Rroxscaffold_2G00103820

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000083
Physical Location & Seq
Reverse (-)
26832803 .. 26837202
4400 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00103820.1

Sequence Viewer

Length: 2160 bp
ATGGGGCTTATGTTCAAGCATCTCCTTTATGCAGTGCTCTGTTTTGCTCTTACACATGATCTGGTTCATGCCCAAGATAATCCATCAGGCTTCATCAGCTTGGACTGTGGACTGCCATCAGATCCTCCCTACTCTGAGCTAACCACAAAGATTAACTACATTTCAGATGCACCCTTCATCGACACCGGTGGGATCAGGAATTGTTACAGAGTAGACGTCACTAGTGGTACTAAATACTTGATTAGAGCTACTTTTCTTTATGGGAACTATGATGGGCTAAATAAATTGCCCAAGTTTGATCTGCACCTGGGACCTAATTTCTGGGATTCAGTGACACCCGCCTTTGCAAACACATCCACCATGAACGAACTCATTCACACTCCTTCATTAAACCACATACAAGTGTGTCTGCTGAACAAGGGCGCCGGAACACCATTCATTTCAGCATTGGAATTTAGGCCTTTGCCGAACACTACTTATGTGACCAACCCAGGTGATTCATTGGCACTAGCCTGGCGCTCAGATACTGCATCAACAAGCACTGGAGGTTACAGGTATAACTACGATGTTTTTGATCGCATCTGGAAGCCTTGGAACTCTGCTTATTGGACACAGATAAGTACCTCGCTTACCGTACAGGGCAATGATTACCAAGTACCAACTATAGTAATGAATACAGCCAGCACACCAATAGATGCTAATTATCCCATAAAAATCTCCTGGAACTCTACAGATAACACAACTCAATATTATCTCTACATGCATTTTGCTGAGCTGCAACAGCTTCAGGCCAATGAGTTCAGAGCATTCAATATCATTCTGGATGGGCAGCTTTTCGGTGAAAATGTTATTCCACAACATTTGTCCACAAACACTCTGTATTCCGCATCACCCATGTTACCTAAACCAATTCACAATTTGTCAATCTTCAAGACTGAGATTTCAACTCTACCACCTATCATTAATGCCATCGAGGTCTACACATTGAAAGACTTCTCACAACTTGAAACTGATGAAGACGACGTGGTTGCGATCATGAACATAAAGTCAACATACGGAGTGAAGAAGAATTGGGAAGGAGACCCATGTGCTCCACAAGAATACATTTGGGAAGGTCTCAACTGTAGCTCTAATGATTCTGATCACCCCAGAATCACATCATTTAACCTGGAAAAGAACAATATCAATGGTTCAGTTCCAGCTGAACTTGTTGAAAGATCAAGAAGCGGCAGACTAACTTTAAGTGTGGGAGAAAATGAAAACCTATGTGCAGAAAATTCATGTGAAAAGAAGAAAATAAATGAACTCATTACAGCAATAGCATCAGTTGGAGGAGTTTTCATTTTCTTGTTAGCAGCAGTGGCAATATCCATGGGACTGAAAAGAGGAAGGAAACCACATGTGTACCATGGCTATGCAGATGGTATTCAAGTTGCTGTGAAGATGCTTTCTCCATCATCAGCTCAAGGATACCAAGAATTTCAGACAGAGGCATGTGATGAGAGCAATGCGAATGTCTTGAGTTGGGAACGTAGACTGCAAATTGCAAGGGATGCATCACAAGGATTGGAGTATCTGCACAATGGTTGTAGGCCACCTATTGTCCACAGAGATGTGAAAACAACAAATATTTTGTTAGCTGAAAATTTCCAGGCAAAATTGGCTGATTTTGGCCTATCCAGAGTTTTCCCAACTGATGGAGGCACTCATATGTCCACAGCTGTTGTCGGTACGCCTGGATACCTTGATCCTGAGTACCACATAACCGGCAGGCTGAACGAGAAAAGTGATGTTTATAGCTTTGGAATTGCTCTCTTGCAAATAATCACTAGCCGTCCTGTGATATCAAGAGGTGCTCATGAAAATACTCATGTAAGTCAATGGGTGAGCTCCATGCTTGGTATAGGGGATGTTAAAAGTATTGTGGATCCGAGGTTATGCGGAGATTTCAAAGTTAACTCTGCCTGGAAGGCTGTTGAACTAGCAATGGATTGTATATCTGAAACATCAACTGAGAGGCCAAACATGAGTGAGGTAGTGACGAGACTAAAGGAATGCTTGGCTGAAGAAATAGCTCGTAAGAATGAGAGCCATTTGACTGGATCAACCGATTTATTCTCTATTAATGTAACTTCTCCACTCAATCCCTCGGCAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

719

Amino Acids

79.77

Weight (kDa)

5.48

Isoelectric Point (pI)

34.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 64 - 328 3.6e-92 Malectin-like domain
PK_Tyr_Ser-Thr PF07714 504 - 683 5.2e-21 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 509 - 680 2.2e-23 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 219
AccB1I GGYRCC 1 cut(s) 422
AccB7I CCANNNNNTGG 1 cut(s) 1697
AccI GTMKAC 3 cut(s) 213, 978, 1534
AciI CCGC 4 cut(s) 339, 885, 1227, 1941
AclWI GGATC 6 cut(s) 116, 200, 1742, 1922, 1935, 2110
AcsI RAATTY 4 cut(s) 452, 1276, 1478, 1645
AcuI CTGAAG 2 cut(s) 770, 2085
AcyI GRCGYC 2 cut(s) 216, 423
AfaI GTAC 7 cut(s) 229, 622, 636, 657, 1406, 1732, 1757
AfiI CCNNNNNNNGG 1 cut(s) 1697
AflIII ACRYGT 1 cut(s) 1399
AgeI ACCGGT 1 cut(s) 185
AhlI ACTAGT 1 cut(s) 221
AjiI CACGTC 1 cut(s) 1024
AjnI CCWGG 8 cut(s) 306, 490, 512, 719, 1167, 1650, 1735, 1964
Alw21I GWGCWC 4 cut(s) 39, 1093, 1858, 1892
Alw26I GTCTC 3 cut(s) 1074, 1121, 2038
AlwI GGATC 6 cut(s) 116, 200, 1742, 1922, 1935, 2110
AlwNI CAGNNNCTG 1 cut(s) 527
AoxI GGCC 5 cut(s) 458, 789, 1592, 1672, 2018
ApeKI GCWGC 3 cut(s) 775, 829, 1355
ApoI RAATTY 4 cut(s) 452, 1276, 1478, 1645
AseI ATTAAT 2 cut(s) 963, 2124
AsiGI ACCGGT 1 cut(s) 185
Asp700I GAANNNNTTC 2 cut(s) 372, 992
AspLEI GCGC 2 cut(s) 425, 519
AspS9I GGNCC 1 cut(s) 311
AsuHPI GGTGA 5 cut(s) 506, 851, 882, 1136, 1897
AvaII GGWCC 1 cut(s) 311
BaeI ACNNNNGTAYC 2 cut(s) 1388, 1421
BamHI GGATCC 1 cut(s) 1927
BanI GGYRCC 1 cut(s) 422
BanII GRGCYC 1 cut(s) 1892
BbsI GAAGAC 1 cut(s) 1023
Bbv12I GWGCWC 4 cut(s) 39, 1093, 1858, 1892
BbvI GCAGC 3 cut(s) 762, 841, 1367
BccI CCATC 8 cut(s) 91, 124, 266, 818, 977, 1415, 1462, 1691
