RchiOBHm_Chr2g0141191

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000083
Physical Location & Seq
Reverse (-)
58748006 .. 58752046
4041 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ51152

Sequence Viewer

Length: 2532 bp
ATGTCAGGGATTTTCAAGCAATTCCTGGCTCCACTGCTTGCTGGTTTTGCTCTTATGCTCTTAGTTCATGCGCAGGATCAAACAGGCTTCATCAGCATAGATTGCGGCCTTGCGGAGAATTCCACCTATTCTGAAAAGATAACAACCATCGACTACATTTCAGATGCAACCTTCATAGACACTGGTGAAAGAAAGTTGGTATTGCCTGAAAACAGAAACGGCTACCAACAACCTTACTGGTCTCTTAGGAGCTTTCCTCAAGGAACCAGGAACTGCTACAAAATAAATGTTAAAAGTGGCACCAGATACTTGATCAGAGCCAGTTTCTTTTATGGGAACTATGATGGAGAAAACAAATTGCCAGAGTTTGAACTACATCTTGGATCTAATTTGTGGGACTTGGTCAGTCTGGAAGATGCATCCAGTTCCACAAGCAAGGAGCTCATACATTTTGTCCCAGCTAAGAGAAGCTATCTACATGTTTGTGTTGTGGATACAGGCTCCGGGGTTCCATTTATATCAAAAATAGAACTGAGGCCTTTGCCATATACAACTTATCAAACAGAAACAGGGTCCTTAGGACTTTATGTGCGGCTTGACACTGGTCAATCACCATCGAATTATACAGAATATAGGTTTCCAGTTGATATTCATGATCGATTGTGGCATAACTATGCCCAAAGTGATTGGACACAAATTAGTACCTTATCCACCACATTCAAGTCTGCACCTGATAATGATTACAACCCACCATCTATTGTAATGCGTACAGCTGCCACACCGAAACTTGAAAGTGATAACTTGAGTTTCTACTGGCTGCCTACTGATCCAAGTGCAGAATTTTATTTATACATGCACTTTTCAGAAGTTGTAGAGCTCCAAGCCAACCAGTCTAGACAGCTTGATATTACTTGGAATGGAGAGCACTACTATGGGCCATTTGTTCCTAATTTCTTCGACACCACAACGGTTTTGAGTACTAAAGCTTTGACTGGAGGAAAATATAATTTTTCAATCTCAAACCCAGATGGGAACTCCGTCCTTCAACCCATCCTCAATGGAATCGAGATCTACCAGCTAAAAGAATTCTTACAAATAGAAACGAAACAAGAAGATGGTAAGTCATTCATCACTTGCCAAGCTCCGACTTCGTCCTATCAATTAATTGATGCAATCACAAACATTAAGTCAACCTATACCATTGAGAAGAATTGGCAAGGAGATCCATGTTCCCCCAAGAACTACTTATGGGAAGGTCTAAAATGTAGCTATCCTACAAATGAGTCCCCAAGAATCATATCATTGGATCTATCAAACAACAACTTAACAGGACCACTTCCAGATTTTTTGTCTCAGCTACCAAACTTAACCATCATAAACTTGGAGAACAACAAGCTCACAGGCTCAGTTCCAGTCGGACTTATTGAAAGAAGGAGGAATGGTTTACTATCATTAAGGTGTACTTTGTACAAAATTTTGTGTGGAAATCCAAATCTATCTGGAAATTCTTCTTGCAAAAAGAAGAAGAACAATTTCATTATACCCATAGTAGGATCCGTCGTTGGAATTTTTTGCCTCTTATCTGTAGCAGTAATCTGCTGGTGCTTGAAAAGAAAAAGAGAAGATGCTGCCATATATGAAAAACCCCACTTTCCGTCACTGGAACTGGAGCAAAAAAACCGACAGTTTACATACTGTGAGATCCTCAAGTTCACTAACAATTTGGAGAGGACTCTTGGAAAAGGTGGATTTGGAACAGTTTACCATGGATATATTGACAAACTTCAAGTAGCTGTTAATCTTCTTTTGAGAGTTCATCACACGAACTTGACAAGCCTTGTTGGATATTGCAATGATGAAAACAATATGGGGCTCGTCTATGAGTACATGGCCAATGGAAACTTACAAGAACATCTTTCAGGATTGGAGTATCTGCACTATGGTTGTAAGCCACCTATAATTCACAGGGATGTGAAATCAGCAAACATCTTGTTAACTGAGAACTTCCAAGCCAAAGTATCTGATTTTGGCCTATCCAGAAATTTCCCTACAGATGGTGGGACTCATATATCGACAGTTGTTGCTGGAACTCCCGGGTATCTTGACCCTGAGTACTACTTAACAAGCAGGTTAAACGAGAAAAGTGATACTTATAGCTTTGGGATTGTGCTGTTGGAGATTATCACAAGTCGACCTGTTATAACAGGAACGCTTGAGAGGATTCACATTAGCCAATGGGTTGGTTTCATGCTTGCGCAGGGTGACATTAACAGTATTGTTGATCCGAGATTAGAGAGAAATTTCAATGTCAACTCCGTCTGGAAAGTTGTGGAGATAGCAATGGCATGCGTGTCTCCAAACGCCACCAAAAGGCCAATGATGAGTCAGGTACTGATGGAACTGAAGGAGTGCATGGCTACGGAAGAACTGTCTCAGAAAAAGCAGATGGAATATGAAACTGAATTAGGAGAACCAGTTGAGATGGTGTCTCTAAATGATTCTATCAGAATGCTACGTCCATCAGTTAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

843

Amino Acids

95.28

Weight (kDa)

5.87

Isoelectric Point (pI)

43.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 33 - 359 2.6e-105 Malectin-like domain
PK_Tyr_Ser-Thr PF07714 598 - 801 1.1e-22 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 599 - 798 2.6e-24 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2201
Acc16I TGCGCA 2 cut(s) 72, 2256
Acc36I ACCTGC 1 cut(s) 2118
AccB1I GGYRCC 1 cut(s) 299
AccI GTMKAC 1 cut(s) 2191
AciI CCGC 3 cut(s) 105, 113, 592
AclWI GGATC 9 cut(s) 84, 391, 821, 1217, 1314, 1548, 1561, 1696, 2276
AcoI YGGCCR 1 cut(s) 1890
AcsI RAATTY 8 cut(s) 118, 839, 1085, 1473, 1504, 1566, 2041, 2299
AcuI CTGAAG 1 cut(s) 2423
AfaI GTAC 8 cut(s) 703, 769, 979, 1462, 1469, 1886, 2114, 2391
AfiI CCNNNNNNNGG 3 cut(s) 1550, 2054, 2370
AflIII ACRYGT 1 cut(s) 478
AjnI CCWGG 2 cut(s) 24, 266
AjuI GAANNNNNNNTTGG 2 cut(s) 363, 395
Alw21I GWGCWC 3 cut(s) 444, 879, 927
Alw26I GTCTC 5 cut(s) 246, 1356, 2358, 2436, 2493
AlwI GGATC 9 cut(s) 84, 391, 821, 1217, 1314, 1548, 1561, 1696, 2276
AlwNI CAGNNNCTG 2 cut(s) 273, 2392
Ama87I CYCGRG 1 cut(s) 2093
AoxI GGCC 6 cut(s) 106, 536, 935, 1890, 2029, 2372
ApeKI GCWGC 3 cut(s) 773, 817, 1628
ApoI RAATTY 8 cut(s) 118, 839, 1085, 1473, 1504, 1566, 2041, 2299
ArsI GACNNNNNNTTYG 2 cut(s) 1172, 1204
AseI ATTAAT 1 cut(s) 1163
Asp700I GAANNNNTTC 2 cut(s) 1507, 1532
AspLEI GCGC 2 cut(s) 73, 2257
