Rmu_sc0007208.1_g000008

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007208.1
OG0000083
Physical Location & Seq
Reverse (-)
40871 .. 46028
5158 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007208.1_g000008.1.cds

Sequence Viewer

Length: 2682 bp
atgatgtcgcttccactgaagcacatcctctttgcgctgcttggttgtttttctcttatactcctagtccatgcccaggatgatcaatcaggcttcattagcatagattgcgggcgaactcaaaattccagctacactgaaaagacaacaggcatcaactacatttctgacacaggcttcatagacaccggtgaaagtaagctcgttttgggttctgtaaaagatatttatcaacagccatactggggtgtcaggagctttcctgaaggaatcaggaactgctacaagatcaatgttacaagtggggacaaatatttgatcagagcaagtttcgtgtatgggaactatgatggcaaagatgaactaccaacattcctccttcatcttggaacaaatttgtgggattcagtgaaggtggagaatgtatcctatctcataaacaaggagatcatccatgtccctctccgaaattatatacatgtttgtctggtgaacaatggctccggggttccgtttatatcagcattagaattaaggcctttgaacattacatcctatccaacacaaattgggtccttggcacttaactggcggcttgacattggacaaatagcacctgatctaaaattttataggtatccaaaggatatttatgatcgcttttgggatccctatgaggatgttgacaatgagtggttaacattgaatacttcatccacagtcgactttgacaaacacaacagataccaaccagcatcaattgtcatgagcacagctgccacatcacgaaatgcgaatgtttccttgaatttatggtgggattctcctattgatgcaaacgatacagaatattatgtttacatgcactttgcagaaattgaaaagctccaatcaaatgagtccagaatgcagtacattactaaccatggagagctcttccaggagtcatttgctgctagttacttgtataccacaacaatttacagcactaaaggtttgagaggagggcagaacttttcaatcatcaaggatgacaactctacccttccacccagtatcaatggacttgaggtctacacactgaaagaattcctagaattagaaacaaaccaagaggatgttgaagcaatcacatacgtcaagtcagcttatgaaattacaaagaattggcagggagatccatgtctcccactaaactacttgtgggaaggcctaatatgtagctatcctgaaaacgactccccaagaatcatttccttggacttgtcatcgagtggattaacaggagagatttctcgttcaatgtccaatctcgcaatgatacaaatattggatttatcaaacaacaatttgacaggaccaattccggactttttgtctcaattgccagatttaaatgtcctgaacctggagaaaaacaagttcacaggctcacttccactaggactcgttgatagaaggaagaatggcctcctatcaataagtttgtgtgacaacccaaatctagctggaaatgaattttgcacaacaaagaagaagaagaagaacaagaacaaaagcgttattccaataattggagctattgccggaatttcaaccctcattatagctggagcagttttcttttgtttctgtaaaaggaaaagacaacatgtagctgcaatcaattcaaaacccaaccctggatcagtggaactcgagcaaaaaaaccgaaagtttacatactctgagatcctcaagatcacaaacaaccgacaaagggttcttggcaaaggtggatttggaactgtttatcatggctacatagatgacaaaactcaagtagctgtcaagctgctttcaccatcatcaagtcaaggacttcaacaatttcatgcagaggttcatcttcttatgagagttcatcatacaaacttgactagcctcgttggatattgtgatgacgaaaccaacaaagggcttgtttacgagtacatggccaatggaaacttgcaagcatttctctcagataaaagttcggatgtattgacttgggaaggaagacttcaaatagcaacagaagctgcacaaggattggagtatctacactatggttgcaaaccacctatgatccatagagatgtaaaatcaacaaacatcttactcaatgaaaagttccaagctaaactctctgattttggcctgtcaagaaactttgctccaggtgatgggactcatatcgttacaggtgttgctgggactcctggctacctggcccctgagtaccatcaatcaaacaggctgaatgagaagagtgatgtttatagctttgggattgtactgcttgagattatcactggtcaacctgtttattctagaacaaatggtgagagaactcacattagtagatgggttgaactcatgcttccgcaaggagacatttacagtatcattgatccaatgttagagagaaacgtcaatgtcaactctgcctggaaagctgttgagatagcaatggcatgtgtatctgcagaggccagcaagaggccagtcatgagcaatgttgtgatggaactaaaagagtgtttggcagcacaactcaatctgacaaacctcagcagctatgaaactgaactaggaagttccattgatgtggtgtctcaagataactccatcactatgatgcgtccctcagtaaggtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

893

Amino Acids

100.11

Weight (kDa)

5.76

Isoelectric Point (pI)

37.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 1574, 2207
AccI GTMKAC 3 cut(s) 723, 968, 1074
AccIII TCCGGA 1 cut(s) 1366
AciI CCGC 3 cut(s) 111, 592, 2408
AclWI GGATC 7 cut(s) 662, 675, 1172, 1693, 1726, 2104, 2429
AcoI YGGCCR 1 cut(s) 1977
AcsI RAATTY 7 cut(s) 124, 394, 626, 808, 1088, 1517, 1590
AcuI CTGAAG 2 cut(s) 38, 285
AfaI GTAC 4 cut(s) 914, 1973, 2264, 2319
AflIII ACRYGT 2 cut(s) 478, 1651
AgeI ACCGGT 1 cut(s) 188
AhdI GACNNNNNGTC 2 cut(s) 1070, 1375
AjnI CCWGG 8 cut(s) 75, 939, 1407, 1681, 2200, 2242, 2250, 2471
AjuI GAANNNNNNNTTGG 2 cut(s) 1237, 1269
AloI GAACNNNNNNTCC 4 cut(s) 485, 517, 536, 568
Alw21I GWGCWC 2 cut(s) 773, 936
Alw26I GTCTC 4 cut(s) 1190, 1383, 2409, 2643
AlwI GGATC 7 cut(s) 662, 675, 1172, 1693, 1726, 2104, 2429
AlwNI CAGNNNCTG 2 cut(s) 279, 2063
Ama87I CYCGRG 1 cut(s) 1697
Aor13HI TCCGGA 1 cut(s) 1366
AoxI GGCC 8 cut(s) 536, 1210, 1468, 1977, 2179, 2253, 2514, 2525
ApeKI GCWGC 8 cut(s) 37, 776, 953, 1658, 1834, 2063, 2570, 2598
ApoI RAATTY 7 cut(s) 124, 394, 626, 808, 1088, 1517, 1590
AsiGI ACCGGT 1 cut(s) 188
Asp700I GAANNNNTTC 2 cut(s) 1088, 1252
AspLEI GCGC 1 cut(s) 37
AspS9I GGNCC 3 cut(s) 573, 1358, 2254
AsuC2I CCSGG 1 cut(s) 505
AsuHPI GGTGA 5 cut(s) 203, 502, 1833, 2216, 2378
AvaI CYCGRG 1 cut(s) 1697
AvaII GGWCC 2 cut(s) 573, 1358
BalI TGGCCA 1 cut(s) 1979
BamHI GGATCC 1 cut(s) 667
BanII GRGCYC 1 cut(s) 936
BbsI GAAGAC 1 cut(s) 2047
Bbv12I GWGCWC 2 cut(s) 773, 936
BbvCI CCTCAGC 1 cut(s) 2594
BbvI GCAGC 8 cut(s) 24, 763, 940, 1645, 1821, 2050, 2582, 2610
