AT1G51840

leucine-rich repeat protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
19249401 .. 19250863
1463 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G51840.1

Sequence Viewer

Length: 624 bp
ATGTGGACAGTCAGGAGAACCATGGAGAGACATTGTGTGTTCGTTACCATTTTTGTGCTAATACTTCATCTTGTTCAAGCTCAAAATCAAACCGGATTCATTAGTGTAGATTGCGGTTTATCCCCTCCCGAGTCACCTTACAATGCACCTCAAACAGGTTTAACATATACATCAGATACCGGTTTAATAAACACTGGGAAGACTGGTAGAATCGCCAAGGATTTCGAACCATTCGTGGATAAGCCGGCTTTGACAATGAGATACTTTCCAGACGGAATACGAAACTGCTACAATCTAAATGTCACCCGCGACACCAATTATCTGATCAAGGCCACCTTCGTTTATGGAAATTATGATGGGCTTAATGTTGACCCGAACTTCGACCTTTACCTCGGTCCGAATTTATGGACAACGGTGAGTAGTAATGACACGACAGAGGAGATCATCCATGTGACCAAATTCAATTCTTTGCAGATATGTCTTGTTAAGACGGGAATAAGTATACCTTTTATAAATGTTTTGGAGCTCCGACCATTGAAGAAAAATGTATACGCTACTCAAAGCGGTTCATTGAAGTACTTATTCAGGATGTATGTTAGCAATTCAAGTCGTCGTATAAGGTAA

Protein Analysis

207

Amino Acids

23.57

Weight (kDa)

9.03

Isoelectric Point (pI)

