Rw5G026410

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000083
Physical Location & Seq
Forward (+)
38174233 .. 38187815
13583 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G026410.1

Sequence Viewer

Length: 2196 bp
ATGCTGACTCTACAACCTGTACCGAAAATCCAATACAATCACAACAATGCAAGCGCGAATAGACAAACAACTAACCAATATTCAAGGTTATGCTGTTATAATTTCGTCAATTTTCACGGAGTACTCCATACTGCTATTCAATTGTTTCTCAAGGATTTGGAGCTTTCAGTATTTTGTGAAAAGCGCAAGACCAGTCTTCTTGGTTCGTCTTTCTTGGAGCATGTTAAGGAGATATTGGAACCTGATACTTTTATTGCTGCAGCGCCTTGGGTGTACTACCCAATAATTGAAAAGTATTCAATATATTTGACATACCCTTTTATCTCCCTGGATCTTGATCTATCGGTGTGGATGACCAGCAAATGGACCAATGAAATGAGAGGCCACCTCAACTCTCTTTGGAGACTTGATTGTATGCCTAAATTCAAGGCCATAGCTCAAGAGCAAGGCCTTCGTGGGAGTCATCGATGGTCTGTCGGTGCTGCAGTGTTTGGAGCAACTGGAATGAGGAACAACATAGAGAGATCGGATACCCTAGGTGTGGCTTACGTAATGAGTACTGCAGGCACTGCGATGAACTCTAGTACTCCCATGTATATCGGTTGGAATCCACCAGATACAACTTCTGAATACTATGTGTACATGCACTTTGCTGAAATCCAGAAGTTGAAAGCCAACGAGTCCAGATCCTTCAATATCACCCTGAATGACAAACTTTTTTATGGACCTCTAGTGCCAAGTTACTTGAGTACAATTACTATTTACAGCCCAGCAGCGTTAACAGGAGGAAATTTTACATTCTCACTCTTCAAAACTGAGAATTCAACACTGCCACCGATCCTCAATGCCATGGAGTACTTCAGAGTCATAGATTTCTTGGACTTGTCCTCGAGCGGCTTGACAGGAGAGATAACTTCATATATATCCAATCTTGACATGTTACAATCTTTGGATTTATCTAACAATAGCTTAACTGGATCAGTACCTGAGTTTCTGACTAAATTGCCAAACCTGAAAGTCCTTAACTTGGAAAAGAACAAGCTGAATGGTTCACTTCCAAGTATGCTTATCGAAAAATCGACAAGTGGATCACTATCGTTAAGGGTCGGAGAAAATGAAAACTTATGTGCAGCAATTTCATGCAAAAAGAAGAAAAACAATGTATTCATTCCAATAATAGCAGCAGTTGGTGGATTTGCTATTCTGTTTGTAGCATCAGTTGTTATATTTTTTAGTATGAGAAGAAAAAGAAAACAAGTTGGAACAGCAGTGGCAGATTCCAACATTCAAATGGATTCATTAGAAAATTTCGAGTCCAAGAAGAGACAATTTACATACTCAGAGGTGCTGACAATTACTAACAACTTTCAGACAATTCTTGGGAAAGGTGGATTTGGACTGGTTTACCATGGCTATGTAGATGATACTCAAGTAGCTGTGAAAGTACTTTCTCCATCATCAGTTCAAGGATACCAACAATTTCAAGCAGAGGTCAAACTTCTTATGAGAGTTCATCATAGAAACTTGACTGGCCTTGTTGGATATTGCAATGAAGGAACGAACATGGCTCTCCTCTACGAATACATGGCCAATGGAAATCTGGAATCGCATCTCTTGGGTGAAGATAGCAATGTAACTCTCTTGACTTGGGAAAGTCGACTTAGAATAGCGGCTGATGCAGCACAAGGACTGGAGTATCTTCACAATGGTTGTAAGCCACCTATTATCCACAGAGATGTGAAGACACCAAATATTTTGTTAGCCGAAAATTTCCAAGCAAAGTTGGCTGATTTTGGCCTATCCAGAATGTTCTCAACTGACGAAGGCACTCATATGTCAACAGCTGTTGCTGGCACCCCTGGATACCTTGACCCTGAGTACCACATAACAGGCTGGTTGAATGAGAAGAGTGATGTATATAGCTTTGGAGTTGTTCTCTTGCAGATAATAACTAGCCGACCTGTGATATCAAGAACAGCCCAAGTGAATAGTCATGTAAGTCAATGGGTTAGCTCCATGCTTTCTAATGGGGATATCAAAAGTATTGTTGATCCTAAGTTACGAGGAGACTTTGAAATCAACTCTGCGTGGAAGGCTGTTGAGTTGGCAAGGGATTGTATTGAGGTGGTGACAAGACTCAAAGAGTGCTTGGGAGCAGAGTTGGCTCGAATAAATGAAAGTGGTAGGTTCAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

