Rw2G034340

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000083
Physical Location & Seq
Reverse (-)
56397584 .. 56406705
9122 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G034340.1

Sequence Viewer

Length: 2790 bp
ATGCAATCATTGAAGCACCATTGGAGGCTGGTGGATTTAAGAAGAAAGGCAGACAAGTTAAGGATGGAAAGATCCGGTGGAGCTACTGCTCCAAAGAGGTCTAAGAATGCCATTCCTCAAGTCATCACGTCAAAAATGTCATACAAAAAAAGAAAAGCAGCTGAGGAAGCATCATCTCTTATGCTCCTTGTTCATGCCCAAGATCAATCAGCCTTCATCAGCATTGATTGCGGCTTACCTGTAAATTCTAGTTATACTGACTTGAATACAATCAAGTACATTTCAGATGCAAGATTCATAGACACTGGTGAGAGTAAGTCAATAAGGCCCAATCAAAGAAATAATTACACACAGCCATACTGGACTCTTAGGAGATTCCCAGAAGGAACCAGGAACTGCTACAAAATAAATGTCACAAGTGGAATGAAGTATTTGATTCGAGCAGGTTTCTATTATGGAAATTATGACGGCGATAATAAATTACCAGTATTCGAACTACATCTTGGAGCTAACTGGTGGGATACTGTGAGGTTTGAGGATGCATCAACTGACAAGAAAAAGGAGCTCATACATACCCCTTTGCGAAATTACATTCATGTTTGTTTGGTGAACATAGGCTCTGGCATCCCATTTATATCAGCTATAGAGCTAAGGCCTTTACCTAATGAGACTTATCAAACACAAACGGCCGCGGGTTCCTTAGAACTTGTTTCGCGGTATGACACTGGTCAAATGGGTACTCGTAGAGGATACAGGTTTCCATTTGATAGTTTTGATCGCATCTGGTCGAGTTCATATAACGTCGAGGATTCGGCACAATTAAGTACACCATTCACCGTTAACTCTAATTATCACAATAAATACCGTCCACCGTCTGATGTCATGCGTACTGCCGCCACGCCAAGAGATCCAAATGATCCTTTGAATATCCTGTTGCGGCCTTCTAATGATAGCAATGCAGAATATCATATTTACATGCACTTTGCAGAAGTTGAAAAGCTCCAACCCAACCAGTTTAGACGGTTCAACATCACTAGGAATGGAAACCCCTTTCATGGGTTAGTTACTCCAAGTTACTTGTACACAGCTACTATTTCTAGCTCTAAAGCTTTTGGCGGACAACAAAATAATTTTTCAATCTTCAAGGCTGAGAACTCTAGTCTTCCACCCATACTCAATGCTTTTGAGATTTATAAGGTGAAAGAATTCTCAGAATTGGATACAGACGAAGAAGATGTTGTTGCAATCACAAACATCAAGGAAACTTATAAAATTAGGAAAAACTGGCAAGGAGATCCATGTTCCCCTCAAGCTTACTCATGGGAGGGCATAAACTGTAGCTATCATGCTTACGAGCCCCTAAGACGAATTACAACCTTGAACTTGTCCTCGAATGGATTAACAGGGGAGATAGCTCTTTCTATATCCAATCTGGCAAAGATACAAACTCTGGATTTGTCAAACAACAACTTAACAGGTTCAATTCCTGAGTTTTTGTCTCAATTACCAGATCTGAATTTCATAAACTTGGAGAAAAACAAGCTTACAGGCTCAGTTCCAGTTGGATTAATTGAGAAGAGGAAGAATGGTTTGCTATCACTAAGTTTGTGCCAAAATCTAAATTTATCCGGAAACGTTCCTTGCAAGTTAAAGAAGAACCACAAATTCATTATTCTCGAAGTGGTGTCAATCTCTGGAATTTTCATCCTCTTGTCAATTGTAACAGCTATCTTCTGCTGGGGTCTTAAAAGGAAAAAACAACAGGGAGATGTCACAAATGTGAAAGCCACTATTCAATTGGGCTCAATGGAATCGACAAAACGAAAATTTACCTACTCTGAGATACTCAAGATTACCAACAACTTTGAAAGGATTCTTGGAAAAGGTGGATTCGGAACCGTTTATCATGGTTACCTAGACAAGACTCAAGTGGCTATCAAGATGCTTTCACCGTCAGCAGTTCAAGGATTTCAACAATTTCATGCAGAGGTTGATCTTCTTATGAGGGTTCATCACAAAAACTTGACAAATCTTGTTGGATATTGCAATGATAAAACTAGAGTAGGCCTGGTCTACGAGTATATGTGCAATGGAAACTTACAAGAACATCTTTCAGATAGTAGTTCAAATATCTTGACTTGGAAAGAACGACTTCGAATAGCAATAGATGCTGCACAAGGATTGGAATATCTGCACTATGGTTGCAAGCCACCCATAATCCACAGGGATATAAAATCAACAAATATCTTGCTGAATGAAAATCTTCAAGCTAAACTATCAGATTTTGGCCTATCCACGATTTTTCCAACTAATGATGGGACTCATGGGAGTCATGTATCAACTCTTGTTGCTGGCACTCCTGGGTACCTCGACCCCGAATACTACCTATCAAGTAGGTTAAATGAGAAGAGTGATGTTTATAGCTTTGGGATTGTGCTGCTAGAAATCATCACAAGTCGACCTGTTTTATCAAAACTACAAGAGAGAATTCACATTAGCCAATGGGTTGGTTTCATGCTTGAGAAAGGAGATATTTTCAGTATTGTTGATTCAAGGTTAAAGGAAAATTTCCATGCTAACTCAGTCTGGAAAGCTGTGGAAATAGCAATGGCATGTGTGTCTCCAAATGTCATCGACAGGCCAATCATGAGTGAAGTGATTGTGGAACTAAAGGAGTCTTTGGCAACAGAACTGGCTCTAACAAGGCAGAGCAATGAAACTGAATCAAGAATTTCCATTGAGATCATGTCTAACAATTCCATTGCTATGCTTACTCCCTCAGTTAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

929

Amino Acids

105.03

Weight (kDa)

8.93

Isoelectric Point (pI)

43.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 75 - 400 4.1e-110 Malectin-like domain
LRR_8 PF13855 455 - 515 7.9e-07 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 622 - 888 6.4e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 622 - 885 6.4e-41 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1194, 1269
Acc36I ACCTGC 1 cut(s) 434
Acc65I GGTACC 1 cut(s) 2364
AccB1I GGYRCC 1 cut(s) 2364
AccI GTMKAC 2 cut(s) 2073, 2458
AccII CGCG 2 cut(s) 692, 715
AccIII TCCGGA 1 cut(s) 1628
AciI CCGC 7 cut(s) 231, 690, 692, 715, 894, 937, 1116
AclI AACGTT 1 cut(s) 1635
AclWI GGATC 4 cut(s) 66, 902, 911, 1289
AcoI YGGCCR 1 cut(s) 687
AfaI GTAC 6 cut(s) 278, 739, 826, 889, 1082, 2366
AfiI CCNNNNNNNGG 3 cut(s) 1055, 1056, 2784
AjiI CACGTC 1 cut(s) 129
AjnI CCWGG 3 cut(s) 389, 2067, 2359
AjuI GAANNNNNNNTTGG 4 cut(s) 486, 518, 1860, 1892
AleI CACNNNNGTG 1 cut(s) 1778
Alw21I GWGCWC 1 cut(s) 567
Alw26I GTCTC 3 cut(s) 662, 1503, 2625
AlwI GGATC 4 cut(s) 66, 902, 911, 1289
AlwNI CAGNNNCTG 1 cut(s) 396
Aor13HI TCCGGA 1 cut(s) 1628
AoxI GGCC 7 cut(s) 326, 653, 687, 938, 2065, 2287, 2639
ApeKI GCWGC 3 cut(s) 158, 2171, 2437
ArsI GACNNNNNNTTYG 2 cut(s) 396, 428
AseI ATTAAT 1 cut(s) 1568
