Prupe.3G055800_v2.0.a1

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000083
Physical Location & Seq
Forward (+)
3951462 .. 3956160
4699 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G055800.1

Sequence Viewer

Length: 2658 bp
ATGTTGTGGTCATTCACGCAACTCCACTTTGCACTGCTTGGTGGTTTCGCTCTTAATCTGATGCTGCTAGTTCATTCCCAAGATCTTCAATCAGGATTCATTAGCATAGATTGCGGCCTCCAAACAGATTCAAGTTATGCTGAAAACGTAACAAGCATTAACTATATTTCAGACGCAACCTTCATAGACACCGGCGAAAGTAAATCCATATCGCCTGATTACAGAGATAACTATACACAGCCATCCTGGTCTGTTAGGAGCTTCCCCGAAGGAGCCAGGAATTGTTACAAAATAAATGTTACACCAGGCAACAAATATTTTATGCGGGCGGGTTTTGCATATGGGAATTATGATGGCCAAAATAAGATACCAGAATTTGATCTACACCTTGGACCTAATTTATGGGATACAGTTAGGTTCGAATATGCCTCCCATGTAAGCACTTACAAAGAGCTCATACACATCGCACTTCGAAACTATATACATGTTTGTTTGGTGAACACAGGCTCTGGGGTTCCGTTTATATCTTATCTAGAACTCAGGCCTTTACCTAATGCATCTTATCAAACGACAACGGGGTCATTGGCACTTGTAACCCGGCGTGACATGGGCCAAAGACCTTATAGGAGAGGATACAGGTATCCATTCGATATTCATGATCGCTTCTGGAGTTACTATAATGAGCTTGATGAATGGACACAAGTAAGTACCTCATCCACCATCGAAACTGAATCTGACAACCCTTTCCAACCACCATCTGTAGTTATGAGTACTGCTTCGACGCCAAAAGATCCAAGTGATTCCTTGAGTATTATTTACGTATTGCCGGACATAAATGCAGAATATTATAGTTACCTGCACTTTGCAGAAGTTGAAAGGGTCAACCAATCTAGATTCCAATACATTTTTAGGAACGGACGCCGCACTTTTGGGCCATTTGCTCCTCCTCGGTACTTGTCCTATACCGTTTACAGCACTGGGGCCTGGAGTTCTTATGCACAATATGCTAATATTTCAATCACCAGGGCTGAGAACTCTACCCTTCCACCCATCCTCAATGCTTTCGAGATTTATATGGTTAAAAAATTTATAGAAGAAGAAACAAGCCAAGAAGATGTTGATGCAATGGCAAACATCAAGTCAACTTACAAAATCAAAAGGAATTGGCAAGGAGATCCATGTGCCCCTCAACATTTCGTTTGGGAAGGTGTAAAGTGTAACTACCAAGACTTTGAGTCACCAAGAATCATATCCTTGAACTTGTCCTCGAGTGGCTTAACAGGGGAGATAGCTGCTTCTATATCCAATCTCACAATGATACAGTCTTTGGATTTATCAAACAACAACTTAACAGGACCAATCCTAGACTTTTTGTCTAAACTCCCAAATTTGACTGTCCTAAATTTGGAGAAAAACAAGTTCACAGGCTCGGTTCCGGTAGGACTGATTGAAAGAAAGAATAGTGGTTTTCTGTCACTAAGTTTGTGCGATAATGCACATCTATCTCAATATGTTTCTTGCACATTGAAGAAGAAGCACAGTTTCGTTATTCCCATAGTAGTGTCAATCGCTGGAATTTTGATCCTCTTATCAGTTGTAGCAGCTATCTGCTGGTGGGGCTTCAAAAGGAAAAGGCAGCATGGAGATGTCATAGATGCAAAAGCCATCCCTCAATACGGGTCATTAGAATCAACAAAGCGACAGTTCACATATTCTGAGATAATAAAGATGACCAACAACTTTGAGAGGGTCCTCGGCAGAGGTGGATTTGGAACCGTGTATCATGGCTACATTGACCATACTCAAGTAGCTATAAAGATGCTTTCAGCATCATCTGTTCAAGGGTTCCAACAATTTCATGCAGAGGTTACTCTTCTTATGAGAGTTCATCATAAAAACTTGACAAGCCTTGTTGGATATTGCAACGACGAAACCAAAGTAGGGCTTGTCTACGAGTATATGGCCAATGGGAACTTATTGAACCATCTTTCAGATAGCAGATCAAGTATGTTGACTTGGGAAGATAGACTTCGAATAGCAACAGATGCTGCACAAGGGTTGGAGTATCTGCATTGTGGTTGTAAGCCACCGATAATGCACAGGGATGTGAAATCAACAAACATCTTGCTGAATGAAAGTTTCCAAGCCAAAATATCTGATTTTGGCCTATCCAGAAATTTCCCTACTCATGATGGAACTCATGCATCCAGCCTTCTTGCTGGCACTCCTGGCTACCTTGATCCTGAGTTCTACCTATCAAACAGGTTAAATGAGAAAAGTGACGTTTATAGCTTTGGGGTTGTGCTGTTGGAGATTATCACAAGCAGACCAGTTTTAACGAGGACGCATGAGAGAATTCACATAAGTCAATGGGTTGGTTTCATGCTTGCAAATGGAGACATTAACAACATCGTCGATCCGAGGTTAGAGGGAAATTTCAATACCAACTCCGTCTGGAAAGCTGTGGAAATAGCAATGGCATGTGTATCCGTAAATGCCATCAAGAGGCCAAGCATAAGCCAAGTAGTGGTGGATTTGAAGGAGTGTTTGGCAACAGAATGTGCTCGAACAAATCATAGCCGTGTAGCTGAATTGGATAATTCCAATGCGTTAATGGCTGACAATTCGATCGTTAGGCTAACTCCCTCCGTGAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

886

Amino Acids

99.73

Weight (kDa)

6.5

Isoelectric Point (pI)

40.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 577
Acc36I ACCTGC 1 cut(s) 864
AccB7I CCANNNNNTGG 1 cut(s) 2527
AccI GTMKAC 1 cut(s) 1950
AciI CCGC 4 cut(s) 114, 325, 329, 922
AclWI GGATC 5 cut(s) 785, 1169, 1576, 2234, 2411
AcoI YGGCCR 2 cut(s) 355, 1962
AcsI RAATTY 8 cut(s) 374, 1085, 1387, 1402, 1575, 2176, 2355, 2434
AcyI GRCGYC 2 cut(s) 782, 919
AfaI GTAC 3 cut(s) 709, 772, 953
AfiI CCNNNNNNNGG 6 cut(s) 1405, 1676, 1941, 2505, 2527, 2652
AflIII ACRYGT 1 cut(s) 484
AhdI GACNNNNNGTC 2 cut(s) 1234, 1372
AjnI CCWGG 6 cut(s) 245, 275, 304, 983, 1022, 2227
AjuI GAANNNNNNNTTGG 2 cut(s) 2531, 2563
AluBI AGCT 9 cut(s) 261, 454, 685, 1292, 1604, 1811, 2292, 2462, 2588
AluI AGCT 9 cut(s) 261, 454, 685, 1292, 1604, 1811, 2292, 2462, 2588
Alw21I GWGCWC 2 cut(s) 456, 2566
Alw26I GTCTC 1 cut(s) 2391
AlwI GGATC 5 cut(s) 785, 1169, 1576, 2234, 2411
AlwNI CAGNNNCTG 2 cut(s) 509, 2048
Ama87I CYCGRG 1 cut(s) 1267
AoxI GGCC 9 cut(s) 115, 355, 542, 610, 932, 981, 1962, 2164, 2507
ApeKI GCWGC 5 cut(s) 64, 1292, 1601, 1636, 2048
ApoI RAATTY 8 cut(s) 374, 1085, 1387, 1402, 1575, 2176, 2355, 2434
ArsI GACNNNNNNTTYG 2 cut(s) 1124, 1156
AspS9I GGNCC 6 cut(s) 392, 610, 932, 981, 1355, 1750
AsuC2I CCSGG 1 cut(s) 598
AsuHPI GGTGA 3 cut(s) 508, 1012, 1230
AsuII TTCGAA 3 cut(s) 420, 472, 2032
AvaI CYCGRG 1 cut(s) 1267
AvaII GGWCC 3 cut(s) 392, 1355, 1750
BaeGI GKGCMC 1 cut(s) 1186
BalI TGGCCA 2 cut(s) 357, 1964
