Prupe.3G055100_v2.0.a1

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000083
Physical Location & Seq
Forward (+)
3882493 .. 3887484
4992 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G055100.1

Sequence Viewer

Length: 2565 bp
ATGTGGCGGACATTGAAGCATTTCCTCCTCTTTGCAGTACTGCAGTTTGGTGGTTTTGCTCTCAATCTTATGCTCCTTGTTCATGCCCAGGATCAATCAGGCTTCATTAGCATCGATTGCGGCTTAGCAACAAATTCTAGCTATACTGAAAAGAAAACAGGCATTAACTATATTTCAGATGAAGGCTTCATAGAAACCAATGAGAGCACTCGGAACTGCTACAAAATAAACGTTACAAGGGGTACCAGATATTTGATCCGAGCAAGTTTCTTATATGGGAATTATGACGACCAGTATAGACTGCCAGAATTCCAACTGCATCTTGGGCCTAATTTGTGGGATTCAGTGAAGTTGGAGAATGCGTCCACCGTCGCAAACAAAGAGCTCATACATGTCCCTCTGCTAAACTATATACATGTTTGTTTGGTGGACACAAACAAGGGGGTTCCATTTATATCAGCAATAGAGCTAAGGACTTTGCCTAATAACACTTATGTAGCAGAGGCATGGTCCTTGGCACTTGATTCGCGGTATGACACGGGTCAAATAGCAAATTCAAAGCAATTGTATAGGTATCCAGACGATATATATGATCGCTTCTGGTATGGTAATGACCGCGATGAGTGGACACAATTAAACACCTCGTCTTCAATTGACACTAACAATACTTACCAACCATCATCTGTCGTGATGACTACTGCTGCCACACCAAAAAATGTAGATGATTCCTTAAATATTTTCTGGCTGCCTTCTGATAACAGTGGAAAATATTATATTTACATGCACTTTGCAGAAGTTGAAAAGCTCCAAGGCAACGAGTCTAGACAGCTTGACATTACTACGAACGGAGAGCCCTATTTTGGGCCATTTGCTCCTGATTACTTGTCTGTAAGTACGATTTTTAGCCTGTCAGATTGGAGCGGAGGACAATATATTACTCTTTCAATCTCTAAGACTGGGAACTCTACCCTCCCACCGATCCTCAATGCTTTCGAGACCTATATGGTCAAAGACTTCTCAGAACTAGAAACAAACCAACAAGATGTGAATGCAATCACAAACATCAAGTCAGCACATAACATCAAAAGGAATTGGCAAGGAGATCCCTGCAGCCCTCAAGTTTACTCATGGGAAGGCCTAAATTGTACTTATTATGAAAATGGCCAGCAGCCAAGAATAACATCCTTGGATTTATCGAACAATAAATTAAAGGGATCAATTCCAGAATTTCTGTCTCACCTGCCAAAGTTAACCATCTTAAAGTTGGACAAAAACAAGCTCACAGGTTCTGTTCCGAAAGGACTCATTCAAAGAAGGAAGGATGGGTTTCTATCATTCAGTTTCTGCGAAAATCCAAATCAATCCGAACAAGTCCCTTGCGAACTAAAGAAGAAACACCGTACCAATATTCACCTAGCGGTGTATATCCTTGGATTCTTCATTCTCTTATCAACAATATTAGCTGTTTTATGGGTGGTCTTTAAAAGGAAAAGACAACATGAGATAAAGAAGAATTTCTACAAAAATGAATTTTTGGAGTCACAAGGTCAACGGTTTACATACTCAGAGATTGTGAAGATTACCAATAATTTTGCATCAATAATCGGAAGAGGCGGTTTTGGAAAAGTATACCTTGGTGCTCTGAAAAATGAGACTCAAGTTGCCGTGAAGTTACTCGGTTCATCAAGGCAAGGCTCAAATGAATTTCGAAATGAGGTTATACTTTTAATGAGTGCTCATCATAGAAACTTGGTTTCTCTCATTGGTTACTGCGATGAAGGTGACACAATGGCCCTTGTTTATGACTACGTAGCCAATGGAAACTTGGAACAACATATTTCATCTGATGTAGGTAAAAACGTTTTGACTTGGAAAGAGAGGCTTCAAATTGCAGTAGATGCCGCACGAGCTCATGGCAGAAATATTTTTGCAGGACTGGAATATTTACACAATGGTTGCAAGCCACCTATTGTGCATAGAGATCTAAAGACATCCAATATCTTATTGAATGAAAAGTTGCAAGCTAAGATAGCTGACTTTGGTCTTTCTAAAGGTCTTGCAACTGAAAGTGCCACTCATGTATCAACCGCGGCCAAAGGAACATTTGGATACCTGGATCCTGAATATTGCAGTACTGGACAACTTAACAAAAAGAGTGACATATACAGCTTTGGGATTGTGTTGCTAGAGCTCATAACAGGTAGAGCAGCAATAATAAGAGATTTGGAACAATTACCTATTCACATATGTCAATGGGTGAGGCCTAAATTTGAGAAGATCGAAATCGAAATTGAAAGCATTGTGGATTCAAGAATACAAGGAACCTTCCTCAAATCTTCTGCTAAAAAATCCATAGAAATTGCCATGGCTTGTGTGTCTTCAACATCAATCCAAAGGCCCGATATAACTGTTGTGTTTAATGATTTGAAAGAGTGTTTGGAAATTGAGATGCCTTCTGAAATAACAAATGTTACAGAAGCTTATGAGAGCGATGAGAGTGATGATACAATCAGTTCAAGCGGCTCAATTATAAAGACCTCCCACATCAGTTCTGAAGCTGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

855

Amino Acids

96.32

Weight (kDa)

6.04

Isoelectric Point (pI)

38.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2531
AarI CACCTGC 1 cut(s) 1248
Acc36I ACCTGC 1 cut(s) 1248
Acc65I GGTACC 1 cut(s) 242
AccB1I GGYRCC 1 cut(s) 242
AccBSI CCGCTC 1 cut(s) 921
AccI GTMKAC 1 cut(s) 1629
AccII CGCG 3 cut(s) 529, 618, 2090
AclI AACGTT 2 cut(s) 231, 1860
AclWI GGATC 7 cut(s) 99, 250, 973, 1097, 1222, 2111, 2124
AcoI YGGCCR 2 cut(s) 1162, 2091
AcsI RAATTY 8 cut(s) 133, 308, 553, 1226, 1513, 1529, 1703, 2267
AfaI GTAC 6 cut(s) 39, 244, 895, 1147, 1402, 2134
AfiI CCNNNNNNNGG 2 cut(s) 860, 861
AflIII ACRYGT 2 cut(s) 391, 415
AjnI CCWGG 2 cut(s) 87, 2112
AjuI GAANNNNNNNTTGG 2 cut(s) 2420, 2452
Alw21I GWGCWC 6 cut(s) 209, 387, 1642, 1738, 1912, 2193
Alw26I GTCTC 3 cut(s) 989, 1239, 1646
AlwI GGATC 7 cut(s) 99, 250, 973, 1097, 1222, 2111, 2124
AlwNI CAGNNNCTG 2 cut(s) 1289, 1344
AoxI GGCC 8 cut(s) 326, 863, 1135, 1162, 1791, 2091, 2261, 2396
ApeKI GCWGC 5 cut(s) 701, 745, 1110, 1168, 2207
ApoI RAATTY 8 cut(s) 133, 308, 553, 1226, 1513, 1529, 1703, 2267
ArsI GACNNNNNNTTYG 2 cut(s) 1052, 1084
Asp700I GAANNNNTTC 2 cut(s) 20, 1514
Asp718I GGTACC 1 cut(s) 242
AspS9I GGNCC 5 cut(s) 326, 510, 863, 1792, 2397
AsuHPI GGTGA 4 cut(s) 1229, 1403, 1793, 2269
AsuII TTCGAA 1 cut(s) 1708
AvaII GGWCC 1 cut(s) 510
BaeI ACNNNNGTAYC 2 cut(s) 2064, 2097
BalI TGGCCA 1 cut(s) 1164
BamHI GGATCC 1 cut(s) 2116
BanI GGYRCC 1 cut(s) 242
BanII GRGCYC 4 cut(s) 387, 855, 1912, 2193
BarI GAAGNNNNNNTAC 2 cut(s) 1502, 1534
BauI CACGAG 1 cut(s) 1905
BbsI GAAGAC 2 cut(s) 639, 2370
Bbv12I GWGCWC 6 cut(s) 209, 387, 1642, 1738, 1912, 2193
BbvI GCAGC 5 cut(s) 688, 732, 1122, 1180, 2219
BccI CCATC 3 cut(s) 685, 1262, 1316
