FvH4_6g32700

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000083
Physical Location & Seq
Reverse (-)
25776665 .. 25781234
4570 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g32700.t1

Sequence Viewer

Length: 2604 bp
ATGTGGCAGAGATTTAAGCAGTTCTTTCTCTTCGTAGTATTCGGTTGTTTTGCTCTTAATATTCAGCTTCTAGTTCATGCTCAGGATGATCAATCAGGCTTCATTAGCATCGACTGTGGCCTACCAGAAAATTCAAGCTACACTGAACAGACAACAGGCATTCATTACATCTCAGACGCGGGATTCATAGACACCGGTGAAAGTAAATTGGTATTGCATGACAACAGAGAGAGCTATCAACAACCTTACTTATCTTTTAGGAGTTTTCCCAACGGAACCAGAAACTGCTACAAGATAAGTGTGGCAAAGGGCACCAAATATTTGATCAGAGCAAGTTTCTACTATGGGAATTATGATGGTCAAAATGAAATACCAGAATTCGACCTACATCTTGGGCCTAATTACTGGGATACAGTGAGGTTGAAGGATGCGGACACTACAACACACAAGGAGCTTATACATCACACACTACGGCGGAACTACATACATGTTTGTCTGGTGGAGTCAAACAAAGGTATTCCATTTATATCAGCAATAGAGCTAAGGCCTTTACCTAACGAAACTTATGAAGTGAAGGACTACTCCTTGGCACTAATCTGGCGATATGACACTGGTCAAAATTCTAAACAGTACAGGTATCCAAGTGATGTTCATGATCGTATATGGTATCCATTTGACCGTGATGATTGGGTACAAATAAATACCTCGTTAACTAGCACCACCGACGACAATAGCTACCAAGTTCCATCTGTTGTCATGTGTAGTGCTGCAACACCCGAAAATCCAGATGATTCCATGAATATTTTCTGGCTACCTTCTGATAACAATGCACAGTATCAAATTTATATGCACTTTGCAGAAGTAGAAAAGCTCCAAGCAAATGAGTCTAGACAACTCAATATTACTTTCTATGGAAACCTCTATTATGGACCATTTTCTCCTGATTACATGTCGGCCATAACTATTTATAGCGTACGGGCTTGGAGTCCAACAGGAGAATATATAAAGTTTTCAATCTTGAAGGATTTGAACTCTACCCTTCCACCTATCCTCAATGCTTATGAAATTTATATGGTCAAGCCGGCTTCCCAATCAGAGACAAACCAAGACGACAGATCGGCTTATAAGATTACAAGAAACTGGCAAGGGGATCCATGTTCCCCTCAAAACTACTCTTGGGAAGGCTTGAAGTGTAGCTATGCTGGAAACATCACGAGAATAATATCCTTGGACTTGTCCTCTAGTGGACTGACAGGGGAGATATCTCTTTTTATATCCAATCTCACGATGATAAAAACTTTAGATTTATCGAACAACAACCTAAGAGGATCAATTCCAGAGTTTTTGTCTCAGTTGCCAGAATTGAAAGTTCTAAACTTGGAAAAGAACAACTTCACAGGTTTAGTTCCATCAAGACTCATTGAGAGAAGGAACAACGGTTCACTGCAGCTAAGTTTGTGTGATAATCATCTATCCATACAAGTTTCATGCAAGAAGAAGAAGCACAATATTTTTCTTGTCGTAGTGCCAATTCTCGTAATTGTCATCCTCTTATTGACAATAGGAGCTGTCTTATTGGGCCTTAAAAAGAAAACAAAACCTGATACCCAGAATTCCATCCAAAGCTGGTCGTTGGAGCCAGAGGGTCAACGCTTTACATACTCAGAACTTGTGAAGATTACTAATAATTTTGCATCAATCATTGGGAAAGGCGGATTCGGAAGAGTCTACCATGGCACTCTGAAGAATCATATTCAAGTCGCTGTGAAGTTACTGACTTCTTCATCAAGGCAAGGCTCGAAAGAATTCCAAAATGAGGTCAAATTATTGATGACGGCTCATCATCGAAACTTGGTTTCTCTCATTGGTTACTGCGACGAAGGTGACACTATGGCACTTGTTTTTGAGTATGTAGCCAACGGAAATCTGCAGCAACATTTATCAGATCTGACGTTAAACGTTTTGACTTGGAAGGAACGACTTCAAATCGCCGTGGATGCAGCACGAGGGTTGGATTATCTACATAATGGTTGCAAGCCACCTATAGTCCATAGAGATCTGAAGGCTTCCAATATCTTGTTAAATGAAAAGTTGCAAGCCAAGATAGCTGATTTTGGTCTTTCTAAAGTTCTTGCAACTGAAAGTGCCACTCATATATCAACTGATGCCAAAGGAACATTCGGGTACCTTGATGCTGAATACTGCAATACAGGACAGCTCAACAAAAAGAATGATGTATACAGCTTTGGGATTGTGTTGCTGGAGCTAATAACTGGCAGAGCAGCCATAATAAGAGATGTAGAACCGTTTCCTATTCACATATGTCAATGGGTGACTCCTATATTTGAGAATATGGAAATTGAAAAGATAGTTGATTCAAGAATACGGGGTACCTACAACCATTTTTCTGCTAGGAAAGCTATAGAAATTGCCATGGCATGTGTGCCTTCATCAGCAATCCAAAGGCCAGAAATAAGCTCTGTGTATGTTCAATTGAAGGAATGCTTGGAAATTGAGATGACCTCTGAACAAGTAACAACAGTTACAGAGGTTCATGAGAGCGATGATGATACGAATTCAAGTAGTTCAGCTCTTGTAACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

868

Amino Acids

98.22

Weight (kDa)

5.89

Isoelectric Point (pI)

41.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 37 - 359 1.2e-112 Malectin-like domain
PK_Tyr_Ser-Thr PF07714 565 - 831 7.3e-50 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 566 - 764 1.1e-41 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1125
Acc65I GGTACC 2 cut(s) 2184, 2390
AccB1I GGYRCC 3 cut(s) 311, 2184, 2390
AccI GTMKAC 2 cut(s) 1728, 2238
AccII CGCG 1 cut(s) 179
AciI CCGC 4 cut(s) 179, 431, 475, 1713
AclI AACGTT 1 cut(s) 1959
AclWI GGATC 3 cut(s) 1145, 1158, 1336
AcoI YGGCCR 1 cut(s) 954
AcsI RAATTY 8 cut(s) 130, 377, 619, 840, 1065, 1612, 1805, 2575
AcuI CTGAAG 2 cut(s) 1763, 2081
AfaI GTAC 5 cut(s) 632, 693, 975, 2186, 2392
AfiI CCNNNNNNNGG 1 cut(s) 1816
AflIII ACRYGT 2 cut(s) 487, 948
AgeI ACCGGT 1 cut(s) 194
AjuI GAANNNNNNNTTGG 4 cut(s) 2162, 2194, 2489, 2521
AloI GAACNNNNNNTCC 2 cut(s) 1423, 1455
Alw26I GTCTC 2 cut(s) 1091, 1353
AlwI GGATC 3 cut(s) 1145, 1158, 1336
AlwNI CAGNNNCTG 1 cut(s) 285
AoxI GGCC 6 cut(s) 118, 395, 545, 954, 1579, 2465
ApeKI GCWGC 5 cut(s) 767, 1447, 1930, 2000, 2282
ApoI RAATTY 8 cut(s) 130, 377, 619, 840, 1065, 1612, 1805, 2575
AsiGI ACCGGT 1 cut(s) 194
Asp700I GAANNNNTTC 5 cut(s) 803, 1391, 1805, 1980, 2307
Asp718I GGTACC 2 cut(s) 2184, 2390
AspS9I GGNCC 3 cut(s) 395, 929, 1579
AsuHPI GGTGA 3 cut(s) 209, 1895, 2344
AvaII GGWCC 1 cut(s) 929
BaeGI GKGCMC 1 cut(s) 314
BamHI GGATCC 1 cut(s) 1150
BanI GGYRCC 3 cut(s) 311, 2184, 2390
BauI CACGAG 2 cut(s) 1213, 2004
BbvI GCAGC 5 cut(s) 754, 1459, 1942, 2012, 2294
BccI CCATC 4 cut(s) 350, 754, 1417, 1625
BceAI ACGGC 3 cut(s) 488, 1851, 1976
BciVI GTATCC 3 cut(s) 403, 648, 678
BclI TGATCA 2 cut(s) 88, 324
BcoDI GTCTC 2 cut(s) 1091, 1353
BfaI CTAG 5 cut(s) 71, 714, 888, 1242, 2412