Asp700I GAANNNNTTC 4 cut(s) 1205, 1872, 2151, 2262
Asp718I GGTACC 1 cut(s) 2364
AspS9I GGNCC 1 cut(s) 327
AsuHPI GGTGA 5 cut(s) 320, 619, 826, 1210, 1941
AsuII TTCGAA 2 cut(s) 492, 2155
BanI GGYRCC 1 cut(s) 2364
BanII GRGCYC 3 cut(s) 567, 1359, 1805
BbsI GAAGAC 1 cut(s) 1154
Bbv12I GWGCWC 1 cut(s) 567
BbvCI CCTCAGC 1 cut(s) 162
BbvI GCAGC 3 cut(s) 170, 2158, 2424
BccI CCATC 2 cut(s) 58, 2309
BceAI ACGGC 2 cut(s) 484, 702
BciT130I CCWGG 3 cut(s) 391, 2069, 2361
BciVI GTATCC 3 cut(s) 514, 743, 1213
BcoDI GTCTC 3 cut(s) 662, 1503, 2625
BfaI CTAG 7 cut(s) 249, 1035, 1098, 1158, 1916, 2058, 2441
BfmI CTRYAG 2 cut(s) 642, 1336
BfuAI ACCTGC 1 cut(s) 434
BfuI GTATCC 3 cut(s) 514, 743, 1213
BglII AGATCT 1 cut(s) 1510
BisI GCNGC 7 cut(s) 159, 232, 690, 894, 938, 2172, 2438
BlsI GCNGC 7 cut(s) 160, 233, 691, 895, 939, 2173, 2439
Bme1390I CCNGG 3 cut(s) 391, 2069, 2361
BmgBI CACGTC 1 cut(s) 129
BmgT120I GGNCC 1 cut(s) 327
BmiI GGNNCC 4 cut(s) 388, 697, 1897, 2366
BmrFI CCNGG 3 cut(s) 391, 2069, 2361
BmsI GCATC 8 cut(s) 179, 277, 529, 551, 633, 789, 1932, 2158
BoxI GACNNNNGTC 1 cut(s) 726
BpiI GAAGAC 1 cut(s) 1154
Bpu10I CCTNAGC 2 cut(s) 162, 650
Bpu14I TTCGAA 2 cut(s) 492, 2155
BpuEI CTTGAG 5 cut(s) 102, 1293, 1832, 1911, 2540
BsaJI CCNNGG 2 cut(s) 690, 2360
BsaWI WCCGGW 2 cut(s) 74, 1628
Bsc4I CCNNNNNNNGG 3 cut(s) 1055, 1056, 2784
Bse1I ACTGG 9 cut(s) 310, 365, 485, 518, 730, 1012, 1289, 1559, 2697
Bse3DI GCAATG 6 cut(s) 961, 2053, 2095, 2613, 2719, 2760
BseAI TCCGGA 1 cut(s) 1628
BseBI CCWGG 3 cut(s) 391, 2069, 2361
BseDI CCNNGG 2 cut(s) 690, 2360
BseGI GGATG 4 cut(s) 69, 544, 624, 1704
BseLI CCNNNNNNNGG 3 cut(s) 1055, 1056, 2784
BseMI GCAATG 6 cut(s) 961, 2053, 2095, 2613, 2719, 2760
BseMII CTCAG 7 cut(s) 153, 1140, 1224, 1479, 1566, 1830, 2595
BseNI ACTGG 9 cut(s) 310, 365, 485, 518, 730, 1012, 1289, 1559, 2697
BseX3I CGGCCG 1 cut(s) 687
BseXI GCAGC 3 cut(s) 170, 2158, 2424
BseYI CCCAGC 1 cut(s) 1737
BsgI GTGCAG 2 cut(s) 2157, 2177
Bsh1236I CGCG 2 cut(s) 692, 715
Bsh1285I CGRYCG 1 cut(s) 690
BshFI GGCC 7 cut(s) 328, 655, 689, 940, 2067, 2289, 2641
BshNI GGYRCC 1 cut(s) 2364
BsiEI CGRYCG 1 cut(s) 690
BsiHKAI GWGCWC 1 cut(s) 567