BceAI ACGGC 1 cut(s) 1818
BcgI CGANNNNNNTGC 2 cut(s) 1010, 1044
BciT130I CCWGG 8 cut(s) 308, 492, 514, 721, 1169, 1652, 1737, 1966
BciVI GTATCC 2 cut(s) 1463, 1733
BclI TGATCA 1 cut(s) 1141
BcoDI GTCTC 3 cut(s) 1074, 1121, 2038
BcuI ACTAGT 1 cut(s) 221
BfaI CTAG 4 cut(s) 222, 509, 1830, 1982
BfmI CTRYAG 3 cut(s) 663, 729, 1123
BfoI RGCGCY 2 cut(s) 426, 520
BfuI GTATCC 2 cut(s) 1463, 1733
BglI GCCNNNNNGGC 1 cut(s) 1970
BisI GCNGC 4 cut(s) 776, 830, 1228, 1356
BlpI GCTNAGC 1 cut(s) 771
BlsI GCNGC 4 cut(s) 777, 831, 1229, 1357
Bme1390I CCNGG 8 cut(s) 308, 492, 514, 721, 1169, 1652, 1737, 1966
Bme18I GGWCC 1 cut(s) 311
BmgBI CACGTC 1 cut(s) 1024
BmgT120I GGNCC 1 cut(s) 311
BmiI GGNNCC 3 cut(s) 312, 424, 1929
BmrFI CCNGG 8 cut(s) 308, 492, 514, 721, 1169, 1652, 1737, 1966
BpiI GAAGAC 1 cut(s) 1023
BpmI CTGGAG 1 cut(s) 564
Bpu1102I GCTNAGC 1 cut(s) 771
BpuEI CTTGAG 2 cut(s) 1449, 1540
BsaBI GATNNNNATC 1 cut(s) 1140
BsaHI GRCGYC 2 cut(s) 216, 423
BsaI GGTCTC 2 cut(s) 1074, 1121
BsaJI CCNNGG 7 cut(s) 307, 490, 590, 1371, 1408, 1931, 2148
BsaWI WCCGGW 1 cut(s) 185
Bsc4I CCNNNNNNNGG 1 cut(s) 1697
Bse118I RCCGGY 2 cut(s) 185, 1766
Bse1I ACTGG 2 cut(s) 547, 2104
Bse3DI GCAATG 3 cut(s) 649, 1513, 1992
Bse8I GATNNNNATC 1 cut(s) 1140
BseBI CCWGG 8 cut(s) 308, 492, 514, 721, 1169, 1652, 1737, 1966
BseDI CCNNGG 7 cut(s) 307, 490, 590, 1371, 1408, 1931, 2148
BseGI GGATG 4 cut(s) 353, 829, 1558, 1915
BseJI GATNNNNATC 1 cut(s) 1140
BseLI CCNNNNNNNGG 1 cut(s) 1697
BseMI GCAATG 3 cut(s) 649, 1513, 1992
BseMII CTCAG 6 cut(s) 126, 534, 762, 927, 1743, 2004
BseNI ACTGG 2 cut(s) 547, 2104
BseRI GAGGAG 1 cut(s) 1347
BseXI GCAGC 3 cut(s) 762, 841, 1367
BsgI GTGCAG 3 cut(s) 287, 1290, 1562
BshFI GGCC 5 cut(s) 460, 791, 1594, 1674, 2020
BshNI GGYRCC 1 cut(s) 422
BshTI ACCGGT 1 cut(s) 185
BsiHKAI GWGCWC 4 cut(s) 39, 1093, 1858, 1892
BsiSI CCGG 3 cut(s) 186, 426, 1767
BslFI GGGAC 2 cut(s) 324, 1389
BslI CCNNNNNNNGG 1 cut(s) 1697
BsmAI GTCTC 3 cut(s) 1074, 1121, 2038
BsmFI GGGAC 2 cut(s) 324, 1389
BsmI GAATGC 2 cut(s) 806, 2060
