AT5G59650

leucine-rich repeat protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0000083
Physical Location & Seq
Forward (+)
24031346 .. 24035399
4054 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G59650.2

Sequence Viewer

Length: 2655 bp
ATGGATAGTCCTTGTTGGCTTTTGCTGCTGCTATTAGGAGCTTTTGCCATTATTGGTTGTGTTCAAGCTCAGGATCAACAAGAGTTTATCAGTTTGGATTGCGGGTTACCCATGACTGAACCGTCTTCTTATACTGAGTCAGTAACCGGACTACGGTTCTCGTCTGATGCTGAATTCATCCAGACTGGTGAAAGTGGTAAAATCCAGGCGAGTATGGAGAATGACTACCTTAAGCCGTACACGAGGCTGAGGTATTTTCCAGAGGAGAGAAGGAACTGCTATAGTTTGAGTGTTGACAAGAACAGGAAATATTTGATCAGGGCTAGGTTCATTTATGGGAATTACGATGGTCGTAACTCTAACCCGATATTTGAACTGCATCTAGGACCTAATCTGTGGGCAACTATAGATTTGCAAAAGTTTGTGAATGGTACAATGGAGGAGATCCTTCACACTCCAACATCAAACTCTTTGAACGTTTGTCTTGTTAAGACAGGGACAACTACACCCTTGATCTCAGCCTTGGAATTACGGCCATTAGGAAATAATTCTTATCTCACAGATGGTTCTTTGAATCTTTTCGTTCGGATATATCTCAACAAGACAGATGGCTTTCTTCGGTACCCGGATGATATTTATGATCGCAGATGGCATAATTACTTTATGGTGGATGATTGGACCCAAATTTTCACCACTCTCGAAGTGACCAATGATAACAATTATGAACCACCAAAAAAGGCTCTTGCAGCGGCTGCCACGCCTTCTAATGCCAGCGCGCCATTGACAATCAGTTGGCCACCAGACAATCCTGGTGACCAATATTACTTGTACAGCCACTTCTCTGAGATACAAGATTTACAGACCAATGATACCAGAGAATTTGACATATTATGGGATGGAGCTGTTGTTGAAGAAGGTTTCATCCCTCCAAAGTTAGGGGTGACTACTATCCATAATCTTTCTCCAGTGACATGCAAAGGAGAAAATTGCATTTACCAGCTAATAAAAACCTCGAGGTCAACTCTTCCTTCTCTACTTAACGCTCTTGAAATCTACACAGTTATCCAATTTCCACGGTCGGAAACAAATGAAAATGATGTGGTTGCTGTTAAAAATATCGAAGCTGCCTATAAATTGAGTAGAATCAGGTGGCAAGGAGATCCTTGCGTCCCTCAAAAGTATGCGTGGGATGGTTTGAACTGTAGCAACAACACAGATGTTTCTAAACCTCCAAGAGTATTATCCTTAAATTTGTCTTCGAGCGGTTTAACTGGAATCATTGCGGCCGCAATTCAAAACCTTACACATTTAGAAAAACTGGACTTGTCAAATAACACACTAACTGGAGTGGTGCCGGAATTTCTAGCCCAGATGAAATCGTTGGTGATCATAAACTTAAGCGGCAACAATCTTAGTGGTCCCCTTCCTCAAGGTCTTCGAAGAGAGGGACTAGAATTACTAGTTCAAGGCAACCCAAGGCTTTGTCTCTCTGGTTCCTGCACAGAAAAAAACTCGAAGAAGAAATTCCCGGTGGTGATTGTTGCATCAGTTGCTTCTGTGGCCATAATTGTTGCTGTGTTGGTTATTATTTTTGTTCTCAGTAAGAAAAAGTCATCTACTGTGGGAGCTCTACAACCTCCACTGAGTATGCCAATGGTTCATGATAATTCACCTGAACCATCAATCGAGACGAAAAAGAGAAGGTTTACTTATTCAGAGGTTATCAAAATGACGAATAATTTTCAAAGAGTTGTAGGGGAAGGAGGATTCGGTGTTGTTTGTCATGGTACTATAAATGGTTCTGAACAGGTGGCTGTTAAAGTTCTCTCTCAATCATCAAGTCAAGGATATAAGCATTTTAAGGCAGAGGTTGATCTTCTTCTACGAGTTCACCATACAAATTTGGTGAGTCTTGTTGGATATTGCGATGAAAGAGATCACTTGGCTCTCATCTATGAGTTTTTGCCCAAGGGAGACTTAAGACAACATCTATCTGGAAAAAGCGGTGGGTCCTTTATCAACTGGGGTAATCGTCTACGAATAGCTCTGGAGGCTGCACTAGGATTGGAATATCTACATTCTGGATGCACACCACCAATTGTACATAGAGATATAAAAACGACAAACATATTGCTGGACGAACAGTTAAAGGCCAAGCTTGCCGATTTCGGCCTTTCGAGATCTTTCCCTATTGGAGGTGAAACACATATTTCAACTGTGGTTGCTGGTACTCCTGGATACCTTGATCCTGAATATTACCAGACAACTCGACTGGGTGAGAAGAGCGATGTGTACAGCTTCGGAATTGTGTTATTGGAGATTATCACAAACCAACCTGTGATTGACCAGTCCCGTTCAAAGTCTCACATATCACAATGGGTTGGATTTGAGCTTACCCGAGGAGATATTACTAAGATCATGGATCCAAACCTGAACGGGGATTACGAATCTCGTTCTGTATGGAGAGTTCTTGAACTGGCAATGTCGTGTGCGAATCCTTCTTCTGTGAACCGACCAAACATGTCCCAAGTTGCTAATGAACTGAAAGAATGTCTTGTTTCTGAAAACTTGAGGGAAAATATGAATATGGACTCTCAGAATTCTCTTAAAGTGAGCATGAGCTTTGACACAGAGTTGTTTCCGAGGGCAAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001653 GO:0002229 GO:0002237 GO:0002238 GO:0002239 GO:0002376 GO:0002831 GO:0002832 GO:0002833 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009787 GO:0009788 GO:0009790 GO:0009791 GO:0009793 GO:0009845 GO:0009888 GO:0009960 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010154 GO:0010200 GO:0010243 GO:0010646 GO:0010648 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0023051 GO:0023052 GO:0023057 GO:0031347 GO:0031348 GO:0031349 GO:0032101 GO:0032102 GO:0032103 GO:0032501 GO:0032502 GO:0032879 GO:0036211 GO:0038023 GO:0042221 GO:0042493 GO:0042802 GO:0042803 GO:0042995 GO:0043170 GO:0043207 GO:0043412 GO:0043900 GO:0043901 GO:0043902 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0046777 GO:0046983 GO:0048316 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0061458 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0090351 GO:0090406 GO:0098542 GO:0120025 GO:0140096 GO:1900150 GO:1900424 GO:1900426 GO:1901419 GO:1901420 GO:1901564 GO:1901698 GO:1901700 GO:1902288 GO:1902289 GO:1905957 GO:1905958 GO:2000071
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