BsiSI CCGG 2 cut(s) 75, 1629
BslFI GGGAC 1 cut(s) 2332
BslI CCNNNNNNNGG 3 cut(s) 1055, 1056, 2784
BsmAI GTCTC 3 cut(s) 662, 1503, 2625
BsmFI GGGAC 1 cut(s) 2332
BsmI GAATGC 1 cut(s) 112
BsnI GGCC 7 cut(s) 328, 655, 689, 940, 2067, 2289, 2641
Bsp119I TTCGAA 2 cut(s) 492, 2155
Bsp1286I GDGCHC 3 cut(s) 567, 1359, 1805
Bsp13I TCCGGA 1 cut(s) 1628
Bsp1407I TGTACA 1 cut(s) 1080
Bsp143I GATC 9 cut(s) 71, 202, 775, 907, 916, 1294, 1510, 1993, 2742
BspACI CCGC 7 cut(s) 231, 690, 692, 715, 894, 937, 1116
BspANI GGCC 7 cut(s) 328, 655, 689, 940, 2067, 2289, 2641
BspCNI CTCAG 7 cut(s) 154, 1141, 1223, 1480, 1565, 1831, 2594
BspEI TCCGGA 1 cut(s) 1628
BspFNI CGCG 2 cut(s) 692, 715
BspHI TCATGA 1 cut(s) 2646
BspLI GGNNCC 4 cut(s) 388, 697, 1897, 2366
BspMI ACCTGC 1 cut(s) 434
BspPI GGATC 4 cut(s) 66, 902, 911, 1289
BspT104I TTCGAA 2 cut(s) 492, 2155
BspT107I GGYRCC 1 cut(s) 2364
BsrDI GCAATG 6 cut(s) 961, 2053, 2095, 2613, 2719, 2760
BsrGI TGTACA 1 cut(s) 1080
BsrI ACTGG 9 cut(s) 310, 365, 485, 518, 730, 1012, 1289, 1559, 2697
BssECI CCNNGG 2 cut(s) 690, 2360
BssMI GATC 9 cut(s) 71, 202, 775, 907, 916, 1294, 1510, 1993, 2742
Bst2UI CCWGG 3 cut(s) 391, 2069, 2361
Bst4CI ACNGT 8 cut(s) 526, 838, 866, 873, 1023, 1337, 1900, 1953
Bst6I CTCTTC 2 cut(s) 1571, 2402
BstAPI GCANNNNNTGC 2 cut(s) 228, 2168
BstAUI TGTACA 1 cut(s) 1080
BstBI TTCGAA 2 cut(s) 492, 2155
BstC8I GCNNGC 2 cut(s) 2207, 2353
BstDSI CCRYGG 1 cut(s) 690
BstEII GGTNACC 1 cut(s) 1910
BstENI CCTNNNNNAGG 1 cut(s) 2782
BstF5I GGATG 4 cut(s) 69, 544, 624, 1704
BstFNI CGCG 2 cut(s) 692, 715
BstKTI GATC 9 cut(s) 74, 205, 778, 910, 919, 1297, 1513, 1996, 2745
BstMAI GTCTC 3 cut(s) 662, 1503, 2625
BstMBI GATC 9 cut(s) 71, 202, 775, 907, 916, 1294, 1510, 1993, 2742
BstMCI CGRYCG 1 cut(s) 690
BstMWI GCNNNNNNNGC 3 cut(s) 167, 228, 2168
BstNI CCWGG 3 cut(s) 391, 2069, 2361
BstNSI RCATGY 2 cut(s) 979, 2616
BstPAI GACNNNNGTC 1 cut(s) 726
BstPI GGTNACC 1 cut(s) 1910
BstSCI CCNGG 3 cut(s) 389, 2067, 2359
BstSFI CTRYAG 2 cut(s) 642, 1336
BstUI CGCG 2 cut(s) 692, 715
BstV1I GCAGC 3 cut(s) 170, 2158, 2424
BstV2I GAAGAC 1 cut(s) 1154
BstX2I RGATCY 4 cut(s) 71, 907, 1294, 1510
BstXI CCANNNNNNTGG 1 cut(s) 2507
