RchiOBHm_Chr2g0141401

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
58981513 .. 58982633
1121 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ51170

Sequence Viewer

Length: 816 bp
ATGAGAGTTCATCATACAAACTTGACCAACCTTGTTGGATATTGCAATGAGGAAATAAATATAGGGCTCGTGTACGAGTATATGGCCAATGGAAACTTACAAGAACATCTGTCAGATGACAGTTCCACTACTTTGGGTTGGGAAGATAGACTTCGAATAGCAGTAGACGCTGCACAAGGATTGGAGTATCTGCATTATGGTTGTAAGCCACCTATAATTCACAAGGATGTGAAATCAGCAAACATCTTGCTGACTGAAAACTTCCAAGCCAAAGTATCTGATTTTGGCCTATCCAGAAATTTCCCTACAGACCTTGTGACTCATATAACAACTGGCGTTGCTGGTACTCCCGGGTACTACCTAACAAGCAGGTTAAATGAGAAAAGTGATGTTTATAGCTTTGGAATTGTGCTGTTGGAAATTATCACAAGCCGACCTGTTATATCAGGAGCTATTGAGAGAATTCACATTAGTCAATGGGTTGCTTCCATGCTTGCGCAAGGAGACATTTACAGTATTGTTGATCCAAGATTCTCTCTAAATGCTAACTATGTGTGGAAAGTTTTGGAGATAGCAATGGTATGTATATCTCCAGACCCCGTCAAAAGGCCAATGATGAGTCAGGTAGTGATGGAACTGAAGGAGTGTTTGGCAACAGAACTGGCTCGAACAAAGCAGAGAGGAAATGAAACTGGTTTAGGATATTCCACTGTGATGATACGTCTCAGAATGAGTCGATCAGAGTACATCCCTCAGTTATTGCAACTTAATTTATCTAAAACGCAGTCGCATGTCTCATATTTATCGGGAAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

271

Amino Acids

30.44

Weight (kDa)

6.45

Isoelectric Point (pI)