BanII GRGCYC 1 cut(s) 456
Bbv12I GWGCWC 2 cut(s) 456, 2566
BbvI GCAGC 5 cut(s) 51, 1279, 1613, 1648, 2035
BccI CCATC 9 cut(s) 250, 347, 728, 763, 1058, 1673, 1992, 2186, 2507
BceAI ACGGC 1 cut(s) 2565
BciT130I CCWGG 6 cut(s) 247, 277, 306, 985, 1024, 2229
BciVI GTATCC 4 cut(s) 400, 626, 651, 2497
BcnI CCSGG 1 cut(s) 598
BcoDI GTCTC 1 cut(s) 2391
BfaI CTAG 4 cut(s) 68, 533, 891, 1364
BfmI CTRYAG 1 cut(s) 759
BfuAI ACCTGC 1 cut(s) 864
BfuI GTATCC 4 cut(s) 400, 626, 651, 2497
BglII AGATCT 1 cut(s) 82
BisI GCNGC 7 cut(s) 65, 115, 922, 1293, 1602, 1637, 2049
BlsI GCNGC 7 cut(s) 66, 116, 923, 1294, 1603, 1638, 2050
BmcAI AGTACT 1 cut(s) 772
Bme1390I CCNGG 7 cut(s) 247, 277, 306, 598, 985, 1024, 2229
Bme18I GGWCC 3 cut(s) 392, 1355, 1750
BmeRI GACNNNNNGTC 2 cut(s) 1234, 1372
BmeT110I CYCGRG 1 cut(s) 1267
BmgT120I GGNCC 6 cut(s) 392, 610, 932, 981, 1355, 1750
BmiI GGNNCC 7 cut(s) 274, 516, 982, 1434, 1751, 1774, 1847
BmrFI CCNGG 7 cut(s) 247, 277, 306, 598, 985, 1024, 2229
BmrI ACTGGG 1 cut(s) 987
BmsI GCATC 8 cut(s) 51, 566, 1111, 1645, 1809, 1838, 2035, 2213
BmuI ACTGGG 1 cut(s) 987
BpmI CTGGAG 2 cut(s) 688, 1006
Bpu14I TTCGAA 3 cut(s) 420, 472, 2032
BpuEI CTTGAG 2 cut(s) 826, 1788
BpuMI CCSGG 1 cut(s) 598
BsaAI YACGTR 1 cut(s) 820
BsaHI GRCGYC 2 cut(s) 782, 919
BsaJI CCNNGG 5 cut(s) 388, 947, 1023, 1753, 2420
BsaWI WCCGGW 1 cut(s) 1435
Bsc4I CCNNNNNNNGG 6 cut(s) 1405, 1676, 1941, 2505, 2527, 2652
Bse118I RCCGGY 1 cut(s) 191
Bse1I ACTGG 2 cut(s) 982, 2330
Bse3DI GCAATG 2 cut(s) 1131, 2481
BseBI CCWGG 6 cut(s) 247, 277, 306, 985, 1024, 2229
BseDI CCNNGG 5 cut(s) 388, 947, 1023, 1753, 2420
BseGI GGATG 6 cut(s) 242, 713, 1050, 1665, 2110, 2204
BseLI CCNNNNNNNGG 6 cut(s) 1405, 1676, 1941, 2505, 2527, 2652
BseMI GCAATG 2 cut(s) 1131, 2481
BseMII CTCAG 4 cut(s) 553, 1020, 1707, 2235
BseNI ACTGG 2 cut(s) 982, 2330
BseRI GAGGAG 2 cut(s) 933, 936
BseSI GKGCMC 1 cut(s) 1186
BseXI GCAGC 5 cut(s) 51, 1279, 1613, 1648, 2035
BsgI GTGCAG 2 cut(s) 842, 2034
Bsh1285I CGRYCG 1 cut(s) 2631
BshFI GGCC 9 cut(s) 117, 357, 544, 612, 934, 983, 1964, 2166, 2509
BsiEI CGRYCG 1 cut(s) 2631
BsiHKAI GWGCWC 2 cut(s) 456, 2566
BsiHKCI CYCGRG 1 cut(s) 1267
BsiSI CCGG 4 cut(s) 192, 598, 827, 1436