BccI CCATC 7 cut(s) 344, 1852, 2201, 2274, 2382, 2542, 2660
BciT130I CCWGG 8 cut(s) 77, 941, 1409, 1683, 2202, 2244, 2252, 2473
BciVI GTATCC 2 cut(s) 436, 648
BclI TGATCA 2 cut(s) 82, 318
BcnI CCSGG 1 cut(s) 505
BcoDI GTCTC 4 cut(s) 1190, 1383, 2409, 2643
BfaI CTAG 8 cut(s) 65, 957, 1094, 1442, 1505, 1920, 2355, 2615
BfmI CTRYAG 1 cut(s) 2508
BfuI GTATCC 2 cut(s) 436, 648
BisI GCNGC 9 cut(s) 38, 593, 777, 954, 1659, 1835, 2064, 2571, 2599
BlsI GCNGC 9 cut(s) 39, 594, 778, 955, 1660, 1836, 2065, 2572, 2600
Bme1390I CCNGG 9 cut(s) 77, 505, 941, 1409, 1683, 2202, 2244, 2252, 2473
Bme18I GGWCC 2 cut(s) 573, 1358
BmeRI GACNNNNNGTC 2 cut(s) 1070, 1375
BmeT110I CYCGRG 1 cut(s) 1697
BmgT120I GGNCC 3 cut(s) 573, 1358, 2254
BmiI GGNNCC 5 cut(s) 502, 510, 574, 669, 2256
BmrFI CCNGG 9 cut(s) 77, 505, 941, 1409, 1683, 2202, 2244, 2252, 2473
BmrI ACTGGG 2 cut(s) 253, 1047
BmsI GCATC 4 cut(s) 162, 764, 823, 2652
BmuI ACTGGG 2 cut(s) 253, 1047
BpiI GAAGAC 1 cut(s) 2047
BpmI CTGGAG 3 cut(s) 1430, 1632, 2184
Bpu10I CCTNAGC 1 cut(s) 2594
BpuEI CTTGAG 5 cut(s) 1088, 1721, 1803, 2345, 2625
BpuMI CCSGG 1 cut(s) 505
BsaBI GATNNNNATC 1 cut(s) 228
BsaJI CCNNGG 6 cut(s) 75, 504, 576, 925, 1257, 1681
BsaWI WCCGGW 2 cut(s) 188, 1366
BsaXI ACNNNNNCTCC 2 cut(s) 485, 515
Bse118I RCCGGY 1 cut(s) 188
Bse1I ACTGG 5 cut(s) 248, 593, 1053, 2341, 2528
Bse3DI GCAATG 3 cut(s) 1323, 2499, 2545
Bse8I GATNNNNATC 1 cut(s) 228
BseAI TCCGGA 1 cut(s) 1366
BseBI CCWGG 8 cut(s) 77, 941, 1409, 1683, 2202, 2244, 2252, 2473
BseDI CCNNGG 6 cut(s) 75, 504, 576, 925, 1257, 1681
BseGI GGATG 9 cut(s) 24, 85, 450, 551, 685, 713, 1036, 1123, 2026
BseJI GATNNNNATC 1 cut(s) 228
BseMI GCAATG 3 cut(s) 1323, 2499, 2545
BseMII CTCAG 4 cut(s) 1719, 2019, 2250, 2608
BseNI ACTGG 5 cut(s) 248, 593, 1053, 2341, 2528
BseRI GAGGAG 1 cut(s) 1017
BseXI GCAGC 8 cut(s) 24, 763, 940, 1645, 1821, 2050, 2582, 2610
BseYI CCCAGC 1 cut(s) 2234
BsgI GTGCAG 1 cut(s) 2049
BshFI GGCC 8 cut(s) 538, 1212, 1470, 1979, 2181, 2255, 2516, 2527
BshTI ACCGGT 1 cut(s) 188
BsiHKAI GWGCWC 2 cut(s) 773, 936
BsiHKCI CYCGRG 1 cut(s) 1697
BsiSI CCGG 4 cut(s) 189, 504, 1367, 1587
BslFI GGGAC 5 cut(s) 320, 443, 2224, 2251, 2652
BsmAI GTCTC 4 cut(s) 1190, 1383, 2409, 2643
BsmFI GGGAC 5 cut(s) 320, 443, 2224, 2251, 2652
BsmI GAATGC 1 cut(s) 912