BsnI GGCC 5 cut(s) 460, 791, 1594, 1674, 2020
Bso31I GGTCTC 2 cut(s) 1074, 1121
Bsp1286I GDGCHC 4 cut(s) 39, 1093, 1858, 1892
Bsp1720I GCTNAGC 1 cut(s) 771
Bsp19I CCATGG 2 cut(s) 1371, 1408
BspACI CCGC 4 cut(s) 339, 885, 1227, 1941
BspANI GGCC 5 cut(s) 460, 791, 1594, 1674, 2020
BspCNI CTCAG 6 cut(s) 127, 533, 763, 928, 1744, 2005
BspHI TCATGA 2 cut(s) 1035, 1858
BspLI GGNNCC 3 cut(s) 312, 424, 1929
BspPI GGATC 6 cut(s) 116, 200, 1742, 1922, 1935, 2110
BspT107I GGYRCC 1 cut(s) 422
BspTNI GGTCTC 2 cut(s) 1074, 1121
BsrDI GCAATG 3 cut(s) 649, 1513, 1992
BsrFI RCCGGY 2 cut(s) 185, 1766
BsrI ACTGG 2 cut(s) 547, 2104
BssAI RCCGGY 2 cut(s) 185, 1766
BssECI CCNNGG 7 cut(s) 307, 490, 590, 1371, 1408, 1931, 2148
BssNI GRCGYC 2 cut(s) 216, 423
BssT1I CCWWGG 3 cut(s) 590, 1371, 1408
Bst2UI CCWGG 8 cut(s) 308, 492, 514, 721, 1169, 1652, 1737, 1966
Bst4CI ACNGT 3 cut(s) 107, 634, 1124
BstACI GRCGYC 2 cut(s) 216, 423
BstAPI GCANNNNNTGC 1 cut(s) 1553
BstC8I GCNNGC 2 cut(s) 682, 1772
BstDEI CTNAG 6 cut(s) 135, 520, 771, 936, 1752, 2013
BstDSI CCRYGG 2 cut(s) 1371, 1408
BstF5I GGATG 4 cut(s) 353, 829, 1558, 1915
BstH2I RGCGCY 2 cut(s) 426, 520
BstHHI GCGC 2 cut(s) 425, 519
BstMAI GTCTC 3 cut(s) 1074, 1121, 2038
BstMWI GCNNNNNNNGC 6 cut(s) 96, 781, 1361, 1553, 1661, 1970
BstNI CCWGG 8 cut(s) 308, 492, 514, 721, 1169, 1652, 1737, 1966
BstNSI RCATGY 3 cut(s) 763, 1403, 1497
BstSCI CCNGG 8 cut(s) 306, 490, 512, 719, 1167, 1650, 1735, 1964
BstSFI CTRYAG 3 cut(s) 663, 729, 1123
BstV1I GCAGC 3 cut(s) 762, 841, 1367
BstV2I GAAGAC 1 cut(s) 1023
BstX2I RGATCY 2 cut(s) 121, 1927
BstXI CCANNNNNNTGG 1 cut(s) 2099
BstYI RGATCY 2 cut(s) 121, 1927
BsuI GTATCC 2 cut(s) 1463, 1733
BsuRI GGCC 5 cut(s) 460, 791, 1594, 1674, 2020
BtgI CCRYGG 2 cut(s) 1371, 1408
BtrI CACGTC 1 cut(s) 1024
BtsCI GGATG 4 cut(s) 353, 829, 1558, 1915
BtsI GCAGTG 2 cut(s) 39, 1365
BtsIMutI CAGTG 4 cut(s) 39, 336, 540, 1365
Cac8I GCNNGC 2 cut(s) 682, 1772
CaiI CAGNNNCTG 1 cut(s) 527
CciI TCATGA 2 cut(s) 1035, 1858
CfoI GCGC 2 cut(s) 425, 519
Cfr10I RCCGGY 2 cut(s) 185, 1766
