RchiOBHm_Chr2g0141591

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000083
Physical Location & Seq
Reverse (-)
59128575 .. 59132110
3536 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ51185

Sequence Viewer

Length: 1632 bp
ATGTATCCATTTGATATGCATGATCGATTCTGGTACGGTTATAGCCGCGAACATTGGGCACAATTAAGTACCTCATCGACCATTGACCTCAATCAAAACGAATTTTACCAGCCAGCATCTGATGTTATGCGTACTGCTGGCACGCCGAAACTTGCAACTGATGACTTGAGTTTCTCCCGGCTGCCTGCTGATAAAAATGCAGAATATTTTGTTTACATGCACTTTGCAGAAGTTGAAGAACTCTCAGCTAACCAGTCTAGACAGCTTGATATTACTATGAATGGAGAACTGTTTTATGGACCATTTGCTCCTGGGTATTTGGAGACATTTACTGTTTGGAGCAAACAGGCAATGAGTGGAGGACAATACAACTTTTCAGTCATAAAGGGAGCTGGCAACTCTGACCTTCAACCTATCCTTAATGCCATCGAGATTTATACATTAAAAGAATTCTCAGAACAAGAAACAAACCAAGATGATGTGAATGCAATCAAAAATATCAAGGTAGCATATAAAATTGAGAAGAATTGGCAAGGAGATCCATGTTTCCCAAAGAATTACTCATGGGAAGGTCTAAACTGTAGCTATTCTCCAAATGATTCACCAAGAATCATATATGTTTTCCAAAAATTTTCCAAAAAATTACTGAAAATTTCTATTGCAGTACATACACTTTGTAAACTGGACTTATCTAACAACAACTTAACAGGACCAATTCCAGACTTCTTGTCTCAAATGTCAAATTTAAATGTCATAAACTTGGAGAACAACAAGCTCACAGGCTCAGTTCCAAATGAACTTACTGAAAGAGCAAAAAATGGTTTACTATCATTAAGGTTTGTTTTGTTGAAAACCTGTACCATAGAATTTTCTGTTAATCTTCTTATGAGGGTTCATCATACAAACTTGACTAGCCTTGTAGGATATTGTGATGATGAAAACAACAAAGGACTCGTTTATGAGTACATGGCCATGGGAAACTTACAAGAACATCTTTCAGATAAAAGTTCAAATGTCTTGACTTGGGACGGTAGACTTCAAGTAGCAACAGACGCTGCACAAGGATTGGAATATCTACACTATGGTTGTAAACCTCCTATGATCCATAGGGATGTGAAAACAACAAACATCTTGCTATCAGAAAACTTGCAAGCCAAACTCTCTGATTTCGGCCTCTCTAGAAATTTCCCTGCAGGCGATGGAACTCATATAGTTACAGGTGTTGCTGGAACCCCTGGCTACCTGGCACCCGAGTATAAACAACTAAACAGGTTCAATGAGAAGAGTGACGTCTATAGCTTTGGGGTTGTACTGCTGGAGATTATCACAGGTAGACCTGCTGTTTCGAGGACACGAGAGAGAATTGTCATCAATGAATGGGTTGGATCAATCATTCCAAAAGGAGACATTGACACAATTGTGGATCCGAGGTTAAAAGGAATATTCAATGTTAGCTCTGCCTGGAAAGTAGTGGAAATAGCAATGGCTTGTGTCTCTCCAGAGGCCAATAAAAGGCCAACCATGAGTAAAGTTGTTGGAGAACTGAAGCAGTGTCTGGAAACACAACTGTCTCAAAGAAACCAGAGGAATTCCTTTGAGATTGTGTCTCAGAATGGTCCCTCAGTTAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

543

Amino Acids

61.19

Weight (kDa)

5.89

Isoelectric Point (pI)

37.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 2 - 147 1.1e-34 Malectin-like domain