BsnI GGCC 8 cut(s) 538, 1212, 1470, 1979, 2181, 2255, 2516, 2527
BsoBI CYCGRG 1 cut(s) 1697
Bsp1286I GDGCHC 2 cut(s) 773, 936
Bsp13I TCCGGA 1 cut(s) 1366
Bsp19I CCATGG 1 cut(s) 925
BspACI CCGC 3 cut(s) 111, 592, 2408
BspANI GGCC 8 cut(s) 538, 1212, 1470, 1979, 2181, 2255, 2516, 2527
BspCNI CTCAG 4 cut(s) 1720, 2018, 2251, 2607
BspEI TCCGGA 1 cut(s) 1366
BspHI TCATGA 2 cut(s) 765, 2532
BspLI GGNNCC 5 cut(s) 502, 510, 574, 669, 2256
BspMAI CTGCAG 1 cut(s) 2512
BspPI GGATC 7 cut(s) 662, 675, 1172, 1693, 1726, 2104, 2429
BspQI GCTCTTC 1 cut(s) 941
BsrDI GCAATG 3 cut(s) 1323, 2499, 2545
BsrFI RCCGGY 1 cut(s) 188
BsrI ACTGG 5 cut(s) 248, 593, 1053, 2341, 2528
BssAI RCCGGY 1 cut(s) 188
BssECI CCNNGG 6 cut(s) 75, 504, 576, 925, 1257, 1681
BssNAI GTATAC 1 cut(s) 969
BssT1I CCWWGG 3 cut(s) 576, 925, 1257
Bst1107I GTATAC 1 cut(s) 969
Bst2UI CCWGG 8 cut(s) 77, 941, 1409, 1683, 2202, 2244, 2252, 2473
Bst4CI ACNGT 3 cut(s) 721, 1789, 2426
Bst6I CTCTTC 2 cut(s) 941, 2285
BstAPI GCANNNNNTGC 1 cut(s) 108
BstC8I GCNNGC 3 cut(s) 113, 1995, 2518
BstDEI CTNAG 5 cut(s) 1728, 2005, 2259, 2594, 2671
BstDSI CCRYGG 1 cut(s) 925
BstENI CCTNNNNNAGG 1 cut(s) 2674
BstF5I GGATG 9 cut(s) 24, 85, 450, 551, 685, 713, 1036, 1123, 2026
BstHHI GCGC 1 cut(s) 37
BstMAI GTCTC 4 cut(s) 1190, 1383, 2409, 2643
BstMWI GCNNNNNNNGC 4 cut(s) 99, 108, 2060, 2477
BstNI CCWGG 8 cut(s) 77, 941, 1409, 1683, 2202, 2244, 2252, 2473
BstNSI RCATGY 4 cut(s) 482, 865, 1655, 2502
BstSCI CCNGG 9 cut(s) 75, 503, 939, 1407, 1681, 2200, 2242, 2250, 2471
BstSFI CTRYAG 1 cut(s) 2508
BstV1I GCAGC 8 cut(s) 24, 763, 940, 1645, 1821, 2050, 2582, 2610
BstV2I GAAGAC 1 cut(s) 2047
BstX2I RGATCY 3 cut(s) 667, 1177, 1731
BstXI CCANNNNNNTGG 1 cut(s) 2632
BstYI RGATCY 3 cut(s) 667, 1177, 1731
BstZ17I GTATAC 1 cut(s) 969
BsuI GTATCC 2 cut(s) 436, 648
BsuRI GGCC 8 cut(s) 538, 1212, 1470, 1979, 2181, 2255, 2516, 2527
BtgI CCRYGG 1 cut(s) 925
BtsCI GGATG 9 cut(s) 24, 85, 450, 551, 685, 713, 1036, 1123, 2026
BtsIMutI CAGTG 6 cut(s) 14, 135, 414, 1079, 1695, 2334
Cac8I GCNNGC 3 cut(s) 113, 1995, 2518
CaiI CAGNNNCTG 2 cut(s) 279, 2063
CciI TCATGA 2 cut(s) 765, 2532
CfoI GCGC 1 cut(s) 37
Cfr10I RCCGGY 1 cut(s) 188
Cfr13I GGNCC 3 cut(s) 573, 1358, 2254
CseI GACGC 1 cut(s) 2654
Csp6I GTAC 4 cut(s) 913, 1972, 2263, 2318
CspAI ACCGGT 1 cut(s) 188
