Prupe.3G055500_v2.0.a1

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000083
Physical Location & Seq
Forward (+)
3930876 .. 3935501
4626 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G055500.1

Sequence Viewer

Length: 2646 bp
ATGAAATTTTACCCATCAATTAACGGCCAGATTGACGAAATGCTACGGAATGACGAAATTAACACCCGTGAGATATTAGCTAGAGGATGCTTTGTCTCAGGCTTCATCAGCATAGACTGCGGCCTACCGGAAACCTCTGCATACAGTGAGCAAGAAACAGGCATTAACTTTGTTTCAGATGCTACTTTCATAGACACTGGTGAAACTAAGTTCATACAATCTAATGATTTGCTAACCCTAAACTATCAGCCCTATCGGTATCTGAGGACGTTCCCTCAAGGAATTAGGAACTGCTACAACATAAACGTCACATTTGGGACTGAATACTTGATTCGAGCAGGCTTCTATTATGGGAATTATGATGCCAAAAATAAGTTGCCAGAATTCCAACTTCATCTTGGACCTAATTTGTGGGACACAGTGAATTTCACGTTTTCGTGGGCTGACACAACCAAGGAGATGATATATGTCCCAGTGAAAAATTATATACAGCTTTGTCTGGTCAACACAAGCAAAGGGGTTCCATTTATATCCACAATAGAACTCAGACCTTTACCTGCCAAATCTTATGTTACACAAACGGGTTCCTTTTTGGGACTTTTCTCGCGGTATCCAAATGATATTCATGATCGCATCTGGAAGGCTGATTACCTTGGTGGTTGGGCAGAACTAAGTACCTCACCCAATCTGTTTACAGACTCCAATCAAAATTCTCTCGAAACACCACCTCTTGTCATGAGCACTGCTGCCACGCCCAAAAATGCAAGCGAGCCCTTGGATTTCTACTGGTTTTCTAACGATAACAGTACGGAATATTATATTTACATGCACTTTGCAGAAGTTTTGCAGCTCCAACCCAACCAGTCCAGAAAGTTCAACATCACTCGCAATGGGAAGGTCTTTTATGGGCCAATGGCTCCTGCGTATTTAAACACGACCACTATTTACGGAAGAGTTCGGCCAACCGGGTTTTTAGGACAATTTTTTTCTTTTTCAATCTTGAAGACTGAAAAATCTACCCTTCCACCCATTCTGAATGCGTACGAGGTTTATTCAGTGAACCAATTGTTAGAACAGGAAACAAGCCAAGCAGATTTTGATGCAATCACAAACATCAAGTTGGCTTATCAAATTAAAAAGATCAACTGGCAAGGAGATCCATGCTCCCCTCAAGTTTACTCGTGGGACGGCCTCAAGTGTATCTATCCTACAAATGCGTCTGCAAGAATCATATCCTTGAACTTGTCCTCAAGTGGATTAACAGGGGAGATAGATCCTTCTCTATCCAATCTCGCAATGATACAGACTTTGGATTTATCTAACAACAAGTTAACAGGACCAGTTCCAGATTTCTTGTCTCAATTGCAGAATTTAACCGTCTTAAACTTAGAACAAAACCAACTCACAGGGCCAGTTCCGGCAGGACTCGTTGAAAGATGGAATGATGGTTTGCTATCGTTAAGTTTGTGCGAAAATCCAAATATCTCCGGAAATGTTTATTGCAACGACAACAAGAAAAAGAAGAAGAAGAAGAAGCATGGTTTCCTTATTCCGGTAGTTGTTTCAGTCGTTGGAGTTTCAGTCCTGTTACTAAGTGCAATAGCTATCTGGTGGTGGGGTTTTAGAAAGAAATCAAAACAACGAGATAATGTCTCAGAAGCACAACCGACCATTCAACTAGAGTCCACAAAGCGACAACTTACATGCTCTGAGATACTACAGATCACAAACAACTTTGAAAGGGTTCTTGGAAGAGGTGGATTTGGAACAGTTTATCATGGCTACGTAGGCGATACTCAAGTAGCTGTTAAGATGCTTTCGCCATCATCGGTCCAAGGGTTTCAACAATTTCATTCAGAGGTTAATCTTCTGACGAGAGTTCATCATAGAAACTTGACTAGCCTTGTTGGGTATTGCGAAGATGAAACAAAAATTGGGCTGGTCTACGAGTACATGGCCAATGGAAACTTACAAGAGTGCCTTTCAGATAGAAATATCTTGAGTTGGGAAGATAGACTTAGAATAGCAGTAGACGCCGCACAAGGACTGGAGTATCTGCACTATGGTTGTAAGCCACCTATAATCCACAGGGATGTAAAATCAACAAACATCTTGCTGAGTGAAAACTTCCAAGCCAAACTATCCGATTTTGGCCTATCCAGAATCTTCCCTACCGATACTGGGACTCATATATCAACAGTTGTTGCTGGAACTCCTGGGTACCTTGACCCTGATTACTACGCGTCAAACAGGTTAAATGAGAAAAGTGATGTCTATAGCTTTGGGATTGTACTGTTGGAGATTATCACAAGTCGTCCTGTTTTTTCGAAAACACATGAGAAGATATACATCAGTGAATGGGTTGGCTTCATGCTTGCAAATGGAGACATTTATAGCATTCTTGATCCCAGGCTAGGAGGAAATTTCAATACTAACTCTGTCTGGAAAGCTGTTGAAATAGCAATGGCATGTGTATGTAAAGATTCCATCGAAAGGCCGATCATGAGCCAGGTAGTGGTGGAACTGAAGGAGTGTTTGGCAATGGAACTGGCAAGAACAAAGCAGAGCCATCAAACCGAATCTATAAATTCCATTGGGATAATGCCTAACAATTCCATTGCTATGCTACATCCCTCTGTTAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

882

Amino Acids

99.22

Weight (kDa)

6.04

Isoelectric Point (pI)

39.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 565
Acc65I GGTACC 1 cut(s) 2220
AccB1I GGYRCC 1 cut(s) 2220
AccB7I CCANNNNNTGG 1 cut(s) 2515
AccI GTMKAC 2 cut(s) 1944, 2031
AccII CGCG 2 cut(s) 607, 2243
AccIII TCCGGA 1 cut(s) 1487
AciI CCGC 3 cut(s) 120, 607, 2037
AclWI GGATC 3 cut(s) 1151, 1268, 2399
AcoI YGGCCR 3 cut(s) 25, 959, 1956
AcsI RAATTY 7 cut(s) 5, 383, 424, 709, 1369, 2422, 2587
AcuI CTGAAG 1 cut(s) 2546
AcyI GRCGYC 1 cut(s) 2034
AfaI GTAC 6 cut(s) 676, 808, 1043, 1952, 2222, 2292
AfiI CCNNNNNNNGG 6 cut(s) 1552, 2181, 2414, 2493, 2515, 2640
AflIII ACRYGT 1 cut(s) 2241
AjnI CCWGG 3 cut(s) 2215, 2408, 2508
AjuI GAANNNNNNNTTGG 6 cut(s) 1731, 1763, 1917, 1949, 2519, 2551
AluBI AGCT 7 cut(s) 80, 493, 850, 1604, 1805, 2280, 2450
AluI AGCT 7 cut(s) 80, 493, 850, 1604, 1805, 2280, 2450
Alw21I GWGCWC 1 cut(s) 743
Alw26I GTCTC 4 cut(s) 100, 1362, 1657, 2379
AlwI GGATC 3 cut(s) 1151, 1268, 2399
Aor13HI TCCGGA 1 cut(s) 1487
AoxI GGCC 9 cut(s) 25, 121, 908, 959, 1189, 1409, 1956, 2152, 2495
ApeKI GCWGC 2 cut(s) 746, 847
ApoI RAATTY 7 cut(s) 5, 383, 424, 709, 1369, 2422, 2587
Asp700I GAANNNNTTC 1 cut(s) 1743
Asp718I GGTACC 1 cut(s) 2220
AspS9I GGNCC 5 cut(s) 401, 908, 1337, 1409, 1831
