RLG00000019514

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
53022313 .. 53023432
1120 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019514

Sequence Viewer

Length: 573 bp
ATGATTGAAAATTTTCCTAGGTTAAATAATGCAAAGATCCAGAATTCTATTCAGAGCTGGTCATTGGAGTCAGAGGATCAACGCTGTACATACTCAGAGCTTGTGAAGATTACCAATAATTTTGCATCAATCATCGGAAGAGGCAGATTCGAAAGAGTCTACCATGGCACTCTGAAAAATGATATTCAAGTCGCTGTGAAGTTACTGACTTCTTCTTCCAGGCAAGGCTCAAAAGAATTCCAAAATGAGGTTAAACTATTGATGACAGCTCATCAACCAAACTTGGTTTCTCTCATTGGTTACTGCGATGAAGGTGACACTATGGCACTTGTTTTTGAGTATGTAGCCAATGGAAATTTGCAGCAACATTTATCAGGGTTGGATTATCTACATGGTTGCAAGCCACCTATAGTCCATAGAGATCTGAAGGCTTCCAATATCTTGTTAAATGAAAAGTTGCAAGCCAAGATAGCTGATTTTGGTCTTTCTAAAGTTCTTGCAACTGAAAGCGCCACTCATATATCAACTGATGCCAAAGGAACATCCGTAGATTTTCTTATTTTATTTTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

191

Amino Acids

21.21

Weight (kDa)

6.59

Isoelectric Point (pI)