AspS9I GGNCC 3 cut(s) 573, 935, 1331
AsuC2I CCSGG 3 cut(s) 505, 2094, 2095
AsuHPI GGTGA 3 cut(s) 197, 603, 2273
AvaI CYCGRG 1 cut(s) 2093
AvaII GGWCC 2 cut(s) 573, 1331
AxyI CCTNAGG 1 cut(s) 577
BalI TGGCCA 1 cut(s) 1892
BamHI GGATCC 1 cut(s) 1553
BanI GGYRCC 1 cut(s) 299
BanII GRGCYC 3 cut(s) 444, 879, 1875
Bbv12I GWGCWC 3 cut(s) 444, 879, 927
BbvI GCAGC 3 cut(s) 760, 804, 1615
BceAI ACGGC 1 cut(s) 235
BciT130I CCWGG 2 cut(s) 26, 268
BciVI GTATCC 1 cut(s) 487
BclI TGATCA 1 cut(s) 312
BcnI CCSGG 3 cut(s) 505, 2094, 2095
BcoDI GTCTC 5 cut(s) 246, 1356, 2358, 2436, 2493
BfaI CTAG 1 cut(s) 894
BfmI CTRYAG 2 cut(s) 1584, 2049
BfuAI ACCTGC 1 cut(s) 2118
BfuI GTATCC 1 cut(s) 487
BglII AGATCT 1 cut(s) 1068
BisI GCNGC 5 cut(s) 106, 593, 774, 818, 1629
BlsI GCNGC 5 cut(s) 107, 594, 775, 819, 1630
BmcAI AGTACT 2 cut(s) 979, 2114
Bme1390I CCNGG 5 cut(s) 26, 268, 505, 2094, 2095
Bme18I GGWCC 2 cut(s) 573, 1331
BmeT110I CYCGRG 1 cut(s) 2093
BmgT120I GGNCC 3 cut(s) 573, 935, 1331
BmiI GGNNCC 7 cut(s) 30, 265, 301, 502, 510, 574, 1555
BmrFI CCNGG 5 cut(s) 26, 268, 505, 2094, 2095
BmsI GCATC 5 cut(s) 154, 406, 428, 1159, 1615
BoxI GACNNNNGTC 1 cut(s) 603
BplI GAGNNNNNCTC 2 cut(s) 241, 273
BpmI CTGGAG 2 cut(s) 1014, 1688
BpuEI CTTGAG 4 cut(s) 243, 823, 1691, 2234
BpuMI CCSGG 3 cut(s) 505, 2094, 2095
Bsa29I ATCGAT 1 cut(s) 658
BsaI GGTCTC 1 cut(s) 246
BsaJI CCNNGG 3 cut(s) 504, 1765, 2093
BsaXI ACNNNNNCTCC 4 cut(s) 1426, 1456, 2460, 2490
Bsc4I CCNNNNNNNGG 3 cut(s) 1550, 2054, 2370
Bse21I CCTNAGG 1 cut(s) 577
Bse3DI GCAATG 2 cut(s) 1858, 2346
BseBI CCWGG 2 cut(s) 26, 268
BseCI ATCGAT 1 cut(s) 658
BseDI CCNNGG 3 cut(s) 504, 1765, 2093
BseGI GGATG 3 cut(s) 419, 1050, 1975
BseLI CCNNNNNNNGG 3 cut(s) 1550, 2054, 2370
BseMI GCAATG 2 cut(s) 1858, 2346
BseMII CTCAG 6 cut(s) 524, 1367, 1419, 1989, 2100, 2447
BseXI GCAGC 3 cut(s) 760, 804, 1615
BseYI CCCAGC 1 cut(s) 457
BsgI GTGCAG 3 cut(s) 711, 855, 1919
BshFI GGCC 6 cut(s) 108, 538, 937, 1892, 2031, 2374
BshNI GGYRCC 1 cut(s) 299
BshVI ATCGAT 1 cut(s) 658
BsiHKAI GWGCWC 3 cut(s) 444, 879, 927
BsiHKCI CYCGRG 1 cut(s) 2093
BsiSI CCGG 2 cut(s) 504, 2094