AsuC2I CCSGG 1 cut(s) 967
AsuHPI GGTGA 2 cut(s) 212, 672
AsuII TTCGAA 1 cut(s) 2327
AvaII GGWCC 3 cut(s) 401, 1337, 1831
BaeI ACNNNNGTAYC 4 cut(s) 1785, 1818, 2036, 2069
BalI TGGCCA 1 cut(s) 1958
BanI GGYRCC 1 cut(s) 2220
BanII GRGCYC 1 cut(s) 774
BarI GAAGNNNNNNTAC 2 cut(s) 632, 664
BauI CACGAG 1 cut(s) 1180
BbsI GAAGAC 1 cut(s) 1010
Bbv12I GWGCWC 1 cut(s) 743
BbvI GCAGC 2 cut(s) 733, 859
BccI CCATC 6 cut(s) 22, 1431, 1439, 1831, 2495, 2577
BceAI ACGGC 2 cut(s) 40, 1204
BciT130I CCWGG 3 cut(s) 2217, 2410, 2510
BciVI GTATCC 1 cut(s) 621
BcnI CCSGG 1 cut(s) 967
BcoDI GTCTC 4 cut(s) 100, 1362, 1657, 2379
BfaI CTAG 4 cut(s) 81, 1679, 1899, 2414
BfmI CTRYAG 2 cut(s) 1718, 2275
BfuAI ACCTGC 1 cut(s) 565
BfuI GTATCC 1 cut(s) 621
BisI GCNGC 4 cut(s) 121, 747, 848, 2037
BlsI GCNGC 4 cut(s) 122, 748, 849, 2038
Bme1390I CCNGG 4 cut(s) 967, 2217, 2410, 2510
Bme18I GGWCC 3 cut(s) 401, 1337, 1831
BmgT120I GGNCC 5 cut(s) 401, 908, 1337, 1409, 1831
BmiI GGNNCC 4 cut(s) 522, 586, 918, 2222
BmrFI CCNGG 4 cut(s) 967, 2217, 2410, 2510
BmrI ACTGGG 2 cut(s) 467, 2190
BmsI GCATC 6 cut(s) 77, 169, 352, 642, 1090, 1803
BmuI ACTGGG 2 cut(s) 467, 2190
BpiI GAAGAC 1 cut(s) 1010
BpmI CTGGAG 1 cut(s) 2069
Bpu14I TTCGAA 1 cut(s) 2327
BpuEI CTTGAG 6 cut(s) 261, 1155, 1178, 1234, 1782, 2020
BpuMI CCSGG 1 cut(s) 967
BsaAI YACGTR 1 cut(s) 1786
BsaBI GATNNNNATC 1 cut(s) 2348
BsaHI GRCGYC 1 cut(s) 2034
BsaJI CCNNGG 6 cut(s) 453, 652, 774, 1834, 2216, 2408
BsaWI WCCGGW 3 cut(s) 127, 1487, 1552
BsaXI ACNNNNNCTCC 2 cut(s) 1566, 1596
Bsc4I CCNNNNNNNGG 6 cut(s) 1552, 2181, 2414, 2493, 2515, 2640
Bse3DI GCAATG 5 cut(s) 895, 1302, 2469, 2547, 2616
Bse8I GATNNNNATC 1 cut(s) 2348
BseAI TCCGGA 1 cut(s) 1487
BseBI CCWGG 3 cut(s) 2217, 2410, 2510
BseDI CCNNGG 6 cut(s) 453, 652, 774, 1834, 2216, 2408
BseGI GGATG 3 cut(s) 92, 2098, 2629
BseJI GATNNNNATC 1 cut(s) 2348
BseLI CCNNNNNNNGG 6 cut(s) 1552, 2181, 2414, 2493, 2515, 2640
BseMI GCAATG 5 cut(s) 895, 1302, 2469, 2547, 2616
BseMII CTCAG 6 cut(s) 111, 254, 559, 1668, 1701, 2108
BseXI GCAGC 2 cut(s) 733, 859
BsgI GTGCAG 1 cut(s) 2042
Bsh1236I CGCG 2 cut(s) 607, 2243
