ApoI RAATTY 8 cut(s) 221, 388, 790, 872, 898, 1499, 1855, 2098
ArsI GACNNNNNNTTYG 2 cut(s) 104, 136
AseI ATTAAT 2 cut(s) 702, 2406
Asp700I GAANNNNTTC 1 cut(s) 1237
AspLEI GCGC 4 cut(s) 657, 736, 772, 2447
AspS9I GGNCC 5 cut(s) 383, 672, 914, 1077, 1900
AsuHPI GGTGA 6 cut(s) 709, 954, 1873, 2159, 2243, 2369
AsuII TTCGAA 1 cut(s) 1435
AvaI CYCGRG 2 cut(s) 692, 2308
AvaII GGWCC 3 cut(s) 383, 672, 1077
BaeGI GKGCMC 1 cut(s) 1848
BamHI GGATCC 1 cut(s) 2377
BanI GGYRCC 1 cut(s) 1348
BarI GAAGNNNNNNTAC 2 cut(s) 426, 458
BauI CACGAG 1 cut(s) 2492
BbsI GAAGAC 1 cut(s) 1245
Bbv12I GWGCWC 1 cut(s) 1848
BbvCI CCTCAGC 1 cut(s) 1173
BbvI GCAGC 6 cut(s) 304, 733, 1189, 1270, 1292, 2021
BccI CCATC 6 cut(s) 53, 338, 975, 1976, 2047, 2479
BceAI ACGGC 3 cut(s) 542, 1754, 2601
BcgI CGANNNNNNTGC 6 cut(s) 448, 482, 1085, 1119, 1415, 1449
BciT130I CCWGG 2 cut(s) 1868, 2416
BciVI GTATCC 2 cut(s) 2186, 2460
BclI TGATCA 2 cut(s) 2277, 2295
BcoDI GTCTC 5 cut(s) 110, 126, 128, 1923, 2484
BfaI CTAG 4 cut(s) 321, 609, 765, 2015
BfmI CTRYAG 1 cut(s) 2248
BfrI CTTAAG 1 cut(s) 1393
BfuI GTATCC 2 cut(s) 2186, 2460
BglII AGATCT 2 cut(s) 438, 2135
BisI GCNGC 6 cut(s) 318, 747, 1178, 1281, 1284, 2010
BlsI GCNGC 6 cut(s) 319, 748, 1179, 1282, 1285, 2011
BmcAI AGTACT 1 cut(s) 2027
Bme1390I CCNGG 2 cut(s) 1868, 2416
Bme18I GGWCC 3 cut(s) 383, 672, 1077
BmeT110I CYCGRG 2 cut(s) 692, 2308
BmgBI CACGTC 1 cut(s) 1099
BmgT120I GGNCC 5 cut(s) 383, 672, 914, 1077, 1900
BmiI GGNNCC 6 cut(s) 565, 674, 1273, 1350, 2379, 2592
BmrFI CCNGG 2 cut(s) 1868, 2416
BmrI ACTGGG 1 cut(s) 498
BmsI GCATC 3 cut(s) 721, 751, 2030
BmuI ACTGGG 1 cut(s) 498
BpiI GAAGAC 1 cut(s) 1245
BpmI CTGGAG 3 cut(s) 1362, 1999, 2437
Bpu10I CCTNAGC 2 cut(s) 1173, 1181
Bpu14I TTCGAA 1 cut(s) 1435
BpuEI CTTGAG 3 cut(s) 51, 1782, 2387
BsaBI GATNNNNATC 1 cut(s) 375
BsaHI GRCGYC 1 cut(s) 119
BsaJI CCNNGG 7 cut(s) 1073, 1472, 1610, 2143, 2307, 2353, 2595
BsaWI WCCGGW 1 cut(s) 724
Bsc4I CCNNNNNNNGG 2 cut(s) 724, 2392
Bse3DI GCAATG 2 cut(s) 982, 2442
Bse8I GATNNNNATC 1 cut(s) 375
BseBI CCWGG 2 cut(s) 1868, 2416
BseDI CCNNGG 7 cut(s) 1073, 1472, 1610, 2143, 2307, 2353, 2595
BseGI GGATG 7 cut(s) 174, 447, 811, 986, 1633, 2045, 2471
BseJI GATNNNNATC 1 cut(s) 375
BseLI CCNNNNNNNGG 2 cut(s) 724, 2392