731

Amino Acids

81.68

Weight (kDa)

7.24

Isoelectric Point (pI)

36.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 181 - 289 6.5e-31 Malectin-like domain
LRR_8 PF13855 293 - 348 5.6e-06 Leucine rich repeat
LRR_4 PF12799 314 - 348 4e-07 Leucine Rich repeats (2 copies)
PK_Tyr_Ser-Thr PF07714 456 - 652 4.5e-41 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 458 - 675 4.5e-38 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 99
AccB1I GGYRCC 1 cut(s) 1853
AccB7I CCANNNNNTGG 1 cut(s) 363
AccBSI CCGCTC 1 cut(s) 894
AccI GTMKAC 1 cut(s) 1657
AccII CGCG 1 cut(s) 56
AciI CCGC 2 cut(s) 894, 1670
AclWI GGATC 6 cut(s) 339, 681, 832, 985, 1096, 2045
AcoI YGGCCR 1 cut(s) 1587
AcsI RAATTY 5 cut(s) 422, 790, 820, 1306, 1768
AcuI CTGAAG 1 cut(s) 844
AfiI CCNNNNNNNGG 3 cut(s) 363, 541, 1027
AflIII ACRYGT 1 cut(s) 936
AjnI CCWGG 2 cut(s) 327, 1858
AluBI AGCT 8 cut(s) 163, 437, 969, 1042, 1436, 1844, 1923, 2013
AluI AGCT 8 cut(s) 163, 437, 969, 1042, 1436, 1844, 1923, 2013
Alw26I GTCTC 3 cut(s) 397, 1318, 2061
AlwI GGATC 6 cut(s) 339, 681, 832, 985, 1096, 2045
AlwNI CAGNNNCTG 2 cut(s) 569, 986
Ama87I CYCGRG 1 cut(s) 889
AoxI GGCC 6 cut(s) 382, 429, 448, 1531, 1587, 1795
ApeKI GCWGC 7 cut(s) 257, 260, 482, 773, 1130, 1181, 1679
ApoI RAATTY 5 cut(s) 422, 790, 820, 1306, 1768
AspA2I CCTAGG 1 cut(s) 535
AspLEI GCGC 3 cut(s) 56, 186, 265
AspS9I GGNCC 2 cut(s) 366, 725
AsuHPI GGTGA 3 cut(s) 691, 1631, 2140
AvaI CYCGRG 1 cut(s) 889
AvaII GGWCC 2 cut(s) 366, 725
AvrII CCTAGG 1 cut(s) 535
BaeI ACNNNNGTAYC 4 cut(s) 1416, 1449, 1679, 1712
BalI TGGCCA 1 cut(s) 1589
BanI GGYRCC 1 cut(s) 1853
BbsI GAAGAC 2 cut(s) 188, 1748
BbvI GCAGC 7 cut(s) 244, 272, 469, 785, 1142, 1193, 1691
BccI CCATC 2 cut(s) 462, 1462
BcgI CGANNNNNNTGC 2 cut(s) 434, 468
BciT130I CCWGG 2 cut(s) 329, 1860
BciVI GTATCC 3 cut(s) 523, 1463, 1856
BcoDI GTCTC 3 cut(s) 397, 1318, 2061
BfaI CTAG 4 cut(s) 536, 582, 731, 1953
BfmI CTRYAG 3 cut(s) 258, 483, 561
BfoI RGCGCY 1 cut(s) 266
BfuI GTATCC 3 cut(s) 523, 1463, 1856
BisI GCNGC 9 cut(s) 258, 261, 483, 774, 895, 1131, 1182, 1671, 1680
BlnI CCTAGG 1 cut(s) 535
BlsI GCNGC 9 cut(s) 259, 262, 484, 775, 896, 1132, 1183, 1672, 1681
BmcAI AGTACT 5 cut(s) 123, 559, 586, 857, 1446
Bme1390I CCNGG 2 cut(s) 329, 1860
Bme18I GGWCC 2 cut(s) 366, 725
BmeT110I CYCGRG 1 cut(s) 889
BmgT120I GGNCC 2 cut(s) 366, 725
BmiI GGNNCC 2 cut(s) 240, 1855
BmrFI CCNGG 2 cut(s) 329, 1860
BmsI GCATC 3 cut(s) 1223, 1618, 1666
BpiI GAAGAC 2 cut(s) 188, 1748
BplI GAGNNNNNCTC 4 cut(s) 372, 404, 1920, 1952
BpmI CTGGAG 1 cut(s) 1712
BpuEI CTTGAG 4 cut(s) 134, 423, 766, 1413
Bsa29I ATCGAT 1 cut(s) 466
BsaAI YACGTR 1 cut(s) 550
BsaBI GATNNNNATC 2 cut(s) 336, 1093
BsaJI CCNNGG 6 cut(s) 266, 327, 535, 849, 1408, 1858
Bsc4I CCNNNNNNNGG 3 cut(s) 363, 541, 1027
Bse1I ACTGG 6 cut(s) 192, 505, 979, 1404, 1534, 1695
Bse3DI GCAATG 2 cut(s) 1555, 1636
Bse8I GATNNNNATC 2 cut(s) 336, 1093
BseBI CCWGG 2 cut(s) 329, 1860
BseCI ATCGAT 1 cut(s) 466
BseDI CCNNGG 6 cut(s) 266, 327, 535, 849, 1408, 1858
BseGI GGATG 1 cut(s) 357
BseJI GATNNNNATC 2 cut(s) 336, 1093
BseLI CCNNNNNNNGG 3 cut(s) 363, 541, 1027
BseMI GCAATG 2 cut(s) 1555, 1636
BseMII CTCAG 4 cut(s) 807, 978, 1353, 1866
BseNI ACTGG 6 cut(s) 192, 505, 979, 1404, 1534, 1695
BseRI GAGGAG 2 cut(s) 1562, 2079
BseXI GCAGC 7 cut(s) 244, 272, 469, 785, 1142, 1193, 1691
BseYI CCCAGC 1 cut(s) 769
BsgI GTGCAG 1 cut(s) 1149
Bsh1236I CGCG 1 cut(s) 56
BshFI GGCC 6 cut(s) 384, 431, 450, 1533, 1589, 1797
BshNI GGYRCC 1 cut(s) 1853
BshVI ATCGAT 1 cut(s) 466
BsiHKCI CYCGRG 1 cut(s) 889
BslI CCNNNNNNNGG 3 cut(s) 363, 541, 1027
BsmAI GTCTC 3 cut(s) 397, 1318, 2061
BsnI GGCC 6 cut(s) 384, 431, 450, 1533, 1589, 1797
BsoBI CYCGRG 1 cut(s) 889
Bsp1407I TGTACA 1 cut(s) 639
Bsp143I GATC 8 cut(s) 331, 337, 524, 686, 837, 977, 1088, 2050
Bsp19I CCATGG 2 cut(s) 849, 1408
BspACI CCGC 2 cut(s) 894, 1670
BspANI GGCC 6 cut(s) 384, 431, 450, 1533, 1589, 1797
BspCNI CTCAG 4 cut(s) 808, 979, 1352, 1867
BspDI ATCGAT 1 cut(s) 466
BspFNI CGCG 1 cut(s) 56
BspLI GGNNCC 2 cut(s) 240, 1855
BspMAI CTGCAG 3 cut(s) 262, 487, 565
BspPI GGATC 6 cut(s) 339, 681, 832, 985, 1096, 2045
BspT107I GGYRCC 1 cut(s) 1853
BsrBI CCGCTC 1 cut(s) 894
BsrDI GCAATG 2 cut(s) 1555, 1636
BsrGI TGTACA 1 cut(s) 639
BsrI ACTGG 6 cut(s) 192, 505, 979, 1404, 1534, 1695
BssECI CCNNGG 6 cut(s) 266, 327, 535, 849, 1408, 1858
BssMI GATC 8 cut(s) 331, 337, 524, 686, 837, 977, 1088, 2050
BssT1I CCWWGG 4 cut(s) 266, 535, 849, 1408
Bst2UI CCWGG 2 cut(s) 329, 1860
Bst6I CTCTTC 3 cut(s) 812, 1316, 1901
BstAPI GCANNNNNTGC 1 cut(s) 569
BstAUI TGTACA 1 cut(s) 639
BstBAI YACGTR 1 cut(s) 550
BstC8I GCNNGC 3 cut(s) 52, 565, 1852
