RLG00000019938

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
58861847 .. 58863366
1520 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019938

Sequence Viewer

Length: 837 bp
ATGGCCTTAGGAGATGTTAATGATTCAATACCAACCATTCAGCCAGAGTCAATCGAGCCATCATCACGACGTCAATTTACTTACTCTGAGGTTCTCCAAATCACCAACAATTTTGCGAGAATTATTGGTAGAGGAGGATTTGGAATGGTATATCATGGCACCATAGGTGACACTCAAGTAGCTGTGAAGTTGCTTTCACCATCTTCAGTTCAAGGATATCAAGAATTTCATTCAGAGGTTAATCTTCTAATGAGAGTTCATCACAAAAACTTGACGAGCCTTGTTGGATATTGCAAGGATGGAACCAATGCAGGGCTTATCTATGAATATATGGCTAATGGAAAATTACACAAACATCTTTCAGAATTTTTCCTGCTGAGGATGGGACTCGTCAATGGACACGTGTCACTGGAATCCTGGATACCTGAGTACTACCTATCAAACATGTTAAATGAAAAAAGTGATGTTTATAGCTTTGGGACTGTGCTGTTGGAGATAATCACAAGTAGACCTGTGTTATCAAAGACACATGAGAAAATTCACATTGCTCAATGGGTTAATTTCATGGTTGAGAAAGGGGACATTACAAGTATCATAGATTCAAGGCTAAAAGGAAACTTTGATAGTAATTCTGTGTGGAAGGCTGTTGAAATAGCTATATTTTGTGTATCTTCAAGTTCCAACAACAGGCCATCCATGAGTCACGTAGTGACAGAGCTGAAGGACTGCTTGGCTGCAGAATTGGCTCGAAAGGAGAGCTATGCAACAGAATCGAAAGATTCAGTTGAGATGATGTCACTGAAATTCACCACTGAGATGAGACCCCTGCCTAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

279

Amino Acids

31.25

Weight (kDa)

6.37

Isoelectric Point (pI)