BseMI GCAATG 2 cut(s) 982, 2442
BseMII CTCAG 8 cut(s) 236, 275, 828, 1134, 1187, 1829, 2174, 2495
BseSI GKGCMC 1 cut(s) 1848
BseXI GCAGC 6 cut(s) 304, 733, 1189, 1270, 1292, 2021
BsgI GTGCAG 1 cut(s) 1186
Bsh1236I CGCG 2 cut(s) 655, 2447
BshFI GGCC 5 cut(s) 529, 915, 1769, 1901, 2108
BshNI GGYRCC 1 cut(s) 1348
BsiHKAI GWGCWC 1 cut(s) 1848
BsiHKCI CYCGRG 2 cut(s) 692, 2308
BsiSI CCGG 1 cut(s) 725
BslFI GGGAC 2 cut(s) 908, 1202
BslI CCNNNNNNNGG 2 cut(s) 724, 2392
BsmAI GTCTC 5 cut(s) 110, 126, 128, 1923, 2484
BsmBI CGTCTC 2 cut(s) 110, 126
BsmFI GGGAC 2 cut(s) 908, 1202
BsnI GGCC 5 cut(s) 529, 915, 1769, 1901, 2108
BsoBI CYCGRG 2 cut(s) 692, 2308
Bsp119I TTCGAA 1 cut(s) 1435
Bsp1286I GDGCHC 1 cut(s) 1848
Bsp19I CCATGG 1 cut(s) 2595
BspACI CCGC 8 cut(s) 99, 108, 183, 503, 653, 1398, 1424, 2588
BspANI GGCC 5 cut(s) 529, 915, 1769, 1901, 2108
BspCNI CTCAG 8 cut(s) 237, 276, 829, 1133, 1186, 1830, 2173, 2494
BspFNI CGCG 2 cut(s) 655, 2447
BspLI GGNNCC 6 cut(s) 565, 674, 1273, 1350, 2379, 2592
BspPI GGATC 7 cut(s) 613, 835, 1154, 2195, 2267, 2372, 2385
BspQI GCTCTTC 1 cut(s) 1437
BspT104I TTCGAA 1 cut(s) 1435
BspT107I GGYRCC 1 cut(s) 1348
BspTI CTTAAG 1 cut(s) 1393
BsrBI CCGCTC 1 cut(s) 183
BsrDI GCAATG 2 cut(s) 982, 2442
BssECI CCNNGG 7 cut(s) 1073, 1472, 1610, 2143, 2307, 2353, 2595
BssNI GRCGYC 1 cut(s) 119
BssSI CACGAG 1 cut(s) 2492
BssT1I CCWWGG 4 cut(s) 1472, 1610, 2143, 2595
Bst2BI CACGAG 1 cut(s) 2492
Bst2UI CCWGG 2 cut(s) 1868, 2416
Bst6I CTCTTC 5 cut(s) 163, 429, 1029, 1437, 2231
BstACI GRCGYC 1 cut(s) 119
BstAFI CTTAAG 1 cut(s) 1393
BstAPI GCANNNNNTGC 1 cut(s) 833
BstBI TTCGAA 1 cut(s) 1435
BstC8I GCNNGC 5 cut(s) 101, 855, 1126, 1428, 1604
BstDSI CCRYGG 2 cut(s) 1073, 2595
BstENI CCTNNNNNAGG 1 cut(s) 2390
BstF5I GGATG 7 cut(s) 174, 447, 811, 986, 1633, 2045, 2471
BstFNI CGCG 2 cut(s) 655, 2447
BstHHI GCGC 4 cut(s) 657, 736, 772, 2447
BstMAI GTCTC 5 cut(s) 110, 126, 128, 1923, 2484
BstMWI GCNNNNNNNGC 5 cut(s) 833, 1164, 2006, 2114, 2420
BstNI CCWGG 2 cut(s) 1868, 2416
BstNSI RCATGY 1 cut(s) 990
BstSCI CCNGG 2 cut(s) 1866, 2414
BstSFI CTRYAG 1 cut(s) 2248
BstSLI GKGCMC 1 cut(s) 1848
BstUI CGCG 2 cut(s) 655, 2447
BstV1I GCAGC 6 cut(s) 304, 733, 1189, 1270, 1292, 2021
BstV2I GAAGAC 1 cut(s) 1245
