Rorug02G0367800

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
46849933 .. 46856961
7029 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0367800.1

Sequence Viewer

Length: 1686 bp
ATGCCAAGCCCAGTCCTGAAAGCTGGGAGCAGACCACCATGGGTGGGTTTGGGAGCGGCTGTTTGGGTCCAAATTGCTGCTGGCAATGCCTACAACTTCCCACTGTATTCTCCTTTGCTGAAATCCGTGCTGGGTTATAACCAGATGCAGCTGACCATTCTTGGAGTGGCCAGTGATATTGGAGAGAGTGTGGCTTTGCTTCCTGGGATTGCCTGCAACAAGTTCCCTCCTTGGGCTGTGCTTCTGGTTGGTTGTGTGCTCTGTTTCTTCGGCTATGGAGTTCTCTGGCTTGCTGTTAGTGAGACTGTTGCCAACATGCCTTATATTTTGTTGTTTATCACAATTCTCATTGCCATGAATAGCAATGCTTGGTTTGGCACAGCTGTGCTTGTTACCAACATGAGGAACTTCCCTCTCAGTAGAGGCACTGTTGCTGGCATTCTCAAGGGCTATATTGGGATTAGTGCTGCAGTTTATACAGTGGTATACAGTTTGGTGCTTAAAGAGTCTGCCTTAAATCTATTGCTGTTCCTTGCTCTTGGGCTTCCTGTTTTGTGTTTGGCCTTGATGTACTTTATTCGGCCATGTACTCCAGCTTCTGGAGAAGAGTCTTCAGAGCATGGCCATTTTCTCTTCACTCAAGTTGTCAGTGTTGTGCTTGCAGTCTATCTTCTCCTAATCACAGTAGTAAACCAGATGATATCCCTTAGTCAAGCAGTTTCTTATATTTTGATTGCTATTGTGGTTATCCTTCTGCTGTCCCCCCTTGCAATTCCTGTCAAAATGACATTATTTCCTGTAAGGGCCCGAATTGATTCTTCAGACCAACTTGCTCCACCAGAAGGTAATGCAACCCAAACAGATCCTTTGTTGACACCATCCTCATCAGCTACTAATCTTGGAAGTTTTCATGAGGCTGATGATTCTTCAGACGTGGAAACTCTTCTTGCTATTGGGGAAGGGGCAGTGACGAAGAAGAAAAGGAGACCTAAGAGGGGAGAGGATTTTAAGTTCCAAGAAGCTTTTATAAAGGCTGATTTCTGGCTGCTTTGGTTTGTATATTTTCTTGGGGTAGGTTCAGGAGTAACAGTGCTCAATAATTTAAGCCAGATTGGGGTTGCATTAGGCAGCGATGAAACGACAATATTGTTGTCTCTCTTCAGCTTTTGCAATTTTGTGGGTCGTTTGGGTTCAGGTGTTGTTTCTGAACACTTTGTCAAGAACAATACACTTCCTCGTACATTTTGGATGACATGTGCACATATATTGATGATCCTATCGTTCATTTTGTATGCGTTAGATCTCAGTGGTAGTCTCTATGCTGCAACTACTCTGCTTGGTATCTGCTATGGTGTTCAGTATTCTATGATGGTTCCAACTGTCTCCGAACTTTTTGGATTGAAACATTTTGGTATAAATTACGGCTTCATGTTAATAGGAAATCCTATTGGTGCAGTTCTTTTTTCAGTTCTTCTTGCTGGTAATTTATATGATGCTGAAGCTGCTAAACAAGGAACCTCCACCTGCATAGGTGCAGACTGTTTCAGGATCACATTTATAGTTTTAGCTGGCGTCTGTGGTTTGGGCACTATCTTGAGCATAATTTTGACAGTTAGGGTACGTCCCGTTTACCAAATGCTTTATGCCGGGGGTTCTTTCCGTTTGCCTGCAAGTGCAATCCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

561

Amino Acids

60.31

Weight (kDa)

7.51

Isoelectric Point (pI)

32.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nodulin-like PF06813 13 - 260 9.2e-89 Nodulin-like
NFD4_C PF23262 344 - 544 6.9e-29 NFD4, C-terminal domain