BslFI GGGAC 4 cut(s) 410, 440, 1270, 2074
BslI CCNNNNNNNGG 3 cut(s) 1550, 2054, 2370
BsmAI GTCTC 5 cut(s) 246, 1356, 2358, 2436, 2493
BsmFI GGGAC 4 cut(s) 410, 440, 1270, 2074
BsmI GAATGC 1 cut(s) 2514
BsnI GGCC 6 cut(s) 108, 538, 937, 1892, 2031, 2374
Bso31I GGTCTC 1 cut(s) 246
BsoBI CYCGRG 1 cut(s) 2093
Bsp1286I GDGCHC 4 cut(s) 444, 879, 927, 1875
Bsp1407I TGTACA 1 cut(s) 1467
Bsp19I CCATGG 1 cut(s) 1765
BspACI CCGC 3 cut(s) 105, 113, 592
BspANI GGCC 6 cut(s) 108, 538, 937, 1892, 2031, 2374
BspCNI CTCAG 6 cut(s) 525, 1366, 1418, 1990, 2101, 2446
BspDI ATCGAT 1 cut(s) 658
BspHI TCATGA 1 cut(s) 652
BspLI GGNNCC 7 cut(s) 30, 265, 301, 502, 510, 574, 1555
BspMI ACCTGC 1 cut(s) 2118
BspPI GGATC 9 cut(s) 84, 391, 821, 1217, 1314, 1548, 1561, 1696, 2276
BspT107I GGYRCC 1 cut(s) 299
BspTNI GGTCTC 1 cut(s) 246
BsrDI GCAATG 2 cut(s) 1858, 2346
BsrGI TGTACA 1 cut(s) 1467
BssECI CCNNGG 3 cut(s) 504, 1765, 2093
BssT1I CCWWGG 1 cut(s) 1765
Bst2UI CCWGG 2 cut(s) 26, 268
Bst4CI ACNGT 7 cut(s) 970, 1686, 1697, 1759, 2077, 2273, 2430
BstAPI GCANNNNNTGC 1 cut(s) 102
BstAUI TGTACA 1 cut(s) 1467
BstC8I GCNNGC 3 cut(s) 39, 2253, 2347
BstDSI CCRYGG 1 cut(s) 1765
BstF5I GGATG 3 cut(s) 419, 1050, 1975
BstHHI GCGC 2 cut(s) 73, 2257
BstMAI GTCTC 5 cut(s) 246, 1356, 2358, 2436, 2493
BstMWI GCNNNNNNNGC 3 cut(s) 47, 93, 102
BstNI CCWGG 2 cut(s) 26, 268
BstNSI RCATGY 3 cut(s) 482, 856, 2349
BstPAI GACNNNNGTC 1 cut(s) 603
BstSCI CCNGG 5 cut(s) 24, 266, 503, 2092, 2093
BstSFI CTRYAG 2 cut(s) 1584, 2049
BstV1I GCAGC 3 cut(s) 760, 804, 1615
BstX2I RGATCY 6 cut(s) 383, 1068, 1222, 1306, 1553, 1701
BstXI CCANNNNNNTGG 1 cut(s) 2240
BstYI RGATCY 6 cut(s) 383, 1068, 1222, 1306, 1553, 1701
Bsu15I ATCGAT 1 cut(s) 658
Bsu36I CCTNAGG 1 cut(s) 577
BsuI GTATCC 1 cut(s) 487
BsuRI GGCC 6 cut(s) 108, 538, 937, 1892, 2031, 2374
BsuTUI ATCGAT 1 cut(s) 658
BtgI CCRYGG 1 cut(s) 1765
BtsCI GGATG 3 cut(s) 419, 1050, 1975
BtsI GCAGTG 1 cut(s) 32
BtsIMutI CAGTG 4 cut(s) 32, 180, 600, 1658
BveI ACCTGC 1 cut(s) 2118
Cac8I GCNNGC 3 cut(s) 39, 2253, 2347
CaiI CAGNNNCTG 2 cut(s) 273, 2392
CciI TCATGA 1 cut(s) 652
CfoI GCGC 2 cut(s) 73, 2257