42.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 38 - 122 1.8e-15 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 39 - 122 4.1e-11 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 142 - 240 7.7e-06 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 73
AccB1I GGYRCC 1 cut(s) 158
AccI GTMKAC 1 cut(s) 508
AcsI RAATTY 4 cut(s) 224, 365, 537, 803
AcuI CTGAAG 2 cut(s) 189, 740
AcvI CACGTG 1 cut(s) 403
AcyI GRCGYC 1 cut(s) 70
AdeI CACNNNGTG 1 cut(s) 709
AfaI GTAC 1 cut(s) 431
AfiI CCNNNNNNNGG 3 cut(s) 312, 687, 831
AflIII ACRYGT 3 cut(s) 400, 402, 444
AgsI TTSAA 5 cut(s) 27, 212, 603, 650, 675
AjnI CCWGG 1 cut(s) 416
AjuI GAANNNNNNNTTGG 2 cut(s) 713, 745
AluBI AGCT 5 cut(s) 182, 474, 656, 718, 759
AluI AGCT 5 cut(s) 182, 474, 656, 718, 759
Alw26I GTCTC 1 cut(s) 814
AoxI GGCC 2 cut(s) 3, 689
ApeKI GCWGC 1 cut(s) 734
ApoI RAATTY 4 cut(s) 224, 365, 537, 803
AspA2I CCTAGG 1 cut(s) 830
AsuHPI GGTGA 4 cut(s) 94, 179, 189, 799
AvrII CCTAGG 1 cut(s) 830
AxyI CCTNAGG 1 cut(s) 7
BaeI ACNNNNGTAYC 2 cut(s) 413, 446
BanI GGYRCC 1 cut(s) 158
BbrPI CACGTG 1 cut(s) 403
BbvCI CCTCAGC 1 cut(s) 377
BbvI GCAGC 1 cut(s) 721
BccI CCATC 5 cut(s) 67, 208, 293, 376, 700
BcgI CGANNNNNNTGC 2 cut(s) 753, 787
BciT130I CCWGG 1 cut(s) 418
BciVI GTATCC 1 cut(s) 414
BcoDI GTCTC 1 cut(s) 814
BfaI CTAG 1 cut(s) 831
BfmI CTRYAG 1 cut(s) 735
BfuI GTATCC 1 cut(s) 414
BisI GCNGC 1 cut(s) 735
BlnI CCTAGG 1 cut(s) 830
BlsI GCNGC 1 cut(s) 736
BmcAI AGTACT 1 cut(s) 431
Bme1390I CCNGG 1 cut(s) 418
BmiI GGNNCC 2 cut(s) 160, 304
BmrFI CCNGG 1 cut(s) 418
BoxI GACNNNNGTC 1 cut(s) 403
Bpu10I CCTNAGC 1 cut(s) 377
BpuEI CTTGAG 1 cut(s) 159
BsaAI YACGTR 2 cut(s) 403, 706
BsaHI GRCGYC 1 cut(s) 70
BsaI GGTCTC 1 cut(s) 814
BsaJI CCNNGG 1 cut(s) 830
Bsc4I CCNNNNNNNGG 3 cut(s) 312, 687, 831
Bse1I ACTGG 1 cut(s) 414
Bse21I CCTNAGG 1 cut(s) 7
Bse3DI GCAATG 1 cut(s) 543
BseBI CCWGG 1 cut(s) 418
BseDI CCNNGG 1 cut(s) 830
BseGI GGATG 3 cut(s) 304, 387, 692
BseLI CCNNNNNNNGG 3 cut(s) 312, 687, 831
BseMI GCAATG 1 cut(s) 543
BseMII CTCAG 4 cut(s) 78, 368, 417, 804
BseNI ACTGG 1 cut(s) 414
BseRI GAGGAG 1 cut(s) 147
BseXI GCAGC 1 cut(s) 721
BshFI GGCC 2 cut(s) 5, 691
BshNI GGYRCC 1 cut(s) 158
BslFI GGGAC 3 cut(s) 399, 493, 593
BslI CCNNNNNNNGG 3 cut(s) 312, 687, 831
BsmAI GTCTC 1 cut(s) 814
BsmFI GGGAC 3 cut(s) 399, 493, 593
BsnI GGCC 2 cut(s) 5, 691
Bso31I GGTCTC 1 cut(s) 814
BspANI GGCC 2 cut(s) 5, 691
BspCNI CTCAG 4 cut(s) 79, 369, 418, 805
BspLI GGNNCC 2 cut(s) 160, 304
BspMAI CTGCAG 1 cut(s) 739
BspT107I GGYRCC 1 cut(s) 158
BspTNI GGTCTC 1 cut(s) 814
BsrDI GCAATG 1 cut(s) 543
BsrI ACTGG 1 cut(s) 414
BssECI CCNNGG 1 cut(s) 830
BssNI GRCGYC 1 cut(s) 70
BssT1I CCWWGG 1 cut(s) 830
Bst2UI CCWGG 1 cut(s) 418
Bst4CI ACNGT 1 cut(s) 484
BstACI GRCGYC 1 cut(s) 70
BstBAI YACGTR 2 cut(s) 403, 706
BstDEI CTNAG 5 cut(s) 7, 87, 377, 426, 813
BstF5I GGATG 3 cut(s) 304, 387, 692
BstMAI GTCTC 1 cut(s) 814
BstMWI GCNNNNNNNGC 1 cut(s) 743
BstNI CCWGG 1 cut(s) 418
BstNSI RCATGY 1 cut(s) 448
BstPAI GACNNNNGTC 1 cut(s) 403
BstSCI CCNGG 1 cut(s) 416
BstSFI CTRYAG 1 cut(s) 735
BstV1I GCAGC 1 cut(s) 721
Bsu36I CCTNAGG 1 cut(s) 7
BsuI GTATCC 1 cut(s) 414
BsuRI GGCC 2 cut(s) 5, 691
BtsCI GGATG 3 cut(s) 304, 387, 692
BtsIMutI CAGTG 3 cut(s) 407, 797, 810
Csp6I GTAC 1 cut(s) 430
CviAII CATG 5 cut(s) 155, 445, 530, 565, 697
CviQI GTAC 1 cut(s) 430
DdeI CTNAG 5 cut(s) 7, 87, 377, 426, 813
DraIII CACNNNGTG 1 cut(s) 709
Eco130I CCWWGG 1 cut(s) 830