BstDEI CTNAG 6 cut(s) 816, 987, 1339, 1661, 1875, 2055
BstDSI CCRYGG 2 cut(s) 849, 1408
BstF5I GGATG 1 cut(s) 357
BstFNI CGCG 1 cut(s) 56
BstH2I RGCGCY 1 cut(s) 266
BstHHI GCGC 3 cut(s) 56, 186, 265
BstKTI GATC 8 cut(s) 334, 340, 527, 689, 840, 980, 1091, 2053
BstMAI GTCTC 3 cut(s) 397, 1318, 2061
BstMBI GATC 8 cut(s) 331, 337, 524, 686, 837, 977, 1088, 2050
BstMWI GCNNNNNNNGC 6 cut(s) 569, 1676, 1679, 1784, 2093, 2162
BstNI CCWGG 2 cut(s) 329, 1860
BstNSI RCATGY 3 cut(s) 224, 646, 940
BstSCI CCNGG 2 cut(s) 327, 1858
BstSFI CTRYAG 3 cut(s) 258, 483, 561
BstSNI TACGTA 1 cut(s) 550
BstUI CGCG 1 cut(s) 56
BstV1I GCAGC 7 cut(s) 244, 272, 469, 785, 1142, 1193, 1691
BstV2I GAAGAC 2 cut(s) 188, 1748
BstX2I RGATCY 2 cut(s) 331, 686
BstYI RGATCY 2 cut(s) 331, 686
Bsu15I ATCGAT 1 cut(s) 466
BsuI GTATCC 3 cut(s) 523, 1463, 1856
BsuRI GGCC 6 cut(s) 384, 431, 450, 1533, 1589, 1797
BsuTUI ATCGAT 1 cut(s) 466
BtgI CCRYGG 2 cut(s) 849, 1408
BtgZI GCGATG 1 cut(s) 587
BtsCI GGATG 1 cut(s) 357
BtsI GCAGTG 4 cut(s) 492, 567, 827, 1275
BtsIMutI CAGTG 4 cut(s) 492, 567, 827, 1275
Cac8I GCNNGC 3 cut(s) 52, 565, 1852
CaiI CAGNNNCTG 2 cut(s) 569, 986
CfoI GCGC 3 cut(s) 56, 186, 265
Cfr13I GGNCC 2 cut(s) 366, 725
ClaI ATCGAT 1 cut(s) 466
DdeI CTNAG 6 cut(s) 816, 987, 1339, 1661, 1875, 2055
DpnI GATC 8 cut(s) 333, 339, 526, 688, 839, 979, 1090, 2052
DpnII GATC 8 cut(s) 331, 337, 524, 686, 837, 977, 1088, 2050
EaeI YGGCCR 1 cut(s) 1587
Eam1104I CTCTTC 3 cut(s) 812, 1316, 1901
EarI CTCTTC 3 cut(s) 812, 1316, 1901
Eco105I TACGTA 1 cut(s) 550
Eco130I CCWWGG 4 cut(s) 266, 535, 849, 1408
Eco147I AGGCCT 1 cut(s) 450
Eco32I GATATC 2 cut(s) 1968, 2035
Eco47I GGWCC 2 cut(s) 366, 725
Eco57I CTGAAG 1 cut(s) 844
Eco88I CYCGRG 1 cut(s) 889
EcoRI GAATTC 1 cut(s) 820
EcoRII CCWGG 2 cut(s) 327, 1858
EcoRV GATATC 2 cut(s) 1968, 2035
EcoT14I CCWWGG 4 cut(s) 266, 535, 849, 1408
ErhI CCWWGG 4 cut(s) 266, 535, 849, 1408
FauNDI CATATG 1 cut(s) 1833
FblI GTMKAC 1 cut(s) 1657
Fnu4HI GCNGC 9 cut(s) 258, 261, 483, 774, 895, 1131, 1182, 1671, 1680
FokI GGATG 1 cut(s) 364
Fsp4HI GCNGC 9 cut(s) 258, 261, 483, 774, 895, 1131, 1182, 1671, 1680
FspBI CTAG 4 cut(s) 536, 582, 731, 1953
GlaI GCGC 3 cut(s) 55, 185, 264
GluI GCNGC 9 cut(s) 258, 261, 483, 774, 895, 1131, 1182, 1671, 1680
GsaI CCCAGC 1 cut(s) 773
GsuI CTGGAG 1 cut(s) 1712
HaeII RGCGCY 1 cut(s) 266
