pycom09g11570

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Forward (+)
9806689 .. 9807900
1212 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g11570.1

Sequence Viewer

Length: 360 bp
ATGCTACGGAACCAATATTCGGTGTCTTGTATCCCAAAGATGTCACGGACAATGAAGCAACTCTTCCTCTTTGCAGCGCAGCTTGGTGGTTTTGCTCTCAATCTTTTGCTCCTAGTTCATGCGCAAGATCAATCAGGCTTCATTAGCATAGGTTGTGGCCTAGGGGAAGATTCCGAGTATAATGAAAGTGGGACAGGCATTAACTATATTTCAGATGAAAACTTCGTAGCCACTGGCGAACCGAAGCATGTGTCGCCTGAATACAAAGACAAGTATTCCCATTCATACAACTCTCTTAGAAGCTTCCCTGAAGGAATCCGAAACTGCTACAAAATAAACGTTACAAGTAAAACCAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

120

Amino Acids

13.3

Weight (kDa)

7.71

Isoelectric Point (pI)

44.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 50 - 119 6.9e-20 Malectin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 123
AclI AACGTT 1 cut(s) 339
AcuI CTGAAG 1 cut(s) 330
AfiI CCNNNNNNNGG 1 cut(s) 19
AluBI AGCT 2 cut(s) 82, 303
AluI AGCT 2 cut(s) 82, 303
AoxI GGCC 1 cut(s) 157
ApeKI GCWGC 2 cut(s) 74, 79
ArsI GACNNNNNNTTYG 2 cut(s) 236, 268
AspA2I CCTAGG 1 cut(s) 160
AspLEI GCGC 2 cut(s) 79, 124
AvrII CCTAGG 1 cut(s) 160
BbvI GCAGC 2 cut(s) 86, 91
BciVI GTATCC 1 cut(s) 41
BfaI CTAG 2 cut(s) 113, 161
BfuI GTATCC 1 cut(s) 41
BisI GCNGC 2 cut(s) 75, 80
BlnI CCTAGG 1 cut(s) 160
BlsI GCNGC 2 cut(s) 76, 81
BmiI GGNNCC 1 cut(s) 11
BsaJI CCNNGG 1 cut(s) 160
Bsc4I CCNNNNNNNGG 1 cut(s) 19
Bse1I ACTGG 1 cut(s) 238
BseDI CCNNGG 1 cut(s) 160
BseLI CCNNNNNNNGG 1 cut(s) 19
BseNI ACTGG 1 cut(s) 238
BseXI GCAGC 2 cut(s) 86, 91
BshFI GGCC 1 cut(s) 159
BslFI GGGAC 1 cut(s) 205
BslI CCNNNNNNNGG 1 cut(s) 19
BsmFI GGGAC 1 cut(s) 205
BsnI GGCC 1 cut(s) 159
Bsp143I GATC 1 cut(s) 127
BspANI GGCC 1 cut(s) 159
BspLI GGNNCC 1 cut(s) 11
BsrI ACTGG 1 cut(s) 238
BssECI CCNNGG 1 cut(s) 160
BssMI GATC 1 cut(s) 127
BssT1I CCWWGG 1 cut(s) 160
Bst6I CTCTTC 1 cut(s) 68
BstDEI CTNAG 1 cut(s) 296
BstHHI GCGC 2 cut(s) 79, 124
BstKTI GATC 1 cut(s) 130
BstMBI GATC 1 cut(s) 127
BstMWI GCNNNNNNNGC 2 cut(s) 144, 253
BstNSI RCATGY 1 cut(s) 251
BstV1I GCAGC 2 cut(s) 86, 91
BsuI GTATCC 1 cut(s) 41
BsuRI GGCC 1 cut(s) 159
BtsIMutI CAGTG 1 cut(s) 231
CfoI GCGC 2 cut(s) 79, 124
CviAII CATG 2 cut(s) 119, 248
CviJI RGCY 5 cut(s) 82, 138, 159, 230, 303
CviKI_1 RGCY 5 cut(s) 82, 138, 159, 230, 303
