Rroxscaffold_2G00104120

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
27233341 .. 27234074
734 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00104120.1

Sequence Viewer

Length: 639 bp
ATGTCAGGGATTTTCAAGCAATTCCTGGTTCCACTGCTTGCTGGTTTTGCTCTTATGCTCTTAGTTCATGCGCAGGATCAAACAGGCTTCATCAGCATAGATTGCGGCCTTGAGGAGAATTCCACTTATTCTGAAAAGAAAACAACCATCGACTACATTTCAGATGCAACCTTCATAGACACTGGTGAAAGAAAGTTGGTATTGCCTGAAAACAGAAACGGCTACCAACAGCCTTACTGGTCTCTTAGGAGCTTTCCTCAAGGAACCAGGAACTGCTACAAAATAAATGTTAAAAGTGGCACCAGATACTTGATCAGAGCCAGTTTCTTTTATGGGAACTATGATGGAGAAAACAAATTGCCAGAGTTTGAACTACATCTTGGATCTAATTTGTGGGACTTGGTCAGTCTGGAAGATGCATCCAGTTCCACAAGCATGGAGCTCATACATTATGTCCCAGCTAAGAGAAGCTATCTACATGTTTGTGTTGTGGATACAGGCTCCGGGGTTCCATTTATATCAACAATAGAACTGAGGCCTTTGCCATATACAACTTATCAAACACAAACAGGGTCCTTGTCACTTTACACACGACTTGACACTGGTCAAATAGCACCTAATCTAACTGCATATAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

212

Amino Acids

23.94

Weight (kDa)

5.8

Isoelectric Point (pI)