BfmI CTRYAG 4 cut(s) 1445, 1928, 2043, 2421
BfuI GTATCC 3 cut(s) 403, 648, 678
BglII AGATCT 2 cut(s) 1945, 2056
BisI GCNGC 5 cut(s) 768, 1448, 1931, 2001, 2283
BlsI GCNGC 5 cut(s) 769, 1449, 1932, 2002, 2284
Bme18I GGWCC 1 cut(s) 929
BmgT120I GGNCC 3 cut(s) 395, 929, 1579
BmiI GGNNCC 6 cut(s) 277, 313, 1152, 1638, 2186, 2392
BmrI ACTGGG 1 cut(s) 415
BmsI GCATC 6 cut(s) 117, 418, 1703, 1987, 2155, 2182
BmuI ACTGGG 1 cut(s) 415
BoxI GACNNNNGTC 1 cut(s) 612
BplI GAGNNNNNCTC 2 cut(s) 2507, 2539
BpmI CTGGAG 1 cut(s) 2282
Bpu10I CCTNAGC 2 cut(s) 81, 542
BsaBI GATNNNNATC 1 cut(s) 1467
BsaJI CCNNGG 5 cut(s) 585, 1227, 1732, 1992, 2433
BsaWI WCCGGW 1 cut(s) 194
Bsc4I CCNNNNNNNGG 1 cut(s) 1816
Bse118I RCCGGY 2 cut(s) 194, 1081
Bse1I ACTGG 4 cut(s) 410, 616, 1145, 2278
Bse8I GATNNNNATC 1 cut(s) 1467
BseDI CCNNGG 5 cut(s) 585, 1227, 1732, 1992, 2433
BseGI GGATG 5 cut(s) 91, 433, 1545, 1617, 2002
BseJI GATNNNNATC 1 cut(s) 1467
BseLI CCNNNNNNNGG 1 cut(s) 1816
BseMII CTCAG 4 cut(s) 95, 186, 1364, 1677
BseNI ACTGG 4 cut(s) 410, 616, 1145, 2278
BseSI GKGCMC 1 cut(s) 314
BseXI GCAGC 5 cut(s) 754, 1459, 1942, 2012, 2294
Bsh1236I CGCG 1 cut(s) 179
BshFI GGCC 6 cut(s) 120, 397, 547, 956, 1581, 2467
BshNI GGYRCC 3 cut(s) 311, 2184, 2390
BshTI ACCGGT 1 cut(s) 194
BsiSI CCGG 2 cut(s) 195, 1082
BsiWI CGTACG 1 cut(s) 973
BslI CCNNNNNNNGG 1 cut(s) 1816
BsmAI GTCTC 2 cut(s) 1091, 1353
BsmI GAATGC 2 cut(s) 159, 2507
BsnI GGCC 6 cut(s) 120, 397, 547, 956, 1581, 2467
Bsp1286I GDGCHC 1 cut(s) 314
Bsp143I GATC 8 cut(s) 88, 324, 655, 1115, 1150, 1328, 1945, 2056
Bsp19I CCATGG 2 cut(s) 1732, 2433
BspACI CCGC 4 cut(s) 179, 431, 475, 1713
BspANI GGCC 6 cut(s) 120, 397, 547, 956, 1581, 2467
BspCNI CTCAG 4 cut(s) 94, 185, 1363, 1676
BspFNI CGCG 1 cut(s) 179
BspHI TCATGA 2 cut(s) 652, 2554
BspLI GGNNCC 6 cut(s) 277, 313, 1152, 1638, 2186, 2392
BspMAI CTGCAG 2 cut(s) 1449, 1932
BspPI GGATC 3 cut(s) 1145, 1158, 1336
BspT107I GGYRCC 3 cut(s) 311, 2184, 2390
BsrFI RCCGGY 2 cut(s) 194, 1081
BsrI ACTGG 4 cut(s) 410, 616, 1145, 2278
BssAI RCCGGY 2 cut(s) 194, 1081
BssECI CCNNGG 5 cut(s) 585, 1227, 1732, 1992, 2433
BssMI GATC 8 cut(s) 88, 324, 655, 1115, 1150, 1328, 1945, 2056
BssNAI GTATAC 1 cut(s) 2239
BssSI CACGAG 2 cut(s) 1213, 2004
BssT1I CCWWGG 4 cut(s) 585, 1227, 1732, 2433
Bst1107I GTATAC 1 cut(s) 2239
Bst2BI CACGAG 2 cut(s) 1213, 2004