BshFI GGCC 9 cut(s) 27, 123, 910, 961, 1191, 1411, 1958, 2154, 2497
BshNI GGYRCC 1 cut(s) 2220
BsiHKAI GWGCWC 1 cut(s) 743
BsiSI CCGG 5 cut(s) 128, 966, 1418, 1488, 1553
BsiWI CGTACG 1 cut(s) 1041
BslFI GGGAC 6 cut(s) 331, 428, 455, 609, 1199, 2197
BslI CCNNNNNNNGG 6 cut(s) 1552, 2181, 2414, 2493, 2515, 2640
BsmAI GTCTC 4 cut(s) 100, 1362, 1657, 2379
BsmFI GGGAC 6 cut(s) 331, 428, 455, 609, 1199, 2197
BsmI GAATGC 2 cut(s) 1042, 2397
BsnI GGCC 9 cut(s) 27, 123, 910, 961, 1191, 1411, 1958, 2154, 2497
Bsp119I TTCGAA 1 cut(s) 2327
Bsp1286I GDGCHC 2 cut(s) 743, 774
Bsp13I TCCGGA 1 cut(s) 1487
Bsp143I GATC 7 cut(s) 628, 1140, 1156, 1273, 1722, 2404, 2499
BspACI CCGC 3 cut(s) 120, 607, 2037
BspANI GGCC 9 cut(s) 27, 123, 910, 961, 1191, 1411, 1958, 2154, 2497
BspCNI CTCAG 6 cut(s) 110, 255, 558, 1667, 1702, 2109
BspEI TCCGGA 1 cut(s) 1487
BspFNI CGCG 2 cut(s) 607, 2243
BspHI TCATGA 3 cut(s) 625, 735, 2502
BspLI GGNNCC 4 cut(s) 522, 586, 918, 2222
BspMI ACCTGC 1 cut(s) 565
BspPI GGATC 3 cut(s) 1151, 1268, 2399
BspT104I TTCGAA 1 cut(s) 2327
BspT107I GGYRCC 1 cut(s) 2220
BsrDI GCAATG 5 cut(s) 895, 1302, 2469, 2547, 2616
BssECI CCNNGG 6 cut(s) 453, 652, 774, 1834, 2216, 2408
BssMI GATC 7 cut(s) 628, 1140, 1156, 1273, 1722, 2404, 2499
BssNI GRCGYC 1 cut(s) 2034
BssSI CACGAG 1 cut(s) 1180
BssT1I CCWWGG 4 cut(s) 453, 652, 774, 1834
Bst2BI CACGAG 1 cut(s) 1180
Bst2UI CCWGG 3 cut(s) 2217, 2410, 2510
Bst4CI ACNGT 7 cut(s) 146, 421, 806, 1378, 1771, 2200, 2295
Bst6I CTCTTC 2 cut(s) 946, 1747
BstACI GRCGYC 1 cut(s) 2034
BstAPI GCANNNNNTGC 1 cut(s) 117
BstBAI YACGTR 1 cut(s) 1786
BstBI TTCGAA 1 cut(s) 2327
BstC8I GCNNGC 4 cut(s) 340, 766, 770, 2376
BstENI CCTNNNNNAGG 1 cut(s) 2638
BstF5I GGATG 3 cut(s) 92, 2098, 2629
BstFNI CGCG 2 cut(s) 607, 2243
BstKTI GATC 7 cut(s) 631, 1143, 1159, 1276, 1725, 2407, 2502
BstMAI GTCTC 4 cut(s) 100, 1362, 1657, 2379
BstMBI GATC 7 cut(s) 628, 1140, 1156, 1273, 1722, 2404, 2499
BstMWI GCNNNNNNNGC 4 cut(s) 108, 117, 1788, 2033
BstNI CCWGG 3 cut(s) 2217, 2410, 2510
BstNSI RCATGY 3 cut(s) 829, 1707, 2472
BstSCI CCNGG 4 cut(s) 965, 2215, 2408, 2508
BstSFI CTRYAG 2 cut(s) 1718, 2275
