RLG00000019930

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
58737828 .. 58738394
567 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019930

Sequence Viewer

Length: 567 bp
ATGATCGGATCAGGCTTCATTAGCTTAGACTGTGGGCTACCAGCAAATTCAAGCTACTCTGACCCGATAAACCAGATTTACTACATGTCAGATGAACCCTTCATTGATACTGGTGTAACTAGACGCATAGCGCCTGAATATGAAGTTGTCCATCATAAGCAAATAGCTCATGTCCGAAGCTTTCCTCAAGGGATCAGGAACTGTTACAGAGTGAACATTACAAGTGGTACCAAGTATTTGATTAGAGCAACTTTTGTGTATGGGAATTATGATGGCCTTAATCAGTTGCCAAAGTTTGATCTGCACCTGGGACCTAATTTCTGGGATTCATTGACACTTGATGGCGTATCCTTGAGTACCATGAAAGAAGTCATACATATTTCTTCGTTAAACTACATTCATATCTGCCTCGTGAACACAGGGTCTGGAACACCATTCATTTCATCATTGGAATTAAGGACTTTGAAAAACACAATTTACACAACCAAAGGTGGTTCATTGGCACTCAAGTTTCGCCTAGATTTTGCTTCTACAATCAATGAATCATCCAGGTCAGTTCATTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

189

Amino Acids

21.05

Weight (kDa)

7.77

Isoelectric Point (pI)