PK_Tyr_Ser-Thr PF07714 292 - 514 1.2e-36 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 292 - 512 1.7e-33 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1293
Acc36I ACCTGC 1 cut(s) 1345
AccB1I GGYRCC 1 cut(s) 1246
AccI GTMKAC 2 cut(s) 1033, 1333
AccII CGCG 1 cut(s) 48
AciI CCGC 1 cut(s) 46
AclWI GGATC 5 cut(s) 533, 1096, 1393, 1418, 1431
AcoI YGGCCR 1 cut(s) 969
AcsI RAATTY 8 cut(s) 101, 449, 629, 651, 742, 866, 1183, 1588
AcuI CTGAAG 1 cut(s) 1565
AcyI GRCGYC 1 cut(s) 1290
AfaI GTAC 7 cut(s) 35, 70, 133, 666, 859, 965, 1311
AfiI CCNNNNNNNGG 1 cut(s) 1512
AgsI TTSAA 7 cut(s) 236, 410, 850, 1011, 1040, 1276, 1447
AhdI GACNNNNNGTC 1 cut(s) 727
AjnI CCWGG 4 cut(s) 310, 1234, 1242, 1460
AleI CACNNNNGTG 1 cut(s) 1418
AluBI AGCT 7 cut(s) 248, 265, 392, 585, 775, 1299, 1455
AluI AGCT 7 cut(s) 248, 265, 392, 585, 775, 1299, 1455
Alw26I GTCTC 6 cut(s) 317, 735, 1398, 1498, 1575, 1611
AlwI GGATC 5 cut(s) 533, 1096, 1393, 1418, 1431
AlwNI CAGNNNCTG 3 cut(s) 119, 1055, 1555
Ama87I CYCGRG 1 cut(s) 1250
AoxI GGCC 4 cut(s) 969, 1171, 1503, 1514
ApeKI GCWGC 2 cut(s) 181, 1055
ApoI RAATTY 8 cut(s) 101, 449, 629, 651, 742, 866, 1183, 1588
AspS9I GGNCC 3 cut(s) 299, 710, 1616
AsuC2I CCSGG 1 cut(s) 178
AsuHPI GGTGA 1 cut(s) 594
AvaI CYCGRG 1 cut(s) 1250
AvaII GGWCC 3 cut(s) 299, 710, 1616
BaeGI GKGCMC 1 cut(s) 61
BalI TGGCCA 1 cut(s) 971
BamHI GGATCC 1 cut(s) 1423
BanI GGYRCC 1 cut(s) 1246
BauI CACGAG 1 cut(s) 1353
BbvI GCAGC 2 cut(s) 168, 1042
BccI CCATC 2 cut(s) 434, 1193
BciT130I CCWGG 4 cut(s) 312, 1236, 1244, 1462
BciVI GTATCC 1 cut(s) 15
BcnI CCSGG 1 cut(s) 178
BcoDI GTCTC 6 cut(s) 317, 735, 1398, 1498, 1575, 1611
BfaI CTAG 3 cut(s) 258, 912, 1179
BfmI CTRYAG 3 cut(s) 580, 1191, 1294
BfuAI ACCTGC 1 cut(s) 1345
BfuI GTATCC 1 cut(s) 15
BisI GCNGC 3 cut(s) 46, 182, 1056
BlsI GCNGC 3 cut(s) 47, 183, 1057
Bme1390I CCNGG 5 cut(s) 178, 312, 1236, 1244, 1462
Bme18I GGWCC 3 cut(s) 299, 710, 1616
BmeRI GACNNNNNGTC 1 cut(s) 727
BmeT110I CYCGRG 1 cut(s) 1250
BmgT120I GGNCC 3 cut(s) 299, 710, 1616
BmiI GGNNCC 4 cut(s) 1231, 1248, 1425, 1618
BmrFI CCNGG 5 cut(s) 178, 312, 1236, 1244, 1462
BmsI GCATC 1 cut(s) 125