884

Amino Acids

98.53

Weight (kDa)

5.94

Isoelectric Point (pI)

41.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 32 - 354 4.9e-122 Malectin-like domain
LRR_8 PF13855 421 - 479 3.6e-11 Leucine rich repeat
LRR_4 PF12799 443 - 483 1.8e-06 Leucine Rich repeats (2 copies)
PK_Tyr_Ser-Thr PF07714 589 - 856 5e-43 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 590 - 853 2.9e-43 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 121
AbsI CCTCGAGG 1 cut(s) 1012
Acc65I GGTACC 1 cut(s) 621
AccB1I GGYRCC 2 cut(s) 621, 1351
AccBSI CCGCTC 1 cut(s) 1263
AccI GTMKAC 1 cut(s) 2035
AccII CGCG 1 cut(s) 776
AciI CCGC 7 cut(s) 102, 749, 1263, 1283, 1287, 1401, 2004
AclI AACGTT 1 cut(s) 477
AclWI GGATC 6 cut(s) 81, 439, 1154, 2240, 2417, 2430
AcoI YGGCCR 4 cut(s) 533, 794, 1284, 1560
AcsI RAATTY 8 cut(s) 173, 684, 878, 1249, 1358, 1523, 1900, 2599
AfaI GTAC 8 cut(s) 239, 433, 623, 830, 1789, 2103, 2230, 2294
AfiI CCNNNNNNNGG 4 cut(s) 153, 935, 2195, 2437
AflII CTTAAG 3 cut(s) 230, 1396, 1978
AflIII ACRYGT 1 cut(s) 2520
AhlI ACTAGT 1 cut(s) 1459
AjnI CCWGG 3 cut(s) 204, 808, 2233
Alw21I GWGCWC 1 cut(s) 1630
Alw26I GTCTC 4 cut(s) 1490, 1682, 1968, 2367
AlwI GGATC 6 cut(s) 81, 439, 1154, 2240, 2417, 2430
AlwNI CAGNNNCTG 1 cut(s) 752
Ama87I CYCGRG 2 cut(s) 1012, 2397
AoxI GGCC 6 cut(s) 533, 794, 1284, 1560, 2151, 2170
ApeKI GCWGC 6 cut(s) 25, 28, 746, 752, 1124, 2054
ApoI RAATTY 8 cut(s) 173, 684, 878, 1249, 1358, 1523, 1900, 2599
Asp700I GAANNNNTTC 3 cut(s) 547, 578, 1523
Asp718I GGTACC 1 cut(s) 621
AspLEI GCGC 2 cut(s) 776, 778
AspS9I GGNCC 4 cut(s) 386, 678, 1418, 2010
AsuC2I CCSGG 2 cut(s) 626, 1529
AsuII TTCGAA 1 cut(s) 1438
AvaI CYCGRG 2 cut(s) 1012, 2397
AvaII GGWCC 4 cut(s) 386, 678, 1418, 2010
BalI TGGCCA 2 cut(s) 796, 1562
BamHI GGATCC 1 cut(s) 2422
BanI GGYRCC 2 cut(s) 621, 1351
BanII GRGCYC 1 cut(s) 1630
BarI GAAGNNNNNNTAC 2 cut(s) 821, 853
BauI CACGAG 1 cut(s) 241
BbsI GAAGAC 3 cut(s) 117, 1248, 1427
Bbv12I GWGCWC 1 cut(s) 1630
BbvCI CCTCAGC 1 cut(s) 248
BbvI GCAGC 6 cut(s) 12, 15, 739, 758, 1111, 2041
BccI CCATC 7 cut(s) 341, 557, 602, 642, 890, 1184, 1687
BceAI ACGGC 2 cut(s) 220, 548
BciT130I CCWGG 3 cut(s) 206, 810, 2235
BciVI GTATCC 1 cut(s) 2231
BclI TGATCA 2 cut(s) 315, 1386
BcnI CCSGG 2 cut(s) 626, 1529
BcoDI GTCTC 4 cut(s) 1490, 1682, 1968, 2367
BcuI ACTAGT 1 cut(s) 1459
BfaI CTAG 6 cut(s) 324, 383, 1364, 1451, 1460, 2060
BfmI CTRYAG 3 cut(s) 280, 405, 1201
BfrI CTTAAG 3 cut(s) 230, 1396, 1978
BfuI GTATCC 1 cut(s) 2231
BglII AGATCT 1 cut(s) 2180
Bme1390I CCNGG 5 cut(s) 206, 626, 810, 1529, 2235
Bme18I GGWCC 4 cut(s) 386, 678, 1418, 2010