Cfr13I GGNCC 3 cut(s) 573, 935, 1331
Cfr9I CCCGGG 1 cut(s) 2093
ClaI ATCGAT 1 cut(s) 658
Csp6I GTAC 8 cut(s) 702, 768, 978, 1461, 1468, 1885, 2113, 2390
CviQI GTAC 8 cut(s) 702, 768, 978, 1461, 1468, 1885, 2113, 2390
EaeI YGGCCR 1 cut(s) 1890
Ecl136II GAGCTC 2 cut(s) 442, 877
Eco130I CCWWGG 1 cut(s) 1765
Eco147I AGGCCT 1 cut(s) 538
Eco24I GRGCYC 3 cut(s) 444, 879, 1875
Eco31I GGTCTC 1 cut(s) 246
Eco47I GGWCC 2 cut(s) 573, 1331
Eco53kI GAGCTC 2 cut(s) 442, 877
Eco57I CTGAAG 1 cut(s) 2423
Eco81I CCTNAGG 1 cut(s) 577
Eco88I CYCGRG 1 cut(s) 2093
EcoICRI GAGCTC 2 cut(s) 442, 877
EcoO109I RGGNCCY 1 cut(s) 573
EcoRI GAATTC 2 cut(s) 118, 1085
EcoRII CCWGG 2 cut(s) 24, 266
EcoT14I CCWWGG 1 cut(s) 1765
EcoT22I ATGCAT 1 cut(s) 421
EcoT38I GRGCYC 3 cut(s) 444, 879, 1875
ErhI CCWWGG 1 cut(s) 1765
FalI AAGNNNNNCTT 8 cut(s) 1229, 1261, 1447, 1479, 1899, 1931, 2134, 2166
FaqI GGGAC 4 cut(s) 410, 440, 1270, 2074
FbaI TGATCA 1 cut(s) 312
FblI GTMKAC 1 cut(s) 2191
Fnu4HI GCNGC 5 cut(s) 106, 593, 774, 818, 1629
FokI GGATG 3 cut(s) 406, 1037, 1982
FriOI GRGCYC 3 cut(s) 444, 879, 1875
Fsp4HI GCNGC 5 cut(s) 106, 593, 774, 818, 1629
FspBI CTAG 1 cut(s) 894
FspI TGCGCA 2 cut(s) 72, 2256
GlaI GCGC 2 cut(s) 72, 2256
GluI GCNGC 5 cut(s) 106, 593, 774, 818, 1629
GsaI CCCAGC 1 cut(s) 461
GsuI CTGGAG 2 cut(s) 1014, 1688
HaeIII GGCC 6 cut(s) 108, 538, 937, 1892, 2031, 2374
HapII CCGG 2 cut(s) 504, 2094
HhaI GCGC 2 cut(s) 73, 2257
Hin6I GCGC 2 cut(s) 71, 2255
HinP1I GCGC 2 cut(s) 71, 2255
HincII GTYRAC 4 cut(s) 1191, 1995, 2192, 2311
HindII GTYRAC 4 cut(s) 1191, 1995, 2192, 2311
HindIII AAGCTT 1 cut(s) 984
HinfI GANTC 8 cut(s) 1062, 1283, 1293, 1732, 2062, 2221, 2383, 2498
HpaI GTTAAC 1 cut(s) 1995
HpaII CCGG 2 cut(s) 504, 2094
HphI GGTGA 3 cut(s) 197, 603, 2273
Hpy166II GTNNAC 9 cut(s) 1191, 1445, 1461, 1689, 1713, 1762, 1995, 2192, 2311
Hpy8I GTNNAC 9 cut(s) 1191, 1445, 1461, 1689, 1713, 1762, 1995, 2192, 2311
Hpy99I CGWCG 1 cut(s) 1562
HpyAV CCTTC 5 cut(s) 181, 1052, 1247, 1425, 2398
HpyCH4III ACNGT 7 cut(s) 970, 1686, 1697, 1759, 2077, 2273, 2430
HpyCH4IV ACGT 1 cut(s) 2515
HpyF10VI GCNNNNNNNGC 3 cut(s) 47, 93, 102