BpmI CTGGAG 2 cut(s) 1337, 1482
BpuEI CTTGAG 1 cut(s) 187
BpuMI CCSGG 1 cut(s) 178
Bsa29I ATCGAT 1 cut(s) 25
BsaHI GRCGYC 1 cut(s) 1290
BsaJI CCNNGG 4 cut(s) 311, 972, 1234, 1427
Bsc4I CCNNNNNNNGG 1 cut(s) 1512
Bse1I ACTGG 2 cut(s) 253, 687
Bse3DI GCAATG 2 cut(s) 357, 1488
BseBI CCWGG 4 cut(s) 312, 1236, 1244, 1462
BseCI ATCGAT 1 cut(s) 25
BseDI CCNNGG 4 cut(s) 311, 972, 1234, 1427
BseGI GGATG 1 cut(s) 1117
BseLI CCNNNNNNNGG 1 cut(s) 1512
BseMI GCAATG 2 cut(s) 357, 1488
BseMII CTCAG 4 cut(s) 258, 468, 798, 1622
BseNI ACTGG 2 cut(s) 253, 687
BseSI GKGCMC 1 cut(s) 61
BseXI GCAGC 2 cut(s) 168, 1042
BsgI GTGCAG 1 cut(s) 1041
Bsh1236I CGCG 1 cut(s) 48
BshFI GGCC 4 cut(s) 971, 1173, 1505, 1516
BshNI GGYRCC 1 cut(s) 1246
BshVI ATCGAT 1 cut(s) 25
BsiHKCI CYCGRG 1 cut(s) 1250
BsiSI CCGG 1 cut(s) 178
BslFI GGGAC 2 cut(s) 1040, 1602
BslI CCNNNNNNNGG 1 cut(s) 1512
BsmAI GTCTC 6 cut(s) 317, 735, 1398, 1498, 1575, 1611
BsmFI GGGAC 2 cut(s) 1040, 1602
BsmI GAATGC 1 cut(s) 490
BsnI GGCC 4 cut(s) 971, 1173, 1505, 1516
BsoBI CYCGRG 1 cut(s) 1250
Bsp1286I GDGCHC 1 cut(s) 61
Bsp143I GATC 5 cut(s) 22, 538, 1101, 1385, 1423
Bsp19I CCATGG 1 cut(s) 972
BspACI CCGC 1 cut(s) 46
BspANI GGCC 4 cut(s) 971, 1173, 1505, 1516
BspCNI CTCAG 4 cut(s) 257, 467, 797, 1621
BspDI ATCGAT 1 cut(s) 25
BspFNI CGCG 1 cut(s) 48
BspLI GGNNCC 4 cut(s) 1231, 1248, 1425, 1618
BspMAI CTGCAG 1 cut(s) 1195
BspMI ACCTGC 1 cut(s) 1345
BspPI GGATC 5 cut(s) 533, 1096, 1393, 1418, 1431
BspT107I GGYRCC 1 cut(s) 1246
BsrDI GCAATG 2 cut(s) 357, 1488
BsrI ACTGG 2 cut(s) 253, 687
BssECI CCNNGG 4 cut(s) 311, 972, 1234, 1427
BssMI GATC 5 cut(s) 22, 538, 1101, 1385, 1423
BssNI GRCGYC 1 cut(s) 1290
BssSI CACGAG 1 cut(s) 1353
BssT1I CCWWGG 1 cut(s) 972
Bst2BI CACGAG 1 cut(s) 1353
Bst2UI CCWGG 4 cut(s) 312, 1236, 1244, 1462
Bst4CI ACNGT 6 cut(s) 38, 291, 334, 581, 1031, 1569
Bst6I CTCTTC 1 cut(s) 1277
BstACI GRCGYC 1 cut(s) 1290
BstC8I GCNNGC 7 cut(s) 114, 139, 143, 186, 394, 1152, 1195
BstDEI CTNAG 5 cut(s) 244, 454, 784, 1608, 1621
BstDSI CCRYGG 1 cut(s) 972
BstF5I GGATG 1 cut(s) 1117
BstFNI CGCG 1 cut(s) 48