HaeIII GGCC 6 cut(s) 384, 431, 450, 1533, 1589, 1797
HhaI GCGC 3 cut(s) 56, 186, 265
Hin6I GCGC 3 cut(s) 54, 184, 263
HinP1I GCGC 3 cut(s) 54, 184, 263
HincII GTYRAC 3 cut(s) 780, 1658, 1839
HindII GTYRAC 3 cut(s) 780, 1658, 1839
HpaI GTTAAC 1 cut(s) 780
HphI GGTGA 3 cut(s) 691, 1631, 2140
Hpy166II GTNNAC 7 cut(s) 274, 640, 780, 1052, 1405, 1658, 1839
Hpy188I TCNGA 7 cut(s) 529, 628, 863, 996, 1109, 1342, 1371
Hpy188III TCNNGA 9 cut(s) 335, 440, 661, 684, 932, 1601, 1642, 1803, 1971
Hpy8I GTNNAC 7 cut(s) 274, 640, 780, 1052, 1405, 1658, 1839
HpyAV CCTTC 5 cut(s) 461, 700, 1547, 1817, 2086
HpyCH4IV ACGT 1 cut(s) 549
HpyF10VI GCNNNNNNNGC 6 cut(s) 569, 1676, 1679, 1784, 2093, 2162
HpyF3I CTNAG 6 cut(s) 816, 987, 1339, 1661, 1875, 2055
HpySE526I ACGT 1 cut(s) 549
HspAI GCGC 3 cut(s) 54, 184, 263
KspAI GTTAAC 1 cut(s) 780
Kzo9I GATC 8 cut(s) 331, 337, 524, 686, 837, 977, 1088, 2050
LmnI GCTCC 5 cut(s) 160, 217, 494, 2018, 2153
Lsp1109I GCAGC 7 cut(s) 244, 272, 469, 785, 1142, 1193, 1691
LweI GCATC 3 cut(s) 1223, 1618, 1666
MaeI CTAG 4 cut(s) 536, 582, 731, 1953
MaeII ACGT 1 cut(s) 549
MaeIII GTNAC 5 cut(s) 740, 939, 1633, 2058, 2128
MalI GATC 8 cut(s) 333, 339, 526, 688, 839, 979, 1090, 2052
MbiI CCGCTC 1 cut(s) 894
MboI GATC 8 cut(s) 331, 337, 524, 686, 837, 977, 1088, 2050
MboII GAAGA 9 cut(s) 188, 799, 1162, 1254, 1333, 1634, 1691, 1753, 1918
MfeI CAATTG 1 cut(s) 140
MflI RGATCY 2 cut(s) 331, 686
MlsI TGGCCA 1 cut(s) 1589
MluNI TGGCCA 1 cut(s) 1589
MlyI GAGTC 5 cut(s) 469, 689, 873, 1322, 2130
MmeI TCCRAC 5 cut(s) 584, 1087, 1240, 1305, 1519
Mox20I TGGCCA 1 cut(s) 1589
MscI TGGCCA 1 cut(s) 1589
MseI TTAA 5 cut(s) 225, 779, 971, 1023, 1100
MslI CAYNNNNRTG 6 cut(s) 45, 572, 1289, 1413, 1734, 1832
Msp20I TGGCCA 1 cut(s) 1589
MspA1I CMGCKG 1 cut(s) 1844
MspR9I CCNGG 2 cut(s) 329, 1860
MunI CAATTG 1 cut(s) 140
MvaI CCWGG 2 cut(s) 329, 1860
MvnI CGCG 1 cut(s) 56
MwoI GCNNNNNNNGC 6 cut(s) 569, 1676, 1679, 1784, 2093, 2162
NcoI CCATGG 2 cut(s) 849, 1408
NdeI CATATG 1 cut(s) 1833
NdeII GATC 8 cut(s) 331, 337, 524, 686, 837, 977, 1088, 2050
NlaIV GGNNCC 2 cut(s) 240, 1855
NmuCI GTSAC 1 cut(s) 2128
NspI RCATGY 3 cut(s) 224, 646, 940
PaeR7I CTCGAG 1 cut(s) 889
PceI AGGCCT 1 cut(s) 450
PciI ACATGT 1 cut(s) 936
PfeI GAWTC 4 cut(s) 607, 1277, 1295, 1604
PflMI CCANNNNNTGG 1 cut(s) 363
PkrI GCNGC 9 cut(s) 259, 262, 484, 775, 896, 1132, 1183, 1672, 1681