BstYI RGATCY 4 cut(s) 71, 907, 1294, 1510
BstZI CGGCCG 1 cut(s) 687
BsuI GTATCC 3 cut(s) 514, 743, 1213
BsuRI GGCC 7 cut(s) 328, 655, 689, 940, 2067, 2289, 2641
BtgI CCRYGG 1 cut(s) 690
BtrI CACGTC 1 cut(s) 129
BtsCI GGATG 4 cut(s) 69, 544, 624, 1704
BtsIMutI CAGTG 2 cut(s) 303, 723
BveI ACCTGC 1 cut(s) 434
Cac8I GCNNGC 2 cut(s) 2207, 2353
CaiI CAGNNNCTG 1 cut(s) 396
CciI TCATGA 1 cut(s) 2646
Cfr13I GGNCC 1 cut(s) 327
Cfr42I CCGCGG 1 cut(s) 693
Csp6I GTAC 6 cut(s) 277, 738, 825, 888, 1081, 2365
CviQI GTAC 6 cut(s) 277, 738, 825, 888, 1081, 2365
DpnI GATC 9 cut(s) 73, 204, 777, 909, 918, 1296, 1512, 1995, 2744
DpnII GATC 9 cut(s) 71, 202, 775, 907, 916, 1294, 1510, 1993, 2742
EaeI YGGCCR 1 cut(s) 687
EagI CGGCCG 1 cut(s) 687
Eam1104I CTCTTC 2 cut(s) 1571, 2402
EarI CTCTTC 2 cut(s) 1571, 2402
EciI GGCGGA 1 cut(s) 1131
Ecl136II GAGCTC 1 cut(s) 565
EclXI CGGCCG 1 cut(s) 687
Eco147I AGGCCT 2 cut(s) 655, 2067
Eco24I GRGCYC 3 cut(s) 567, 1359, 1805
Eco52I CGGCCG 1 cut(s) 687
Eco53kI GAGCTC 1 cut(s) 565
Eco91I GGTNACC 1 cut(s) 1910
EcoICRI GAGCTC 1 cut(s) 565
EcoNI CCTNNNNNAGG 1 cut(s) 2782
EcoO65I GGTNACC 1 cut(s) 1910
EcoRI GAATTC 2 cut(s) 1205, 2487
EcoRII CCWGG 3 cut(s) 389, 2067, 2359
EcoT22I ATGCAT 1 cut(s) 544
EcoT38I GRGCYC 3 cut(s) 567, 1359, 1805
FalI AAGNNNNNCTT 4 cut(s) 2094, 2126, 2136, 2168
FaqI GGGAC 1 cut(s) 2332
FauI CCCGC 1 cut(s) 685
FblI GTMKAC 2 cut(s) 2073, 2458
Fnu4HI GCNGC 7 cut(s) 159, 232, 690, 894, 938, 2172, 2438
FokI GGATG 4 cut(s) 76, 551, 611, 1691
FriOI GRGCYC 3 cut(s) 567, 1359, 1805
Fsp4HI GCNGC 7 cut(s) 159, 232, 690, 894, 938, 2172, 2438
FspBI CTAG 7 cut(s) 249, 1035, 1098, 1158, 1916, 2058, 2441
GluI GCNGC 7 cut(s) 159, 232, 690, 894, 938, 2172, 2438
GsaI CCCAGC 1 cut(s) 1741
HaeIII GGCC 7 cut(s) 328, 655, 689, 940, 2067, 2289, 2641
HapII CCGG 2 cut(s) 75, 1629
HincII GTYRAC 2 cut(s) 841, 2459
HindII GTYRAC 2 cut(s) 841, 2459
HindIII AAGCTT 3 cut(s) 1107, 1311, 1541
HpaI GTTAAC 1 cut(s) 841
HpaII CCGG 2 cut(s) 75, 1629
HphI GGTGA 5 cut(s) 320, 619, 826, 1210, 1941
Hpy166II GTNNAC 7 cut(s) 610, 827, 841, 869, 1083, 2074, 2459
Hpy188I TCNGA 8 cut(s) 286, 877, 1213, 1515, 1840, 1895, 2116, 2281