BstKTI GATC 5 cut(s) 25, 541, 1104, 1388, 1426
BstMAI GTCTC 6 cut(s) 317, 735, 1398, 1498, 1575, 1611
BstMBI GATC 5 cut(s) 22, 538, 1101, 1385, 1423
BstMWI GCNNNNNNNGC 1 cut(s) 1052
BstNI CCWGG 4 cut(s) 312, 1236, 1244, 1462
BstNSI RCATGY 1 cut(s) 220
BstSCI CCNGG 5 cut(s) 176, 310, 1234, 1242, 1460
BstSFI CTRYAG 3 cut(s) 580, 1191, 1294
BstSLI GKGCMC 1 cut(s) 61
BstUI CGCG 1 cut(s) 48
BstV1I GCAGC 2 cut(s) 168, 1042
BstX2I RGATCY 2 cut(s) 538, 1423
BstYI RGATCY 2 cut(s) 538, 1423
Bsu15I ATCGAT 1 cut(s) 25
BsuI GTATCC 1 cut(s) 15
BsuRI GGCC 4 cut(s) 971, 1173, 1505, 1516
BsuTUI ATCGAT 1 cut(s) 25
BtgI CCRYGG 1 cut(s) 972
BtgZI GCGATG 1 cut(s) 1212
BtsCI GGATG 1 cut(s) 1117
BtsI GCAGTG 1 cut(s) 1556
BtsIMutI CAGTG 1 cut(s) 1556
BveI ACCTGC 1 cut(s) 1345
Cac8I GCNNGC 7 cut(s) 114, 139, 143, 186, 394, 1152, 1195
CaiI CAGNNNCTG 3 cut(s) 119, 1055, 1555
Cfr13I GGNCC 3 cut(s) 299, 710, 1616
ClaI ATCGAT 1 cut(s) 25
CseI GACGC 1 cut(s) 1061
Csp6I GTAC 7 cut(s) 34, 69, 132, 665, 858, 964, 1310
CviAII CATG 7 cut(s) 20, 217, 543, 564, 967, 973, 1522
CviQI GTAC 7 cut(s) 34, 69, 132, 665, 858, 964, 1310
DdeI CTNAG 5 cut(s) 244, 454, 784, 1608, 1621
DpnI GATC 5 cut(s) 24, 540, 1103, 1387, 1425
DpnII GATC 5 cut(s) 22, 538, 1101, 1385, 1423
DraI TTTAAA 1 cut(s) 747
DriI GACNNNNNGTC 1 cut(s) 727
EaeI YGGCCR 1 cut(s) 969
Eam1104I CTCTTC 1 cut(s) 1277
Eam1105I GACNNNNNGTC 1 cut(s) 727
EarI CTCTTC 1 cut(s) 1277
Eco130I CCWWGG 1 cut(s) 972
Eco47I GGWCC 3 cut(s) 299, 710, 1616
Eco57I CTGAAG 1 cut(s) 1565
Eco88I CYCGRG 1 cut(s) 1250
EcoRI GAATTC 2 cut(s) 449, 1588
EcoRII CCWGG 4 cut(s) 310, 1234, 1242, 1460
EcoT14I CCWWGG 1 cut(s) 972
EcoT22I ATGCAT 1 cut(s) 21
ErhI CCWWGG 1 cut(s) 972
FaeI CATG 7 cut(s) 23, 220, 546, 567, 970, 976, 1525
FalI AAGNNNNNCTT 2 cut(s) 978, 1010
FaqI GGGAC 2 cut(s) 1040, 1602
FatI CATG 7 cut(s) 19, 216, 542, 563, 966, 972, 1521
FblI GTMKAC 2 cut(s) 1033, 1333
Fnu4HI GCNGC 3 cut(s) 46, 182, 1056
FokI GGATG 1 cut(s) 1124
Fsp4HI GCNGC 3 cut(s) 46, 182, 1056
FspBI CTAG 3 cut(s) 258, 912, 1179
GluI GCNGC 3 cut(s) 46, 182, 1056
GsuI CTGGAG 2 cut(s) 1337, 1482
HaeIII GGCC 4 cut(s) 971, 1173, 1505, 1516