BstX2I RGATCY 5 cut(s) 438, 605, 840, 2135, 2377
BstXI CCANNNNNNTGG 1 cut(s) 393
BstYI RGATCY 5 cut(s) 438, 605, 840, 2135, 2377
BsuI GTATCC 2 cut(s) 2186, 2460
BsuRI GGCC 5 cut(s) 529, 915, 1769, 1901, 2108
BtgI CCRYGG 2 cut(s) 1073, 2595
BtrI CACGTC 1 cut(s) 1099
BtsCI GGATG 7 cut(s) 174, 447, 811, 986, 1633, 2045, 2471
BtsI GCAGTG 1 cut(s) 684
BtsIMutI CAGTG 6 cut(s) 29, 552, 684, 773, 1313, 2298
Cac8I GCNNGC 5 cut(s) 101, 855, 1126, 1428, 1604
CfoI GCGC 4 cut(s) 657, 736, 772, 2447
Cfr13I GGNCC 5 cut(s) 383, 672, 914, 1077, 1900
CpoI CGGWCCG 1 cut(s) 1077
CseI GACGC 2 cut(s) 173, 1199
Csp6I GTAC 6 cut(s) 266, 426, 619, 1743, 2026, 2184
CspI CGGWCCG 1 cut(s) 1077
CviAII CATG 8 cut(s) 645, 661, 987, 1164, 1729, 2442, 2476, 2596
CviQI GTAC 6 cut(s) 266, 426, 619, 1743, 2026, 2184
DraI TTTAAA 4 cut(s) 595, 784, 1245, 1266
EaeI YGGCCR 2 cut(s) 527, 1767
Eam1104I CTCTTC 5 cut(s) 163, 429, 1029, 1437, 2231
EarI CTCTTC 5 cut(s) 163, 429, 1029, 1437, 2231
Eco130I CCWWGG 4 cut(s) 1472, 1610, 2143, 2595
Eco32I GATATC 1 cut(s) 510
Eco47I GGWCC 3 cut(s) 383, 672, 1077
Eco57I CTGAAG 1 cut(s) 939
Eco88I CYCGRG 2 cut(s) 692, 2308
EcoNI CCTNNNNNAGG 1 cut(s) 2390
EcoRI GAATTC 2 cut(s) 790, 872
EcoRII CCWGG 2 cut(s) 1866, 2414
EcoRV GATATC 1 cut(s) 510
EcoT14I CCWWGG 4 cut(s) 1472, 1610, 2143, 2595
ErhI CCWWGG 4 cut(s) 1472, 1610, 2143, 2595
Esp3I CGTCTC 2 cut(s) 110, 126
FaeI CATG 8 cut(s) 648, 664, 990, 1167, 1732, 2445, 2479, 2599
FalI AAGNNNNNCTT 2 cut(s) 1222, 1254
FaqI GGGAC 2 cut(s) 908, 1202
FatI CATG 8 cut(s) 644, 660, 986, 1163, 1728, 2441, 2475, 2595
FauI CCCGC 3 cut(s) 92, 115, 1391
FbaI TGATCA 2 cut(s) 2277, 2295
FblI GTMKAC 3 cut(s) 1053, 1597, 2247
Fnu4HI GCNGC 6 cut(s) 318, 747, 1178, 1281, 1284, 2010
FokI GGATG 7 cut(s) 161, 434, 818, 993, 1640, 2052, 2458
Fsp4HI GCNGC 6 cut(s) 318, 747, 1178, 1281, 1284, 2010
FspBI CTAG 4 cut(s) 321, 609, 765, 2015
GlaI GCGC 4 cut(s) 656, 735, 771, 2446
GluI GCNGC 6 cut(s) 318, 747, 1178, 1281, 1284, 2010
GsuI CTGGAG 3 cut(s) 1362, 1999, 2437
HaeIII GGCC 5 cut(s) 529, 915, 1769, 1901, 2108
HapII CCGG 1 cut(s) 725
HgaI GACGC 2 cut(s) 173, 1199
HhaI GCGC 4 cut(s) 657, 736, 772, 2447
Hin1I GRCGYC 1 cut(s) 119
Hin1II CATG 8 cut(s) 648, 664, 990, 1167, 1732, 2445, 2479, 2599