BslI CCNNNNNNNGG 6 cut(s) 1405, 1676, 1941, 2505, 2527, 2652
BsmAI GTCTC 1 cut(s) 2391
BsnI GGCC 9 cut(s) 117, 357, 544, 612, 934, 983, 1964, 2166, 2509
BsoBI CYCGRG 1 cut(s) 1267
Bsp119I TTCGAA 3 cut(s) 420, 472, 2032
Bsp1286I GDGCHC 3 cut(s) 456, 1186, 2566
BspACI CCGC 4 cut(s) 114, 325, 329, 922
BspANI GGCC 9 cut(s) 117, 357, 544, 612, 934, 983, 1964, 2166, 2509
BspCNI CTCAG 4 cut(s) 552, 1021, 1708, 2236
BspHI TCATGA 2 cut(s) 655, 2188
BspLI GGNNCC 7 cut(s) 274, 516, 982, 1434, 1751, 1774, 1847
BspMI ACCTGC 1 cut(s) 864
BspPI GGATC 5 cut(s) 785, 1169, 1576, 2234, 2411
BspT104I TTCGAA 3 cut(s) 420, 472, 2032
BsrDI GCAATG 2 cut(s) 1131, 2481
BsrFI RCCGGY 1 cut(s) 191
BsrI ACTGG 2 cut(s) 982, 2330
BssAI RCCGGY 1 cut(s) 191
BssECI CCNNGG 5 cut(s) 388, 947, 1023, 1753, 2420
BssNI GRCGYC 2 cut(s) 782, 919
BssT1I CCWWGG 1 cut(s) 388
Bst2UI CCWGG 6 cut(s) 247, 277, 306, 985, 1024, 2229
Bst4CI ACNGT 7 cut(s) 412, 967, 1323, 1396, 1541, 1704, 1777
Bst6I CTCTTC 1 cut(s) 1878
BstACI GRCGYC 2 cut(s) 782, 919
BstAPI GCANNNNNTGC 3 cut(s) 111, 1004, 2045
BstBAI YACGTR 1 cut(s) 820
BstBI TTCGAA 3 cut(s) 420, 472, 2032
BstC8I GCNNGC 3 cut(s) 327, 2221, 2388
BstDEI CTNAG 5 cut(s) 539, 1029, 1478, 1716, 2244
BstENI CCTNNNNNAGG 1 cut(s) 2650
BstF5I GGATG 6 cut(s) 242, 713, 1050, 1665, 2110, 2204
BstMAI GTCTC 1 cut(s) 2391
BstMCI CGRYCG 1 cut(s) 2631
BstMWI GCNNNNNNNGC 7 cut(s) 111, 335, 1004, 1617, 2045, 2229, 2615
BstNI CCWGG 6 cut(s) 247, 277, 306, 985, 1024, 2229
BstNSI RCATGY 2 cut(s) 488, 2484
BstSCI CCNGG 7 cut(s) 245, 275, 304, 596, 983, 1022, 2227
BstSFI CTRYAG 1 cut(s) 759
BstSLI GKGCMC 1 cut(s) 1186
BstSNI TACGTA 1 cut(s) 820
BstV1I GCAGC 5 cut(s) 51, 1279, 1613, 1648, 2035
BstX2I RGATCY 3 cut(s) 82, 790, 1174
BstYI RGATCY 3 cut(s) 82, 790, 1174
BsuI GTATCC 4 cut(s) 400, 626, 651, 2497
BsuRI GGCC 9 cut(s) 117, 357, 544, 612, 934, 983, 1964, 2166, 2509
BtgZI GCGATG 1 cut(s) 448
BtsCI GGATG 6 cut(s) 242, 713, 1050, 1665, 2110, 2204
BtsI GCAGTG 1 cut(s) 32
BtsIMutI CAGTG 2 cut(s) 32, 975
BveI ACCTGC 1 cut(s) 864
Cac8I GCNNGC 3 cut(s) 327, 2221, 2388
CaiI CAGNNNCTG 2 cut(s) 509, 2048
CciI TCATGA 2 cut(s) 655, 2188
Cfr10I RCCGGY 1 cut(s) 191
Cfr13I GGNCC 6 cut(s) 392, 610, 932, 981, 1355, 1750