CviQI GTAC 4 cut(s) 913, 1972, 2263, 2318
DdeI CTNAG 5 cut(s) 1728, 2005, 2259, 2594, 2671
DraI TTTAAA 1 cut(s) 1395
DriI GACNNNNNGTC 2 cut(s) 1070, 1375
EaeI YGGCCR 1 cut(s) 1977
Eam1104I CTCTTC 2 cut(s) 941, 2285
Eam1105I GACNNNNNGTC 2 cut(s) 1070, 1375
EarI CTCTTC 2 cut(s) 941, 2285
Ecl136II GAGCTC 1 cut(s) 934
Eco130I CCWWGG 3 cut(s) 576, 925, 1257
Eco147I AGGCCT 2 cut(s) 538, 1212
Eco24I GRGCYC 1 cut(s) 936
Eco47I GGWCC 2 cut(s) 573, 1358
Eco53kI GAGCTC 1 cut(s) 934
Eco57I CTGAAG 2 cut(s) 38, 285
Eco88I CYCGRG 1 cut(s) 1697
EcoICRI GAGCTC 1 cut(s) 934
EcoNI CCTNNNNNAGG 1 cut(s) 2674
EcoO109I RGGNCCY 1 cut(s) 573
EcoRI GAATTC 1 cut(s) 1088
EcoRII CCWGG 8 cut(s) 75, 939, 1407, 1681, 2200, 2242, 2250, 2471
EcoT14I CCWWGG 3 cut(s) 576, 925, 1257
EcoT38I GRGCYC 1 cut(s) 936
ErhI CCWWGG 3 cut(s) 576, 925, 1257
FalI AAGNNNNNCTT 2 cut(s) 2028, 2060
FaqI GGGAC 5 cut(s) 320, 443, 2224, 2251, 2652
FauI CCCGC 1 cut(s) 104
FbaI TGATCA 2 cut(s) 82, 318
FblI GTMKAC 3 cut(s) 723, 968, 1074
Fnu4HI GCNGC 9 cut(s) 38, 593, 777, 954, 1659, 1835, 2064, 2571, 2599
FokI GGATG 9 cut(s) 11, 92, 437, 538, 692, 700, 1043, 1130, 2033
FriOI GRGCYC 1 cut(s) 936
Fsp4HI GCNGC 9 cut(s) 38, 593, 777, 954, 1659, 1835, 2064, 2571, 2599
FspBI CTAG 8 cut(s) 65, 957, 1094, 1442, 1505, 1920, 2355, 2615
GlaI GCGC 1 cut(s) 36
GluI GCNGC 9 cut(s) 38, 593, 777, 954, 1659, 1835, 2064, 2571, 2599
GsaI CCCAGC 1 cut(s) 2238
GsuI CTGGAG 3 cut(s) 1430, 1632, 2184
HaeIII GGCC 8 cut(s) 538, 1212, 1470, 1979, 2181, 2255, 2516, 2527
HapII CCGG 4 cut(s) 189, 504, 1367, 1587
HgaI GACGC 1 cut(s) 2654
HhaI GCGC 1 cut(s) 37
Hin6I GCGC 1 cut(s) 35
HinP1I GCGC 1 cut(s) 35
HincII GTYRAC 5 cut(s) 685, 699, 724, 2342, 2464
HindII GTYRAC 5 cut(s) 685, 699, 724, 2342, 2464
HpaI GTTAAC 1 cut(s) 699
HpaII CCGG 4 cut(s) 189, 504, 1367, 1587
HphI GGTGA 5 cut(s) 203, 502, 1833, 2216, 2378
Hpy188I TCNGA 8 cut(s) 169, 323, 467, 1729, 2008, 2020, 2173, 2586
HpyAV CCTTC 7 cut(s) 260, 389, 406, 1055, 1202, 1452, 2030
HpyCH4III ACNGT 3 cut(s) 721, 1789, 2426
HpyCH4IV ACGT 2 cut(s) 1137, 2454
HpyF10VI GCNNNNNNNGC 4 cut(s) 99, 108, 2060, 2477
HpyF3I CTNAG 5 cut(s) 1728, 2005, 2259, 2594, 2671
HpySE526I ACGT 2 cut(s) 1137, 2454
HspAI GCGC 1 cut(s) 35
Kpn2I TCCGGA 1 cut(s) 1366
Ksp22I TGATCA 2 cut(s) 82, 318
KspAI GTTAAC 1 cut(s) 699
LguI GCTCTTC 1 cut(s) 941
