Rh5BG249700

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0000083
Physical Location & Seq
Reverse (-)
30624434 .. 30633431
8998 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG249700.1

Sequence Viewer

Length: 1485 bp
ATGTCTCAAATGTTCATGCAATTCCCTTTGGCACTTGTCGGTGCTTTCTCTGTGATGATGCTCCTAGTTCATGCCCTGCAGGATGGATCAGACTTCATTAGCATAGATTGTGGCCTACAACAAAATTCGGACTATACAGAAAGCACAACAACCATAAGATACGTTCCAGACACAAATTTCATTGATACTGGTGAGGGCAAGACCGTATCACGTGAGTATAACTTTCAGCAACAGTTTTGGTTCGTTAGGATCTTCCCTGAAGGAACCAGGAACTGTTACAAAATAAACATTAAAAGCGGGCAAAAGTATTTGATCCGAGCAAGCTTTGGGTATGGAAATTATGATGGGGAAAACAACTTACCTGAATTCGAACTGCATCTTGGAACTAGTTTGTGGGATTCTGTGGTGATTACTAGTGTGAATACTATCATAACTAAGGAGGTCATACATATCCCGACGCGAAATTACATACATGTTTGTATGGTTGACATAAATAAAGGAGTTCCATTTATATCGACTATAGAACTCAGGCGTTTACGTGATGAGAGTTATCAAACAGAAGTTGGGTCTTTGGCACTTGTTAAGCGACGAAACATGGCAGCGAATCACACCATATACAGGTACCCAAACGATGTTAATGATCGTATCTGGTATCCTGAATTCAGCGTCGATTGGAAAGAATTAAGTACTTCTTCCGTCATCGACACGGATCCAACCGCTTACCAACTCCCATCTGATGTCATGAGTACAGCTGCCACGCCAGCAGATATTTCAAGCAAATATTTAAGTTTTTCCTGGGAGCCTGTCGTCGGTAAAAATGCATCATATTATATATATATGCACTTTGCAGAAGTTGAAGAGATCAGCGCCAGCTGGTCTAGAGAGCTCACTATTACCATGAATGGAGAGCTTATTTCTAAGCCATTTGTTCCACGTTACTTGAACACAACAACGATTAACACCACGATTGCTGCGGAAGGAGGACAATATGATATTTCAATATATGCACCGGCGATAAACTATCGATCGATCCTGAACGCCTATGAGATTTATATGGAAAAAGAATTTTTAGTATCAGAAACAAACCAGCAAGACGTCGAAGCAATTACGAACCTCAAGTCAACTTATAAAATCATTAAGAATTGGCAAGGAGATCCGTGCAACCCTCAAGTTTACCTGTGGGAAGGTGTGAAGTGTAGCTTTTCTGACAATGACTCCGCACGAATCATATCCCTGGATTTGTCATCTAGTGGATTAACAGGCGAGATAGCTGCTTCTATAGCTAATCTCACAATGATACAGACTTTGTATGAATCTAAAACGATTGGCGACATTGTTAAACAAATATCAGATGTCAACGAGCAAAAGAAGAAAGAAGCTGGAAACTCAGTTGATGGGTTCGACAAAATATCCCCACAAGCGGTGGCCGGGTCAGTCAGCGTCTCAGAAACAAAGAGCGATGGATCTGGTGGTTCACCAGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

494

Amino Acids

55.43

Weight (kDa)

4.82

Isoelectric Point (pI)