45.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 9 - 179 2.7e-68 Malectin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 227
AccB1I GGYRCC 1 cut(s) 227
AclWI GGATC 2 cut(s) 16, 200
AcsI RAATTY 1 cut(s) 46
AfaI GTAC 2 cut(s) 229, 358
AflIII ACRYGT 1 cut(s) 84
AgsI TTSAA 2 cut(s) 51, 466
AjnI CCWGG 2 cut(s) 306, 548
AluBI AGCT 4 cut(s) 24, 54, 167, 180
AluI AGCT 4 cut(s) 24, 54, 167, 180
AlwI GGATC 2 cut(s) 16, 200
AlwNI CAGNNNCTG 2 cut(s) 201, 425
AoxI GGCC 1 cut(s) 274
ApoI RAATTY 1 cut(s) 46
Asp718I GGTACC 1 cut(s) 227
AspLEI GCGC 1 cut(s) 133
AspS9I GGNCC 1 cut(s) 311
AvaII GGWCC 1 cut(s) 311
BaeI ACNNNNGTAYC 2 cut(s) 99, 132
BanI GGYRCC 1 cut(s) 227
BauI CACGAG 1 cut(s) 410
BccI CCATC 3 cut(s) 159, 266, 335
BciT130I CCWGG 2 cut(s) 308, 550
BciVI GTATCC 1 cut(s) 358
BfaI CTAG 2 cut(s) 120, 518
BfoI RGCGCY 1 cut(s) 134
BfuI GTATCC 1 cut(s) 358
Bme1390I CCNGG 2 cut(s) 308, 550
Bme18I GGWCC 1 cut(s) 311
BmgT120I GGNCC 1 cut(s) 311
BmiI GGNNCC 2 cut(s) 229, 312
BmrFI CCNGG 2 cut(s) 308, 550
BpuEI CTTGAG 3 cut(s) 171, 373, 491
BsaJI CCNNGG 1 cut(s) 307
Bse1I ACTGG 1 cut(s) 115
BseBI CCWGG 2 cut(s) 308, 550
BseDI CCNNGG 1 cut(s) 307
BseGI GGATG 1 cut(s) 545
BseNI ACTGG 1 cut(s) 115
BsgI GTGCAG 1 cut(s) 287
BshFI GGCC 1 cut(s) 276
BshNI GGYRCC 1 cut(s) 227
BslFI GGGAC 1 cut(s) 324
BsmFI GGGAC 1 cut(s) 324
BsnI GGCC 1 cut(s) 276
Bsp143I GATC 4 cut(s) 3, 8, 192, 298
BspANI GGCC 1 cut(s) 276
BspLI GGNNCC 2 cut(s) 229, 312
BspPI GGATC 2 cut(s) 16, 200
BspT107I GGYRCC 1 cut(s) 227
BsrI ACTGG 1 cut(s) 115
BssECI CCNNGG 1 cut(s) 307
BssMI GATC 4 cut(s) 3, 8, 192, 298
BssSI CACGAG 1 cut(s) 410
Bst2BI CACGAG 1 cut(s) 410
Bst2UI CCWGG 2 cut(s) 308, 550
Bst4CI ACNGT 2 cut(s) 32, 203
BstDEI CTNAG 1 cut(s) 25
BstF5I GGATG 1 cut(s) 545
BstH2I RGCGCY 1 cut(s) 134
BstHHI GCGC 1 cut(s) 133
BstKTI GATC 4 cut(s) 6, 11, 195, 301
BstMBI GATC 4 cut(s) 3, 8, 192, 298
BstMWI GCNNNNNNNGC 1 cut(s) 21
BstNI CCWGG 2 cut(s) 308, 550
BstNSI RCATGY 1 cut(s) 88
BstSCI CCNGG 2 cut(s) 306, 548
BsuI GTATCC 1 cut(s) 358
BsuRI GGCC 1 cut(s) 276
BtsCI GGATG 1 cut(s) 545
CaiI CAGNNNCTG 2 cut(s) 201, 425
CfoI GCGC 1 cut(s) 133
Cfr13I GGNCC 1 cut(s) 311
CseI GACGC 1 cut(s) 132
Csp6I GTAC 2 cut(s) 228, 357
CviAII CATG 3 cut(s) 85, 170, 361
CviJI RGCY 7 cut(s) 15, 24, 37, 54, 167, 180, 276
CviKI_1 RGCY 7 cut(s) 15, 24, 37, 54, 167, 180, 276
CviQI GTAC 2 cut(s) 228, 357
DdeI CTNAG 1 cut(s) 25
DpnI GATC 4 cut(s) 5, 10, 194, 300
DpnII GATC 4 cut(s) 3, 8, 192, 298
Eco47I GGWCC 1 cut(s) 311
EcoO109I RGGNCCY 1 cut(s) 311
EcoRII CCWGG 2 cut(s) 306, 548
FaeI CATG 3 cut(s) 88, 173, 364
FaqI GGGAC 1 cut(s) 324
FatI CATG 3 cut(s) 84, 169, 360
FokI GGATG 1 cut(s) 532
FspBI CTAG 2 cut(s) 120, 518
GlaI GCGC 1 cut(s) 132
HaeII RGCGCY 1 cut(s) 134
HaeIII GGCC 1 cut(s) 276
HgaI GACGC 1 cut(s) 132
HhaI GCGC 1 cut(s) 133
Hin1II CATG 3 cut(s) 88, 173, 364
Hin6I GCGC 1 cut(s) 131
HinP1I GCGC 1 cut(s) 131
HindIII AAGCTT 1 cut(s) 178
HinfI GANTC 2 cut(s) 326, 542
Hpy166II GTNNAC 2 cut(s) 214, 415
Hpy188I TCNGA 5 cut(s) 8, 61, 91, 176, 566
Hpy188III TCNNGA 3 cut(s) 196, 412, 426
Hpy8I GTNNAC 2 cut(s) 214, 415
HpyAV CCTTC 1 cut(s) 109
HpyCH4III ACNGT 2 cut(s) 32, 203
HpyCH4V TGCA 1 cut(s) 304
HpyF10VI GCNNNNNNNGC 1 cut(s) 21
HpyF3I CTNAG 1 cut(s) 25
Hsp92II CATG 3 cut(s) 88, 173, 364
HspAI GCGC 1 cut(s) 131
KpnI GGTACC 1 cut(s) 231
Kzo9I GATC 4 cut(s) 3, 8, 192, 298
MaeI CTAG 2 cut(s) 120, 518
MaeIII GTNAC 2 cut(s) 115, 203
MalI GATC 4 cut(s) 5, 10, 194, 300
MboI GATC 4 cut(s) 3, 8, 192, 298
MboII GAAGA 1 cut(s) 375
MluCI AATT 5 cut(s) 46, 265, 316, 452, 474
MnlI CCTC 2 cut(s) 195, 419
MseI TTAA 3 cut(s) 279, 389, 455
MspR9I CCNGG 2 cut(s) 308, 550
MvaI CCWGG 2 cut(s) 308, 550
MwoI GCNNNNNNNGC 1 cut(s) 21
NdeII GATC 4 cut(s) 3, 8, 192, 298
NlaIII CATG 3 cut(s) 88, 173, 364
NlaIV GGNNCC 2 cut(s) 229, 312
NspI RCATGY 1 cut(s) 88
PciI ACATGT 1 cut(s) 84
PfeI GAWTC 2 cut(s) 326, 542
PpuMI RGGWCCY 1 cut(s) 311
PscI ACATGT 1 cut(s) 84
Psp5II RGGWCCY 1 cut(s) 311
Psp6I CCWGG 2 cut(s) 306, 548
PspGI CCWGG 2 cut(s) 306, 548
PspN4I GGNNCC 2 cut(s) 229, 312
PspPI GGNCC 1 cut(s) 311
PspPPI RGGWCCY 1 cut(s) 311
PstNI CAGNNNCTG 2 cut(s) 201, 425
RsaI GTAC 2 cut(s) 229, 358
RsaNI GTAC 2 cut(s) 228, 357
SaqAI TTAA 3 cut(s) 279, 389, 455
Sau3AI GATC 4 cut(s) 3, 8, 192, 298
Sau96I GGNCC 1 cut(s) 311
ScrFI CCNGG 2 cut(s) 308, 550
SetI ASST 8 cut(s) 26, 56, 169, 182, 309, 316, 493, 554
SinI GGWCC 1 cut(s) 311
SmlI CTYRAG 3 cut(s) 186, 352, 506
SmoI CTYRAG 3 cut(s) 186, 352, 506
Sse9I AATT 5 cut(s) 46, 265, 316, 452, 474
SspMI CTAG 2 cut(s) 120, 518
StyD4I CCNGG 2 cut(s) 306, 548
TaaI ACNGT 2 cut(s) 32, 203
TasI AATT 5 cut(s) 46, 265, 316, 452, 474
TfiI GAWTC 2 cut(s) 326, 542
Tru1I TTAA 3 cut(s) 279, 389, 455
Tru9I TTAA 3 cut(s) 279, 389, 455
VpaK11BI GGWCC 1 cut(s) 311
XapI RAATTY 1 cut(s) 46
XceI RCATGY 1 cut(s) 88
XspI CTAG 2 cut(s) 120, 518
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.