Bst4CI ACNGT 8 cut(s) 116, 415, 630, 680, 834, 1439, 2307, 2542
Bst6I CTCTTC 2 cut(s) 35, 1717
BstC8I GCNNGC 3 cut(s) 1083, 2036, 2097
BstDEI CTNAG 7 cut(s) 81, 172, 542, 1322, 1350, 1451, 1663
BstDSI CCRYGG 3 cut(s) 1732, 1992, 2433
BstF5I GGATG 5 cut(s) 91, 433, 1545, 1617, 2002
BstFNI CGCG 1 cut(s) 179
BstKTI GATC 8 cut(s) 91, 327, 658, 1118, 1153, 1331, 1948, 2059
BstMAI GTCTC 2 cut(s) 1091, 1353
BstMBI GATC 8 cut(s) 88, 324, 655, 1115, 1150, 1328, 1945, 2056
BstMWI GCNNNNNNNGC 4 cut(s) 105, 1997, 2105, 2417
BstNSI RCATGY 3 cut(s) 491, 952, 2442
BstPAI GACNNNNGTC 1 cut(s) 612
BstSFI CTRYAG 4 cut(s) 1445, 1928, 2043, 2421
BstSLI GKGCMC 1 cut(s) 314
BstUI CGCG 1 cut(s) 179
BstV1I GCAGC 5 cut(s) 754, 1459, 1942, 2012, 2294
BstX2I RGATCY 3 cut(s) 1150, 1945, 2056
BstYI RGATCY 3 cut(s) 1150, 1945, 2056
BstZ17I GTATAC 1 cut(s) 2239
BsuI GTATCC 3 cut(s) 403, 648, 678
BsuRI GGCC 6 cut(s) 120, 397, 547, 956, 1581, 2467
BtgI CCRYGG 3 cut(s) 1732, 1992, 2433
BtgZI GCGATG 1 cut(s) 2577
BtsCI GGATG 5 cut(s) 91, 433, 1545, 1617, 2002
BtsI GCAGTG 1 cut(s) 1442
BtsIMutI CAGTG 4 cut(s) 141, 420, 609, 1442
Cac8I GCNNGC 3 cut(s) 1083, 2036, 2097
CaiI CAGNNNCTG 1 cut(s) 285
CciI TCATGA 2 cut(s) 652, 2554
Cfr10I RCCGGY 2 cut(s) 194, 1081
Cfr13I GGNCC 3 cut(s) 395, 929, 1579
CseI GACGC 1 cut(s) 185
Csp6I GTAC 5 cut(s) 631, 692, 974, 2185, 2391
CspAI ACCGGT 1 cut(s) 194
CviQI GTAC 5 cut(s) 631, 692, 974, 2185, 2391
DdeI CTNAG 7 cut(s) 81, 172, 542, 1322, 1350, 1451, 1663
DpnI GATC 8 cut(s) 90, 326, 657, 1117, 1152, 1330, 1947, 2058
DpnII GATC 8 cut(s) 88, 324, 655, 1115, 1150, 1328, 1945, 2056
EaeI YGGCCR 1 cut(s) 954
Eam1104I CTCTTC 2 cut(s) 35, 1717
EarI CTCTTC 2 cut(s) 35, 1717
EciI GGCGGA 2 cut(s) 490, 1728
Eco130I CCWWGG 4 cut(s) 585, 1227, 1732, 2433
Eco147I AGGCCT 1 cut(s) 547
Eco32I GATATC 1 cut(s) 1263
Eco47I GGWCC 1 cut(s) 929
Eco57I CTGAAG 2 cut(s) 1763, 2081
EcoRI GAATTC 4 cut(s) 377, 1612, 1805, 2575
EcoRV GATATC 1 cut(s) 1263
EcoT14I CCWWGG 4 cut(s) 585, 1227, 1732, 2433
ErhI CCWWGG 4 cut(s) 585, 1227, 1732, 2433
FalI AAGNNNNNCTT 6 cut(s) 8, 40, 1376, 1408, 2489, 2521
FauI CCCGC 1 cut(s) 172
FauNDI CATATG 1 cut(s) 2321
FbaI TGATCA 2 cut(s) 88, 324
FblI GTMKAC 2 cut(s) 1728, 2238
Fnu4HI GCNGC 5 cut(s) 768, 1448, 1931, 2001, 2283
FokI GGATG 5 cut(s) 98, 440, 1532, 1604, 2009