BstSNI TACGTA 1 cut(s) 1786
BstUI CGCG 2 cut(s) 607, 2243
BstV1I GCAGC 2 cut(s) 733, 859
BstV2I GAAGAC 1 cut(s) 1010
BstX2I RGATCY 2 cut(s) 1156, 1273
BstYI RGATCY 2 cut(s) 1156, 1273
BsuI GTATCC 1 cut(s) 621
BsuRI GGCC 9 cut(s) 27, 123, 910, 961, 1191, 1411, 1958, 2154, 2497
BtsCI GGATG 3 cut(s) 92, 2098, 2629
BtsI GCAGTG 1 cut(s) 741
BtsIMutI CAGTG 7 cut(s) 151, 195, 426, 480, 741, 1062, 2359
BveI ACCTGC 1 cut(s) 565
Cac8I GCNNGC 4 cut(s) 340, 766, 770, 2376
CciI TCATGA 3 cut(s) 625, 735, 2502
Cfr13I GGNCC 5 cut(s) 401, 908, 1337, 1409, 1831
CseI GACGC 3 cut(s) 1206, 2042, 2232
Csp6I GTAC 6 cut(s) 675, 807, 1042, 1951, 2221, 2291
CviQI GTAC 6 cut(s) 675, 807, 1042, 1951, 2221, 2291
DpnI GATC 7 cut(s) 630, 1142, 1158, 1275, 1724, 2406, 2501
DpnII GATC 7 cut(s) 628, 1140, 1156, 1273, 1722, 2404, 2499
DraI TTTAAA 1 cut(s) 930
EaeI YGGCCR 3 cut(s) 25, 959, 1956
Eam1104I CTCTTC 2 cut(s) 946, 1747
EarI CTCTTC 2 cut(s) 946, 1747
Eco105I TACGTA 1 cut(s) 1786
Eco130I CCWWGG 4 cut(s) 453, 652, 774, 1834
Eco24I GRGCYC 1 cut(s) 774
Eco47I GGWCC 3 cut(s) 401, 1337, 1831
Eco57I CTGAAG 1 cut(s) 2546
EcoNI CCTNNNNNAGG 1 cut(s) 2638
EcoRI GAATTC 1 cut(s) 383
EcoRII CCWGG 3 cut(s) 2215, 2408, 2508
EcoT14I CCWWGG 4 cut(s) 453, 652, 774, 1834
EcoT38I GRGCYC 1 cut(s) 774
ErhI CCWWGG 4 cut(s) 453, 652, 774, 1834
FalI AAGNNNNNCTT 4 cut(s) 1965, 1997, 2001, 2033
FaqI GGGAC 6 cut(s) 331, 428, 455, 609, 1199, 2197
FblI GTMKAC 2 cut(s) 1944, 2031
Fnu4HI GCNGC 4 cut(s) 121, 747, 848, 2037
FokI GGATG 3 cut(s) 99, 2105, 2616
FriOI GRGCYC 1 cut(s) 774
Fsp4HI GCNGC 4 cut(s) 121, 747, 848, 2037
FspBI CTAG 4 cut(s) 81, 1679, 1899, 2414
GluI GCNGC 4 cut(s) 121, 747, 848, 2037
GsuI CTGGAG 1 cut(s) 2069
HaeIII GGCC 9 cut(s) 27, 123, 910, 961, 1191, 1411, 1958, 2154, 2497
HapII CCGG 5 cut(s) 128, 966, 1418, 1488, 1553
HgaI GACGC 3 cut(s) 1206, 2042, 2232
Hin1I GRCGYC 1 cut(s) 2034
HincII GTYRAC 2 cut(s) 505, 1332
HindII GTYRAC 2 cut(s) 505, 1332
HinfI GANTC 9 cut(s) 331, 698, 1227, 1425, 1682, 2163, 2185, 2483, 2579
HpaI GTTAAC 1 cut(s) 1332
HpaII CCGG 5 cut(s) 128, 966, 1418, 1488, 1553
HphI GGTGA 2 cut(s) 212, 672