CseI GACGC 4 cut(s) 182, 790, 927, 2353
Csp6I GTAC 3 cut(s) 708, 771, 952
CviQI GTAC 3 cut(s) 708, 771, 952
DdeI CTNAG 5 cut(s) 539, 1029, 1478, 1716, 2244
DrdI GACNNNNNNGTC 1 cut(s) 577
DriI GACNNNNNGTC 2 cut(s) 1234, 1372
DseDI GACNNNNNNGTC 1 cut(s) 577
EaeI YGGCCR 2 cut(s) 355, 1962
Eam1104I CTCTTC 1 cut(s) 1878
Eam1105I GACNNNNNGTC 2 cut(s) 1234, 1372
EarI CTCTTC 1 cut(s) 1878
Ecl136II GAGCTC 1 cut(s) 454
Eco105I TACGTA 1 cut(s) 820
Eco130I CCWWGG 1 cut(s) 388
Eco147I AGGCCT 1 cut(s) 544
Eco24I GRGCYC 1 cut(s) 456
Eco47I GGWCC 3 cut(s) 392, 1355, 1750
Eco53kI GAGCTC 1 cut(s) 454
Eco88I CYCGRG 1 cut(s) 1267
EcoICRI GAGCTC 1 cut(s) 454
EcoNI CCTNNNNNAGG 1 cut(s) 2650
EcoO109I RGGNCCY 2 cut(s) 981, 1750
EcoRI GAATTC 1 cut(s) 2355
EcoRII CCWGG 6 cut(s) 245, 275, 304, 983, 1022, 2227
EcoT14I CCWWGG 1 cut(s) 388
EcoT22I ATGCAT 2 cut(s) 559, 2206
EcoT38I GRGCYC 1 cut(s) 456
ErhI CCWWGG 1 cut(s) 388
FalI AAGNNNNNCTT 4 cut(s) 1929, 1961, 2013, 2045
FauI CCCGC 2 cut(s) 318, 322
FauNDI CATATG 1 cut(s) 340
FblI GTMKAC 1 cut(s) 1950
Fnu4HI GCNGC 7 cut(s) 65, 115, 922, 1293, 1602, 1637, 2049
FokI GGATG 6 cut(s) 229, 700, 1037, 1652, 2117, 2191
FriOI GRGCYC 1 cut(s) 456
Fsp4HI GCNGC 7 cut(s) 65, 115, 922, 1293, 1602, 1637, 2049
FspBI CTAG 4 cut(s) 68, 533, 891, 1364
GluI GCNGC 7 cut(s) 65, 115, 922, 1293, 1602, 1637, 2049
GsuI CTGGAG 2 cut(s) 688, 1006
HaeIII GGCC 9 cut(s) 117, 357, 544, 612, 934, 983, 1964, 2166, 2509
HapII CCGG 4 cut(s) 192, 598, 827, 1436
HgaI GACGC 4 cut(s) 182, 790, 927, 2353
Hin1I GRCGYC 2 cut(s) 782, 919
HincII GTYRAC 3 cut(s) 883, 1143, 2013
HindII GTYRAC 3 cut(s) 883, 1143, 2013
HinfI GANTC 8 cut(s) 96, 128, 731, 800, 894, 1235, 1245, 1688
HpaII CCGG 4 cut(s) 192, 598, 827, 1436
HphI GGTGA 3 cut(s) 508, 1012, 1230
Hpy166II GTNNAC 8 cut(s) 499, 883, 970, 1143, 1422, 1707, 1951, 2013
Hpy188I TCNGA 7 cut(s) 60, 172, 736, 1717, 1993, 2158, 2421
Hpy8I GTNNAC 8 cut(s) 499, 883, 970, 1143, 1422, 1707, 1951, 2013
Hpy99I CGWCG 3 cut(s) 784, 1931, 2417
HpyAV CCTTC 6 cut(s) 190, 263, 1052, 1199, 2222, 2533
HpyCH4III ACNGT 7 cut(s) 412, 967, 1323, 1396, 1541, 1704, 1777
HpyCH4IV ACGT 3 cut(s) 147, 819, 2283
HpyF10VI GCNNNNNNNGC 7 cut(s) 111, 335, 1004, 1617, 2045, 2229, 2615