Hin6I GCGC 4 cut(s) 655, 734, 770, 2445
HinP1I GCGC 4 cut(s) 655, 734, 770, 2445
HincII GTYRAC 2 cut(s) 36, 1794
HindII GTYRAC 2 cut(s) 36, 1794
HindIII AAGCTT 1 cut(s) 2545
HinfI GANTC 8 cut(s) 136, 198, 1143, 1233, 2156, 2165, 2315, 2539
HpaI GTTAAC 1 cut(s) 36
HpaII CCGG 1 cut(s) 725
HphI GGTGA 6 cut(s) 709, 954, 1873, 2159, 2243, 2369
Hpy166II GTNNAC 8 cut(s) 36, 1054, 1581, 1598, 1662, 1794, 1846, 2248
Hpy8I GTNNAC 8 cut(s) 36, 1054, 1581, 1598, 1662, 1794, 1846, 2248
Hpy99I CGWCG 2 cut(s) 1100, 2096
HpyAV CCTTC 8 cut(s) 958, 1457, 1489, 1844, 1880, 2144, 2396, 2463
HpyCH4IV ACGT 3 cut(s) 119, 1098, 2568
HpyCH4V TGCA 7 cut(s) 469, 853, 975, 1203, 1846, 2032, 2043
HpyF10VI GCNNNNNNNGC 5 cut(s) 833, 1164, 2006, 2114, 2420
HpySE526I ACGT 3 cut(s) 119, 1098, 2568
Hsp92I GRCGYC 1 cut(s) 119
Hsp92II CATG 8 cut(s) 648, 664, 990, 1167, 1732, 2445, 2479, 2599
HspAI GCGC 4 cut(s) 655, 734, 770, 2445
Ksp22I TGATCA 2 cut(s) 2277, 2295
KspAI GTTAAC 1 cut(s) 36
LguI GCTCTTC 1 cut(s) 1437
LmnI GCTCC 1 cut(s) 298
Lsp1109I GCAGC 6 cut(s) 304, 733, 1189, 1270, 1292, 2021
LweI GCATC 3 cut(s) 721, 751, 2030
MaeI CTAG 4 cut(s) 321, 609, 765, 2015
MaeII ACGT 3 cut(s) 119, 1098, 2568
MaeIII GTNAC 7 cut(s) 907, 960, 1516, 1534, 1630, 1684, 2210
MbiI CCGCTC 1 cut(s) 183
MboII GAAGA 9 cut(s) 150, 446, 740, 1016, 1245, 1424, 1910, 2248, 2448
MfeI CAATTG 2 cut(s) 1512, 2175
MflI RGATCY 5 cut(s) 438, 605, 840, 2135, 2377
MhlI GDGCHC 1 cut(s) 1848
MlyI GAGTC 2 cut(s) 130, 207
MroXI GAANNNNTTC 1 cut(s) 1237
MslI CAYNNNNRTG 2 cut(s) 784, 2064
MspA1I CMGCKG 3 cut(s) 505, 1000, 1283
MspCI CTTAAG 1 cut(s) 1393
MspI CCGG 1 cut(s) 725
MspR9I CCNGG 2 cut(s) 1868, 2416
MunI CAATTG 2 cut(s) 1512, 2175
MvaI CCWGG 2 cut(s) 1868, 2416
MvnI CGCG 2 cut(s) 655, 2447
MwoI GCNNNNNNNGC 5 cut(s) 833, 1164, 2006, 2114, 2420
NcoI CCATGG 1 cut(s) 2595
NlaIII CATG 8 cut(s) 648, 664, 990, 1167, 1732, 2445, 2479, 2599
NlaIV GGNNCC 6 cut(s) 565, 674, 1273, 1350, 2379, 2592
NmuCI GTSAC 4 cut(s) 907, 960, 1534, 1684
NspI RCATGY 1 cut(s) 990
NspV TTCGAA 1 cut(s) 1435
PciSI GCTCTTC 1 cut(s) 1437
PdmI GAANNNNTTC 1 cut(s) 1237
PfeI GAWTC 6 cut(s) 1143, 1233, 2156, 2165, 2315, 2539
PkrI GCNGC 6 cut(s) 319, 748, 1179, 1282, 1285, 2011
PleI GAGTC 2 cut(s) 130, 206