LmnI GCTCC 6 cut(s) 255, 506, 891, 1577, 1613, 2203
Lsp1109I GCAGC 8 cut(s) 24, 763, 940, 1645, 1821, 2050, 2582, 2610
LweI GCATC 4 cut(s) 162, 764, 823, 2652
MaeI CTAG 8 cut(s) 65, 957, 1094, 1442, 1505, 1920, 2355, 2615
MaeII ACGT 2 cut(s) 1137, 2454
MaeIII GTNAC 4 cut(s) 295, 959, 1490, 2221
MboII GAAGA 9 cut(s) 928, 1474, 1546, 1549, 1552, 1555, 1880, 2052, 2302
MfeI CAATTG 2 cut(s) 759, 1382
MflI RGATCY 3 cut(s) 667, 1177, 1731
MhlI GDGCHC 2 cut(s) 773, 936
MlsI TGGCCA 1 cut(s) 1979
MluNI TGGCCA 1 cut(s) 1979
MlyI GAGTC 6 cut(s) 908, 953, 1232, 1440, 2206, 2233
MmeI TCCRAC 2 cut(s) 584, 1909
Mox20I TGGCCA 1 cut(s) 1979
MroI TCCGGA 1 cut(s) 1366
MroXI GAANNNNTTC 2 cut(s) 1088, 1252
MscI TGGCCA 1 cut(s) 1979
MseI TTAA 5 cut(s) 533, 585, 698, 1280, 1394
MslI CAYNNNNRTG 4 cut(s) 2118, 2630, 2657, 2660
Msp20I TGGCCA 1 cut(s) 1979
MspA1I CMGCKG 1 cut(s) 776
MspI CCGG 4 cut(s) 189, 504, 1367, 1587
MspR9I CCNGG 9 cut(s) 77, 505, 941, 1409, 1683, 2202, 2244, 2252, 2473
MunI CAATTG 2 cut(s) 759, 1382
Mva1269I GAATGC 1 cut(s) 912
MvaI CCWGG 8 cut(s) 77, 941, 1409, 1683, 2202, 2244, 2252, 2473
MwoI GCNNNNNNNGC 4 cut(s) 99, 108, 2060, 2477
NciI CCSGG 1 cut(s) 505
NcoI CCATGG 1 cut(s) 925
NlaIV GGNNCC 5 cut(s) 502, 510, 574, 669, 2256
NmuCI GTSAC 1 cut(s) 1490
NspI RCATGY 4 cut(s) 482, 865, 1655, 2502
PaeR7I CTCGAG 1 cut(s) 1697
PagI TCATGA 2 cut(s) 765, 2532
PceI AGGCCT 2 cut(s) 538, 1212
PciI ACATGT 2 cut(s) 478, 1651
PciSI GCTCTTC 1 cut(s) 941
PctI GAATGC 1 cut(s) 912
PdmI GAANNNNTTC 2 cut(s) 1088, 1252
PfeI GAWTC 4 cut(s) 270, 404, 821, 1248
PflMI CCANNNNNTGG 2 cut(s) 1574, 2207
PfoI TCCNGGA 1 cut(s) 939
PinAI ACCGGT 1 cut(s) 188
PkrI GCNGC 9 cut(s) 39, 594, 778, 955, 1660, 1836, 2065, 2572, 2600
PleI GAGTC 6 cut(s) 907, 952, 1232, 1440, 2206, 2233
PpsI GAGTC 6 cut(s) 907, 952, 1232, 1440, 2206, 2233
PpuMI RGGWCCY 1 cut(s) 573
PscI ACATGT 2 cut(s) 478, 1651
Psp124BI GAGCTC 1 cut(s) 936
Psp5II RGGWCCY 1 cut(s) 573
Psp6I CCWGG 8 cut(s) 75, 939, 1407, 1681, 2200, 2242, 2250, 2471
PspFI CCCAGC 1 cut(s) 2234
PspGI CCWGG 8 cut(s) 75, 939, 1407, 1681, 2200, 2242, 2250, 2471
PspN4I GGNNCC 5 cut(s) 502, 510, 574, 669, 2256
PspPI GGNCC 3 cut(s) 573, 1358, 2254
PspPPI RGGWCCY 1 cut(s) 573
PspXI VCTCGAGB 1 cut(s) 1697
PstI CTGCAG 1 cut(s) 2512
PstNI CAGNNNCTG 2 cut(s) 279, 2063