Hpy8I GTNNAC 7 cut(s) 610, 827, 841, 869, 1083, 2074, 2459
Hpy99I CGWCG 1 cut(s) 806
HpyAV CCTTC 3 cut(s) 223, 377, 951
HpyCH4III ACNGT 8 cut(s) 526, 838, 866, 873, 1023, 1337, 1900, 1953
HpyCH4IV ACGT 3 cut(s) 128, 801, 1635
HpyF10VI GCNNNNNNNGC 3 cut(s) 167, 228, 2168
HpySE526I ACGT 3 cut(s) 128, 801, 1635
Kpn2I TCCGGA 1 cut(s) 1628
KpnI GGTACC 1 cut(s) 2368
KspAI GTTAAC 1 cut(s) 841
KspI CCGCGG 1 cut(s) 693
Kzo9I GATC 9 cut(s) 71, 202, 775, 907, 916, 1294, 1510, 1993, 2742
LmnI GCTCC 6 cut(s) 80, 94, 189, 506, 562, 1005
Lsp1109I GCAGC 3 cut(s) 170, 2158, 2424
LweI GCATC 8 cut(s) 179, 277, 529, 551, 633, 789, 1932, 2158
MaeI CTAG 7 cut(s) 249, 1035, 1098, 1158, 1916, 2058, 2441
MaeII ACGT 3 cut(s) 128, 801, 1635
MaeIII GTNAC 6 cut(s) 412, 1063, 1073, 1720, 1771, 1910
MalI GATC 9 cut(s) 73, 204, 777, 909, 918, 1296, 1512, 1995, 2744
MboI GATC 9 cut(s) 71, 202, 775, 907, 916, 1294, 1510, 1993, 2742
MfeI CAATTG 2 cut(s) 1716, 1796
MflI RGATCY 4 cut(s) 71, 907, 1294, 1510
MhlI GDGCHC 3 cut(s) 567, 1359, 1805
MlyI GAGTC 5 cut(s) 358, 1918, 2314, 2338, 2684
MmeI TCCRAC 4 cut(s) 1027, 1543, 2017, 2330
Mph1103I ATGCAT 1 cut(s) 544
MroI TCCGGA 1 cut(s) 1628
MroXI GAANNNNTTC 4 cut(s) 1205, 1872, 2151, 2262
MslI CAYNNNNRTG 2 cut(s) 1778, 2765
MspA1I CMGCKG 2 cut(s) 161, 692
MspI CCGG 2 cut(s) 75, 1629
MspR9I CCNGG 3 cut(s) 391, 2069, 2361
MunI CAATTG 2 cut(s) 1716, 1796
Mva1269I GAATGC 1 cut(s) 112
MvaI CCWGG 3 cut(s) 391, 2069, 2361
MvnI CGCG 2 cut(s) 692, 715
MwoI GCNNNNNNNGC 3 cut(s) 167, 228, 2168
NdeII GATC 9 cut(s) 71, 202, 775, 907, 916, 1294, 1510, 1993, 2742
NlaIV GGNNCC 4 cut(s) 388, 697, 1897, 2366
NmuCI GTSAC 2 cut(s) 412, 1771
NsiI ATGCAT 1 cut(s) 544
NspI RCATGY 2 cut(s) 979, 2616
NspV TTCGAA 2 cut(s) 492, 2155
OliI CACNNNNGTG 1 cut(s) 1778
PagI TCATGA 1 cut(s) 2646
PceI AGGCCT 2 cut(s) 655, 2067
PctI GAATGC 1 cut(s) 112
PdmI GAANNNNTTC 4 cut(s) 1205, 1872, 2151, 2262
PfeI GAWTC 9 cut(s) 294, 375, 436, 809, 1811, 1873, 1890, 2549, 2723
PkrI GCNGC 7 cut(s) 160, 233, 691, 895, 939, 2173, 2439
PleI GAGTC 5 cut(s) 358, 1918, 2314, 2337, 2683
PpsI GAGTC 5 cut(s) 358, 1918, 2314, 2337, 2683
PshAI GACNNNNGTC 1 cut(s) 726
PshBI ATTAAT 1 cut(s) 1568