DdeI CTNAG 1 cut(s) 296
DpnI GATC 1 cut(s) 129
DpnII GATC 1 cut(s) 127
Eam1104I CTCTTC 1 cut(s) 68
EarI CTCTTC 1 cut(s) 68
Eco130I CCWWGG 1 cut(s) 160
Eco57I CTGAAG 1 cut(s) 330
EcoT14I CCWWGG 1 cut(s) 160
ErhI CCWWGG 1 cut(s) 160
FaeI CATG 2 cut(s) 122, 251
FaiI YATR 6 cut(s) 120, 149, 180, 207, 249, 286
FalI AAGNNNNNCTT 2 cut(s) 47, 79
FaqI GGGAC 1 cut(s) 205
FatI CATG 2 cut(s) 118, 247
Fnu4HI GCNGC 2 cut(s) 75, 80
Fsp4HI GCNGC 2 cut(s) 75, 80
FspBI CTAG 2 cut(s) 113, 161
FspI TGCGCA 1 cut(s) 123
GlaI GCGC 2 cut(s) 78, 123
GluI GCNGC 2 cut(s) 75, 80
HaeIII GGCC 1 cut(s) 159
HhaI GCGC 2 cut(s) 79, 124
Hin1II CATG 2 cut(s) 122, 251
Hin6I GCGC 2 cut(s) 77, 122
HinP1I GCGC 2 cut(s) 77, 122
HindIII AAGCTT 1 cut(s) 301
HinfI GANTC 2 cut(s) 170, 315
Hpy188I TCNGA 3 cut(s) 175, 214, 320
HpyAV CCTTC 1 cut(s) 305
HpyCH4IV ACGT 1 cut(s) 339
HpyCH4V TGCA 1 cut(s) 74
HpyF10VI GCNNNNNNNGC 2 cut(s) 144, 253
HpyF3I CTNAG 1 cut(s) 296
HpySE526I ACGT 1 cut(s) 339
Hsp92II CATG 2 cut(s) 122, 251
HspAI GCGC 2 cut(s) 77, 122
Kzo9I GATC 1 cut(s) 127
LmnI GCTCC 1 cut(s) 114
LpnPI CCDG 5 cut(s) 120, 180, 219, 270, 321
Lsp1109I GCAGC 2 cut(s) 86, 91
MaeI CTAG 2 cut(s) 113, 161
MaeII ACGT 1 cut(s) 339
MaeIII GTNAC 2 cut(s) 42, 340
MalI GATC 1 cut(s) 129
MboI GATC 1 cut(s) 127
MboII GAAGA 2 cut(s) 55, 179
MnlI CCTC 1 cut(s) 77
MseI TTAA 1 cut(s) 201
MwoI GCNNNNNNNGC 2 cut(s) 144, 253
NdeII GATC 1 cut(s) 127
NlaIII CATG 2 cut(s) 122, 251
NlaIV GGNNCC 1 cut(s) 11
NmuCI GTSAC 1 cut(s) 42
NsbI TGCGCA 1 cut(s) 123
NspI RCATGY 1 cut(s) 251
PfeI GAWTC 2 cut(s) 170, 315
PkrI GCNGC 2 cut(s) 76, 81
Psp1406I AACGTT 1 cut(s) 339
PspN4I GGNNCC 1 cut(s) 11
SaqAI TTAA 1 cut(s) 201
SatI GCNGC 2 cut(s) 75, 80
Sau3AI GATC 1 cut(s) 127
SetI ASST 4 cut(s) 84, 154, 305, 342
SspI AATATT 1 cut(s) 17
SspMI CTAG 2 cut(s) 113, 161
StyI CCWWGG 1 cut(s) 160
TaiI ACGT 1 cut(s) 342
TfiI GAWTC 2 cut(s) 170, 315
Tru1I TTAA 1 cut(s) 201
Tru9I TTAA 1 cut(s) 201
TscAI CASTG 1 cut(s) 238
TseFI GTSAC 1 cut(s) 42
TseI GCWGC 2 cut(s) 74, 79
Tsp45I GTSAC 1 cut(s) 42
TspDTI ATGAA 6 cut(s) 68, 107, 130, 198, 231, 273
TspGWI ACGGA 2 cut(s) 22, 61
TspRI CASTG 1 cut(s) 238
XceI RCATGY 1 cut(s) 251
XmaJI CCTAGG 1 cut(s) 160
XspI CTAG 2 cut(s) 113, 161
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.