Cfr13I GGNCC 1 cut(s) 311
Csp6I GTAC 7 cut(s) 228, 621, 635, 656, 1405, 1731, 1756
CspAI ACCGGT 1 cut(s) 185
CspCI CAANNNNNGTGG 4 cut(s) 843, 878, 1705, 1740
CviQI GTAC 7 cut(s) 228, 621, 635, 656, 1405, 1731, 1756
DdeI CTNAG 6 cut(s) 135, 520, 771, 936, 1752, 2013
DinI GGCGCC 1 cut(s) 424
Ecl136II GAGCTC 1 cut(s) 1890
Eco130I CCWWGG 3 cut(s) 590, 1371, 1408
Eco147I AGGCCT 1 cut(s) 460
Eco24I GRGCYC 1 cut(s) 1892
Eco31I GGTCTC 2 cut(s) 1074, 1121
Eco32I GATATC 1 cut(s) 1845
Eco47I GGWCC 1 cut(s) 311
Eco53kI GAGCTC 1 cut(s) 1890
Eco57I CTGAAG 2 cut(s) 770, 2085
EcoICRI GAGCTC 1 cut(s) 1890
EcoO109I RGGNCCY 1 cut(s) 311
EcoRII CCWGG 8 cut(s) 306, 490, 512, 719, 1167, 1650, 1735, 1964
EcoRV GATATC 1 cut(s) 1845
EcoT14I CCWWGG 3 cut(s) 590, 1371, 1408
EcoT22I ATGCAT 2 cut(s) 765, 1558
EcoT38I GRGCYC 1 cut(s) 1892
EgeI GGCGCC 1 cut(s) 424
EheI GGCGCC 1 cut(s) 424
ErhI CCWWGG 3 cut(s) 590, 1371, 1408
FalI AAGNNNNNCTT 2 cut(s) 2042, 2074
FaqI GGGAC 2 cut(s) 324, 1389
FauI CCCGC 1 cut(s) 346
FauNDI CATATG 1 cut(s) 1710
FbaI TGATCA 1 cut(s) 1141
FblI GTMKAC 3 cut(s) 213, 978, 1534
Fnu4HI GCNGC 4 cut(s) 776, 830, 1228, 1356
FokI GGATG 4 cut(s) 340, 836, 1565, 1922
FriOI GRGCYC 1 cut(s) 1892
Fsp4HI GCNGC 4 cut(s) 776, 830, 1228, 1356
FspBI CTAG 4 cut(s) 222, 509, 1830, 1982
GlaI GCGC 2 cut(s) 424, 518
GluI GCNGC 4 cut(s) 776, 830, 1228, 1356
GsuI CTGGAG 1 cut(s) 564
HaeII RGCGCY 2 cut(s) 426, 520
HaeIII GGCC 5 cut(s) 460, 791, 1594, 1674, 2020
HapII CCGG 3 cut(s) 186, 426, 1767
HhaI GCGC 2 cut(s) 425, 519
Hin1I GRCGYC 2 cut(s) 216, 423
Hin6I GCGC 2 cut(s) 423, 517
HinP1I GCGC 2 cut(s) 423, 517
HincII GTYRAC 2 cut(s) 1050, 1957
HindII GTYRAC 2 cut(s) 1050, 1957
HinfI GANTC 4 cut(s) 326, 497, 1136, 1152
HpaI GTTAAC 1 cut(s) 1957
HpaII CCGG 3 cut(s) 186, 426, 1767
HphI GGTGA 5 cut(s) 506, 851, 882, 1136, 1897
Hpy188I TCNGA 9 cut(s) 121, 136, 166, 523, 803, 1141, 1485, 1932, 2002
Hpy99I CGWCG 1 cut(s) 1025
HpyAV CCTTC 6 cut(s) 184, 393, 1070, 1106, 1383, 1963
HpyCH4III ACNGT 3 cut(s) 107, 634, 1124
HpyCH4IV ACGT 3 cut(s) 216, 1023, 1531