BceAI ACGGC 1 cut(s) 1649
BcgI CGANNNNNNTGC 2 cut(s) 507, 541
BciT130I CCWGG 2 cut(s) 89, 2114
BciVI GTATCC 2 cut(s) 585, 2102
BcoDI GTCTC 3 cut(s) 989, 1239, 1646
BfaI CTAG 5 cut(s) 138, 822, 1025, 1415, 2186
BfmI CTRYAG 2 cut(s) 41, 1108
BfuAI ACCTGC 1 cut(s) 1248
BfuI GTATCC 2 cut(s) 585, 2102
BglII AGATCT 1 cut(s) 1981
BisI GCNGC 9 cut(s) 121, 702, 746, 1111, 1169, 1902, 2091, 2208, 2521
BlpI GCTNAGC 1 cut(s) 124
BlsI GCNGC 9 cut(s) 122, 703, 747, 1112, 1170, 1903, 2092, 2209, 2522
BmcAI AGTACT 2 cut(s) 39, 2134
Bme1390I CCNGG 2 cut(s) 89, 2114
Bme18I GGWCC 1 cut(s) 510
BmgT120I GGNCC 5 cut(s) 326, 510, 863, 1792, 2397
BmiI GGNNCC 4 cut(s) 244, 447, 2118, 2323
BmrFI CCNGG 2 cut(s) 89, 2114
BmrI ACTGGG 1 cut(s) 966
BmsI GCATC 5 cut(s) 120, 328, 1604, 1888, 2439
BmuI ACTGGG 1 cut(s) 966
BoxI GACNNNNGTC 2 cut(s) 540, 2040
BpiI GAAGAC 2 cut(s) 639, 2370
Bpu10I CCTNAGC 1 cut(s) 470
Bpu1102I GCTNAGC 1 cut(s) 124
Bpu14I TTCGAA 1 cut(s) 1708
BpuEI CTTGAG 2 cut(s) 1101, 1641
Bsa29I ATCGAT 1 cut(s) 114
BsaAI YACGTR 1 cut(s) 1810
BsaBI GATNNNNATC 1 cut(s) 2282
BsaI GGTCTC 1 cut(s) 989
BsaJI CCNNGG 8 cut(s) 87, 513, 808, 1185, 1429, 1633, 2088, 2364
BsaXI ACNNNNNCTCC 2 cut(s) 347, 377
Bsc4I CCNNNNNNNGG 2 cut(s) 860, 861
Bse1I ACTGG 4 cut(s) 292, 961, 1941, 2140
Bse8I GATNNNNATC 1 cut(s) 2282
BseBI CCWGG 2 cut(s) 89, 2114
BseCI ATCGAT 1 cut(s) 114
BseDI CCNNGG 8 cut(s) 87, 513, 808, 1185, 1429, 1633, 2088, 2364
BseGI GGATG 3 cut(s) 1181, 1327, 1991
BseJI GATNNNNATC 1 cut(s) 2282
BseLI CCNNNNNNNGG 2 cut(s) 860, 861
BseMII CTCAG 3 cut(s) 1032, 1578, 2550
BseNI ACTGG 4 cut(s) 292, 961, 1941, 2140
BseRI GAGGAG 1 cut(s) 17
BseXI GCAGC 5 cut(s) 688, 732, 1122, 1180, 2219
Bsh1236I CGCG 3 cut(s) 529, 618, 2090
BshFI GGCC 8 cut(s) 328, 865, 1137, 1164, 1793, 2093, 2263, 2398
BshNI GGYRCC 1 cut(s) 242
BshVI ATCGAT 1 cut(s) 114
BsiHKAI GWGCWC 6 cut(s) 209, 387, 1642, 1738, 1912, 2193
BslFI GGGAC 2 cut(s) 380, 1358
BslI CCNNNNNNNGG 2 cut(s) 860, 861
BsmAI GTCTC 3 cut(s) 989, 1239, 1646
BsmFI GGGAC 2 cut(s) 380, 1358
BsmI GAATGC 2 cut(s) 364, 1054
BsnI GGCC 8 cut(s) 328, 865, 1137, 1164, 1793, 2093, 2263, 2398
Bso31I GGTCTC 1 cut(s) 989
Bsp119I TTCGAA 1 cut(s) 1708
Bsp1286I GDGCHC 7 cut(s) 209, 387, 855, 1642, 1738, 1912, 2193