37.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 35 - 352 4.9e-101 Malectin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1128
AatII GACGTC 1 cut(s) 1098
Acc65I GGTACC 1 cut(s) 621
AccB1I GGYRCC 1 cut(s) 621
AccII CGCG 1 cut(s) 460
AciI CCGC 5 cut(s) 297, 717, 974, 1218, 1421
AclWI GGATC 8 cut(s) 94, 257, 307, 704, 717, 1024, 1148, 1471
AcoI YGGCCR 1 cut(s) 1425
AcsI RAATTY 5 cut(s) 124, 175, 365, 659, 1064
AcuI CTGAAG 1 cut(s) 279
AcvI CACGTG 1 cut(s) 212
AcyI GRCGYC 1 cut(s) 1095
AfaI GTAC 3 cut(s) 623, 688, 748
AfiI CCNNNNNNNGG 3 cut(s) 618, 809, 1420
AflIII ACRYGT 1 cut(s) 472
AgsI TTSAA 4 cut(s) 774, 857, 943, 999
AhlI ACTAGT 2 cut(s) 386, 413
AjnI CCWGG 3 cut(s) 266, 794, 1233
AjuI GAANNNNNNNTTGG 2 cut(s) 363, 395
AluBI AGCT 9 cut(s) 324, 752, 873, 886, 910, 1200, 1271, 1283, 1379
AluI AGCT 9 cut(s) 324, 752, 873, 886, 910, 1200, 1271, 1283, 1379
Alw21I GWGCWC 1 cut(s) 888
Alw26I GTCTC 2 cut(s) 9, 1447
AlwI GGATC 8 cut(s) 94, 257, 307, 704, 717, 1024, 1148, 1471
AlwNI CAGNNNCTG 1 cut(s) 273
AoxI GGCC 2 cut(s) 112, 1425
ApeKI GCWGC 4 cut(s) 599, 752, 971, 1271
ApoI RAATTY 5 cut(s) 124, 175, 365, 659, 1064
ArsI GACNNNNNNTTYG 2 cut(s) 1103, 1135
Asp718I GGTACC 1 cut(s) 621
AspLEI GCGC 1 cut(s) 869
AsuC2I CCSGG 1 cut(s) 1429
AsuHPI GGTGA 3 cut(s) 203, 418, 1467
AsuII TTCGAA 1 cut(s) 369
BamHI GGATCC 1 cut(s) 709
BanI GGYRCC 1 cut(s) 621
BanII GRGCYC 1 cut(s) 888
BbrPI CACGTG 1 cut(s) 212
Bbv12I GWGCWC 1 cut(s) 888
BbvI GCAGC 4 cut(s) 611, 739, 958, 1258
BccI CCATC 5 cut(s) 77, 338, 739, 1388, 1454
BcgI CGANNNNNNTGC 2 cut(s) 1253, 1287
BciT130I CCWGG 3 cut(s) 268, 796, 1235
BciVI GTATCC 1 cut(s) 663
BcnI CCSGG 1 cut(s) 1429
BcoDI GTCTC 2 cut(s) 9, 1447
BcuI ACTAGT 2 cut(s) 386, 413
BfaI CTAG 5 cut(s) 65, 387, 414, 879, 1248
BfmI CTRYAG 3 cut(s) 77, 519, 1278
BfoI RGCGCY 1 cut(s) 870
BfuI GTATCC 1 cut(s) 663
BisI GCNGC 4 cut(s) 600, 753, 972, 1272
BlsI GCNGC 4 cut(s) 601, 754, 973, 1273
BmcAI AGTACT 1 cut(s) 688
Bme1390I CCNGG 4 cut(s) 268, 796, 1235, 1429
BmiI GGNNCC 4 cut(s) 265, 623, 711, 801
BmrFI CCNGG 4 cut(s) 268, 796, 1235, 1429
BmsI GCATC 3 cut(s) 48, 385, 830
Bpu14I TTCGAA 1 cut(s) 369
BpuEI CTTGAG 2 cut(s) 1100, 1152
BpuMI CCSGG 1 cut(s) 1429
Bsa29I ATCGAT 2 cut(s) 1024, 1028
BsaAI YACGTR 2 cut(s) 212, 539
BsaHI GRCGYC 1 cut(s) 1095
BsaJI CCNNGG 2 cut(s) 795, 1233
BsaXI ACNNNNNCTCC 2 cut(s) 1199, 1229
Bsc4I CCNNNNNNNGG 3 cut(s) 618, 809, 1420
Bse118I RCCGGY 1 cut(s) 1009
Bse1I ACTGG 2 cut(s) 193, 1478
BseBI CCWGG 3 cut(s) 268, 796, 1235
BseCI ATCGAT 2 cut(s) 1024, 1028
BseDI CCNNGG 2 cut(s) 795, 1233
BseGI GGATG 1 cut(s) 88
BseLI CCNNNNNNNGG 3 cut(s) 618, 809, 1420
BseMII CTCAG 3 cut(s) 541, 1401, 1458
BseNI ACTGG 2 cut(s) 193, 1478
BseXI GCAGC 4 cut(s) 611, 739, 958, 1258
Bsh1236I CGCG 1 cut(s) 460
Bsh1285I CGRYCG 1 cut(s) 1028
BshFI GGCC 2 cut(s) 114, 1427
BshNI GGYRCC 1 cut(s) 621
BshVI ATCGAT 2 cut(s) 1024, 1028
BsiEI CGRYCG 1 cut(s) 1028
BsiHKAI GWGCWC 1 cut(s) 888
BsiSI CCGG 2 cut(s) 1010, 1428
BslI CCNNNNNNNGG 3 cut(s) 618, 809, 1420
BsmAI GTCTC 2 cut(s) 9, 1447
BsmBI CGTCTC 1 cut(s) 1447
BsnI GGCC 2 cut(s) 114, 1427
Bsp119I TTCGAA 1 cut(s) 369
Bsp1286I GDGCHC 1 cut(s) 888
BspACI CCGC 5 cut(s) 297, 717, 974, 1218, 1421
BspANI GGCC 2 cut(s) 114, 1427
BspCNI CTCAG 3 cut(s) 540, 1400, 1457
BspDI ATCGAT 2 cut(s) 1024, 1028
BspFNI CGCG 1 cut(s) 460
BspHI TCATGA 1 cut(s) 741
BspLI GGNNCC 4 cut(s) 265, 623, 711, 801
BspMAI CTGCAG 1 cut(s) 81
BspPI GGATC 8 cut(s) 94, 257, 307, 704, 717, 1024, 1148, 1471
BspT104I TTCGAA 1 cut(s) 369
BspT107I GGYRCC 1 cut(s) 621
BsrFI RCCGGY 1 cut(s) 1009
BsrI ACTGG 2 cut(s) 193, 1478
BssAI RCCGGY 1 cut(s) 1009
BssECI CCNNGG 2 cut(s) 795, 1233
BssNI GRCGYC 1 cut(s) 1095
Bst2UI CCWGG 3 cut(s) 268, 796, 1235
Bst4CI ACNGT 3 cut(s) 205, 234, 275
Bst6I CTCTTC 1 cut(s) 852
BstACI GRCGYC 1 cut(s) 1095
BstBAI YACGTR 2 cut(s) 212, 539
BstBI TTCGAA 1 cut(s) 369
BstC8I GCNNGC 4 cut(s) 299, 322, 762, 871
BstDEI CTNAG 5 cut(s) 435, 527, 918, 1387, 1444
BstF5I GGATG 1 cut(s) 88
BstFNI CGCG 1 cut(s) 460
BstH2I RGCGCY 1 cut(s) 870
BstHHI GCGC 1 cut(s) 869
BstMAI GTCTC 2 cut(s) 9, 1447
BstMCI CGRYCG 1 cut(s) 1028
BstMWI GCNNNNNNNGC 2 cut(s) 761, 1280
BstNI CCWGG 3 cut(s) 268, 796, 1235
BstNSI RCATGY 1 cut(s) 476
BstSCI CCNGG 4 cut(s) 266, 794, 1233, 1427
BstSFI CTRYAG 3 cut(s) 77, 519, 1278
BstUI CGCG 1 cut(s) 460
BstV1I GCAGC 4 cut(s) 611, 739, 958, 1258
BstX2I RGATCY 4 cut(s) 249, 709, 1153, 1463
BstYI RGATCY 4 cut(s) 249, 709, 1153, 1463
Bsu15I ATCGAT 2 cut(s) 1024, 1028
BsuI GTATCC 1 cut(s) 663
BsuRI GGCC 2 cut(s) 114, 1427
BsuTUI ATCGAT 2 cut(s) 1024, 1028
BtgZI GCGATG 1 cut(s) 1473
BtsCI GGATG 1 cut(s) 88
Cac8I GCNNGC 4 cut(s) 299, 322, 762, 871
CaiI CAGNNNCTG 1 cut(s) 273
CciI TCATGA 1 cut(s) 741
CfoI GCGC 1 cut(s) 869
Cfr10I RCCGGY 1 cut(s) 1009
ClaI ATCGAT 2 cut(s) 1024, 1028
CseI GACGC 3 cut(s) 466, 655, 1429
Csp6I GTAC 3 cut(s) 622, 687, 747
CspCI CAANNNNNGTGG 2 cut(s) 921, 956
CviAII CATG 6 cut(s) 16, 71, 473, 595, 742, 898