26.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 42 - 125 1.6e-17 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 43 - 175 5.8e-25 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 125 - 177 1e-10 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 159
AclWI GGATC 2 cut(s) 31, 84
AcsI RAATTY 4 cut(s) 10, 43, 236, 355
AcuI CTGAAG 1 cut(s) 446
AfaI GTAC 1 cut(s) 88
AfiI CCNNNNNNNGG 1 cut(s) 247
AgsI TTSAA 2 cut(s) 8, 188
AjnI CCWGG 1 cut(s) 218
AjuI GAANNNNNNNTTGG 2 cut(s) 271, 303
AluBI AGCT 4 cut(s) 57, 100, 269, 473
AluI AGCT 4 cut(s) 57, 100, 269, 473
AlwI GGATC 2 cut(s) 31, 84
ApeKI GCWGC 1 cut(s) 361
ApoI RAATTY 4 cut(s) 10, 43, 236, 355
Asp700I GAANNNNTTC 1 cut(s) 12
AspA2I CCTAGG 1 cut(s) 17
AspLEI GCGC 1 cut(s) 512
AsuHPI GGTGA 1 cut(s) 326
AsuII TTCGAA 1 cut(s) 150
AvrII CCTAGG 1 cut(s) 17
BbvI GCAGC 1 cut(s) 373
BciT130I CCWGG 1 cut(s) 220
BfaI CTAG 1 cut(s) 18
BfmI CTRYAG 1 cut(s) 408
BfoI RGCGCY 1 cut(s) 513
BglII AGATCT 1 cut(s) 421
BisI GCNGC 1 cut(s) 362
BlnI CCTAGG 1 cut(s) 17
BlsI GCNGC 1 cut(s) 363
Bme1390I CCNGG 1 cut(s) 220
BmrFI CCNGG 1 cut(s) 220
BmsI GCATC 2 cut(s) 134, 520
Bpu14I TTCGAA 1 cut(s) 150
BsaJI CCNNGG 2 cut(s) 17, 163
Bsc4I CCNNNNNNNGG 1 cut(s) 247
BseBI CCWGG 1 cut(s) 220
BseDI CCNNGG 2 cut(s) 17, 163
BseGI GGATG 1 cut(s) 542
BseLI CCNNNNNNNGG 1 cut(s) 247
BseMII CTCAG 1 cut(s) 108
BseXI GCAGC 1 cut(s) 373
BslI CCNNNNNNNGG 1 cut(s) 247
Bsp119I TTCGAA 1 cut(s) 150
Bsp1407I TGTACA 1 cut(s) 86
Bsp143I GATC 3 cut(s) 36, 76, 421
Bsp19I CCATGG 1 cut(s) 163
BspCNI CTCAG 1 cut(s) 107
BspPI GGATC 2 cut(s) 31, 84
BspT104I TTCGAA 1 cut(s) 150
BsrGI TGTACA 1 cut(s) 86
BssECI CCNNGG 2 cut(s) 17, 163
BssMI GATC 3 cut(s) 36, 76, 421
BssT1I CCWWGG 2 cut(s) 17, 163
Bst2UI CCWGG 1 cut(s) 220
Bst6I CTCTTC 1 cut(s) 133
BstAUI TGTACA 1 cut(s) 86
BstBI TTCGAA 1 cut(s) 150
BstC8I GCNNGC 2 cut(s) 401, 462
BstDEI CTNAG 1 cut(s) 94
BstDSI CCRYGG 1 cut(s) 163
BstF5I GGATG 1 cut(s) 542
BstH2I RGCGCY 1 cut(s) 513
BstHHI GCGC 1 cut(s) 512
BstKTI GATC 3 cut(s) 39, 79, 424
BstMBI GATC 3 cut(s) 36, 76, 421
BstMWI GCNNNNNNNGC 1 cut(s) 470
BstNI CCWGG 1 cut(s) 220
BstSCI CCNGG 1 cut(s) 218
BstSFI CTRYAG 1 cut(s) 408
BstV1I GCAGC 1 cut(s) 373
BstX2I RGATCY 2 cut(s) 36, 421
BstYI RGATCY 2 cut(s) 36, 421
BtgI CCRYGG 1 cut(s) 163
BtgZI GCGATG 1 cut(s) 321
BtsCI GGATG 1 cut(s) 542
Cac8I GCNNGC 2 cut(s) 401, 462
CfoI GCGC 1 cut(s) 512
Csp6I GTAC 1 cut(s) 87
CviAII CATG 2 cut(s) 164, 392
CviJI RGCY 9 cut(s) 57, 100, 228, 269, 347, 403, 431, 464, 473
CviKI_1 RGCY 9 cut(s) 57, 100, 228, 269, 347, 403, 431, 464, 473
CviQI GTAC 1 cut(s) 87
DdeI CTNAG 1 cut(s) 94
DpnI GATC 3 cut(s) 38, 78, 423
DpnII GATC 3 cut(s) 36, 76, 421
Eam1104I CTCTTC 1 cut(s) 133
EarI CTCTTC 1 cut(s) 133
Eco130I CCWWGG 2 cut(s) 17, 163
Eco57I CTGAAG 1 cut(s) 446