30.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 36 - 206 3.5e-67 Malectin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 512
AccI GTMKAC 2 cut(s) 502, 549
AccII CGCG 1 cut(s) 309
AciI CCGC 3 cut(s) 114, 307, 564
AcsI RAATTY 2 cut(s) 400, 458
AfaI GTAC 1 cut(s) 578
AfiI CCNNNNNNNGG 1 cut(s) 155
AgeI ACCGGT 1 cut(s) 179
AgsI TTSAA 5 cut(s) 77, 463, 538, 574, 606
AluBI AGCT 2 cut(s) 80, 526
AluI AGCT 2 cut(s) 80, 526
Alw21I GWGCWC 1 cut(s) 528
Alw26I GTCTC 1 cut(s) 22
Ama87I CYCGRG 1 cut(s) 128
AoxI GGCC 1 cut(s) 330
ApoI RAATTY 2 cut(s) 400, 458
ArsI GACNNNNNNTTYG 2 cut(s) 362, 394
AsiGI ACCGGT 1 cut(s) 179
AspS9I GGNCC 1 cut(s) 395
AsuHPI GGTGA 3 cut(s) 126, 295, 427
AsuII TTCGAA 1 cut(s) 225
AvaI CYCGRG 1 cut(s) 128
AvaII GGWCC 1 cut(s) 395
BanII GRGCYC 1 cut(s) 528
BbsI GAAGAC 1 cut(s) 206
Bbv12I GWGCWC 1 cut(s) 528
BccI CCATC 1 cut(s) 350
BclI TGATCA 1 cut(s) 324
BcoDI GTCTC 1 cut(s) 22
BmcAI AGTACT 1 cut(s) 578
Bme18I GGWCC 1 cut(s) 395
BmeT110I CYCGRG 1 cut(s) 128
BmgT120I GGNCC 1 cut(s) 395
BmrI ACTGGG 1 cut(s) 204
BmuI ACTGGG 1 cut(s) 204
BpiI GAAGAC 1 cut(s) 206
Bpu14I TTCGAA 1 cut(s) 225
BsaJI CCNNGG 3 cut(s) 21, 216, 391
BsaWI WCCGGW 2 cut(s) 92, 179
Bsc4I CCNNNNNNNGG 1 cut(s) 155
Bse118I RCCGGY 2 cut(s) 179, 244
Bse1I ACTGG 2 cut(s) 199, 208
BseDI CCNNGG 3 cut(s) 21, 216, 391
BseGI GGATG 2 cut(s) 444, 594
BseLI CCNNNNNNNGG 1 cut(s) 155
BseNI ACTGG 2 cut(s) 199, 208
BseRI GAGGAG 1 cut(s) 452
Bsh1236I CGCG 1 cut(s) 309
BshFI GGCC 1 cut(s) 332
BshTI ACCGGT 1 cut(s) 179
BsiHKAI GWGCWC 1 cut(s) 528
BsiHKCI CYCGRG 1 cut(s) 128
BsiSI CCGG 3 cut(s) 93, 180, 245
BslI CCNNNNNNNGG 1 cut(s) 155
BsmAI GTCTC 1 cut(s) 22
BsnI GGCC 1 cut(s) 332
BsoBI CYCGRG 1 cut(s) 128
Bsp119I TTCGAA 1 cut(s) 225
Bsp1286I GDGCHC 1 cut(s) 528
Bsp143I GATC 2 cut(s) 324, 441
Bsp19I CCATGG 1 cut(s) 21
BspACI CCGC 3 cut(s) 114, 307, 564
BspANI GGCC 1 cut(s) 332
BspFNI CGCG 1 cut(s) 309
BspT104I TTCGAA 1 cut(s) 225
BsrFI RCCGGY 2 cut(s) 179, 244
BsrI ACTGG 2 cut(s) 199, 208
BssAI RCCGGY 2 cut(s) 179, 244
BssECI CCNNGG 3 cut(s) 21, 216, 391
BssMI GATC 2 cut(s) 324, 441
BssNAI GTATAC 2 cut(s) 503, 550
BssT1I CCWWGG 2 cut(s) 21, 216
Bst1107I GTATAC 2 cut(s) 503, 550
Bst4CI ACNGT 2 cut(s) 10, 415
BstBI TTCGAA 1 cut(s) 225
BstC8I GCNNGC 1 cut(s) 246
BstDSI CCRYGG 1 cut(s) 21
BstENI CCTNNNNNAGG 1 cut(s) 153
BstF5I GGATG 2 cut(s) 444, 594
BstFNI CGCG 1 cut(s) 309
BstKTI GATC 2 cut(s) 327, 444
BstMAI GTCTC 1 cut(s) 22
BstMBI GATC 2 cut(s) 324, 441
BstUI CGCG 1 cut(s) 309
BstV2I GAAGAC 1 cut(s) 206
BstZ17I GTATAC 2 cut(s) 503, 550
BsuRI GGCC 1 cut(s) 332
BtgI CCRYGG 1 cut(s) 21
BtsCI GGATG 2 cut(s) 444, 594
BtsIMutI CAGTG 1 cut(s) 192
Cac8I GCNNGC 1 cut(s) 246
Cfr10I RCCGGY 2 cut(s) 179, 244
Cfr13I GGNCC 1 cut(s) 395
CpoI CGGWCCG 1 cut(s) 395
Csp6I GTAC 1 cut(s) 577
CspAI ACCGGT 1 cut(s) 179
CspI CGGWCCG 1 cut(s) 395
CviAII CATG 2 cut(s) 22, 449
CviJI RGCY 6 cut(s) 80, 244, 248, 332, 361, 526
CviKI_1 RGCY 6 cut(s) 80, 244, 248, 332, 361, 526
CviQI GTAC 1 cut(s) 577
DpnI GATC 2 cut(s) 326, 443
DpnII GATC 2 cut(s) 324, 441
Ecl136II GAGCTC 1 cut(s) 526
Eco130I CCWWGG 2 cut(s) 21, 216
Eco24I GRGCYC 1 cut(s) 528
Eco47I GGWCC 1 cut(s) 395
Eco53kI GAGCTC 1 cut(s) 526