45.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 2 - 213 6.8e-32 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 2 - 210 2.4e-27 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 498
Acc36I ACCTGC 1 cut(s) 360
AccI GTMKAC 1 cut(s) 165
AclWI GGATC 1 cut(s) 518
AcoI YGGCCR 1 cut(s) 84
AcsI RAATTY 2 cut(s) 298, 462
AcuI CTGAAG 1 cut(s) 659
AfaI GTAC 4 cut(s) 74, 346, 356, 746
AfiI CCNNNNNNNGG 1 cut(s) 606
AjuI GAANNNNNNNTTGG 2 cut(s) 632, 664
AluBI AGCT 2 cut(s) 399, 452
AluI AGCT 2 cut(s) 399, 452
Alw26I GTCTC 3 cut(s) 498, 728, 799
AlwI GGATC 1 cut(s) 518
Ama87I CYCGRG 1 cut(s) 350
AoxI GGCC 3 cut(s) 84, 286, 608
ApeKI GCWGC 1 cut(s) 170
ApoI RAATTY 2 cut(s) 298, 462
AspLEI GCGC 1 cut(s) 499
AsuC2I CCSGG 2 cut(s) 351, 352
AsuII TTCGAA 1 cut(s) 154
AvaI CYCGRG 1 cut(s) 350
BalI TGGCCA 1 cut(s) 86
BanII GRGCYC 1 cut(s) 69
BauI CACGAG 1 cut(s) 68
BbvI GCAGC 1 cut(s) 157
BccI CCATC 1 cut(s) 625
BcnI CCSGG 2 cut(s) 351, 352
BcoDI GTCTC 3 cut(s) 498, 728, 799
BfmI CTRYAG 1 cut(s) 306
BfuAI ACCTGC 1 cut(s) 360
BisI GCNGC 1 cut(s) 171
BlsI GCNGC 1 cut(s) 172
Bme1390I CCNGG 2 cut(s) 351, 352
BmeT110I CYCGRG 1 cut(s) 350
BmrFI CCNGG 2 cut(s) 351, 352
BpmI CTGGAG 1 cut(s) 576
Bpu14I TTCGAA 1 cut(s) 154
BpuMI CCSGG 2 cut(s) 351, 352
BsaJI CCNNGG 1 cut(s) 350
Bsc4I CCNNNNNNNGG 1 cut(s) 606
Bse1I ACTGG 3 cut(s) 337, 666, 697
Bse3DI GCAATG 2 cut(s) 52, 582
BseDI CCNNGG 1 cut(s) 350
BseGI GGATG 2 cut(s) 232, 747
BseLI CCNNNNNNNGG 1 cut(s) 606
BseMI GCAATG 2 cut(s) 52, 582
BseMII CTCAG 2 cut(s) 739, 767
BseNI ACTGG 3 cut(s) 337, 666, 697
BseXI GCAGC 1 cut(s) 157
BsgI GTGCAG 1 cut(s) 156
BshFI GGCC 3 cut(s) 86, 288, 610
BsiHKCI CYCGRG 1 cut(s) 350
BsiSI CCGG 1 cut(s) 351
BslI CCNNNNNNNGG 1 cut(s) 606
BsmAI GTCTC 3 cut(s) 498, 728, 799
BsmBI CGTCTC 1 cut(s) 728
BsnI GGCC 3 cut(s) 86, 288, 610
BsoBI CYCGRG 1 cut(s) 350
Bsp119I TTCGAA 1 cut(s) 154
Bsp1286I GDGCHC 1 cut(s) 69
Bsp143I GATC 2 cut(s) 523, 737
BspANI GGCC 3 cut(s) 86, 288, 610
BspCNI CTCAG 2 cut(s) 738, 766
BspMI ACCTGC 1 cut(s) 360
BspPI GGATC 1 cut(s) 518
BspT104I TTCGAA 1 cut(s) 154
BsrDI GCAATG 2 cut(s) 52, 582
BsrI ACTGG 3 cut(s) 337, 666, 697
BssECI CCNNGG 1 cut(s) 350
BssMI GATC 2 cut(s) 523, 737
BssSI CACGAG 1 cut(s) 68
Bst2BI CACGAG 1 cut(s) 68
Bst4CI ACNGT 3 cut(s) 122, 515, 712
BstBI TTCGAA 1 cut(s) 154
BstC8I GCNNGC 1 cut(s) 495
BstDEI CTNAG 2 cut(s) 725, 753
BstF5I GGATG 2 cut(s) 232, 747
BstHHI GCGC 1 cut(s) 499
BstKTI GATC 2 cut(s) 526, 740
BstMAI GTCTC 3 cut(s) 498, 728, 799
BstMBI GATC 2 cut(s) 523, 737
BstMWI GCNNNNNNNGC 1 cut(s) 167
BstNSI RCATGY 1 cut(s) 794
BstSCI CCNGG 2 cut(s) 349, 350
BstSFI CTRYAG 1 cut(s) 306
BstV1I GCAGC 1 cut(s) 157
BstXI CCANNNNNNTGG 1 cut(s) 133
BsuRI GGCC 3 cut(s) 86, 288, 610
BtsCI GGATG 2 cut(s) 232, 747
BtsIMutI CAGTG 1 cut(s) 708
BveI ACCTGC 1 cut(s) 360
Cac8I GCNNGC 1 cut(s) 495
CfoI GCGC 1 cut(s) 499
Cfr9I CCCGGG 1 cut(s) 350
CseI GACGC 1 cut(s) 176
Csp6I GTAC 4 cut(s) 73, 345, 355, 745
CviAII CATG 2 cut(s) 490, 791
CviQI GTAC 4 cut(s) 73, 345, 355, 745
DdeI CTNAG 2 cut(s) 725, 753
DpnI GATC 2 cut(s) 525, 739
DpnII GATC 2 cut(s) 523, 737
EaeI YGGCCR 1 cut(s) 84
Eco24I GRGCYC 1 cut(s) 69
Eco57I CTGAAG 1 cut(s) 659