HapII CCGG 1 cut(s) 178
HgaI GACGC 1 cut(s) 1061
Hin1I GRCGYC 1 cut(s) 1290
Hin1II CATG 7 cut(s) 23, 220, 546, 567, 970, 976, 1525
HinfI GANTC 4 cut(s) 27, 599, 609, 951
HpaII CCGG 1 cut(s) 178
HphI GGTGA 1 cut(s) 594
Hpy166II GTNNAC 6 cut(s) 214, 680, 824, 1034, 1091, 1334
Hpy188I TCNGA 8 cut(s) 121, 403, 457, 1000, 1141, 1165, 1428, 1611
Hpy188III TCNNGA 7 cut(s) 258, 430, 719, 1018, 1179, 1499, 1556
Hpy8I GTNNAC 6 cut(s) 214, 680, 824, 1034, 1091, 1334
HpyAV CCTTC 2 cut(s) 416, 563
HpyCH4III ACNGT 6 cut(s) 38, 291, 334, 581, 1031, 1569
HpyCH4IV ACGT 1 cut(s) 1290
HpyF10VI GCNNNNNNNGC 1 cut(s) 1052
HpyF3I CTNAG 5 cut(s) 244, 454, 784, 1608, 1621
HpySE526I ACGT 1 cut(s) 1290
Hsp92I GRCGYC 1 cut(s) 1290
Hsp92II CATG 7 cut(s) 23, 220, 546, 567, 970, 976, 1525
Kzo9I GATC 5 cut(s) 22, 538, 1101, 1385, 1423
LmnI GCTCC 3 cut(s) 313, 339, 389
Lsp1109I GCAGC 2 cut(s) 168, 1042
LweI GCATC 1 cut(s) 125
MaeI CTAG 3 cut(s) 258, 912, 1179
MaeII ACGT 1 cut(s) 1290
MaeIII GTNAC 2 cut(s) 1213, 1286
MalI GATC 5 cut(s) 24, 540, 1103, 1387, 1425
MboI GATC 5 cut(s) 22, 538, 1101, 1385, 1423
MboII GAAGA 4 cut(s) 248, 535, 872, 1294
MfeI CAATTG 1 cut(s) 1416
MflI RGATCY 2 cut(s) 538, 1423
MhlI GDGCHC 1 cut(s) 61
MlsI TGGCCA 1 cut(s) 971
MluNI TGGCCA 1 cut(s) 971
MlyI GAGTC 1 cut(s) 945
MmeI TCCRAC 2 cut(s) 1363, 1516
Mox20I TGGCCA 1 cut(s) 971
Mph1103I ATGCAT 1 cut(s) 21
MscI TGGCCA 1 cut(s) 971
MseI TTAA 8 cut(s) 65, 420, 443, 704, 746, 833, 876, 1433
MslI CAYNNNNRTG 3 cut(s) 971, 1110, 1418
Msp20I TGGCCA 1 cut(s) 971
MspI CCGG 1 cut(s) 178
MspR9I CCNGG 5 cut(s) 178, 312, 1236, 1244, 1462
MunI CAATTG 1 cut(s) 1416
Mva1269I GAATGC 1 cut(s) 490
MvaI CCWGG 4 cut(s) 312, 1236, 1244, 1462
MvnI CGCG 1 cut(s) 48
MwoI GCNNNNNNNGC 1 cut(s) 1052
NciI CCSGG 1 cut(s) 178
NcoI CCATGG 1 cut(s) 972
NdeII GATC 5 cut(s) 22, 538, 1101, 1385, 1423
NlaIII CATG 7 cut(s) 23, 220, 546, 567, 970, 976, 1525
NlaIV GGNNCC 4 cut(s) 1231, 1248, 1425, 1618
NmuCI GTSAC 1 cut(s) 1286
NsiI ATGCAT 1 cut(s) 21
NspI RCATGY 1 cut(s) 220
OliI CACNNNNGTG 1 cut(s) 1418
PctI GAATGC 1 cut(s) 490
PfeI GAWTC 3 cut(s) 27, 599, 609