38.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 33 - 203 4e-63 Malectin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 72
AccB1I GGYRCC 1 cut(s) 299
AciI CCGC 1 cut(s) 105
AclWI GGATC 2 cut(s) 84, 391
AcsI RAATTY 1 cut(s) 118
AflIII ACRYGT 1 cut(s) 478
AgsI TTSAA 2 cut(s) 16, 371
AjnI CCWGG 2 cut(s) 24, 266
AjuI GAANNNNNNNTTGG 2 cut(s) 363, 395
AluBI AGCT 4 cut(s) 252, 442, 461, 471
AluI AGCT 4 cut(s) 252, 442, 461, 471
Alw21I GWGCWC 1 cut(s) 444
Alw26I GTCTC 1 cut(s) 246
AlwI GGATC 2 cut(s) 84, 391
AlwNI CAGNNNCTG 1 cut(s) 273
AoxI GGCC 2 cut(s) 106, 536
ApoI RAATTY 1 cut(s) 118
AspLEI GCGC 1 cut(s) 73
AspS9I GGNCC 1 cut(s) 573
AsuC2I CCSGG 1 cut(s) 505
AsuHPI GGTGA 1 cut(s) 197
AvaII GGWCC 1 cut(s) 573
BanI GGYRCC 1 cut(s) 299
BanII GRGCYC 1 cut(s) 444
Bbv12I GWGCWC 1 cut(s) 444
BccI CCATC 2 cut(s) 155, 338
BceAI ACGGC 1 cut(s) 235
BciT130I CCWGG 2 cut(s) 26, 268
BciVI GTATCC 1 cut(s) 487
BclI TGATCA 1 cut(s) 312
BcnI CCSGG 1 cut(s) 505
BcoDI GTCTC 1 cut(s) 246
BfuI GTATCC 1 cut(s) 487
BisI GCNGC 1 cut(s) 106
BlsI GCNGC 1 cut(s) 107
Bme1390I CCNGG 3 cut(s) 26, 268, 505
Bme18I GGWCC 1 cut(s) 573
BmgT120I GGNCC 1 cut(s) 573
BmiI GGNNCC 6 cut(s) 30, 265, 301, 502, 510, 574
BmrFI CCNGG 3 cut(s) 26, 268, 505
BmsI GCATC 3 cut(s) 154, 406, 428
BoxI GACNNNNGTC 1 cut(s) 603
BplI GAGNNNNNCTC 2 cut(s) 241, 273
BpuEI CTTGAG 2 cut(s) 131, 243
BpuMI CCSGG 1 cut(s) 505
BsaI GGTCTC 1 cut(s) 246
BsaJI CCNNGG 1 cut(s) 504
Bse1I ACTGG 5 cut(s) 187, 242, 321, 423, 607
BseBI CCWGG 2 cut(s) 26, 268
BseDI CCNNGG 1 cut(s) 504
BseGI GGATG 1 cut(s) 419
BseMII CTCAG 1 cut(s) 524
BseNI ACTGG 5 cut(s) 187, 242, 321, 423, 607
BseRI GAGGAG 1 cut(s) 128
BseYI CCCAGC 1 cut(s) 457
BshFI GGCC 2 cut(s) 108, 538
BshNI GGYRCC 1 cut(s) 299
BsiHKAI GWGCWC 1 cut(s) 444
BsiSI CCGG 1 cut(s) 504
BslFI GGGAC 2 cut(s) 410, 440
BsmAI GTCTC 1 cut(s) 246
BsmFI GGGAC 2 cut(s) 410, 440
BsnI GGCC 2 cut(s) 108, 538
Bso31I GGTCTC 1 cut(s) 246
Bsp1286I GDGCHC 1 cut(s) 444
Bsp143I GATC 3 cut(s) 76, 312, 383
BspACI CCGC 1 cut(s) 105
BspANI GGCC 2 cut(s) 108, 538
BspCNI CTCAG 1 cut(s) 525
BspLI GGNNCC 6 cut(s) 30, 265, 301, 502, 510, 574
BspPI GGATC 2 cut(s) 84, 391
BspT107I GGYRCC 1 cut(s) 299
BspTNI GGTCTC 1 cut(s) 246
BsrI ACTGG 5 cut(s) 187, 242, 321, 423, 607
BssECI CCNNGG 1 cut(s) 504
BssMI GATC 3 cut(s) 76, 312, 383
Bst2UI CCWGG 2 cut(s) 26, 268
BstAPI GCANNNNNTGC 1 cut(s) 102
BstC8I GCNNGC 1 cut(s) 39
BstDEI CTNAG 4 cut(s) 61, 245, 462, 533
BstF5I GGATG 1 cut(s) 419
BstHHI GCGC 1 cut(s) 73
BstKTI GATC 3 cut(s) 79, 315, 386
BstMAI GTCTC 1 cut(s) 246
BstMBI GATC 3 cut(s) 76, 312, 383
BstMWI GCNNNNNNNGC 3 cut(s) 47, 93, 102
BstNI CCWGG 2 cut(s) 26, 268
BstNSI RCATGY 1 cut(s) 482
BstPAI GACNNNNGTC 1 cut(s) 603
BstSCI CCNGG 3 cut(s) 24, 266, 503
BstX2I RGATCY 1 cut(s) 383
BstXI CCANNNNNNTGG 1 cut(s) 436
BstYI RGATCY 1 cut(s) 383
BsuI GTATCC 1 cut(s) 487
BsuRI GGCC 2 cut(s) 108, 538
BtsCI GGATG 1 cut(s) 419
BtsI GCAGTG 1 cut(s) 32
BtsIMutI CAGTG 3 cut(s) 32, 180, 600
Cac8I GCNNGC 1 cut(s) 39
CaiI CAGNNNCTG 1 cut(s) 273
CfoI GCGC 1 cut(s) 73
Cfr13I GGNCC 1 cut(s) 573
CviAII CATG 3 cut(s) 68, 436, 479
DdeI CTNAG 4 cut(s) 61, 245, 462, 533
DpnI GATC 3 cut(s) 78, 314, 385
DpnII GATC 3 cut(s) 76, 312, 383
Ecl136II GAGCTC 1 cut(s) 442
Eco147I AGGCCT 1 cut(s) 538
Eco24I GRGCYC 1 cut(s) 444
Eco31I GGTCTC 1 cut(s) 246
Eco47I GGWCC 1 cut(s) 573
Eco53kI GAGCTC 1 cut(s) 442