CviQI GTAC 3 cut(s) 622, 687, 747
DdeI CTNAG 5 cut(s) 435, 527, 918, 1387, 1444
EaeI YGGCCR 1 cut(s) 1425
Eam1104I CTCTTC 1 cut(s) 852
EarI CTCTTC 1 cut(s) 852
Ecl136II GAGCTC 1 cut(s) 886
Eco24I GRGCYC 1 cut(s) 888
Eco53kI GAGCTC 1 cut(s) 886
Eco57I CTGAAG 1 cut(s) 279
Eco72I CACGTG 1 cut(s) 212
EcoICRI GAGCTC 1 cut(s) 886
EcoRI GAATTC 2 cut(s) 365, 659
EcoRII CCWGG 3 cut(s) 266, 794, 1233
EcoT22I ATGCAT 1 cut(s) 823
EcoT38I GRGCYC 1 cut(s) 888
Esp3I CGTCTC 1 cut(s) 1447
FaeI CATG 6 cut(s) 19, 74, 476, 598, 745, 901
FalI AAGNNNNNCTT 4 cut(s) 676, 708, 1184, 1216
FatI CATG 6 cut(s) 15, 70, 472, 594, 741, 897
FauI CCCGC 1 cut(s) 290
Fnu4HI GCNGC 4 cut(s) 600, 753, 972, 1272
FokI GGATG 1 cut(s) 95
FriOI GRGCYC 1 cut(s) 888
Fsp4HI GCNGC 4 cut(s) 600, 753, 972, 1272
FspBI CTAG 5 cut(s) 65, 387, 414, 879, 1248
GlaI GCGC 1 cut(s) 868
GluI GCNGC 4 cut(s) 600, 753, 972, 1272
HaeII RGCGCY 1 cut(s) 870
HaeIII GGCC 2 cut(s) 114, 1427
HapII CCGG 2 cut(s) 1010, 1428
HgaI GACGC 3 cut(s) 466, 655, 1429
HhaI GCGC 1 cut(s) 869
Hin1I GRCGYC 1 cut(s) 1095
Hin1II CATG 6 cut(s) 19, 74, 476, 598, 745, 901
Hin6I GCGC 1 cut(s) 867
HinP1I GCGC 1 cut(s) 867
HincII GTYRAC 3 cut(s) 487, 1122, 1357
HindII GTYRAC 3 cut(s) 487, 1122, 1357
HindIII AAGCTT 1 cut(s) 322
HinfI GANTC 5 cut(s) 398, 604, 1214, 1224, 1313
HpaII CCGG 2 cut(s) 1010, 1428
HphI GGTGA 3 cut(s) 203, 418, 1467
Hpy166II GTNNAC 6 cut(s) 487, 536, 1122, 1174, 1357, 1475
Hpy188I TCNGA 8 cut(s) 91, 130, 317, 736, 1078, 1207, 1351, 1447
Hpy188III TCNNGA 6 cut(s) 167, 454, 656, 742, 879, 1033
Hpy8I GTNNAC 6 cut(s) 487, 536, 1122, 1174, 1357, 1475
Hpy99I CGWCG 5 cut(s) 460, 591, 671, 812, 1100
HpyAV CCTTC 3 cut(s) 254, 971, 1178
HpyCH4III ACNGT 3 cut(s) 205, 234, 275
HpyCH4IV ACGT 5 cut(s) 162, 211, 538, 934, 1095
HpyCH4V TGCA 8 cut(s) 19, 79, 376, 821, 841, 848, 1007, 1161
HpyF10VI GCNNNNNNNGC 2 cut(s) 761, 1280
HpyF3I CTNAG 5 cut(s) 435, 527, 918, 1387, 1444
HpySE526I ACGT 5 cut(s) 162, 211, 538, 934, 1095
Hsp92I GRCGYC 1 cut(s) 1095
Hsp92II CATG 6 cut(s) 19, 74, 476, 598, 745, 901
HspAI GCGC 1 cut(s) 867
KpnI GGTACC 1 cut(s) 625
LmnI GCTCC 2 cut(s) 66, 799
Lsp1109I GCAGC 4 cut(s) 611, 739, 958, 1258
LweI GCATC 3 cut(s) 48, 385, 830
MaeI CTAG 5 cut(s) 65, 387, 414, 879, 1248
MaeII ACGT 5 cut(s) 162, 211, 538, 934, 1095
MaeIII GTNAC 2 cut(s) 275, 935
MboII GAAGA 4 cut(s) 244, 684, 869, 1381
MflI RGATCY 4 cut(s) 249, 709, 1153, 1463
MhlI GDGCHC 1 cut(s) 888
MlyI GAGTC 1 cut(s) 1208