HpyF10VI GCNNNNNNNGC 6 cut(s) 96, 781, 1361, 1553, 1661, 1970
HpyF3I CTNAG 6 cut(s) 135, 520, 771, 936, 1752, 2013
HpySE526I ACGT 3 cut(s) 216, 1023, 1531
Hsp92I GRCGYC 2 cut(s) 216, 423
HspAI GCGC 2 cut(s) 423, 517
KasI GGCGCC 1 cut(s) 422
Ksp22I TGATCA 1 cut(s) 1141
KspAI GTTAAC 1 cut(s) 1957
LmnI GCTCC 2 cut(s) 1096, 1895
Lsp1109I GCAGC 3 cut(s) 762, 841, 1367
MaeI CTAG 4 cut(s) 222, 509, 1830, 1982
MaeII ACGT 3 cut(s) 216, 1023, 1531
MaeIII GTNAC 8 cut(s) 203, 217, 331, 481, 548, 897, 2038, 2128
MboII GAAGA 7 cut(s) 919, 1028, 1075, 1078, 1303, 1453, 2078
MflI RGATCY 2 cut(s) 121, 1927
MhlI GDGCHC 4 cut(s) 39, 1093, 1858, 1892
Mly113I GGCGCC 1 cut(s) 423
MmeI TCCRAC 1 cut(s) 1309
Mph1103I ATGCAT 2 cut(s) 765, 1558
MroXI GAANNNNTTC 2 cut(s) 372, 992
MseI TTAA 8 cut(s) 153, 389, 963, 1164, 1241, 1914, 1956, 2124
MslI CAYNNNNRTG 4 cut(s) 401, 1413, 1611, 1709
MspA1I CMGCKG 2 cut(s) 1202, 1721
MspI CCGG 3 cut(s) 186, 426, 1767
MspR9I CCNGG 8 cut(s) 308, 492, 514, 721, 1169, 1652, 1737, 1966
Mva1269I GAATGC 2 cut(s) 806, 2060
MvaI CCWGG 8 cut(s) 308, 492, 514, 721, 1169, 1652, 1737, 1966
MwoI GCNNNNNNNGC 6 cut(s) 96, 781, 1361, 1553, 1661, 1970
NarI GGCGCC 1 cut(s) 423
NcoI CCATGG 2 cut(s) 1371, 1408
NdeI CATATG 1 cut(s) 1710
NlaIV GGNNCC 3 cut(s) 312, 424, 1929
NmeAIII GCCGAG 1 cut(s) 2129
NmuCI GTSAC 4 cut(s) 217, 331, 481, 2038
NsiI ATGCAT 2 cut(s) 765, 1558
NspI RCATGY 3 cut(s) 763, 1403, 1497
PagI TCATGA 2 cut(s) 1035, 1858
PceI AGGCCT 1 cut(s) 460
PciI ACATGT 1 cut(s) 1399
PctI GAATGC 2 cut(s) 806, 2060
PdmI GAANNNNTTC 2 cut(s) 372, 992
PfeI GAWTC 4 cut(s) 326, 497, 1136, 1152
PflMI CCANNNNNTGG 1 cut(s) 1697
PfoI TCCNGGA 1 cut(s) 719
PinAI ACCGGT 1 cut(s) 185
PkrI GCNGC 4 cut(s) 777, 831, 1229, 1357
PluTI GGCGCC 1 cut(s) 426
PpuMI RGGWCCY 1 cut(s) 311
PscI ACATGT 1 cut(s) 1399
PshBI ATTAAT 2 cut(s) 963, 2124
Psp124BI GAGCTC 1 cut(s) 1892
Psp5II RGGWCCY 1 cut(s) 311
Psp6I CCWGG 8 cut(s) 306, 490, 512, 719, 1167, 1650, 1735, 1964
PspGI CCWGG 8 cut(s) 306, 490, 512, 719, 1167, 1650, 1735, 1964
PspN4I GGNNCC 3 cut(s) 312, 424, 1929