Bsp143I GATC 9 cut(s) 91, 255, 592, 978, 1102, 1214, 1981, 2116, 2277
Bsp1720I GCTNAGC 1 cut(s) 124
Bsp19I CCATGG 1 cut(s) 2364
BspANI GGCC 8 cut(s) 328, 865, 1137, 1164, 1793, 2093, 2263, 2398
BspCNI CTCAG 3 cut(s) 1031, 1577, 2551
BspDI ATCGAT 1 cut(s) 114
BspFNI CGCG 3 cut(s) 529, 618, 2090
BspLI GGNNCC 4 cut(s) 244, 447, 2118, 2323
BspMAI CTGCAG 2 cut(s) 45, 1112
BspMI ACCTGC 1 cut(s) 1248
BspPI GGATC 7 cut(s) 99, 250, 973, 1097, 1222, 2111, 2124
BspT104I TTCGAA 1 cut(s) 1708
BspT107I GGYRCC 1 cut(s) 242
BspTNI GGTCTC 1 cut(s) 989
BsrBI CCGCTC 1 cut(s) 921
BsrI ACTGG 4 cut(s) 292, 961, 1941, 2140
BssECI CCNNGG 8 cut(s) 87, 513, 808, 1185, 1429, 1633, 2088, 2364
BssMI GATC 9 cut(s) 91, 255, 592, 978, 1102, 1214, 1981, 2116, 2277
BssNAI GTATAC 1 cut(s) 1630
BssSI CACGAG 1 cut(s) 1905
BssT1I CCWWGG 6 cut(s) 513, 808, 1185, 1429, 1633, 2364
Bst1107I GTATAC 1 cut(s) 1630
Bst2BI CACGAG 1 cut(s) 1905
Bst2UI CCWGG 2 cut(s) 89, 2114
Bst4CI ACNGT 5 cut(s) 370, 761, 1400, 1554, 2410
Bst6I CTCTTC 1 cut(s) 1603
BstAPI GCANNNNNTGC 2 cut(s) 117, 1898
BstBAI YACGTR 1 cut(s) 1810
BstBI TTCGAA 1 cut(s) 1708
BstC8I GCNNGC 3 cut(s) 1166, 1961, 2022
BstDEI CTNAG 7 cut(s) 124, 470, 951, 1018, 1564, 2025, 2559
BstDSI CCRYGG 2 cut(s) 2088, 2364
BstF5I GGATG 3 cut(s) 1181, 1327, 1991
BstFNI CGCG 3 cut(s) 529, 618, 2090
BstKTI GATC 9 cut(s) 94, 258, 595, 981, 1105, 1217, 1984, 2119, 2280
BstMAI GTCTC 3 cut(s) 989, 1239, 1646
BstMBI GATC 9 cut(s) 91, 255, 592, 978, 1102, 1214, 1981, 2116, 2277
BstMWI GCNNNNNNNGC 6 cut(s) 108, 117, 325, 1898, 1907, 2030
BstNI CCWGG 2 cut(s) 89, 2114
BstNSI RCATGY 3 cut(s) 395, 419, 784
BstPAI GACNNNNGTC 2 cut(s) 540, 2040
BstSCI CCNGG 2 cut(s) 87, 2112
BstSFI CTRYAG 2 cut(s) 41, 1108
BstSNI TACGTA 1 cut(s) 1810
BstUI CGCG 3 cut(s) 529, 618, 2090
BstV1I GCAGC 5 cut(s) 688, 732, 1122, 1180, 2219
BstV2I GAAGAC 2 cut(s) 639, 2370
BstX2I RGATCY 3 cut(s) 1102, 1981, 2116
BstYI RGATCY 3 cut(s) 1102, 1981, 2116
BstZ17I GTATAC 1 cut(s) 1630
Bsu15I ATCGAT 1 cut(s) 114
BsuI GTATCC 2 cut(s) 585, 2102
BsuRI GGCC 8 cut(s) 328, 865, 1137, 1164, 1793, 2093, 2263, 2398
BsuTUI ATCGAT 1 cut(s) 114
BtgI CCRYGG 2 cut(s) 2088, 2364
BtgZI GCGATG 3 cut(s) 633, 1788, 2505
BtsCI GGATG 3 cut(s) 1181, 1327, 1991
BtsIMutI CAGTG 2 cut(s) 351, 766
BveI ACCTGC 1 cut(s) 1248