HpySE526I ACGT 1 cut(s) 2515
HspAI GCGC 2 cut(s) 71, 2255
Ksp22I TGATCA 1 cut(s) 312
KspAI GTTAAC 1 cut(s) 1995
LmnI GCTCC 7 cut(s) 34, 249, 439, 506, 882, 1147, 1669
Lsp1109I GCAGC 3 cut(s) 760, 804, 1615
LweI GCATC 5 cut(s) 154, 406, 428, 1159, 1615
MaeI CTAG 1 cut(s) 894
MaeII ACGT 1 cut(s) 2515
MaeIII GTNAC 2 cut(s) 1656, 2261
MflI RGATCY 6 cut(s) 383, 1068, 1222, 1306, 1553, 1701
MhlI GDGCHC 4 cut(s) 444, 879, 927, 1875
MlsI TGGCCA 1 cut(s) 1892
MluNI TGGCCA 1 cut(s) 1892
MlyI GAGTC 4 cut(s) 1292, 1726, 2056, 2392
MmeI TCCRAC 5 cut(s) 1169, 1396, 1543, 1822, 2154
MnlI CCTC 9 cut(s) 267, 528, 989, 1064, 1428, 1586, 1715, 1722, 2211
Mox20I TGGCCA 1 cut(s) 1892
Mph1103I ATGCAT 1 cut(s) 421
MroXI GAANNNNTTC 2 cut(s) 1507, 1532
MscI TGGCCA 1 cut(s) 1892
MslI CAYNNNNRTG 5 cut(s) 483, 672, 930, 1456, 1968
Msp20I TGGCCA 1 cut(s) 1892
MspA1I CMGCKG 1 cut(s) 773
MspI CCGG 2 cut(s) 504, 2094
MspR9I CCNGG 5 cut(s) 26, 268, 505, 2094, 2095
Mva1269I GAATGC 1 cut(s) 2514
MvaI CCWGG 2 cut(s) 26, 268
MwoI GCNNNNNNNGC 3 cut(s) 47, 93, 102
NciI CCSGG 3 cut(s) 505, 2094, 2095
NcoI CCATGG 1 cut(s) 1765
NlaIV GGNNCC 7 cut(s) 30, 265, 301, 502, 510, 574, 1555
NmuCI GTSAC 2 cut(s) 1656, 2261
NsbI TGCGCA 2 cut(s) 72, 2256
NsiI ATGCAT 1 cut(s) 421
NspI RCATGY 3 cut(s) 482, 856, 2349
PaeI GCATGC 1 cut(s) 2349
PagI TCATGA 1 cut(s) 652
PceI AGGCCT 1 cut(s) 538
PciI ACATGT 1 cut(s) 478
PctI GAATGC 1 cut(s) 2514
PdmI GAANNNNTTC 2 cut(s) 1507, 1532
PfeI GAWTC 4 cut(s) 1062, 1293, 2221, 2498
PflFI GACNNNGTC 2 cut(s) 401, 1150
PkrI GCNGC 5 cut(s) 107, 594, 775, 819, 1630
PleI GAGTC 4 cut(s) 1291, 1726, 2056, 2391
PpsI GAGTC 4 cut(s) 1291, 1726, 2056, 2391
PpuMI RGGWCCY 1 cut(s) 573
PscI ACATGT 1 cut(s) 478
PshAI GACNNNNGTC 1 cut(s) 603
PshBI ATTAAT 1 cut(s) 1163
PsiI TTATAA 1 cut(s) 2201
Psp124BI GAGCTC 2 cut(s) 444, 879
Psp5II RGGWCCY 1 cut(s) 573
Psp6I CCWGG 2 cut(s) 24, 266
PspFI CCCAGC 1 cut(s) 457
PspGI CCWGG 2 cut(s) 24, 266
PspN4I GGNNCC 7 cut(s) 30, 265, 301, 502, 510, 574, 1555
PspPI GGNCC 3 cut(s) 573, 935, 1331
PspPPI RGGWCCY 1 cut(s) 573
PstNI CAGNNNCTG 2 cut(s) 273, 2392