PkrI GCNGC 3 cut(s) 47, 183, 1057
PleI GAGTC 1 cut(s) 945
PpsI GAGTC 1 cut(s) 945
Psp6I CCWGG 4 cut(s) 310, 1234, 1242, 1460
PspGI CCWGG 4 cut(s) 310, 1234, 1242, 1460
PspN4I GGNNCC 4 cut(s) 1231, 1248, 1425, 1618
PspPI GGNCC 3 cut(s) 299, 710, 1616
PstI CTGCAG 1 cut(s) 1195
PstNI CAGNNNCTG 3 cut(s) 119, 1055, 1555
PsuI RGATCY 2 cut(s) 538, 1423
RsaI GTAC 7 cut(s) 35, 70, 133, 666, 859, 965, 1311
RsaNI GTAC 7 cut(s) 34, 69, 132, 665, 858, 964, 1310
RseI CAYNNNNRTG 3 cut(s) 971, 1110, 1418
SaqAI TTAA 8 cut(s) 65, 420, 443, 704, 746, 833, 876, 1433
SatI GCNGC 3 cut(s) 46, 182, 1056
Sau3AI GATC 5 cut(s) 22, 538, 1101, 1385, 1423
Sau96I GGNCC 3 cut(s) 299, 710, 1616
SbfI CCTGCAGG 1 cut(s) 1195
SchI GAGTC 1 cut(s) 945
ScrFI CCNGG 5 cut(s) 178, 312, 1236, 1244, 1462
SdaI CCTGCAGG 1 cut(s) 1195
SduI GDGCHC 1 cut(s) 61
SfaNI GCATC 1 cut(s) 125
SfcI CTRYAG 3 cut(s) 580, 1191, 1294
SinI GGWCC 3 cut(s) 299, 710, 1616
SmiI ATTTAAAT 1 cut(s) 747
SmiMI CAYNNNNRTG 3 cut(s) 971, 1110, 1418
SmlI CTYRAG 1 cut(s) 166
SmoI CTYRAG 1 cut(s) 166
Sse8387I CCTGCAGG 1 cut(s) 1195
SsiI CCGC 1 cut(s) 46
SspI AATATT 2 cut(s) 206, 1443
SspMI CTAG 3 cut(s) 258, 912, 1179
StyD4I CCNGG 5 cut(s) 176, 310, 1234, 1242, 1460
StyI CCWWGG 1 cut(s) 972
SwaI ATTTAAAT 1 cut(s) 747
TaaI ACNGT 6 cut(s) 38, 291, 334, 581, 1031, 1569
TaiI ACGT 1 cut(s) 1293
TaqI TCGA 4 cut(s) 25, 77, 429, 1346
TatI WGTACW 3 cut(s) 664, 963, 1309
TauI GCSGC 1 cut(s) 48
TfiI GAWTC 3 cut(s) 27, 599, 609
Tru1I TTAA 8 cut(s) 65, 420, 443, 704, 746, 833, 876, 1433
Tru9I TTAA 8 cut(s) 65, 420, 443, 704, 746, 833, 876, 1433
TscAI CASTG 1 cut(s) 1556
TseFI GTSAC 1 cut(s) 1286
TseI GCWGC 2 cut(s) 181, 1055
Tsp45I GTSAC 1 cut(s) 1286
TspDTI ATGAA 5 cut(s) 293, 810, 884, 951, 1389
TspRI CASTG 1 cut(s) 1556
VpaK11BI GGWCC 3 cut(s) 299, 710, 1616
XapI RAATTY 8 cut(s) 101, 449, 629, 651, 742, 866, 1183, 1588
XbaI TCTAGA 2 cut(s) 257, 1178
XceI RCATGY 1 cut(s) 220
XmiI GTMKAC 2 cut(s) 1033, 1333
XspI CTAG 3 cut(s) 258, 912, 1179
ZraI GACGTC 1 cut(s) 1291
Zsp2I ATGCAT 1 cut(s) 21
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.