MFS_1 PF07690 350 - 542 4.5e-09 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 138, 1028
AarI CACCTGC 1 cut(s) 1532
Acc36I ACCTGC 1 cut(s) 1532
AccB7I CCANNNNNTGG 1 cut(s) 599
AccBSI CCGCTC 1 cut(s) 56
AccI GTMKAC 1 cut(s) 486
AciI CCGC 1 cut(s) 56
AclWI GGATC 3 cut(s) 857, 1267, 1556
AcoI YGGCCR 3 cut(s) 168, 581, 622
AcuI CTGAAG 5 cut(s) 597, 804, 912, 1144, 1518
AcyI GRCGYC 1 cut(s) 1572
AfaI GTAC 4 cut(s) 572, 589, 1240, 1620
AfiI CCNNNNNNNGG 7 cut(s) 44, 232, 402, 599, 842, 995, 1114
AflIII ACRYGT 1 cut(s) 1253
AgsI TTSAA 1 cut(s) 1402
AjiI CACGTC 1 cut(s) 934
AjnI CCWGG 1 cut(s) 202
AleI CACNNNNGTG 1 cut(s) 383
AloI GAACNNNNNNTCC 2 cut(s) 995, 1027
AluBI AGCT 9 cut(s) 23, 151, 383, 596, 890, 1022, 1164, 1502, 1568
AluI AGCT 9 cut(s) 23, 151, 383, 596, 890, 1022, 1164, 1502, 1568
Alw21I GWGCWC 3 cut(s) 261, 1095, 1261
Alw26I GTCTC 5 cut(s) 296, 979, 1158, 1319, 1387
Alw44I GTGCAC 1 cut(s) 1257
AlwI GGATC 3 cut(s) 857, 1267, 1556
AlwNI CAGNNNCTG 1 cut(s) 599
AoxI GGCC 5 cut(s) 168, 561, 581, 622, 804
ApaI GGGCCC 1 cut(s) 808
ApaLI GTGCAC 1 cut(s) 1257
ApeKI GCWGC 7 cut(s) 77, 148, 467, 1045, 1128, 1322, 1502
Asp700I GAANNNNTTC 2 cut(s) 814, 942
AspS9I GGNCC 3 cut(s) 67, 804, 805
AsuC2I CCSGG 1 cut(s) 1648
AvaII GGWCC 1 cut(s) 67
BaeGI GKGCMC 3 cut(s) 808, 1261, 1589
BalI TGGCCA 2 cut(s) 170, 624
BanII GRGCYC 1 cut(s) 808
BarI GAAGNNNNNNTAC 2 cut(s) 580, 612
BbsI GAAGAC 1 cut(s) 603
Bbv12I GWGCWC 3 cut(s) 261, 1095, 1261
BbvI GCAGC 7 cut(s) 64, 160, 454, 1032, 1140, 1309, 1489
BccI CCATC 2 cut(s) 886, 1363
BceAI ACGGC 1 cut(s) 1438
BciT130I CCWGG 1 cut(s) 204
BcnI CCSGG 1 cut(s) 1648
BcoDI GTCTC 5 cut(s) 296, 979, 1158, 1319, 1387
BfmI CTRYAG 1 cut(s) 468
BfuAI ACCTGC 1 cut(s) 1532
BglII AGATCT 1 cut(s) 1300
BisI GCNGC 8 cut(s) 57, 78, 149, 468, 1046, 1129, 1323, 1503
BlsI GCNGC 8 cut(s) 58, 79, 150, 469, 1047, 1130, 1324, 1504
Bme1390I CCNGG 2 cut(s) 204, 1648
Bme18I GGWCC 1 cut(s) 67
BmgBI CACGTC 1 cut(s) 934
BmgT120I GGNCC 3 cut(s) 67, 804, 805
BmiI GGNNCC 4 cut(s) 68, 806, 1374, 1516
BmrFI CCNGG 2 cut(s) 204, 1648
BmrI ACTGGG 1 cut(s) 5
BmsI GCATC 2 cut(s) 135, 1483
BmuI ACTGGG 1 cut(s) 5
BpiI GAAGAC 1 cut(s) 603
BpmI CTGGAG 2 cut(s) 576, 621