PpsI GAGTC 2 cut(s) 130, 206
PshBI ATTAAT 2 cut(s) 702, 2406
PsiI TTATAA 2 cut(s) 1481, 2400
Psp1406I AACGTT 1 cut(s) 2568
Psp6I CCWGG 2 cut(s) 1866, 2414
PspGI CCWGG 2 cut(s) 1866, 2414
PspN4I GGNNCC 6 cut(s) 565, 674, 1273, 1350, 2379, 2592
PspPI GGNCC 5 cut(s) 383, 672, 914, 1077, 1900
PsuI RGATCY 5 cut(s) 438, 605, 840, 2135, 2377
PvuII CAGCTG 2 cut(s) 1000, 1283
RsaI GTAC 6 cut(s) 267, 427, 620, 1744, 2027, 2185
RsaNI GTAC 6 cut(s) 266, 426, 619, 1743, 2026, 2184
RseI CAYNNNNRTG 2 cut(s) 784, 2064
Rsr2I CGGWCCG 1 cut(s) 1077
RsrII CGGWCCG 1 cut(s) 1077
SapI GCTCTTC 1 cut(s) 1437
SatI GCNGC 6 cut(s) 318, 747, 1178, 1281, 1284, 2010
Sau96I GGNCC 5 cut(s) 383, 672, 914, 1077, 1900
ScaI AGTACT 1 cut(s) 2027
SchI GAGTC 2 cut(s) 130, 207
ScrFI CCNGG 2 cut(s) 1868, 2416
SduI GDGCHC 1 cut(s) 1848
SfaNI GCATC 3 cut(s) 721, 751, 2030
SfcI CTRYAG 1 cut(s) 2248
SfuI TTCGAA 1 cut(s) 1435
SinI GGWCC 3 cut(s) 383, 672, 1077
SmiI ATTTAAAT 1 cut(s) 784
SmiMI CAYNNNNRTG 2 cut(s) 784, 2064
SmlI CTYRAG 4 cut(s) 66, 1393, 1797, 2366
SmoI CTYRAG 4 cut(s) 66, 1393, 1797, 2366
SsiI CCGC 8 cut(s) 99, 108, 183, 503, 653, 1398, 1424, 2588
SspI AATATT 2 cut(s) 308, 815
SspMI CTAG 4 cut(s) 321, 609, 765, 2015
StyD4I CCNGG 2 cut(s) 1866, 2414
StyI CCWWGG 4 cut(s) 1472, 1610, 2143, 2595
SwaI ATTTAAAT 1 cut(s) 784
TaiI ACGT 3 cut(s) 122, 1101, 2571
TaqI TCGA 7 cut(s) 458, 1435, 1987, 2091, 2168, 2224, 2542
TaqII GACCGA 1 cut(s) 1372
TatI WGTACW 1 cut(s) 2025
TfiI GAWTC 6 cut(s) 1143, 1233, 2156, 2165, 2315, 2539
TscAI CASTG 6 cut(s) 36, 559, 691, 780, 1320, 2298
TseFI GTSAC 4 cut(s) 907, 960, 1534, 1684
TseI GCWGC 6 cut(s) 317, 746, 1177, 1280, 1283, 2009
Tsp45I GTSAC 4 cut(s) 907, 960, 1534, 1684
TspGWI ACGGA 1 cut(s) 283
TspRI CASTG 6 cut(s) 36, 559, 691, 780, 1320, 2298
Vha464I CTTAAG 1 cut(s) 1393
VneI GTGCAC 1 cut(s) 1844
VpaK11BI GGWCC 3 cut(s) 383, 672, 1077
VspI ATTAAT 2 cut(s) 702, 2406
XagI CCTNNNNNAGG 1 cut(s) 2390
XapI RAATTY 8 cut(s) 221, 388, 790, 872, 898, 1499, 1855, 2098
XceI RCATGY 1 cut(s) 990
XmiI GTMKAC 3 cut(s) 1053, 1597, 2247
XmnI GAANNNNTTC 1 cut(s) 1237
XspI CTAG 4 cut(s) 321, 609, 765, 2015
ZraI GACGTC 1 cut(s) 120
ZrmI AGTACT 1 cut(s) 2027
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.