PspPI GGNCC 1 cut(s) 311
PspPPI RGGWCCY 1 cut(s) 311
PstNI CAGNNNCTG 1 cut(s) 527
PsuI RGATCY 2 cut(s) 121, 1927
PvuII CAGCTG 2 cut(s) 1202, 1721
RsaI GTAC 7 cut(s) 229, 622, 636, 657, 1406, 1732, 1757
RsaNI GTAC 7 cut(s) 228, 621, 635, 656, 1405, 1731, 1756
RseI CAYNNNNRTG 4 cut(s) 401, 1413, 1611, 1709
SacI GAGCTC 1 cut(s) 1892
SaqAI TTAA 8 cut(s) 153, 389, 963, 1164, 1241, 1914, 1956, 2124
SatI GCNGC 4 cut(s) 776, 830, 1228, 1356
Sau96I GGNCC 1 cut(s) 311
ScrFI CCNGG 8 cut(s) 308, 492, 514, 721, 1169, 1652, 1737, 1966
SduI GDGCHC 4 cut(s) 39, 1093, 1858, 1892
SfcI CTRYAG 3 cut(s) 663, 729, 1123
SfoI GGCGCC 1 cut(s) 424
SgrAI CRCCGGYG 1 cut(s) 185
SinI GGWCC 1 cut(s) 311
SmiMI CAYNNNNRTG 4 cut(s) 401, 1413, 1611, 1709
SmlI CTYRAG 2 cut(s) 1464, 1519
SmoI CTYRAG 2 cut(s) 1464, 1519
SpeI ACTAGT 1 cut(s) 221
SseBI AGGCCT 1 cut(s) 460
SsiI CCGC 4 cut(s) 339, 885, 1227, 1941
SspDI GGCGCC 1 cut(s) 422
SspI AATATT 2 cut(s) 749, 1630
SspMI CTAG 4 cut(s) 222, 509, 1830, 1982
SstI GAGCTC 1 cut(s) 1892
StuI AGGCCT 1 cut(s) 460
StyD4I CCNGG 8 cut(s) 306, 490, 512, 719, 1167, 1650, 1735, 1964
StyI CCWWGG 3 cut(s) 590, 1371, 1408
TaaI ACNGT 3 cut(s) 107, 634, 1124
TaiI ACGT 3 cut(s) 219, 1026, 1534
TaqI TCGA 2 cut(s) 180, 972
TauI GCSGC 1 cut(s) 1230
TfiI GAWTC 4 cut(s) 326, 497, 1136, 1152
Tru1I TTAA 8 cut(s) 153, 389, 963, 1164, 1241, 1914, 1956, 2124
Tru9I TTAA 8 cut(s) 153, 389, 963, 1164, 1241, 1914, 1956, 2124
TscAI CASTG 4 cut(s) 39, 336, 547, 1365
TseFI GTSAC 4 cut(s) 217, 331, 481, 2038
TseI GCWGC 3 cut(s) 775, 829, 1355
Tsp45I GTSAC 4 cut(s) 217, 331, 481, 2038
TspGWI ACGGA 1 cut(s) 1071
TspRI CASTG 4 cut(s) 39, 336, 547, 1365
Van91I CCANNNNNTGG 1 cut(s) 1697
VpaK11BI GGWCC 1 cut(s) 311
VspI ATTAAT 2 cut(s) 963, 2124
XapI RAATTY 4 cut(s) 452, 1276, 1478, 1645
XceI RCATGY 3 cut(s) 763, 1403, 1497
XmiI GTMKAC 3 cut(s) 213, 978, 1534
XmnI GAANNNNTTC 2 cut(s) 372, 992
XspI CTAG 4 cut(s) 222, 509, 1830, 1982
ZraI GACGTC 1 cut(s) 217
Zsp2I ATGCAT 2 cut(s) 765, 1558
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.