Hpy166II GTNNAC 8 cut(s) 505, 693, 1060, 1177, 1332, 1686, 1945, 2032
Hpy8I GTNNAC 8 cut(s) 505, 693, 1060, 1177, 1332, 1686, 1945, 2032
HpyAV CCTTC 5 cut(s) 634, 889, 1031, 1287, 2521
HpyCH4III ACNGT 7 cut(s) 146, 421, 806, 1378, 1771, 2200, 2295
HpyCH4IV ACGT 4 cut(s) 269, 306, 431, 1785
HpyF10VI GCNNNNNNNGC 4 cut(s) 108, 117, 1788, 2033
HpySE526I ACGT 4 cut(s) 269, 306, 431, 1785
Hsp92I GRCGYC 1 cut(s) 2034
Kpn2I TCCGGA 1 cut(s) 1487
KpnI GGTACC 1 cut(s) 2224
KspAI GTTAAC 1 cut(s) 1332
Kzo9I GATC 7 cut(s) 628, 1140, 1156, 1273, 1722, 2404, 2499
LmnI GCTCC 3 cut(s) 855, 922, 1169
Lsp1109I GCAGC 2 cut(s) 733, 859
LweI GCATC 6 cut(s) 77, 169, 352, 642, 1090, 1803
MaeI CTAG 4 cut(s) 81, 1679, 1899, 2414
MaeII ACGT 4 cut(s) 269, 306, 431, 1785
MaeIII GTNAC 3 cut(s) 307, 571, 1587
MalI GATC 7 cut(s) 630, 1142, 1158, 1275, 1724, 2406, 2501
MboI GATC 7 cut(s) 628, 1140, 1156, 1273, 1722, 2404, 2499
MfeI CAATTG 2 cut(s) 1064, 1361
MflI RGATCY 2 cut(s) 1156, 1273
MhlI GDGCHC 2 cut(s) 743, 774
MlsI TGGCCA 1 cut(s) 1958
MluI ACGCGT 1 cut(s) 2241
MluNI TGGCCA 1 cut(s) 1958
MlyI GAGTC 4 cut(s) 692, 1419, 1691, 2179
MmeI TCCRAC 4 cut(s) 412, 877, 1552, 2277
Mox20I TGGCCA 1 cut(s) 1958
MroI TCCGGA 1 cut(s) 1487
MroXI GAANNNNTTC 1 cut(s) 1743
MscI TGGCCA 1 cut(s) 1958
MslI CAYNNNNRTG 3 cut(s) 2091, 2473, 2621
Msp20I TGGCCA 1 cut(s) 1958
MspI CCGG 5 cut(s) 128, 966, 1418, 1488, 1553
MspR9I CCNGG 4 cut(s) 967, 2217, 2410, 2510
MunI CAATTG 2 cut(s) 1064, 1361
Mva1269I GAATGC 2 cut(s) 1042, 2397
MvaI CCWGG 3 cut(s) 2217, 2410, 2510
MvnI CGCG 2 cut(s) 607, 2243
MwoI GCNNNNNNNGC 4 cut(s) 108, 117, 1788, 2033
NciI CCSGG 1 cut(s) 967
NdeII GATC 7 cut(s) 628, 1140, 1156, 1273, 1722, 2404, 2499
NlaIV GGNNCC 4 cut(s) 522, 586, 918, 2222
NmuCI GTSAC 1 cut(s) 307
NspI RCATGY 3 cut(s) 829, 1707, 2472
NspV TTCGAA 1 cut(s) 2327
PagI TCATGA 3 cut(s) 625, 735, 2502
PctI GAATGC 2 cut(s) 1042, 2397
PdmI GAANNNNTTC 1 cut(s) 1743
PfeI GAWTC 5 cut(s) 331, 1227, 2163, 2483, 2579
Pfl23II CGTACG 1 cut(s) 1041
PflMI CCANNNNNTGG 1 cut(s) 2515
PkrI GCNGC 4 cut(s) 122, 748, 849, 2038
PleI GAGTC 4 cut(s) 692, 1419, 1690, 2179