HpyF3I CTNAG 5 cut(s) 539, 1029, 1478, 1716, 2244
HpySE526I ACGT 3 cut(s) 147, 819, 2283
Hsp92I GRCGYC 2 cut(s) 782, 919
LmnI GCTCC 3 cut(s) 258, 272, 946
Lsp1109I GCAGC 5 cut(s) 51, 1279, 1613, 1648, 2035
LweI GCATC 8 cut(s) 51, 566, 1111, 1645, 1809, 1838, 2035, 2213
MaeI CTAG 4 cut(s) 68, 533, 891, 1364
MaeII ACGT 3 cut(s) 147, 819, 2283
MboII GAAGA 8 cut(s) 77, 1106, 1109, 1124, 1540, 1543, 1865, 2033
MflI RGATCY 3 cut(s) 82, 790, 1174
MhlI GDGCHC 3 cut(s) 456, 1186, 2566
MlsI TGGCCA 2 cut(s) 357, 1964
MluNI TGGCCA 2 cut(s) 357, 1964
MlyI GAGTC 1 cut(s) 1244
MmeI TCCRAC 5 cut(s) 772, 1873, 1894, 2040, 2289
Mox20I TGGCCA 2 cut(s) 357, 1964
Mph1103I ATGCAT 2 cut(s) 559, 2206
MscI TGGCCA 2 cut(s) 357, 1964
MseI TTAA 9 cut(s) 54, 159, 1080, 1277, 1349, 2267, 2336, 2403, 2612
MslI CAYNNNNRTG 4 cut(s) 1559, 1644, 2103, 2580
Msp20I TGGCCA 2 cut(s) 357, 1964
MspI CCGG 4 cut(s) 192, 598, 827, 1436
MspR9I CCNGG 7 cut(s) 247, 277, 306, 598, 985, 1024, 2229
MvaI CCWGG 6 cut(s) 247, 277, 306, 985, 1024, 2229
MwoI GCNNNNNNNGC 7 cut(s) 111, 335, 1004, 1617, 2045, 2229, 2615
NciI CCSGG 1 cut(s) 598
NdeI CATATG 1 cut(s) 340
NlaIV GGNNCC 7 cut(s) 274, 516, 982, 1434, 1751, 1774, 1847
NmeAIII GCCGAG 1 cut(s) 1734
NmuCI GTSAC 4 cut(s) 602, 1236, 1473, 2279
NsiI ATGCAT 2 cut(s) 559, 2206
NspI RCATGY 2 cut(s) 488, 2484
NspV TTCGAA 3 cut(s) 420, 472, 2032
PaeR7I CTCGAG 1 cut(s) 1267
PagI TCATGA 2 cut(s) 655, 2188
PceI AGGCCT 1 cut(s) 544
PciI ACATGT 1 cut(s) 484
PfeI GAWTC 7 cut(s) 96, 128, 731, 800, 894, 1245, 1688
PflMI CCANNNNNTGG 1 cut(s) 2527
PkrI GCNGC 7 cut(s) 66, 116, 923, 1294, 1603, 1638, 2050
Ple19I CGATCG 1 cut(s) 2631
PleI GAGTC 1 cut(s) 1243
PpsI GAGTC 1 cut(s) 1243
Ppu21I YACGTR 1 cut(s) 820
PpuMI RGGWCCY 1 cut(s) 1750
PscI ACATGT 1 cut(s) 484
Psp124BI GAGCTC 1 cut(s) 456
Psp5II RGGWCCY 1 cut(s) 1750
Psp6I CCWGG 6 cut(s) 245, 275, 304, 983, 1022, 2227
PspGI CCWGG 6 cut(s) 245, 275, 304, 983, 1022, 2227
PspN4I GGNNCC 7 cut(s) 274, 516, 982, 1434, 1751, 1774, 1847
PspPI GGNCC 6 cut(s) 392, 610, 932, 981, 1355, 1750
PspPPI RGGWCCY 1 cut(s) 1750
PspXI VCTCGAGB 1 cut(s) 1267
PstNI CAGNNNCTG 2 cut(s) 509, 2048
PsuI RGATCY 3 cut(s) 82, 790, 1174
PvuI CGATCG 1 cut(s) 2631
RsaI GTAC 3 cut(s) 709, 772, 953
