AT5G59616

leucine-rich repeat protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
24017511 .. 24018077
567 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G59616.1

Sequence Viewer

Length: 462 bp
ATGGAATGGAGTTCGAGTAATGTCAATAACCAATATTACTTGTATGGACATTTTGCTGAGATCCAAGAGTTGCAGACCAACGATACAAGGGAATTTAACATGTTTTGGAATAGACAAGTCATCGCCGACCCTTTAATACCTCCAAAATTCACTATTTATACTATCTTTAGCCAGTCACCAAGTACTTGTGAAGGAGGAAAATGCAGTTTTCAGCTGAGAAGAACCAACAGATCAACTCTTCCACCTTTGCTTAACGCTTTTGAGGTCTACACAGTTATCCAGTTTCCGCAGATCGAAACAAATGAAAACGACGTGGTTGCTGTCCAAAACATCAAAACCACCTATGAAATTAGTAGAAATAGCTGGCAAGGAGATCCATGTGTCCCTCGGCAGTTTATGTGGGAGGGATTAAACTGCAGTGACACTGATATGTCTACACGACCAAGAATCACTTCTTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

153

Amino Acids

17.84

Weight (kDa)

4.95

Isoelectric Point (pI)

43.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 1 - 92 2e-26 Malectin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 267, 434
AciI CCGC 1 cut(s) 287
AclWI GGATC 2 cut(s) 55, 368
AcsI RAATTY 2 cut(s) 92, 146
AfaI GTAC 1 cut(s) 184
AflIII ACRYGT 1 cut(s) 99
AjiI CACGTC 1 cut(s) 313
AjuI GAANNNNNNNTTGG 1 cut(s) 436
AluBI AGCT 2 cut(s) 214, 363
AluI AGCT 2 cut(s) 214, 363
AlwI GGATC 2 cut(s) 55, 368
ApoI RAATTY 2 cut(s) 92, 146
Asp700I GAANNNNTTC 1 cut(s) 451
AsuHPI GGTGA 1 cut(s) 168
BcgI CGANNNNNNTGC 2 cut(s) 299, 333
BfmI CTRYAG 1 cut(s) 415
BmcAI AGTACT 1 cut(s) 184
BmgBI CACGTC 1 cut(s) 313
BsaJI CCNNGG 1 cut(s) 386
BsaXI ACNNNNNCTCC 1 cut(s) 31
Bse1I ACTGG 2 cut(s) 172, 280
BseDI CCNNGG 1 cut(s) 386
BseMII CTCAG 2 cut(s) 48, 206
BseNI ACTGG 2 cut(s) 172, 280
BslFI GGGAC 1 cut(s) 368
BsmFI GGGAC 1 cut(s) 368
Bsp143I GATC 4 cut(s) 60, 230, 291, 373
BspACI CCGC 1 cut(s) 287
BspCNI CTCAG 2 cut(s) 49, 207
BspMAI CTGCAG 1 cut(s) 419
BspPI GGATC 2 cut(s) 55, 368
BsrI ACTGG 2 cut(s) 172, 280
BssECI CCNNGG 1 cut(s) 386
BssMI GATC 4 cut(s) 60, 230, 291, 373
Bst4CI ACNGT 1 cut(s) 274
Bst6I CTCTTC 1 cut(s) 243
BstC8I GCNNGC 1 cut(s) 365
BstDEI CTNAG 2 cut(s) 57, 215
BstKTI GATC 4 cut(s) 63, 233, 294, 376
BstMBI GATC 4 cut(s) 60, 230, 291, 373
BstNSI RCATGY 1 cut(s) 103
BstSFI CTRYAG 1 cut(s) 415
BstX2I RGATCY 2 cut(s) 60, 373
BstYI RGATCY 2 cut(s) 60, 373
BtgZI GCGATG 1 cut(s) 106
BtrI CACGTC 1 cut(s) 313
BtsI GCAGTG 1 cut(s) 424
BtsIMutI CAGTG 2 cut(s) 423, 424
Cac8I GCNNGC 1 cut(s) 365
Csp6I GTAC 1 cut(s) 183
CviAII CATG 2 cut(s) 100, 378
CviJI RGCY 3 cut(s) 171, 214, 363
CviKI_1 RGCY 3 cut(s) 171, 214, 363
CviQI GTAC 1 cut(s) 183