Fsp4HI GCNGC 5 cut(s) 768, 1448, 1931, 2001, 2283
FspBI CTAG 5 cut(s) 71, 714, 888, 1242, 2412
GluI GCNGC 5 cut(s) 768, 1448, 1931, 2001, 2283
GsuI CTGGAG 1 cut(s) 2282
HaeIII GGCC 6 cut(s) 120, 397, 547, 956, 1581, 2467
HapII CCGG 2 cut(s) 195, 1082
HgaI GACGC 1 cut(s) 185
HincII GTYRAC 2 cut(s) 711, 1649
HindII GTYRAC 2 cut(s) 711, 1649
HpaI GTTAAC 1 cut(s) 711
HpaII CCGG 2 cut(s) 195, 1082
HphI GGTGA 3 cut(s) 209, 1895, 2344
Hpy166II GTNNAC 6 cut(s) 711, 1247, 1442, 1649, 1729, 2239
Hpy8I GTNNAC 6 cut(s) 711, 1247, 1442, 1649, 1729, 2239
Hpy99I CGWCG 2 cut(s) 728, 1880
HpyCH4III ACNGT 8 cut(s) 116, 415, 630, 680, 834, 1439, 2307, 2542
HpyCH4IV ACGT 2 cut(s) 1952, 1959
HpyF10VI GCNNNNNNNGC 4 cut(s) 105, 1997, 2105, 2417
HpyF3I CTNAG 7 cut(s) 81, 172, 542, 1322, 1350, 1451, 1663
HpySE526I ACGT 2 cut(s) 1952, 1959
KpnI GGTACC 2 cut(s) 2188, 2394
KroI GCCGGC 1 cut(s) 1081
KroNI GCCGGC 1 cut(s) 1083
Ksp22I TGATCA 2 cut(s) 88, 324
KspAI GTTAAC 1 cut(s) 711
Kzo9I GATC 8 cut(s) 88, 324, 655, 1115, 1150, 1328, 1945, 2056
LmnI GCTCC 5 cut(s) 451, 876, 1565, 1636, 2263
Lsp1109I GCAGC 5 cut(s) 754, 1459, 1942, 2012, 2294
LweI GCATC 6 cut(s) 117, 418, 1703, 1987, 2155, 2182
MaeI CTAG 5 cut(s) 71, 714, 888, 1242, 2412
MaeII ACGT 2 cut(s) 1952, 1959
MaeIII GTNAC 7 cut(s) 1770, 1868, 1883, 2332, 2533, 2542, 2596
MalI GATC 8 cut(s) 90, 326, 657, 1117, 1152, 1330, 1947, 2058
MboI GATC 8 cut(s) 88, 324, 655, 1115, 1150, 1328, 1945, 2056
MboII GAAGA 7 cut(s) 22, 1507, 1510, 1687, 1734, 1756, 1773
MfeI CAATTG 1 cut(s) 2492
MflI RGATCY 3 cut(s) 1150, 1945, 2056
MhlI GDGCHC 1 cut(s) 314
MlyI GAGTC 6 cut(s) 512, 893, 994, 1410, 1734, 2329
MmeI TCCRAC 3 cut(s) 1013, 1614, 1992
MroNI GCCGGC 1 cut(s) 1081
MroXI GAANNNNTTC 5 cut(s) 803, 1391, 1805, 1980, 2307
MseI TTAA 6 cut(s) 15, 57, 710, 1584, 1955, 2081
MspI CCGG 2 cut(s) 195, 1082
MunI CAATTG 1 cut(s) 2492
Mva1269I GAATGC 2 cut(s) 159, 2507
MvnI CGCG 1 cut(s) 179
MwoI GCNNNNNNNGC 4 cut(s) 105, 1997, 2105, 2417
NaeI GCCGGC 1 cut(s) 1083
NcoI CCATGG 2 cut(s) 1732, 2433
NdeI CATATG 1 cut(s) 2321
NdeII GATC 8 cut(s) 88, 324, 655, 1115, 1150, 1328, 1945, 2056
NgoMIV GCCGGC 1 cut(s) 1081
NlaIV GGNNCC 6 cut(s) 277, 313, 1152, 1638, 2186, 2392
NmuCI GTSAC 2 cut(s) 1883, 2332
NspI RCATGY 3 cut(s) 491, 952, 2442
PagI TCATGA 2 cut(s) 652, 2554
PceI AGGCCT 1 cut(s) 547