MmeI TCCRAC 1 cut(s) 737
MnlI CCTC 5 cut(s) 187, 433, 974, 1124, 1176
Mph1103I ATGCAT 1 cut(s) 823
MspA1I CMGCKG 2 cut(s) 752, 873
MspI CCGG 2 cut(s) 1010, 1428
MspR9I CCNGG 4 cut(s) 268, 796, 1235, 1429
MvaI CCWGG 3 cut(s) 268, 796, 1235
MvnI CGCG 1 cut(s) 460
MwoI GCNNNNNNNGC 2 cut(s) 761, 1280
NciI CCSGG 1 cut(s) 1429
NlaIII CATG 6 cut(s) 19, 74, 476, 598, 745, 901
NlaIV GGNNCC 4 cut(s) 265, 623, 711, 801
NsiI ATGCAT 1 cut(s) 823
NspI RCATGY 1 cut(s) 476
NspV TTCGAA 1 cut(s) 369
PagI TCATGA 1 cut(s) 741
PciI ACATGT 1 cut(s) 472
PfeI GAWTC 4 cut(s) 398, 604, 1224, 1313
PkrI GCNGC 4 cut(s) 601, 754, 973, 1273
Ple19I CGATCG 1 cut(s) 1028
PleI GAGTC 1 cut(s) 1208
PmaCI CACGTG 1 cut(s) 212
PmlI CACGTG 1 cut(s) 212
PpsI GAGTC 1 cut(s) 1208
Ppu21I YACGTR 2 cut(s) 212, 539
PscI ACATGT 1 cut(s) 472
PsiI TTATAA 1 cut(s) 1128
Psp124BI GAGCTC 1 cut(s) 888
Psp6I CCWGG 3 cut(s) 266, 794, 1233
PspCI CACGTG 1 cut(s) 212
PspGI CCWGG 3 cut(s) 266, 794, 1233
PspN4I GGNNCC 4 cut(s) 265, 623, 711, 801
PstI CTGCAG 1 cut(s) 81
PstNI CAGNNNCTG 1 cut(s) 273
PsuI RGATCY 4 cut(s) 249, 709, 1153, 1463
PvuI CGATCG 1 cut(s) 1028
PvuII CAGCTG 2 cut(s) 752, 873
RsaI GTAC 3 cut(s) 623, 688, 748
RsaNI GTAC 3 cut(s) 622, 687, 747
SacI GAGCTC 1 cut(s) 888
SatI GCNGC 4 cut(s) 600, 753, 972, 1272
SbfI CCTGCAGG 1 cut(s) 81
ScaI AGTACT 1 cut(s) 688
SchI GAGTC 1 cut(s) 1208
ScrFI CCNGG 4 cut(s) 268, 796, 1235, 1429
SdaI CCTGCAGG 1 cut(s) 81
SduI GDGCHC 1 cut(s) 888
SfaNI GCATC 3 cut(s) 48, 385, 830
SfcI CTRYAG 3 cut(s) 77, 519, 1278
SfuI TTCGAA 1 cut(s) 369
SgrAI CRCCGGYG 1 cut(s) 1009
SmlI CTYRAG 2 cut(s) 1115, 1167
SmoI CTYRAG 2 cut(s) 1115, 1167
SpeI ACTAGT 2 cut(s) 386, 413
Sse8387I CCTGCAGG 1 cut(s) 81
SsiI CCGC 5 cut(s) 297, 717, 974, 1218, 1421
SspI AATATT 1 cut(s) 782
SspMI CTAG 5 cut(s) 65, 387, 414, 879, 1248
SstI GAGCTC 1 cut(s) 888
StyD4I CCNGG 4 cut(s) 266, 794, 1233, 1427
TaaI ACNGT 3 cut(s) 205, 234, 275
TaiI ACGT 5 cut(s) 165, 214, 541, 937, 1098
TaqI TCGA 8 cut(s) 369, 515, 669, 702, 1024, 1028, 1098, 1401
TatI WGTACW 2 cut(s) 686, 746
TfiI GAWTC 4 cut(s) 398, 604, 1224, 1313
TseI GCWGC 4 cut(s) 599, 752, 971, 1271
TspDTI ATGAA 6 cut(s) 4, 59, 85, 169, 914, 1326
TspGWI ACGGA 3 cut(s) 685, 722, 1146
XapI RAATTY 5 cut(s) 124, 175, 365, 659, 1064
XbaI TCTAGA 1 cut(s) 878
XceI RCATGY 1 cut(s) 476
XspI CTAG 5 cut(s) 65, 387, 414, 879, 1248
ZraI GACGTC 1 cut(s) 1096
ZrmI AGTACT 1 cut(s) 688
Zsp2I ATGCAT 1 cut(s) 823
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.