Cac8I GCNNGC 3 cut(s) 1166, 1961, 2022
CaiI CAGNNNCTG 2 cut(s) 1289, 1344
Cfr13I GGNCC 5 cut(s) 326, 510, 863, 1792, 2397
Cfr42I CCGCGG 1 cut(s) 2091
ClaI ATCGAT 1 cut(s) 114
CseI GACGC 1 cut(s) 351
Csp6I GTAC 6 cut(s) 38, 243, 894, 1146, 1401, 2133
CviQI GTAC 6 cut(s) 38, 243, 894, 1146, 1401, 2133
DdeI CTNAG 7 cut(s) 124, 470, 951, 1018, 1564, 2025, 2559
DpnI GATC 9 cut(s) 93, 257, 594, 980, 1104, 1216, 1983, 2118, 2279
DpnII GATC 9 cut(s) 91, 255, 592, 978, 1102, 1214, 1981, 2116, 2277
DraI TTTAAA 1 cut(s) 1483
EaeI YGGCCR 2 cut(s) 1162, 2091
Eam1104I CTCTTC 1 cut(s) 1603
EarI CTCTTC 1 cut(s) 1603
EciI GGCGGA 1 cut(s) 22
Ecl136II GAGCTC 3 cut(s) 385, 1910, 2191
Eco105I TACGTA 1 cut(s) 1810
Eco130I CCWWGG 6 cut(s) 513, 808, 1185, 1429, 1633, 2364
Eco147I AGGCCT 2 cut(s) 1137, 2263
Eco24I GRGCYC 4 cut(s) 387, 855, 1912, 2193
Eco31I GGTCTC 1 cut(s) 989
Eco47I GGWCC 1 cut(s) 510
Eco53kI GAGCTC 3 cut(s) 385, 1910, 2191
EcoICRI GAGCTC 3 cut(s) 385, 1910, 2191
EcoRI GAATTC 1 cut(s) 308
EcoRII CCWGG 2 cut(s) 87, 2112
EcoT14I CCWWGG 6 cut(s) 513, 808, 1185, 1429, 1633, 2364
EcoT38I GRGCYC 4 cut(s) 387, 855, 1912, 2193
ErhI CCWWGG 6 cut(s) 513, 808, 1185, 1429, 1633, 2364
FalI AAGNNNNNCTT 4 cut(s) 1617, 1649, 1866, 1898
FaqI GGGAC 2 cut(s) 380, 1358
FauNDI CATATG 1 cut(s) 2246
FblI GTMKAC 1 cut(s) 1629
Fnu4HI GCNGC 9 cut(s) 121, 702, 746, 1111, 1169, 1902, 2091, 2208, 2521
FokI GGATG 3 cut(s) 1168, 1334, 1978
FriOI GRGCYC 4 cut(s) 387, 855, 1912, 2193
Fsp4HI GCNGC 9 cut(s) 121, 702, 746, 1111, 1169, 1902, 2091, 2208, 2521
FspBI CTAG 5 cut(s) 138, 822, 1025, 1415, 2186
GluI GCNGC 9 cut(s) 121, 702, 746, 1111, 1169, 1902, 2091, 2208, 2521
HaeIII GGCC 8 cut(s) 328, 865, 1137, 1164, 1793, 2093, 2263, 2398
HgaI GACGC 1 cut(s) 351
HincII GTYRAC 2 cut(s) 1251, 1550
HindII GTYRAC 2 cut(s) 1251, 1550
HindIII AAGCTT 1 cut(s) 2478
HinfI GANTC 9 cut(s) 341, 524, 725, 818, 1302, 1434, 1538, 1654, 2306
HpaI GTTAAC 1 cut(s) 1251
HphI GGTGA 4 cut(s) 1229, 1403, 1793, 2269
Hpy166II GTNNAC 8 cut(s) 366, 430, 627, 1123, 1251, 1550, 1557, 1630
Hpy188III TCNNGA 8 cut(s) 578, 688, 822, 875, 994, 1223, 2120, 2310
Hpy8I GTNNAC 8 cut(s) 366, 430, 627, 1123, 1251, 1550, 1557, 1630
Hpy99I CGWCG 1 cut(s) 374
HpyAV CCTTC 8 cut(s) 176, 759, 1127, 1308, 1312, 1772, 2335, 2463