PsiI TTATAA 2 cut(s) 1194, 1269
Psp124BI GAGCTC 1 cut(s) 567
Psp1406I AACGTT 1 cut(s) 1635
Psp6I CCWGG 3 cut(s) 389, 2067, 2359
PspEI GGTNACC 1 cut(s) 1910
PspFI CCCAGC 1 cut(s) 1737
PspGI CCWGG 3 cut(s) 389, 2067, 2359
PspN4I GGNNCC 4 cut(s) 388, 697, 1897, 2366
PspPI GGNCC 1 cut(s) 327
PstNI CAGNNNCTG 1 cut(s) 396
PsuI RGATCY 4 cut(s) 71, 907, 1294, 1510
PvuII CAGCTG 1 cut(s) 161
RsaI GTAC 6 cut(s) 278, 739, 826, 889, 1082, 2366
RsaNI GTAC 6 cut(s) 277, 738, 825, 888, 1081, 2365
RseI CAYNNNNRTG 2 cut(s) 1778, 2765
SacI GAGCTC 1 cut(s) 567
SacII CCGCGG 1 cut(s) 693
SalI GTCGAC 1 cut(s) 2457
SatI GCNGC 7 cut(s) 159, 232, 690, 894, 938, 2172, 2438
Sau3AI GATC 9 cut(s) 71, 202, 775, 907, 916, 1294, 1510, 1993, 2742
Sau96I GGNCC 1 cut(s) 327
SchI GAGTC 5 cut(s) 358, 1918, 2314, 2338, 2684
ScrFI CCNGG 3 cut(s) 391, 2069, 2361
SduI GDGCHC 3 cut(s) 567, 1359, 1805
SfaNI GCATC 8 cut(s) 179, 277, 529, 551, 633, 789, 1932, 2158
SfcI CTRYAG 2 cut(s) 642, 1336
Sfr303I CCGCGG 1 cut(s) 693
SfuI TTCGAA 2 cut(s) 492, 2155
SgrBI CCGCGG 1 cut(s) 693
SmiMI CAYNNNNRTG 2 cut(s) 1778, 2765
SmlI CTYRAG 5 cut(s) 117, 1308, 1847, 1926, 2519
SmoI CTYRAG 5 cut(s) 117, 1308, 1847, 1926, 2519
SseBI AGGCCT 2 cut(s) 655, 2067
SsiI CCGC 7 cut(s) 231, 690, 692, 715, 894, 937, 1116
SspMI CTAG 7 cut(s) 249, 1035, 1098, 1158, 1916, 2058, 2441
SstI GAGCTC 1 cut(s) 567
StuI AGGCCT 2 cut(s) 655, 2067
StyD4I CCNGG 3 cut(s) 389, 2067, 2359
TaaI ACNGT 8 cut(s) 526, 838, 866, 873, 1023, 1337, 1900, 1953
TaiI ACGT 3 cut(s) 131, 804, 1638
TatI WGTACW 3 cut(s) 276, 824, 1080
TauI GCSGC 4 cut(s) 234, 692, 896, 940
TfiI GAWTC 9 cut(s) 294, 375, 436, 809, 1811, 1873, 1890, 2549, 2723
TscAI CASTG 2 cut(s) 310, 730
TseFI GTSAC 2 cut(s) 412, 1771
TseI GCWGC 3 cut(s) 158, 2171, 2437
Tsp45I GTSAC 2 cut(s) 412, 1771
TspRI CASTG 2 cut(s) 310, 730
VspI ATTAAT 1 cut(s) 1568
XagI CCTNNNNNAGG 1 cut(s) 2782
XceI RCATGY 2 cut(s) 979, 2616
XcmI CCANNNNNNNNNTGG 1 cut(s) 1795
XmiI GTMKAC 2 cut(s) 2073, 2458
XmnI GAANNNNTTC 4 cut(s) 1205, 1872, 2151, 2262
XspI CTAG 7 cut(s) 249, 1035, 1098, 1158, 1916, 2058, 2441
Zsp2I ATGCAT 1 cut(s) 544
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.