Eco31I GGTCTC 1 cut(s) 814
Eco32I GATATC 1 cut(s) 218
Eco57I CTGAAG 2 cut(s) 189, 740
Eco72I CACGTG 1 cut(s) 403
Eco81I CCTNAGG 1 cut(s) 7
EcoRII CCWGG 1 cut(s) 416
EcoRV GATATC 1 cut(s) 218
EcoT14I CCWWGG 1 cut(s) 830
ErhI CCWWGG 1 cut(s) 830
FaeI CATG 5 cut(s) 158, 448, 533, 568, 700
FalI AAGNNNNNCTT 2 cut(s) 713, 745
FaqI GGGAC 3 cut(s) 399, 493, 593
FatI CATG 5 cut(s) 154, 444, 529, 564, 696
FblI GTMKAC 1 cut(s) 508
Fnu4HI GCNGC 1 cut(s) 735
FokI GGATG 3 cut(s) 311, 394, 679
Fsp4HI GCNGC 1 cut(s) 735
FspBI CTAG 1 cut(s) 831
GluI GCNGC 1 cut(s) 735
HaeIII GGCC 2 cut(s) 5, 691
Hin1I GRCGYC 1 cut(s) 70
Hin1II CATG 5 cut(s) 158, 448, 533, 568, 700
HinfI GANTC 8 cut(s) 23, 47, 387, 413, 599, 700, 770, 779
HphI GGTGA 4 cut(s) 94, 179, 189, 799
Hpy166II GTNNAC 1 cut(s) 509
Hpy188I TCNGA 3 cut(s) 88, 235, 364
Hpy188III TCNNGA 2 cut(s) 66, 221
Hpy8I GTNNAC 1 cut(s) 509
Hpy99I CGWCG 1 cut(s) 72
HpyAV CCTTC 2 cut(s) 634, 715
HpyCH4III ACNGT 1 cut(s) 484
HpyCH4IV ACGT 3 cut(s) 70, 402, 705
HpyCH4V TGCA 4 cut(s) 294, 311, 737, 764
HpyF10VI GCNNNNNNNGC 1 cut(s) 743
HpyF3I CTNAG 5 cut(s) 7, 87, 377, 426, 813
HpySE526I ACGT 3 cut(s) 70, 402, 705
Hsp92I GRCGYC 1 cut(s) 70
Hsp92II CATG 5 cut(s) 158, 448, 533, 568, 700
LpnPI CCDG 9 cut(s) 57, 297, 386, 395, 403, 430, 438, 525, 673
Lsp1109I GCAGC 1 cut(s) 721
MaeI CTAG 1 cut(s) 831
MaeII ACGT 3 cut(s) 70, 402, 705
MaeIII GTNAC 5 cut(s) 167, 405, 701, 709, 795
MboII GAAGA 3 cut(s) 195, 236, 663
MlyI GAGTC 3 cut(s) 56, 381, 709
MmeI TCCRAC 3 cut(s) 265, 471, 705
MnlI CCTC 5 cut(s) 82, 125, 128, 229, 372
MseI TTAA 4 cut(s) 18, 240, 449, 558
MslI CAYNNNNRTG 1 cut(s) 815
MspR9I CCNGG 1 cut(s) 418
MvaI CCWGG 1 cut(s) 418
MwoI GCNNNNNNNGC 1 cut(s) 743
NlaIII CATG 5 cut(s) 158, 448, 533, 568, 700
NlaIV GGNNCC 2 cut(s) 160, 304
NmuCI GTSAC 5 cut(s) 167, 405, 701, 709, 795
NspI RCATGY 1 cut(s) 448
PciI ACATGT 1 cut(s) 444
PfeI GAWTC 5 cut(s) 23, 413, 599, 770, 779
PfoI TCCNGGA 1 cut(s) 416
PkrI GCNGC 1 cut(s) 736
PleI GAGTC 3 cut(s) 55, 381, 708
PmaCI CACGTG 1 cut(s) 403
PmlI CACGTG 1 cut(s) 403
PpsI GAGTC 3 cut(s) 55, 381, 708
Ppu21I YACGTR 2 cut(s) 403, 706
PscI ACATGT 1 cut(s) 444
PshAI GACNNNNGTC 1 cut(s) 403
Psp6I CCWGG 1 cut(s) 416
PspCI CACGTG 1 cut(s) 403
PspGI CCWGG 1 cut(s) 416
PspN4I GGNNCC 2 cut(s) 160, 304
PstI CTGCAG 1 cut(s) 739
RsaI GTAC 1 cut(s) 431
RsaNI GTAC 1 cut(s) 430
RseI CAYNNNNRTG 1 cut(s) 815
SaqAI TTAA 4 cut(s) 18, 240, 449, 558
SatI GCNGC 1 cut(s) 735
ScaI AGTACT 1 cut(s) 431
SchI GAGTC 3 cut(s) 56, 381, 709
ScrFI CCNGG 1 cut(s) 418
SfcI CTRYAG 1 cut(s) 735
SmiMI CAYNNNNRTG 1 cut(s) 815
SmlI CTYRAG 1 cut(s) 174
SmoI CTYRAG 1 cut(s) 174
SspMI CTAG 1 cut(s) 831
StyD4I CCNGG 1 cut(s) 416
StyI CCWWGG 1 cut(s) 830
TaaI ACNGT 1 cut(s) 484
TaiI ACGT 3 cut(s) 73, 405, 708
TaqI TCGA 3 cut(s) 54, 748, 773
TatI WGTACW 1 cut(s) 429
TfiI GAWTC 5 cut(s) 23, 413, 599, 770, 779
Tru1I TTAA 4 cut(s) 18, 240, 449, 558
Tru9I TTAA 4 cut(s) 18, 240, 449, 558
TscAI CASTG 3 cut(s) 414, 804, 817
TseFI GTSAC 5 cut(s) 167, 405, 701, 709, 795
TseI GCWGC 1 cut(s) 734
Tsp45I GTSAC 5 cut(s) 167, 405, 701, 709, 795
TspDTI ATGAA 5 cut(s) 218, 248, 339, 468, 553
TspRI CASTG 3 cut(s) 414, 804, 817
XapI RAATTY 4 cut(s) 224, 365, 537, 803
XceI RCATGY 1 cut(s) 448
XmaJI CCTAGG 1 cut(s) 830
XmiI GTMKAC 1 cut(s) 508
XspI CTAG 1 cut(s) 831
ZraI GACGTC 1 cut(s) 71
ZrmI AGTACT 1 cut(s) 431
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.