PsuI RGATCY 3 cut(s) 667, 1177, 1731
PvuII CAGCTG 1 cut(s) 776
RsaI GTAC 4 cut(s) 914, 1973, 2264, 2319
RsaNI GTAC 4 cut(s) 913, 1972, 2263, 2318
RseI CAYNNNNRTG 4 cut(s) 2118, 2630, 2657, 2660
SacI GAGCTC 1 cut(s) 936
SalI GTCGAC 1 cut(s) 722
SapI GCTCTTC 1 cut(s) 941
SaqAI TTAA 5 cut(s) 533, 585, 698, 1280, 1394
SatI GCNGC 9 cut(s) 38, 593, 777, 954, 1659, 1835, 2064, 2571, 2599
Sau96I GGNCC 3 cut(s) 573, 1358, 2254
SchI GAGTC 6 cut(s) 908, 953, 1232, 1440, 2206, 2233
ScrFI CCNGG 9 cut(s) 77, 505, 941, 1409, 1683, 2202, 2244, 2252, 2473
SduI GDGCHC 2 cut(s) 773, 936
SfaNI GCATC 4 cut(s) 162, 764, 823, 2652
SfcI CTRYAG 1 cut(s) 2508
Sfr274I CTCGAG 1 cut(s) 1697
SgrAI CRCCGGYG 1 cut(s) 188
SinI GGWCC 2 cut(s) 573, 1358
SlaI CTCGAG 1 cut(s) 1697
SmiI ATTTAAAT 1 cut(s) 1395
SmiMI CAYNNNNRTG 4 cut(s) 2118, 2630, 2657, 2660
SmlI CTYRAG 6 cut(s) 1067, 1697, 1736, 1818, 2324, 2640
SmoI CTYRAG 6 cut(s) 1067, 1697, 1736, 1818, 2324, 2640
SseBI AGGCCT 2 cut(s) 538, 1212
SsiI CCGC 3 cut(s) 111, 592, 2408
SspI AATATT 3 cut(s) 314, 851, 1329
SspMI CTAG 8 cut(s) 65, 957, 1094, 1442, 1505, 1920, 2355, 2615
SstI GAGCTC 1 cut(s) 936
StuI AGGCCT 2 cut(s) 538, 1212
StyD4I CCNGG 9 cut(s) 75, 503, 939, 1407, 1681, 2200, 2242, 2250, 2471
StyI CCWWGG 3 cut(s) 576, 925, 1257
SwaI ATTTAAAT 1 cut(s) 1395
TaaI ACNGT 3 cut(s) 721, 1789, 2426
TaiI ACGT 2 cut(s) 1140, 2457
TaqI TCGA 3 cut(s) 723, 1271, 1698
TatI WGTACW 3 cut(s) 912, 1971, 2317
TauI GCSGC 1 cut(s) 595
TfiI GAWTC 4 cut(s) 270, 404, 821, 1248
Tru1I TTAA 5 cut(s) 533, 585, 698, 1280, 1394
Tru9I TTAA 5 cut(s) 533, 585, 698, 1280, 1394
TscAI CASTG 6 cut(s) 21, 142, 414, 1086, 1695, 2341
TseFI GTSAC 1 cut(s) 1490
TseI GCWGC 8 cut(s) 37, 776, 953, 1658, 1834, 2063, 2570, 2598
Tsp45I GTSAC 1 cut(s) 1490
TspGWI ACGGA 1 cut(s) 501
TspRI CASTG 6 cut(s) 21, 142, 414, 1086, 1695, 2341
Van91I CCANNNNNTGG 2 cut(s) 1574, 2207
VpaK11BI GGWCC 2 cut(s) 573, 1358
XagI CCTNNNNNAGG 1 cut(s) 2674
XapI RAATTY 7 cut(s) 124, 394, 626, 808, 1088, 1517, 1590
XbaI TCTAGA 1 cut(s) 2354
XceI RCATGY 4 cut(s) 482, 865, 1655, 2502
XhoI CTCGAG 1 cut(s) 1697
XmiI GTMKAC 3 cut(s) 723, 968, 1074
XmnI GAANNNNTTC 2 cut(s) 1088, 1252
XspI CTAG 8 cut(s) 65, 957, 1094, 1442, 1505, 1920, 2355, 2615
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.