BpuEI CTTGAG 3 cut(s) 428, 624, 1615
BpuMI CCSGG 1 cut(s) 1648
BsaHI GRCGYC 1 cut(s) 1572
BsaI GGTCTC 1 cut(s) 979
BsaJI CCNNGG 4 cut(s) 38, 203, 230, 1647
BsaXI ACNNNNNCTCC 6 cut(s) 45, 75, 174, 204, 1074, 1104
Bsc4I CCNNNNNNNGG 7 cut(s) 44, 232, 402, 599, 842, 995, 1114
Bse1I ACTGG 2 cut(s) 11, 171
Bse3DI GCAATG 3 cut(s) 91, 348, 370
BseBI CCWGG 1 cut(s) 204
BseDI CCNNGG 4 cut(s) 38, 203, 230, 1647
BseGI GGATG 2 cut(s) 878, 1254
BseLI CCNNNNNNNGG 7 cut(s) 44, 232, 402, 599, 842, 995, 1114
BseMI GCAATG 3 cut(s) 91, 348, 370
BseMII CTCAG 2 cut(s) 430, 1318
BseNI ACTGG 2 cut(s) 11, 171
BseSI GKGCMC 3 cut(s) 808, 1261, 1589
BseXI GCAGC 7 cut(s) 64, 160, 454, 1032, 1140, 1309, 1489
BseYI CCCAGC 2 cut(s) 23, 130
BsgI GTGCAG 2 cut(s) 1473, 1554
BshFI GGCC 5 cut(s) 170, 563, 583, 624, 806
BsiHKAI GWGCWC 3 cut(s) 261, 1095, 1261
BsiSI CCGG 1 cut(s) 1647
BslFI GGGAC 2 cut(s) 745, 1608
BslI CCNNNNNNNGG 7 cut(s) 44, 232, 402, 599, 842, 995, 1114
BsmAI GTCTC 5 cut(s) 296, 979, 1158, 1319, 1387
BsmFI GGGAC 2 cut(s) 745, 1608
BsmI GAATGC 1 cut(s) 438
BsnI GGCC 5 cut(s) 170, 563, 583, 624, 806
Bso31I GGTCTC 1 cut(s) 979
Bsp120I GGGCCC 1 cut(s) 804
Bsp1286I GDGCHC 5 cut(s) 261, 808, 1095, 1261, 1589
Bsp143I GATC 4 cut(s) 862, 1272, 1300, 1548
Bsp19I CCATGG 1 cut(s) 38
BspACI CCGC 1 cut(s) 56
BspANI GGCC 5 cut(s) 170, 563, 583, 624, 806
BspCNI CTCAG 2 cut(s) 429, 1317
BspHI TCATGA 1 cut(s) 910
BspLI GGNNCC 4 cut(s) 68, 806, 1374, 1516
BspMAI CTGCAG 1 cut(s) 472
BspMI ACCTGC 1 cut(s) 1532
BspPI GGATC 3 cut(s) 857, 1267, 1556
BspTNI GGTCTC 1 cut(s) 979
BsrBI CCGCTC 1 cut(s) 56
BsrDI GCAATG 3 cut(s) 91, 348, 370
BsrI ACTGG 2 cut(s) 11, 171
BssECI CCNNGG 4 cut(s) 38, 203, 230, 1647
BssMI GATC 4 cut(s) 862, 1272, 1300, 1548
BssNAI GTATAC 1 cut(s) 487
BssNI GRCGYC 1 cut(s) 1572
BssT1I CCWWGG 2 cut(s) 38, 230
Bst1107I GTATAC 1 cut(s) 487
Bst2UI CCWGG 1 cut(s) 204
Bst6I CTCTTC 4 cut(s) 600, 638, 948, 1163
BstACI GRCGYC 1 cut(s) 1572
BstC8I GCNNGC 7 cut(s) 82, 214, 291, 436, 660, 1570, 1668
BstDEI CTNAG 4 cut(s) 416, 707, 990, 1304
BstDSI CCRYGG 1 cut(s) 38
BstF5I GGATG 2 cut(s) 878, 1254
BstKTI GATC 4 cut(s) 865, 1275, 1303, 1551