Eco88I CYCGRG 1 cut(s) 350
EcoRI GAATTC 1 cut(s) 462
EcoT38I GRGCYC 1 cut(s) 69
Esp3I CGTCTC 1 cut(s) 728
FaeI CATG 2 cut(s) 493, 794
FalI AAGNNNNNCTT 2 cut(s) 135, 167
FatI CATG 2 cut(s) 489, 790
FblI GTMKAC 1 cut(s) 165
Fnu4HI GCNGC 1 cut(s) 171
FokI GGATG 2 cut(s) 239, 734
FriOI GRGCYC 1 cut(s) 69
Fsp4HI GCNGC 1 cut(s) 171
FspI TGCGCA 1 cut(s) 498
GlaI GCGC 1 cut(s) 498
GluI GCNGC 1 cut(s) 171
GsuI CTGGAG 1 cut(s) 576
HaeIII GGCC 3 cut(s) 86, 288, 610
HapII CCGG 1 cut(s) 351
HgaI GACGC 1 cut(s) 176
HhaI GCGC 1 cut(s) 499
Hin1II CATG 2 cut(s) 493, 794
Hin6I GCGC 1 cut(s) 497
HinP1I GCGC 1 cut(s) 497
HinfI GANTC 4 cut(s) 319, 531, 619, 733
HpaII CCGG 1 cut(s) 351
Hpy166II GTNNAC 2 cut(s) 73, 166
Hpy188I TCNGA 4 cut(s) 115, 280, 728, 742
Hpy188III TCNNGA 4 cut(s) 294, 447, 593, 807
Hpy8I GTNNAC 2 cut(s) 73, 166
HpyAV CCTTC 2 cut(s) 634, 804
HpyCH4III ACNGT 3 cut(s) 122, 515, 712
HpyCH4IV ACGT 1 cut(s) 721
HpyCH4V TGCA 4 cut(s) 45, 173, 193, 763
HpyF10VI GCNNNNNNNGC 1 cut(s) 167
HpyF3I CTNAG 2 cut(s) 725, 753
HpySE526I ACGT 1 cut(s) 721
Hsp92II CATG 2 cut(s) 493, 794
HspAI GCGC 1 cut(s) 497
Kzo9I GATC 2 cut(s) 523, 737
LmnI GCTCC 1 cut(s) 449
Lsp1109I GCAGC 1 cut(s) 157
MaeII ACGT 1 cut(s) 721
MaeIII GTNAC 1 cut(s) 316
MalI GATC 2 cut(s) 525, 739
MboI GATC 2 cut(s) 523, 737
MboII GAAGA 1 cut(s) 155
MhlI GDGCHC 1 cut(s) 69
MlsI TGGCCA 1 cut(s) 86
MluCI AATT 6 cut(s) 216, 298, 405, 420, 462, 769
MluNI TGGCCA 1 cut(s) 86
MlyI GAGTC 3 cut(s) 313, 628, 742
MmeI TCCRAC 2 cut(s) 16, 396
MnlI CCTC 3 cut(s) 43, 674, 762
Mox20I TGGCCA 1 cut(s) 86
MscI TGGCCA 1 cut(s) 86
MseI TTAA 2 cut(s) 374, 768
MslI CAYNNNNRTG 2 cut(s) 225, 713
Msp20I TGGCCA 1 cut(s) 86
MspI CCGG 1 cut(s) 351
MspR9I CCNGG 2 cut(s) 351, 352
MwoI GCNNNNNNNGC 1 cut(s) 167
NciI CCSGG 2 cut(s) 351, 352
NdeII GATC 2 cut(s) 523, 737
NlaIII CATG 2 cut(s) 493, 794
NmuCI GTSAC 1 cut(s) 316
NsbI TGCGCA 1 cut(s) 498
NspI RCATGY 1 cut(s) 794
NspV TTCGAA 1 cut(s) 154
PfeI GAWTC 1 cut(s) 531
PflFI GACNNNGTC 1 cut(s) 599
PkrI GCNGC 1 cut(s) 172
PleI GAGTC 3 cut(s) 313, 627, 741
PpsI GAGTC 3 cut(s) 313, 627, 741
PsyI GACNNNGTC 1 cut(s) 599
RsaI GTAC 4 cut(s) 74, 346, 356, 746
RsaNI GTAC 4 cut(s) 73, 345, 355, 745
RseI CAYNNNNRTG 2 cut(s) 225, 713
SaqAI TTAA 2 cut(s) 374, 768
SatI GCNGC 1 cut(s) 171
Sau3AI GATC 2 cut(s) 523, 737
SchI GAGTC 3 cut(s) 313, 628, 742
ScrFI CCNGG 2 cut(s) 351, 352
SduI GDGCHC 1 cut(s) 69
SfcI CTRYAG 1 cut(s) 306
SfuI TTCGAA 1 cut(s) 154
SmaI CCCGGG 1 cut(s) 352
SmiMI CAYNNNNRTG 2 cut(s) 225, 713
Sse9I AATT 6 cut(s) 216, 298, 405, 420, 462, 769
StyD4I CCNGG 2 cut(s) 349, 350
TaaI ACNGT 3 cut(s) 122, 515, 712
TaiI ACGT 1 cut(s) 724
TaqI TCGA 3 cut(s) 154, 667, 736
TasI AATT 6 cut(s) 216, 298, 405, 420, 462, 769
TatI WGTACW 1 cut(s) 744
TfiI GAWTC 1 cut(s) 531
Tru1I TTAA 2 cut(s) 374, 768
Tru9I TTAA 2 cut(s) 374, 768
TscAI CASTG 1 cut(s) 715
TseFI GTSAC 1 cut(s) 316
TseI GCWGC 1 cut(s) 170
Tsp45I GTSAC 1 cut(s) 316
TspDTI ATGAA 1 cut(s) 702
TspMI CCCGGG 1 cut(s) 350
TspRI CASTG 1 cut(s) 715
Tth111I GACNNNGTC 1 cut(s) 599
XapI RAATTY 2 cut(s) 298, 462
XceI RCATGY 1 cut(s) 794
XmaI CCCGGG 1 cut(s) 350
XmiI GTMKAC 1 cut(s) 165
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.