HpyCH4III ACNGT 5 cut(s) 370, 761, 1400, 1554, 2410
HpyCH4IV ACGT 3 cut(s) 231, 1809, 1860
HpyF10VI GCNNNNNNNGC 6 cut(s) 108, 117, 325, 1898, 1907, 2030
HpyF3I CTNAG 7 cut(s) 124, 470, 951, 1018, 1564, 2025, 2559
HpySE526I ACGT 3 cut(s) 231, 1809, 1860
KpnI GGTACC 1 cut(s) 246
KspAI GTTAAC 1 cut(s) 1251
KspI CCGCGG 1 cut(s) 2091
Kzo9I GATC 9 cut(s) 91, 255, 592, 978, 1102, 1214, 1981, 2116, 2277
LmnI GCTCC 4 cut(s) 78, 810, 877, 918
Lsp1109I GCAGC 5 cut(s) 688, 732, 1122, 1180, 2219
LweI GCATC 5 cut(s) 120, 328, 1604, 1888, 2439
MaeI CTAG 5 cut(s) 138, 822, 1025, 1415, 2186
MaeII ACGT 3 cut(s) 231, 1809, 1860
MaeIII GTNAC 7 cut(s) 232, 1539, 1671, 1766, 1781, 2156, 2470
MalI GATC 9 cut(s) 93, 257, 594, 980, 1104, 1216, 1983, 2118, 2279
MbiI CCGCTC 1 cut(s) 921
MboI GATC 9 cut(s) 91, 255, 592, 978, 1102, 1214, 1981, 2116, 2277
MboII GAAGA 9 cut(s) 639, 1402, 1429, 1522, 1588, 1620, 2287, 2328, 2370
MfeI CAATTG 2 cut(s) 563, 651
MflI RGATCY 3 cut(s) 1102, 1981, 2116
MhlI GDGCHC 7 cut(s) 209, 387, 855, 1642, 1738, 1912, 2193
MlsI TGGCCA 1 cut(s) 1164
MluNI TGGCCA 1 cut(s) 1164
MlyI GAGTC 4 cut(s) 827, 1296, 1547, 1648
MmeI TCCRAC 3 cut(s) 333, 337, 1245
Mox20I TGGCCA 1 cut(s) 1164
MroXI GAANNNNTTC 2 cut(s) 20, 1514
MscI TGGCCA 1 cut(s) 1164
Msp20I TGGCCA 1 cut(s) 1164
MspA1I CMGCKG 1 cut(s) 2090
MspR9I CCNGG 2 cut(s) 89, 2114
MunI CAATTG 2 cut(s) 563, 651
Mva1269I GAATGC 2 cut(s) 364, 1054
MvaI CCWGG 2 cut(s) 89, 2114
MvnI CGCG 3 cut(s) 529, 618, 2090
MwoI GCNNNNNNNGC 6 cut(s) 108, 117, 325, 1898, 1907, 2030
NcoI CCATGG 1 cut(s) 2364
NdeI CATATG 1 cut(s) 2246
NdeII GATC 9 cut(s) 91, 255, 592, 978, 1102, 1214, 1981, 2116, 2277
NlaIV GGNNCC 4 cut(s) 244, 447, 2118, 2323
NmuCI GTSAC 3 cut(s) 1539, 1781, 2156
NspI RCATGY 3 cut(s) 395, 419, 784
NspV TTCGAA 1 cut(s) 1708
PaqCI CACCTGC 1 cut(s) 1248
PceI AGGCCT 2 cut(s) 1137, 2263
PciI ACATGT 2 cut(s) 391, 415
PctI GAATGC 2 cut(s) 364, 1054
PdmI GAANNNNTTC 2 cut(s) 20, 1514
PfeI GAWTC 5 cut(s) 341, 524, 725, 1434, 2306
PkrI GCNGC 9 cut(s) 122, 703, 747, 1112, 1170, 1903, 2092, 2209, 2522
PleI GAGTC 4 cut(s) 826, 1296, 1546, 1648
PpsI GAGTC 4 cut(s) 826, 1296, 1546, 1648
Ppu21I YACGTR 1 cut(s) 1810
PscI ACATGT 2 cut(s) 391, 415
PshAI GACNNNNGTC 2 cut(s) 540, 2040
PsiI TTATAA 1 cut(s) 2531