PsuI RGATCY 6 cut(s) 383, 1068, 1222, 1306, 1553, 1701
PsyI GACNNNGTC 2 cut(s) 401, 1150
PvuII CAGCTG 1 cut(s) 773
RsaI GTAC 8 cut(s) 703, 769, 979, 1462, 1469, 1886, 2114, 2391
RsaNI GTAC 8 cut(s) 702, 768, 978, 1461, 1468, 1885, 2113, 2390
RseI CAYNNNNRTG 5 cut(s) 483, 672, 930, 1456, 1968
SacI GAGCTC 2 cut(s) 444, 879
SalI GTCGAC 1 cut(s) 2190
SatI GCNGC 5 cut(s) 106, 593, 774, 818, 1629
Sau96I GGNCC 3 cut(s) 573, 935, 1331
ScaI AGTACT 2 cut(s) 979, 2114
SchI GAGTC 4 cut(s) 1292, 1726, 2056, 2392
ScrFI CCNGG 5 cut(s) 26, 268, 505, 2094, 2095
SduI GDGCHC 4 cut(s) 444, 879, 927, 1875
SfaNI GCATC 5 cut(s) 154, 406, 428, 1159, 1615
SfcI CTRYAG 2 cut(s) 1584, 2049
SinI GGWCC 2 cut(s) 573, 1331
SmaI CCCGGG 1 cut(s) 2095
SmiMI CAYNNNNRTG 5 cut(s) 483, 672, 930, 1456, 1968
SmlI CTYRAG 4 cut(s) 258, 802, 1706, 2213
SmoI CTYRAG 4 cut(s) 258, 802, 1706, 2213
SphI GCATGC 1 cut(s) 2349
SseBI AGGCCT 1 cut(s) 538
SsiI CCGC 3 cut(s) 105, 113, 592
SspMI CTAG 1 cut(s) 894
SstI GAGCTC 2 cut(s) 444, 879
StuI AGGCCT 1 cut(s) 538
StyD4I CCNGG 5 cut(s) 24, 266, 503, 2092, 2093
StyI CCWWGG 1 cut(s) 1765
TaaI ACNGT 7 cut(s) 970, 1686, 1697, 1759, 2077, 2273, 2430
TaiI ACGT 1 cut(s) 2518
TaqI TCGA 7 cut(s) 150, 617, 658, 957, 1065, 2072, 2191
TatI WGTACW 5 cut(s) 977, 1460, 1467, 1884, 2112
TauI GCSGC 2 cut(s) 108, 595
TfiI GAWTC 4 cut(s) 1062, 1293, 2221, 2498
TscAI CASTG 4 cut(s) 39, 187, 607, 1665
TseFI GTSAC 2 cut(s) 1656, 2261
TseI GCWGC 3 cut(s) 773, 817, 1628
Tsp45I GTSAC 2 cut(s) 1656, 2261
TspGWI ACGGA 5 cut(s) 1027, 1546, 1644, 2305, 2435
TspMI CCCGGG 1 cut(s) 2093
TspRI CASTG 4 cut(s) 39, 187, 607, 1665
Tth111I GACNNNGTC 2 cut(s) 401, 1150
VpaK11BI GGWCC 2 cut(s) 573, 1331
VspI ATTAAT 1 cut(s) 1163
XapI RAATTY 8 cut(s) 118, 839, 1085, 1473, 1504, 1566, 2041, 2299
XbaI TCTAGA 1 cut(s) 893
XceI RCATGY 3 cut(s) 482, 856, 2349
XcmI CCANNNNNNNNNTGG 1 cut(s) 1378
XmaI CCCGGG 1 cut(s) 2093
XmiI GTMKAC 1 cut(s) 2191
XmnI GAANNNNTTC 2 cut(s) 1507, 1532
XspI CTAG 1 cut(s) 894
ZrmI AGTACT 2 cut(s) 979, 2114
Zsp2I ATGCAT 1 cut(s) 421
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.