PleI GAGTC 5 cut(s) 468, 688, 872, 1321, 2130
PpsI GAGTC 5 cut(s) 468, 688, 872, 1321, 2130
Ppu21I YACGTR 1 cut(s) 550
PscI ACATGT 1 cut(s) 936
PsiI TTATAA 1 cut(s) 99
Psp6I CCWGG 2 cut(s) 327, 1858
PspFI CCCAGC 1 cut(s) 769
PspGI CCWGG 2 cut(s) 327, 1858
PspN4I GGNNCC 2 cut(s) 240, 1855
PspPI GGNCC 2 cut(s) 366, 725
PspXI VCTCGAGB 1 cut(s) 889
PstI CTGCAG 3 cut(s) 262, 487, 565
PstNI CAGNNNCTG 2 cut(s) 569, 986
PsuI RGATCY 2 cut(s) 331, 686
PvuII CAGCTG 1 cut(s) 1844
RseI CAYNNNNRTG 6 cut(s) 45, 572, 1289, 1413, 1734, 1832
SalI GTCGAC 1 cut(s) 1656
SaqAI TTAA 5 cut(s) 225, 779, 971, 1023, 1100
SatI GCNGC 9 cut(s) 258, 261, 483, 774, 895, 1131, 1182, 1671, 1680
Sau3AI GATC 8 cut(s) 331, 337, 524, 686, 837, 977, 1088, 2050
Sau96I GGNCC 2 cut(s) 366, 725
ScaI AGTACT 5 cut(s) 123, 559, 586, 857, 1446
SchI GAGTC 5 cut(s) 469, 689, 873, 1322, 2130
ScrFI CCNGG 2 cut(s) 329, 1860
SfaNI GCATC 3 cut(s) 1223, 1618, 1666
SfcI CTRYAG 3 cut(s) 258, 483, 561
Sfr274I CTCGAG 1 cut(s) 889
SinI GGWCC 2 cut(s) 366, 725
SlaI CTCGAG 1 cut(s) 889
SmiMI CAYNNNNRTG 6 cut(s) 45, 572, 1289, 1413, 1734, 1832
SmlI CTYRAG 5 cut(s) 149, 438, 745, 889, 1428
SmoI CTYRAG 5 cut(s) 149, 438, 745, 889, 1428
SnaBI TACGTA 1 cut(s) 550
SseBI AGGCCT 1 cut(s) 450
SsiI CCGC 2 cut(s) 894, 1670
SspI AATATT 2 cut(s) 80, 1753
SspMI CTAG 4 cut(s) 536, 582, 731, 1953
StuI AGGCCT 1 cut(s) 450
StyD4I CCNGG 2 cut(s) 327, 1858
StyI CCWWGG 4 cut(s) 266, 535, 849, 1408
TaiI ACGT 1 cut(s) 552
TaqI TCGA 7 cut(s) 466, 890, 1071, 1079, 1311, 1657, 2167
TatI WGTACW 8 cut(s) 121, 273, 557, 584, 639, 749, 855, 1444
TauI GCSGC 2 cut(s) 897, 1673
TfiI GAWTC 4 cut(s) 607, 1277, 1295, 1604
Tru1I TTAA 5 cut(s) 225, 779, 971, 1023, 1100
Tru9I TTAA 5 cut(s) 225, 779, 971, 1023, 1100
TscAI CASTG 4 cut(s) 492, 574, 834, 1275
TseFI GTSAC 1 cut(s) 2128
TseI GCWGC 7 cut(s) 257, 260, 482, 773, 1130, 1181, 1679
Tsp45I GTSAC 1 cut(s) 2128
TspGWI ACGGA 1 cut(s) 132
TspRI CASTG 4 cut(s) 492, 574, 834, 1275
Van91I CCANNNNNTGG 1 cut(s) 363
VpaK11BI GGWCC 2 cut(s) 366, 725
XapI RAATTY 5 cut(s) 422, 790, 820, 1306, 1768
XceI RCATGY 3 cut(s) 224, 646, 940
XcmI CCANNNNNNNNNTGG 2 cut(s) 1288, 1597
XhoI CTCGAG 1 cut(s) 889
XmaJI CCTAGG 1 cut(s) 535
XmiI GTMKAC 1 cut(s) 1657
XspI CTAG 4 cut(s) 536, 582, 731, 1953
ZrmI AGTACT 5 cut(s) 123, 559, 586, 857, 1446
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.