Psp124BI GAGCTC 3 cut(s) 387, 1912, 2193
Psp1406I AACGTT 2 cut(s) 231, 1860
Psp6I CCWGG 2 cut(s) 87, 2112
PspGI CCWGG 2 cut(s) 87, 2112
PspN4I GGNNCC 4 cut(s) 244, 447, 2118, 2323
PspPI GGNCC 5 cut(s) 326, 510, 863, 1792, 2397
PstI CTGCAG 2 cut(s) 45, 1112
PstNI CAGNNNCTG 2 cut(s) 1289, 1344
PsuI RGATCY 3 cut(s) 1102, 1981, 2116
RsaI GTAC 6 cut(s) 39, 244, 895, 1147, 1402, 2134
RsaNI GTAC 6 cut(s) 38, 243, 894, 1146, 1401, 2133
SacI GAGCTC 3 cut(s) 387, 1912, 2193
SacII CCGCGG 1 cut(s) 2091
SatI GCNGC 9 cut(s) 121, 702, 746, 1111, 1169, 1902, 2091, 2208, 2521
Sau3AI GATC 9 cut(s) 91, 255, 592, 978, 1102, 1214, 1981, 2116, 2277
Sau96I GGNCC 5 cut(s) 326, 510, 863, 1792, 2397
ScaI AGTACT 2 cut(s) 39, 2134
SchI GAGTC 4 cut(s) 827, 1296, 1547, 1648
ScrFI CCNGG 2 cut(s) 89, 2114
SduI GDGCHC 7 cut(s) 209, 387, 855, 1642, 1738, 1912, 2193
SfaNI GCATC 5 cut(s) 120, 328, 1604, 1888, 2439
SfcI CTRYAG 2 cut(s) 41, 1108
Sfr303I CCGCGG 1 cut(s) 2091
SfuI TTCGAA 1 cut(s) 1708
SgrBI CCGCGG 1 cut(s) 2091
SinI GGWCC 1 cut(s) 510
SmlI CTYRAG 2 cut(s) 1116, 1656
SmoI CTYRAG 2 cut(s) 1116, 1656
SnaBI TACGTA 1 cut(s) 1810
SseBI AGGCCT 2 cut(s) 1137, 2263
SspI AATATT 7 cut(s) 736, 770, 1408, 1458, 1924, 1943, 2126
SspMI CTAG 5 cut(s) 138, 822, 1025, 1415, 2186
SstI GAGCTC 3 cut(s) 387, 1912, 2193
StuI AGGCCT 2 cut(s) 1137, 2263
StyD4I CCNGG 2 cut(s) 87, 2112
StyI CCWWGG 6 cut(s) 513, 808, 1185, 1429, 1633, 2364
TaaI ACNGT 5 cut(s) 370, 761, 1400, 1554, 2410
TaiI ACGT 3 cut(s) 234, 1812, 1863
TaqI TCGA 6 cut(s) 114, 993, 1196, 1708, 2280, 2286
TatI WGTACW 3 cut(s) 37, 1145, 2132
TauI GCSGC 4 cut(s) 123, 1904, 2093, 2523
TfiI GAWTC 5 cut(s) 341, 524, 725, 1434, 2306
TscAI CASTG 2 cut(s) 351, 766
TseFI GTSAC 3 cut(s) 1539, 1781, 2156
TseI GCWGC 5 cut(s) 701, 745, 1110, 1168, 2207
Tsp45I GTSAC 3 cut(s) 1539, 1781, 2156
TspGWI ACGGA 1 cut(s) 861
TspRI CASTG 2 cut(s) 351, 766
VpaK11BI GGWCC 1 cut(s) 510
XapI RAATTY 8 cut(s) 133, 308, 553, 1226, 1513, 1529, 1703, 2267
XbaI TCTAGA 1 cut(s) 821
XceI RCATGY 3 cut(s) 395, 419, 784
XcmI CCANNNNNNNNNTGG 3 cut(s) 320, 1261, 1822
XmiI GTMKAC 1 cut(s) 1629
XmnI GAANNNNTTC 2 cut(s) 20, 1514
XspI CTAG 5 cut(s) 138, 822, 1025, 1415, 2186
ZrmI AGTACT 2 cut(s) 39, 2134
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.