BstMAI GTCTC 5 cut(s) 296, 979, 1158, 1319, 1387
BstMBI GATC 4 cut(s) 862, 1272, 1300, 1548
BstMWI GCNNNNNNNGC 2 cut(s) 86, 1502
BstNI CCWGG 1 cut(s) 204
BstNSI RCATGY 2 cut(s) 319, 1257
BstSCI CCNGG 2 cut(s) 202, 1646
BstSFI CTRYAG 1 cut(s) 468
BstSLI GKGCMC 3 cut(s) 808, 1261, 1589
BstV1I GCAGC 7 cut(s) 64, 160, 454, 1032, 1140, 1309, 1489
BstV2I GAAGAC 1 cut(s) 603
BstX2I RGATCY 2 cut(s) 862, 1300
BstYI RGATCY 2 cut(s) 862, 1300
BstZ17I GTATAC 1 cut(s) 487
BsuRI GGCC 5 cut(s) 170, 563, 583, 624, 806
BtgI CCRYGG 1 cut(s) 38
BtgZI GCGATG 1 cut(s) 1146
BtrI CACGTC 1 cut(s) 934
BtsCI GGATG 2 cut(s) 878, 1254
BtsI GCAGTG 1 cut(s) 972
BtsIMutI CAGTG 9 cut(s) 101, 178, 426, 486, 655, 972, 1095, 1312, 1681
BveI ACCTGC 1 cut(s) 1532
Cac8I GCNNGC 7 cut(s) 82, 214, 291, 436, 660, 1570, 1668
CaiI CAGNNNCTG 1 cut(s) 599
CciI TCATGA 1 cut(s) 910
Cfr13I GGNCC 3 cut(s) 67, 804, 805
CseI GACGC 1 cut(s) 1561
Csp6I GTAC 4 cut(s) 571, 588, 1239, 1619
CviAII CATG 9 cut(s) 39, 316, 355, 400, 585, 620, 911, 1254, 1429
CviQI GTAC 4 cut(s) 571, 588, 1239, 1619
DdeI CTNAG 4 cut(s) 416, 707, 990, 1304
DpnI GATC 4 cut(s) 864, 1274, 1302, 1550
DpnII GATC 4 cut(s) 862, 1272, 1300, 1548
EaeI YGGCCR 3 cut(s) 168, 581, 622
Eam1104I CTCTTC 4 cut(s) 600, 638, 948, 1163
EarI CTCTTC 4 cut(s) 600, 638, 948, 1163
Eco130I CCWWGG 2 cut(s) 38, 230
Eco24I GRGCYC 1 cut(s) 808
Eco31I GGTCTC 1 cut(s) 979
Eco32I GATATC 1 cut(s) 702
Eco47I GGWCC 1 cut(s) 67
Eco57I CTGAAG 5 cut(s) 597, 804, 912, 1144, 1518
EcoO109I RGGNCCY 1 cut(s) 804
EcoRII CCWGG 1 cut(s) 202
EcoRV GATATC 1 cut(s) 702
EcoT14I CCWWGG 2 cut(s) 38, 230
EcoT38I GRGCYC 1 cut(s) 808
ErhI CCWWGG 2 cut(s) 38, 230
FaeI CATG 9 cut(s) 42, 319, 358, 403, 588, 623, 914, 1257, 1432
FaqI GGGAC 2 cut(s) 745, 1608
FatI CATG 9 cut(s) 38, 315, 354, 399, 584, 619, 910, 1253, 1428
FblI GTMKAC 1 cut(s) 486
Fnu4HI GCNGC 8 cut(s) 57, 78, 149, 468, 1046, 1129, 1323, 1503
FokI GGATG 2 cut(s) 865, 1261
FriOI GRGCYC 1 cut(s) 808
Fsp4HI GCNGC 8 cut(s) 57, 78, 149, 468, 1046, 1129, 1323, 1503
GluI GCNGC 8 cut(s) 57, 78, 149, 468, 1046, 1129, 1323, 1503
GsaI CCCAGC 2 cut(s) 27, 134
GsuI CTGGAG 2 cut(s) 576, 621
HaeIII GGCC 5 cut(s) 170, 563, 583, 624, 806