PciI ACATGT 2 cut(s) 487, 948
PctI GAATGC 2 cut(s) 159, 2507
PdiI GCCGGC 1 cut(s) 1083
PdmI GAANNNNTTC 5 cut(s) 803, 1391, 1805, 1980, 2307
PfeI GAWTC 5 cut(s) 183, 791, 1716, 1747, 2375
Pfl23II CGTACG 1 cut(s) 973
PinAI ACCGGT 1 cut(s) 194
PkrI GCNGC 5 cut(s) 769, 1449, 1932, 2002, 2284
PleI GAGTC 6 cut(s) 511, 892, 993, 1410, 1733, 2329
PpsI GAGTC 6 cut(s) 511, 892, 993, 1410, 1733, 2329
PscI ACATGT 2 cut(s) 487, 948
PshAI GACNNNNGTC 1 cut(s) 612
PsiI TTATAA 1 cut(s) 1125
Psp1406I AACGTT 1 cut(s) 1959
PspLI CGTACG 1 cut(s) 973
PspN4I GGNNCC 6 cut(s) 277, 313, 1152, 1638, 2186, 2392
PspPI GGNCC 3 cut(s) 395, 929, 1579
PstI CTGCAG 2 cut(s) 1449, 1932
PstNI CAGNNNCTG 1 cut(s) 285
PsuI RGATCY 3 cut(s) 1150, 1945, 2056
RsaI GTAC 5 cut(s) 632, 693, 975, 2186, 2392
RsaNI GTAC 5 cut(s) 631, 692, 974, 2185, 2391
SaqAI TTAA 6 cut(s) 15, 57, 710, 1584, 1955, 2081
SatI GCNGC 5 cut(s) 768, 1448, 1931, 2001, 2283
Sau3AI GATC 8 cut(s) 88, 324, 655, 1115, 1150, 1328, 1945, 2056
Sau96I GGNCC 3 cut(s) 395, 929, 1579
SchI GAGTC 6 cut(s) 512, 893, 994, 1410, 1734, 2329
SduI GDGCHC 1 cut(s) 314
SfaNI GCATC 6 cut(s) 117, 418, 1703, 1987, 2155, 2182
SfcI CTRYAG 4 cut(s) 1445, 1928, 2043, 2421
SgrAI CRCCGGYG 1 cut(s) 194
SinI GGWCC 1 cut(s) 929
SseBI AGGCCT 1 cut(s) 547
SsiI CCGC 4 cut(s) 179, 431, 475, 1713
SspI AATATT 5 cut(s) 61, 320, 802, 901, 1510
SspMI CTAG 5 cut(s) 71, 714, 888, 1242, 2412
StuI AGGCCT 1 cut(s) 547
StyI CCWWGG 4 cut(s) 585, 1227, 1732, 2433
TaaI ACNGT 8 cut(s) 116, 415, 630, 680, 834, 1439, 2307, 2542
TaiI ACGT 2 cut(s) 1955, 1962
TaqI TCGA 5 cut(s) 111, 381, 1310, 1799, 1846
TatI WGTACW 1 cut(s) 630
TfiI GAWTC 5 cut(s) 183, 791, 1716, 1747, 2375
Tru1I TTAA 6 cut(s) 15, 57, 710, 1584, 1955, 2081
Tru9I TTAA 6 cut(s) 15, 57, 710, 1584, 1955, 2081
TscAI CASTG 4 cut(s) 148, 420, 616, 1449
TseFI GTSAC 2 cut(s) 1883, 2332
TseI GCWGC 5 cut(s) 767, 1447, 1930, 2000, 2282
Tsp45I GTSAC 2 cut(s) 1883, 2332
TspGWI ACGGA 2 cut(s) 288, 1935
TspRI CASTG 4 cut(s) 148, 420, 616, 1449
VpaK11BI GGWCC 1 cut(s) 929
XapI RAATTY 8 cut(s) 130, 377, 619, 840, 1065, 1612, 1805, 2575
XbaI TCTAGA 1 cut(s) 887
XceI RCATGY 3 cut(s) 491, 952, 2442
XmiI GTMKAC 2 cut(s) 1728, 2238
XmnI GAANNNNTTC 5 cut(s) 803, 1391, 1805, 1980, 2307
XspI CTAG 5 cut(s) 71, 714, 888, 1242, 2412
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.