RsaNI GTAC 3 cut(s) 708, 771, 952
RseI CAYNNNNRTG 4 cut(s) 1559, 1644, 2103, 2580
SacI GAGCTC 1 cut(s) 456
SaqAI TTAA 9 cut(s) 54, 159, 1080, 1277, 1349, 2267, 2336, 2403, 2612
SatI GCNGC 7 cut(s) 65, 115, 922, 1293, 1602, 1637, 2049
Sau96I GGNCC 6 cut(s) 392, 610, 932, 981, 1355, 1750
ScaI AGTACT 1 cut(s) 772
SchI GAGTC 1 cut(s) 1244
ScrFI CCNGG 7 cut(s) 247, 277, 306, 598, 985, 1024, 2229
SduI GDGCHC 3 cut(s) 456, 1186, 2566
SfaNI GCATC 8 cut(s) 51, 566, 1111, 1645, 1809, 1838, 2035, 2213
SfcI CTRYAG 1 cut(s) 759
Sfr274I CTCGAG 1 cut(s) 1267
SfuI TTCGAA 3 cut(s) 420, 472, 2032
SgrAI CRCCGGYG 1 cut(s) 191
SinI GGWCC 3 cut(s) 392, 1355, 1750
SlaI CTCGAG 1 cut(s) 1267
SmiMI CAYNNNNRTG 4 cut(s) 1559, 1644, 2103, 2580
SmlI CTYRAG 3 cut(s) 805, 1267, 1803
SmoI CTYRAG 3 cut(s) 805, 1267, 1803
SnaBI TACGTA 1 cut(s) 820
SseBI AGGCCT 1 cut(s) 544
SsiI CCGC 4 cut(s) 114, 325, 329, 922
SspI AATATT 3 cut(s) 317, 845, 1012
SspMI CTAG 4 cut(s) 68, 533, 891, 1364
SstI GAGCTC 1 cut(s) 456
StuI AGGCCT 1 cut(s) 544
StyD4I CCNGG 7 cut(s) 245, 275, 304, 596, 983, 1022, 2227
StyI CCWWGG 1 cut(s) 388
TaaI ACNGT 7 cut(s) 412, 967, 1323, 1396, 1541, 1704, 1777
TaiI ACGT 3 cut(s) 150, 822, 2286
TatI WGTACW 1 cut(s) 770
TauI GCSGC 2 cut(s) 117, 924
TfiI GAWTC 7 cut(s) 96, 128, 731, 800, 894, 1245, 1688
Tru1I TTAA 9 cut(s) 54, 159, 1080, 1277, 1349, 2267, 2336, 2403, 2612
Tru9I TTAA 9 cut(s) 54, 159, 1080, 1277, 1349, 2267, 2336, 2403, 2612
TscAI CASTG 2 cut(s) 39, 982
TseFI GTSAC 4 cut(s) 602, 1236, 1473, 2279
TseI GCWGC 5 cut(s) 64, 1292, 1601, 1636, 2048
Tsp45I GTSAC 4 cut(s) 602, 1236, 1473, 2279
TspDTI ATGAA 9 cut(s) 62, 88, 172, 644, 705, 1847, 1877, 2148, 2371
TspGWI ACGGA 5 cut(s) 507, 930, 2440, 2479, 2638
TspRI CASTG 2 cut(s) 39, 982
Van91I CCANNNNNTGG 1 cut(s) 2527
VpaK11BI GGWCC 3 cut(s) 392, 1355, 1750
XagI CCTNNNNNAGG 1 cut(s) 2650
XapI RAATTY 8 cut(s) 374, 1085, 1387, 1402, 1575, 2176, 2355, 2434
XbaI TCTAGA 2 cut(s) 532, 890
XceI RCATGY 2 cut(s) 488, 2484
XcmI CCANNNNNNNNNTGG 1 cut(s) 2611
XhoI CTCGAG 1 cut(s) 1267
XmiI GTMKAC 1 cut(s) 1950
XspI CTAG 4 cut(s) 68, 533, 891, 1364
ZrmI AGTACT 1 cut(s) 772
Zsp2I ATGCAT 2 cut(s) 559, 2206
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.