PpsI GAGTC 4 cut(s) 692, 1419, 1690, 2179
Ppu21I YACGTR 1 cut(s) 1786
Psp6I CCWGG 3 cut(s) 2215, 2408, 2508
PspGI CCWGG 3 cut(s) 2215, 2408, 2508
PspLI CGTACG 1 cut(s) 1041
PspN4I GGNNCC 4 cut(s) 522, 586, 918, 2222
PspPI GGNCC 5 cut(s) 401, 908, 1337, 1409, 1831
PsuI RGATCY 2 cut(s) 1156, 1273
RsaI GTAC 6 cut(s) 676, 808, 1043, 1952, 2222, 2292
RsaNI GTAC 6 cut(s) 675, 807, 1042, 1951, 2221, 2291
RseI CAYNNNNRTG 3 cut(s) 2091, 2473, 2621
SatI GCNGC 4 cut(s) 121, 747, 848, 2037
Sau3AI GATC 7 cut(s) 628, 1140, 1156, 1273, 1722, 2404, 2499
Sau96I GGNCC 5 cut(s) 401, 908, 1337, 1409, 1831
SchI GAGTC 4 cut(s) 692, 1419, 1691, 2179
ScrFI CCNGG 4 cut(s) 967, 2217, 2410, 2510
SduI GDGCHC 2 cut(s) 743, 774
SfaNI GCATC 6 cut(s) 77, 169, 352, 642, 1090, 1803
SfcI CTRYAG 2 cut(s) 1718, 2275
SfuI TTCGAA 1 cut(s) 2327
SinI GGWCC 3 cut(s) 401, 1337, 1831
SmiMI CAYNNNNRTG 3 cut(s) 2091, 2473, 2621
SmlI CTYRAG 6 cut(s) 276, 1170, 1193, 1249, 1797, 1999
SmoI CTYRAG 6 cut(s) 276, 1170, 1193, 1249, 1797, 1999
SnaBI TACGTA 1 cut(s) 1786
SsiI CCGC 3 cut(s) 120, 607, 2037
SspI AATATT 1 cut(s) 815
SspMI CTAG 4 cut(s) 81, 1679, 1899, 2414
StyD4I CCNGG 4 cut(s) 965, 2215, 2408, 2508
StyI CCWWGG 4 cut(s) 453, 652, 774, 1834
TaaI ACNGT 7 cut(s) 146, 421, 806, 1378, 1771, 2200, 2295
TaiI ACGT 4 cut(s) 272, 309, 434, 1788
TaqI TCGA 4 cut(s) 334, 717, 2327, 2490
TaqII GACCGA 1 cut(s) 1819
TatI WGTACW 2 cut(s) 1950, 2290
TauI GCSGC 2 cut(s) 123, 2039
TfiI GAWTC 5 cut(s) 331, 1227, 2163, 2483, 2579
TscAI CASTG 7 cut(s) 151, 202, 426, 480, 748, 1062, 2359
TseFI GTSAC 1 cut(s) 307
TseI GCWGC 2 cut(s) 746, 847
Tsp45I GTSAC 1 cut(s) 307
TspGWI ACGGA 3 cut(s) 61, 824, 963
TspRI CASTG 7 cut(s) 151, 202, 426, 480, 748, 1062, 2359
Van91I CCANNNNNTGG 1 cut(s) 2515
VpaK11BI GGWCC 3 cut(s) 401, 1337, 1831
XagI CCTNNNNNAGG 1 cut(s) 2638
XapI RAATTY 7 cut(s) 5, 383, 424, 709, 1369, 2422, 2587
XceI RCATGY 3 cut(s) 829, 1707, 2472
XcmI CCANNNNNNNNNTGG 1 cut(s) 395
XmiI GTMKAC 2 cut(s) 1944, 2031
XmnI GAANNNNTTC 1 cut(s) 1743
XspI CTAG 4 cut(s) 81, 1679, 1899, 2414
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.