Eco88I CYCGRG 1 cut(s) 128
EcoICRI GAGCTC 1 cut(s) 526
EcoNI CCTNNNNNAGG 1 cut(s) 153
EcoT14I CCWWGG 2 cut(s) 21, 216
EcoT38I GRGCYC 1 cut(s) 528
ErhI CCWWGG 2 cut(s) 21, 216
FaeI CATG 2 cut(s) 25, 452
FalI AAGNNNNNCTT 4 cut(s) 320, 352, 490, 522
FatI CATG 2 cut(s) 21, 448
FauI CCCGC 1 cut(s) 314
FbaI TGATCA 1 cut(s) 324
FblI GTMKAC 2 cut(s) 502, 549
FokI GGATG 2 cut(s) 431, 601
FriOI GRGCYC 1 cut(s) 528
HaeIII GGCC 1 cut(s) 332
HapII CCGG 3 cut(s) 93, 180, 245
Hin1II CATG 2 cut(s) 25, 452
HincII GTYRAC 1 cut(s) 370
HindII GTYRAC 1 cut(s) 370
HinfI GANTC 3 cut(s) 96, 131, 210
HpaII CCGG 3 cut(s) 93, 180, 245
HphI GGTGA 3 cut(s) 126, 295, 427
Hpy166II GTNNAC 4 cut(s) 6, 370, 503, 550
Hpy188I TCNGA 4 cut(s) 175, 324, 399, 530
Hpy188III TCNNGA 4 cut(s) 13, 128, 269, 586
Hpy8I GTNNAC 4 cut(s) 6, 370, 503, 550
Hpy99I CGWCG 1 cut(s) 615
HpyAV CCTTC 1 cut(s) 346
HpyCH4III ACNGT 2 cut(s) 10, 415
HpyCH4V TGCA 2 cut(s) 146, 472
Hsp92II CATG 2 cut(s) 25, 452
KroI GCCGGC 1 cut(s) 244
KroNI GCCGGC 1 cut(s) 246
Ksp22I TGATCA 1 cut(s) 324
Kzo9I GATC 2 cut(s) 324, 441
LmnI GCTCC 2 cut(s) 523, 531
LpnPI CCDG 8 cut(s) 106, 141, 180, 189, 193, 258, 282, 571
MaeIII GTNAC 4 cut(s) 43, 132, 301, 451
MalI GATC 2 cut(s) 326, 443
MboI GATC 2 cut(s) 324, 441
MboII GAAGA 2 cut(s) 211, 550
MhlI GDGCHC 1 cut(s) 528
MluCI AATT 6 cut(s) 316, 349, 400, 458, 463, 601
MlyI GAGTC 1 cut(s) 140
MmeI TCCRAC 1 cut(s) 553
MnlI CCTC 4 cut(s) 135, 159, 401, 430
MroNI GCCGGC 1 cut(s) 244
MseI TTAA 4 cut(s) 161, 185, 363, 486
MslI CAYNNNNRTG 2 cut(s) 53, 449
MspI CCGG 3 cut(s) 93, 180, 245
MvnI CGCG 1 cut(s) 309
NaeI GCCGGC 1 cut(s) 246
NcoI CCATGG 1 cut(s) 21
NdeII GATC 2 cut(s) 324, 441
NgoMIV GCCGGC 1 cut(s) 244
NlaIII CATG 2 cut(s) 25, 452
NmuCI GTSAC 3 cut(s) 132, 301, 451
NspV TTCGAA 1 cut(s) 225
PcsI WCGNNNNNNNCGW 1 cut(s) 231
PdiI GCCGGC 1 cut(s) 246
PfeI GAWTC 2 cut(s) 96, 210
PinAI ACCGGT 1 cut(s) 179
PleI GAGTC 1 cut(s) 139
PpsI GAGTC 1 cut(s) 139
PsiI TTATAA 1 cut(s) 512
Psp124BI GAGCTC 1 cut(s) 528
PspPI GGNCC 1 cut(s) 395
RsaI GTAC 1 cut(s) 578
RsaNI GTAC 1 cut(s) 577
RseI CAYNNNNRTG 2 cut(s) 53, 449
Rsr2I CGGWCCG 1 cut(s) 395
RsrII CGGWCCG 1 cut(s) 395
SacI GAGCTC 1 cut(s) 528
SaqAI TTAA 4 cut(s) 161, 185, 363, 486
Sau3AI GATC 2 cut(s) 324, 441
Sau96I GGNCC 1 cut(s) 395
ScaI AGTACT 1 cut(s) 578
SchI GAGTC 1 cut(s) 140
SduI GDGCHC 1 cut(s) 528
SfuI TTCGAA 1 cut(s) 225
SinI GGWCC 1 cut(s) 395
SmiMI CAYNNNNRTG 2 cut(s) 53, 449
Sse9I AATT 6 cut(s) 316, 349, 400, 458, 463, 601
SsiI CCGC 3 cut(s) 114, 307, 564
SstI GAGCTC 1 cut(s) 528
StyI CCWWGG 2 cut(s) 21, 216
TaaI ACNGT 2 cut(s) 10, 415
TaqI TCGA 2 cut(s) 225, 381
TaqII GACCGA 1 cut(s) 383
TasI AATT 6 cut(s) 316, 349, 400, 458, 463, 601
TatI WGTACW 1 cut(s) 576
TfiI GAWTC 2 cut(s) 96, 210
Tru1I TTAA 4 cut(s) 161, 185, 363, 486
Tru9I TTAA 4 cut(s) 161, 185, 363, 486
TscAI CASTG 1 cut(s) 199
TseFI GTSAC 3 cut(s) 132, 301, 451
Tsp45I GTSAC 3 cut(s) 132, 301, 451
TspDTI ATGAA 3 cut(s) 56, 88, 558
TspGWI ACGGA 1 cut(s) 288
TspRI CASTG 1 cut(s) 199
VpaK11BI GGWCC 1 cut(s) 395
XagI CCTNNNNNAGG 1 cut(s) 153
XapI RAATTY 2 cut(s) 400, 458
XmiI GTMKAC 2 cut(s) 502, 549
ZrmI AGTACT 1 cut(s) 578
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.