DdeI CTNAG 2 cut(s) 57, 215
DpnI GATC 4 cut(s) 62, 232, 293, 375
DpnII GATC 4 cut(s) 60, 230, 291, 373
Eam1104I CTCTTC 1 cut(s) 243
EarI CTCTTC 1 cut(s) 243
FaeI CATG 2 cut(s) 103, 381
FaiI YATR 7 cut(s) 45, 101, 159, 345, 379, 398, 431
FalI AAGNNNNNCTT 1 cut(s) 436
FaqI GGGAC 1 cut(s) 368
FatI CATG 2 cut(s) 99, 377
FblI GTMKAC 2 cut(s) 267, 434
Hin1II CATG 2 cut(s) 103, 381
HinfI GANTC 1 cut(s) 447
HphI GGTGA 1 cut(s) 168
Hpy166II GTNNAC 2 cut(s) 268, 435
Hpy8I GTNNAC 2 cut(s) 268, 435
Hpy99I CGWCG 1 cut(s) 314
HpyAV CCTTC 1 cut(s) 185
HpyCH4III ACNGT 1 cut(s) 274
HpyCH4IV ACGT 1 cut(s) 312
HpyCH4V TGCA 3 cut(s) 73, 204, 417
HpyF3I CTNAG 2 cut(s) 57, 215
HpySE526I ACGT 1 cut(s) 312
Hsp92II CATG 2 cut(s) 103, 381
Kzo9I GATC 4 cut(s) 60, 230, 291, 373
LpnPI CCDG 3 cut(s) 185, 293, 349
MaeII ACGT 1 cut(s) 312
MaeIII GTNAC 2 cut(s) 174, 419
MalI GATC 4 cut(s) 62, 232, 293, 375
MboI GATC 4 cut(s) 60, 230, 291, 373
MboII GAAGA 2 cut(s) 230, 231
MflI RGATCY 2 cut(s) 60, 373
MluCI AATT 3 cut(s) 92, 146, 348
MnlI CCTC 5 cut(s) 150, 188, 256, 396, 397
MroXI GAANNNNTTC 1 cut(s) 451
MseI TTAA 4 cut(s) 96, 134, 252, 410
MslI CAYNNNNRTG 1 cut(s) 428
MspA1I CMGCKG 1 cut(s) 214
NdeII GATC 4 cut(s) 60, 230, 291, 373
NlaIII CATG 2 cut(s) 103, 381
NmeAIII GCCGAG 1 cut(s) 367
NmuCI GTSAC 2 cut(s) 174, 419
NspI RCATGY 1 cut(s) 103
PciI ACATGT 1 cut(s) 99
PdmI GAANNNNTTC 1 cut(s) 451
PfeI GAWTC 1 cut(s) 447
PscI ACATGT 1 cut(s) 99
PstI CTGCAG 1 cut(s) 419
PsuI RGATCY 2 cut(s) 60, 373
PvuII CAGCTG 1 cut(s) 214
RsaI GTAC 1 cut(s) 184
RsaNI GTAC 1 cut(s) 183
RseI CAYNNNNRTG 1 cut(s) 428
SaqAI TTAA 4 cut(s) 96, 134, 252, 410
Sau3AI GATC 4 cut(s) 60, 230, 291, 373
ScaI AGTACT 1 cut(s) 184
SetI ASST 7 cut(s) 142, 216, 247, 267, 315, 344, 365
SfcI CTRYAG 1 cut(s) 415
SmiMI CAYNNNNRTG 1 cut(s) 428
Sse9I AATT 3 cut(s) 92, 146, 348
SsiI CCGC 1 cut(s) 287
SspI AATATT 1 cut(s) 35
TaaI ACNGT 1 cut(s) 274
TaiI ACGT 1 cut(s) 315
TaqI TCGA 2 cut(s) 14, 294
TasI AATT 3 cut(s) 92, 146, 348
TatI WGTACW 1 cut(s) 182
TfiI GAWTC 1 cut(s) 447
Tru1I TTAA 4 cut(s) 96, 134, 252, 410
Tru9I TTAA 4 cut(s) 96, 134, 252, 410
TscAI CASTG 2 cut(s) 424, 430
TseFI GTSAC 2 cut(s) 174, 419
Tsp45I GTSAC 2 cut(s) 174, 419
TspDTI ATGAA 2 cut(s) 318, 360
TspRI CASTG 2 cut(s) 424, 430
XapI RAATTY 2 cut(s) 92, 146
XceI RCATGY 1 cut(s) 103
XmiI GTMKAC 2 cut(s) 267, 434
XmnI GAANNNNTTC 1 cut(s) 451
ZrmI AGTACT 1 cut(s) 184
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.