EcoRI GAATTC 2 cut(s) 43, 236
EcoRII CCWGG 1 cut(s) 218
EcoT14I CCWWGG 2 cut(s) 17, 163
ErhI CCWWGG 2 cut(s) 17, 163
FaeI CATG 2 cut(s) 167, 395
FaiI YATR 9 cut(s) 91, 165, 323, 342, 393, 410, 417, 519, 521
FatI CATG 2 cut(s) 163, 391
FblI GTMKAC 1 cut(s) 159
Fnu4HI GCNGC 1 cut(s) 362
FokI GGATG 1 cut(s) 529
Fsp4HI GCNGC 1 cut(s) 362
FspBI CTAG 1 cut(s) 18
GlaI GCGC 1 cut(s) 511
GluI GCNGC 1 cut(s) 362
HaeII RGCGCY 1 cut(s) 513
HhaI GCGC 1 cut(s) 512
Hin1II CATG 2 cut(s) 167, 395
Hin6I GCGC 1 cut(s) 510
HinP1I GCGC 1 cut(s) 510
HinfI GANTC 3 cut(s) 68, 147, 156
HphI GGTGA 1 cut(s) 326
Hpy166II GTNNAC 1 cut(s) 160
Hpy188I TCNGA 6 cut(s) 54, 73, 97, 137, 174, 426
Hpy188III TCNNGA 1 cut(s) 40
Hpy8I GTNNAC 1 cut(s) 160
HpyAV CCTTC 2 cut(s) 305, 421
HpyCH4V TGCA 6 cut(s) 32, 125, 361, 399, 460, 500
HpyF10VI GCNNNNNNNGC 1 cut(s) 470
HpyF3I CTNAG 1 cut(s) 94
Hsp92II CATG 2 cut(s) 167, 395
HspAI GCGC 1 cut(s) 510
Kzo9I GATC 3 cut(s) 36, 76, 421
LpnPI CCDG 5 cut(s) 43, 53, 205, 232, 360
Lsp1109I GCAGC 1 cut(s) 373
LweI GCATC 2 cut(s) 134, 520
MaeI CTAG 1 cut(s) 18
MaeIII GTNAC 3 cut(s) 201, 299, 314
MalI GATC 3 cut(s) 38, 78, 423
MboI GATC 3 cut(s) 36, 76, 421
MboII GAAGA 4 cut(s) 118, 150, 204, 207
MflI RGATCY 2 cut(s) 36, 421
MluCI AATT 5 cut(s) 10, 43, 118, 236, 355
MlyI GAGTC 2 cut(s) 77, 165
MmeI TCCRAC 1 cut(s) 360
MnlI CCTC 3 cut(s) 67, 134, 241
MroXI GAANNNNTTC 1 cut(s) 12
MseI TTAA 3 cut(s) 23, 252, 446
MspR9I CCNGG 1 cut(s) 220
MvaI CCWGG 1 cut(s) 220
MwoI GCNNNNNNNGC 1 cut(s) 470
NcoI CCATGG 1 cut(s) 163
NdeII GATC 3 cut(s) 36, 76, 421
NlaIII CATG 2 cut(s) 167, 395
NmuCI GTSAC 1 cut(s) 314
NspV TTCGAA 1 cut(s) 150
PdmI GAANNNNTTC 1 cut(s) 12
PfeI GAWTC 1 cut(s) 147
PkrI GCNGC 1 cut(s) 363
PleI GAGTC 2 cut(s) 76, 164
PpsI GAGTC 2 cut(s) 76, 164
Psp6I CCWGG 1 cut(s) 218
PspGI CCWGG 1 cut(s) 218
PsuI RGATCY 2 cut(s) 36, 421
RsaI GTAC 1 cut(s) 88
RsaNI GTAC 1 cut(s) 87
SaqAI TTAA 3 cut(s) 23, 252, 446
SatI GCNGC 1 cut(s) 362
Sau3AI GATC 3 cut(s) 36, 76, 421
SchI GAGTC 2 cut(s) 77, 165
ScrFI CCNGG 1 cut(s) 220
SetI ASST 8 cut(s) 23, 59, 102, 252, 271, 316, 409, 475
SfaNI GCATC 2 cut(s) 134, 520
SfcI CTRYAG 1 cut(s) 408
SfuI TTCGAA 1 cut(s) 150
Sse9I AATT 5 cut(s) 10, 43, 118, 236, 355
SspMI CTAG 1 cut(s) 18
StyD4I CCNGG 1 cut(s) 218
StyI CCWWGG 2 cut(s) 17, 163
TaqI TCGA 1 cut(s) 150
TasI AATT 5 cut(s) 10, 43, 118, 236, 355
TatI WGTACW 1 cut(s) 86
TfiI GAWTC 1 cut(s) 147
Tru1I TTAA 3 cut(s) 23, 252, 446
Tru9I TTAA 3 cut(s) 23, 252, 446
TseFI GTSAC 1 cut(s) 314
TseI GCWGC 1 cut(s) 361
Tsp45I GTSAC 1 cut(s) 314
TspDTI ATGAA 2 cut(s) 324, 465
TspGWI ACGGA 1 cut(s) 535
XapI RAATTY 4 cut(s) 10, 43, 236, 355
XmaJI CCTAGG 1 cut(s) 17
XmiI GTMKAC 1 cut(s) 159
XmnI GAANNNNTTC 1 cut(s) 12
XspI CTAG 1 cut(s) 18
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.