HapII CCGG 1 cut(s) 1647
HgaI GACGC 1 cut(s) 1561
Hin1I GRCGYC 1 cut(s) 1572
Hin1II CATG 9 cut(s) 42, 319, 358, 403, 588, 623, 914, 1257, 1432
HincII GTYRAC 1 cut(s) 873
HindII GTYRAC 1 cut(s) 873
HindIII AAGCTT 1 cut(s) 1020
HinfI GANTC 4 cut(s) 506, 608, 815, 923
HpaII CCGG 1 cut(s) 1647
Hpy166II GTNNAC 5 cut(s) 487, 691, 873, 1259, 1630
Hpy188I TCNGA 5 cut(s) 616, 823, 931, 1207, 1387
Hpy188III TCNNGA 7 cut(s) 16, 600, 911, 1080, 1219, 1546, 1594
Hpy8I GTNNAC 5 cut(s) 487, 691, 873, 1259, 1630
HpyAV CCTTC 3 cut(s) 761, 836, 953
HpyCH4IV ACGT 2 cut(s) 933, 1621
HpyF10VI GCNNNNNNNGC 2 cut(s) 86, 1502
HpyF3I CTNAG 4 cut(s) 416, 707, 990, 1304
HpySE526I ACGT 2 cut(s) 933, 1621
Hsp92I GRCGYC 1 cut(s) 1572
Hsp92II CATG 9 cut(s) 42, 319, 358, 403, 588, 623, 914, 1257, 1432
Kzo9I GATC 4 cut(s) 862, 1272, 1300, 1548
LmnI GCTCC 3 cut(s) 27, 53, 838
Lsp1109I GCAGC 7 cut(s) 64, 160, 454, 1032, 1140, 1309, 1489
LweI GCATC 2 cut(s) 135, 1483
MaeII ACGT 2 cut(s) 933, 1621
MaeIII GTNAC 3 cut(s) 391, 967, 1084
MalI GATC 4 cut(s) 864, 1274, 1302, 1550
MbiI CCGCTC 1 cut(s) 56
MboI GATC 4 cut(s) 862, 1272, 1300, 1548
MflI RGATCY 2 cut(s) 862, 1300
MhlI GDGCHC 5 cut(s) 261, 808, 1095, 1261, 1589
MlsI TGGCCA 2 cut(s) 170, 624
MluCI AATT 9 cut(s) 72, 342, 771, 810, 1099, 1171, 1417, 1483, 1602
MluNI TGGCCA 2 cut(s) 170, 624
MlyI GAGTC 2 cut(s) 515, 617
MmeI TCCRAC 1 cut(s) 1400
Mox20I TGGCCA 2 cut(s) 170, 624
MroXI GAANNNNTTC 2 cut(s) 814, 942
MscI TGGCCA 2 cut(s) 170, 624
MseI TTAA 5 cut(s) 501, 515, 1008, 1103, 1433
MslI CAYNNNNRTG 2 cut(s) 353, 383
Msp20I TGGCCA 2 cut(s) 170, 624
MspA1I CMGCKG 2 cut(s) 151, 383
MspI CCGG 1 cut(s) 1647
MspR9I CCNGG 2 cut(s) 204, 1648
Mva1269I GAATGC 1 cut(s) 438
MvaI CCWGG 1 cut(s) 204
MwoI GCNNNNNNNGC 2 cut(s) 86, 1502
NciI CCSGG 1 cut(s) 1648
NcoI CCATGG 1 cut(s) 38
NdeII GATC 4 cut(s) 862, 1272, 1300, 1548
NlaIII CATG 9 cut(s) 42, 319, 358, 403, 588, 623, 914, 1257, 1432
NlaIV GGNNCC 4 cut(s) 68, 806, 1374, 1516
NmuCI GTSAC 1 cut(s) 967
NspI RCATGY 2 cut(s) 319, 1257
OliI CACNNNNGTG 1 cut(s) 383
PagI TCATGA 1 cut(s) 910
PaqCI CACCTGC 1 cut(s) 1532
PciI ACATGT 1 cut(s) 1253
PctI GAATGC 1 cut(s) 438
PdmI GAANNNNTTC 2 cut(s) 814, 942