EcoICRI GAGCTC 1 cut(s) 442
EcoO109I RGGNCCY 1 cut(s) 573
EcoRI GAATTC 1 cut(s) 118
EcoRII CCWGG 2 cut(s) 24, 266
EcoT22I ATGCAT 1 cut(s) 421
EcoT38I GRGCYC 1 cut(s) 444
FaeI CATG 3 cut(s) 71, 439, 482
FaqI GGGAC 2 cut(s) 410, 440
FatI CATG 3 cut(s) 67, 435, 478
FbaI TGATCA 1 cut(s) 312
Fnu4HI GCNGC 1 cut(s) 106
FokI GGATG 1 cut(s) 406
FriOI GRGCYC 1 cut(s) 444
Fsp4HI GCNGC 1 cut(s) 106
FspI TGCGCA 1 cut(s) 72
GlaI GCGC 1 cut(s) 72
GluI GCNGC 1 cut(s) 106
GsaI CCCAGC 1 cut(s) 461
HaeIII GGCC 2 cut(s) 108, 538
HapII CCGG 1 cut(s) 504
HhaI GCGC 1 cut(s) 73
Hin1II CATG 3 cut(s) 71, 439, 482
Hin6I GCGC 1 cut(s) 71
HinP1I GCGC 1 cut(s) 71
HpaII CCGG 1 cut(s) 504
HphI GGTGA 1 cut(s) 197
Hpy188I TCNGA 3 cut(s) 133, 163, 317
Hpy188III TCNNGA 1 cut(s) 410
HpyAV CCTTC 1 cut(s) 181
HpyCH4V TGCA 3 cut(s) 167, 419, 629
HpyF10VI GCNNNNNNNGC 3 cut(s) 47, 93, 102
HpyF3I CTNAG 4 cut(s) 61, 245, 462, 533
Hsp92II CATG 3 cut(s) 71, 439, 482
HspAI GCGC 1 cut(s) 71
Ksp22I TGATCA 1 cut(s) 312
Kzo9I GATC 3 cut(s) 76, 312, 383
LmnI GCTCC 3 cut(s) 249, 439, 506
LweI GCATC 3 cut(s) 154, 406, 428
MaeIII GTNAC 1 cut(s) 579
MalI GATC 3 cut(s) 78, 314, 385
MboI GATC 3 cut(s) 76, 312, 383
MboII GAAGA 1 cut(s) 425
MflI RGATCY 1 cut(s) 383
MhlI GDGCHC 1 cut(s) 444
MluCI AATT 4 cut(s) 20, 118, 356, 388
MnlI CCTC 3 cut(s) 106, 267, 528
Mph1103I ATGCAT 1 cut(s) 421
MseI TTAA 1 cut(s) 291
MslI CAYNNNNRTG 2 cut(s) 434, 483
MspI CCGG 1 cut(s) 504
MspR9I CCNGG 3 cut(s) 26, 268, 505
MvaI CCWGG 2 cut(s) 26, 268
MwoI GCNNNNNNNGC 3 cut(s) 47, 93, 102
NciI CCSGG 1 cut(s) 505
NdeII GATC 3 cut(s) 76, 312, 383
NlaIII CATG 3 cut(s) 71, 439, 482
NlaIV GGNNCC 6 cut(s) 30, 265, 301, 502, 510, 574
NmuCI GTSAC 1 cut(s) 579
NsbI TGCGCA 1 cut(s) 72
NsiI ATGCAT 1 cut(s) 421
NspI RCATGY 1 cut(s) 482
PceI AGGCCT 1 cut(s) 538
PciI ACATGT 1 cut(s) 478
PflFI GACNNNGTC 1 cut(s) 401
PkrI GCNGC 1 cut(s) 107
PpuMI RGGWCCY 1 cut(s) 573
PscI ACATGT 1 cut(s) 478
PshAI GACNNNNGTC 1 cut(s) 603
Psp124BI GAGCTC 1 cut(s) 444
Psp5II RGGWCCY 1 cut(s) 573
Psp6I CCWGG 2 cut(s) 24, 266
PspFI CCCAGC 1 cut(s) 457
PspGI CCWGG 2 cut(s) 24, 266
PspN4I GGNNCC 6 cut(s) 30, 265, 301, 502, 510, 574
PspPI GGNCC 1 cut(s) 573
PspPPI RGGWCCY 1 cut(s) 573
PstNI CAGNNNCTG 1 cut(s) 273
PsuI RGATCY 1 cut(s) 383
PsyI GACNNNGTC 1 cut(s) 401
RseI CAYNNNNRTG 2 cut(s) 434, 483
SacI GAGCTC 1 cut(s) 444
SaqAI TTAA 1 cut(s) 291
SatI GCNGC 1 cut(s) 106
Sau3AI GATC 3 cut(s) 76, 312, 383
Sau96I GGNCC 1 cut(s) 573
ScrFI CCNGG 3 cut(s) 26, 268, 505
SduI GDGCHC 1 cut(s) 444
SetI ASST 7 cut(s) 173, 254, 444, 463, 473, 619, 638
SfaNI GCATC 3 cut(s) 154, 406, 428
SinI GGWCC 1 cut(s) 573
SmiMI CAYNNNNRTG 2 cut(s) 434, 483
SmlI CTYRAG 2 cut(s) 110, 258
SmoI CTYRAG 2 cut(s) 110, 258
Sse9I AATT 4 cut(s) 20, 118, 356, 388
SseBI AGGCCT 1 cut(s) 538
SsiI CCGC 1 cut(s) 105
SstI GAGCTC 1 cut(s) 444
StuI AGGCCT 1 cut(s) 538
StyD4I CCNGG 3 cut(s) 24, 266, 503
TaqI TCGA 1 cut(s) 150
TasI AATT 4 cut(s) 20, 118, 356, 388
TauI GCSGC 1 cut(s) 108
Tru1I TTAA 1 cut(s) 291
Tru9I TTAA 1 cut(s) 291
TscAI CASTG 3 cut(s) 39, 187, 607
TseFI GTSAC 1 cut(s) 579
Tsp45I GTSAC 1 cut(s) 579
TspDTI ATGAA 3 cut(s) 56, 79, 163
TspRI CASTG 3 cut(s) 39, 187, 607
Tth111I GACNNNGTC 1 cut(s) 401
VpaK11BI GGWCC 1 cut(s) 573
XapI RAATTY 1 cut(s) 118
XceI RCATGY 1 cut(s) 482
Zsp2I ATGCAT 1 cut(s) 421
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.