PfeI GAWTC 2 cut(s) 815, 923
PflMI CCANNNNNTGG 1 cut(s) 599
PkrI GCNGC 8 cut(s) 58, 79, 150, 469, 1047, 1130, 1324, 1504
PleI GAGTC 2 cut(s) 514, 616
PpsI GAGTC 2 cut(s) 514, 616
PscI ACATGT 1 cut(s) 1253
PsiI TTATAA 2 cut(s) 138, 1028
Psp6I CCWGG 1 cut(s) 202
PspFI CCCAGC 2 cut(s) 23, 130
PspGI CCWGG 1 cut(s) 202
PspN4I GGNNCC 4 cut(s) 68, 806, 1374, 1516
PspOMI GGGCCC 1 cut(s) 804
PspPI GGNCC 3 cut(s) 67, 804, 805
PstI CTGCAG 1 cut(s) 472
PstNI CAGNNNCTG 1 cut(s) 599
PsuI RGATCY 2 cut(s) 862, 1300
PvuII CAGCTG 2 cut(s) 151, 383
RsaI GTAC 4 cut(s) 572, 589, 1240, 1620
RsaNI GTAC 4 cut(s) 571, 588, 1239, 1619
RseI CAYNNNNRTG 2 cut(s) 353, 383
SaqAI TTAA 5 cut(s) 501, 515, 1008, 1103, 1433
SatI GCNGC 8 cut(s) 57, 78, 149, 468, 1046, 1129, 1323, 1503
Sau3AI GATC 4 cut(s) 862, 1272, 1300, 1548
Sau96I GGNCC 3 cut(s) 67, 804, 805
SchI GAGTC 2 cut(s) 515, 617
ScrFI CCNGG 2 cut(s) 204, 1648
SduI GDGCHC 5 cut(s) 261, 808, 1095, 1261, 1589
SfaNI GCATC 2 cut(s) 135, 1483
SfcI CTRYAG 1 cut(s) 468
SinI GGWCC 1 cut(s) 67
SmiMI CAYNNNNRTG 2 cut(s) 353, 383
SmlI CTYRAG 3 cut(s) 443, 639, 1594
SmoI CTYRAG 3 cut(s) 443, 639, 1594
Sse9I AATT 9 cut(s) 72, 342, 771, 810, 1099, 1171, 1417, 1483, 1602
SsiI CCGC 1 cut(s) 56
SspI AATATT 1 cut(s) 1146
StyD4I CCNGG 2 cut(s) 202, 1646
StyI CCWWGG 2 cut(s) 38, 230
TaiI ACGT 2 cut(s) 936, 1624
TasI AATT 9 cut(s) 72, 342, 771, 810, 1099, 1171, 1417, 1483, 1602
TatI WGTACW 2 cut(s) 570, 587
TauI GCSGC 1 cut(s) 59
TfiI GAWTC 2 cut(s) 815, 923
Tru1I TTAA 5 cut(s) 501, 515, 1008, 1103, 1433
Tru9I TTAA 5 cut(s) 501, 515, 1008, 1103, 1433
TscAI CASTG 8 cut(s) 108, 178, 433, 486, 655, 972, 1095, 1312
TseFI GTSAC 1 cut(s) 967
TseI GCWGC 7 cut(s) 77, 148, 467, 1045, 1128, 1322, 1502
Tsp45I GTSAC 1 cut(s) 967
TspDTI ATGAA 5 cut(s) 371, 899, 1149, 1273, 1417
TspGWI ACGGA 2 cut(s) 115, 1649
TspRI CASTG 8 cut(s) 108, 178, 433, 486, 655, 972, 1095, 1312
Van91I CCANNNNNTGG 1 cut(s) 599
VneI GTGCAC 1 cut(s) 1257
VpaK11BI GGWCC 1 cut(s) 67
XceI RCATGY 2 cut(s) 319, 1257
XcmI CCANNNNNNNNNTGG 2 cut(s) 77, 163
XmiI GTMKAC 1 cut(s) 486
XmnI GAANNNNTTC 2 cut(s) 814, 942
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.