BmeT110I CYCGRG 2 cut(s) 1012, 2397
BmgT120I GGNCC 4 cut(s) 386, 678, 1418, 2010
BmiI GGNNCC 7 cut(s) 623, 680, 1353, 1420, 1495, 2011, 2424
BmrFI CCNGG 5 cut(s) 206, 626, 810, 1529, 2235
BmrI ACTGGG 2 cut(s) 2032, 2282
BmsI GCATC 4 cut(s) 157, 388, 1553, 2075
BmuI ACTGGG 2 cut(s) 2032, 2282
BpiI GAAGAC 3 cut(s) 117, 1248, 1427
BplI GAGNNNNNCTC 2 cut(s) 1006, 1038
BpmI CTGGAG 3 cut(s) 948, 1365, 2069
Bpu10I CCTNAGC 2 cut(s) 69, 248
Bpu14I TTCGAA 1 cut(s) 1438
BpuEI CTTGAG 2 cut(s) 1413, 2590
BpuMI CCSGG 2 cut(s) 626, 1529
BsaJI CCNNGG 6 cut(s) 522, 1073, 1475, 1968, 2398, 2642
BsaWI WCCGGW 1 cut(s) 146
BsaXI ACNNNNNCTCC 2 cut(s) 891, 921
Bsc4I CCNNNNNNNGG 4 cut(s) 153, 935, 2195, 2437
Bse1I ACTGG 9 cut(s) 190, 965, 1276, 1323, 1348, 2027, 2277, 2347, 2481
Bse3DI GCAATG 2 cut(s) 1278, 2487
BseBI CCWGG 3 cut(s) 206, 810, 2235
BseDI CCNNGG 6 cut(s) 522, 1073, 1475, 1968, 2398, 2642
BseGI GGATG 7 cut(s) 177, 634, 676, 901, 921, 1195, 2090
BseLI CCNNNNNNNGG 4 cut(s) 153, 935, 2195, 2437
BseMI GCAATG 2 cut(s) 1278, 2487
BseMII CTCAG 8 cut(s) 83, 126, 239, 531, 834, 1612, 1634, 2609
BseNI ACTGG 9 cut(s) 190, 965, 1276, 1323, 1348, 2027, 2277, 2347, 2481
BsePI GCGCGC 1 cut(s) 774
BseRI GAGGAG 3 cut(s) 278, 455, 2415
BseX3I CGGCCG 1 cut(s) 1284
BseXI GCAGC 6 cut(s) 12, 15, 739, 758, 1111, 2041
BsgI GTGCAG 2 cut(s) 1483, 2040
Bsh1236I CGCG 1 cut(s) 776
Bsh1285I CGRYCG 2 cut(s) 1079, 1287
BshFI GGCC 6 cut(s) 535, 796, 1286, 1562, 2153, 2172
BshNI GGYRCC 2 cut(s) 621, 1351
BsiEI CGRYCG 2 cut(s) 1079, 1287
BsiHKAI GWGCWC 1 cut(s) 1630
BsiHKCI CYCGRG 2 cut(s) 1012, 2397
BsiSI CCGG 4 cut(s) 147, 626, 1355, 1529
BslFI GGGAC 6 cut(s) 511, 1154, 1404, 1461, 2335, 2509
BslI CCNNNNNNNGG 4 cut(s) 153, 935, 2195, 2437
BsmAI GTCTC 4 cut(s) 1490, 1682, 1968, 2367
BsmBI CGTCTC 1 cut(s) 1682
BsmFI GGGAC 6 cut(s) 511, 1154, 1404, 1461, 2335, 2509
BsnI GGCC 6 cut(s) 535, 796, 1286, 1562, 2153, 2172
BsoBI CYCGRG 2 cut(s) 1012, 2397
Bsp119I TTCGAA 1 cut(s) 1438
Bsp1286I GDGCHC 1 cut(s) 1630
Bsp1407I TGTACA 3 cut(s) 828, 2101, 2292
BspACI CCGC 7 cut(s) 102, 749, 1263, 1283, 1287, 1401, 2004
BspANI GGCC 6 cut(s) 535, 796, 1286, 1562, 2153, 2172
BspCNI CTCAG 8 cut(s) 82, 127, 240, 530, 835, 1611, 1635, 2608
BspFNI CGCG 1 cut(s) 776
BspHI TCATGA 1 cut(s) 1660
BspLI GGNNCC 7 cut(s) 623, 680, 1353, 1420, 1495, 2011, 2424
BspPI GGATC 6 cut(s) 81, 439, 1154, 2240, 2417, 2430
BspQI GCTCTTC 1 cut(s) 2276
BspT104I TTCGAA 1 cut(s) 1438
BspT107I GGYRCC 2 cut(s) 621, 1351
BspTI CTTAAG 3 cut(s) 230, 1396, 1978
BsrBI CCGCTC 1 cut(s) 1263
BsrDI GCAATG 2 cut(s) 1278, 2487
BsrGI TGTACA 3 cut(s) 828, 2101, 2292
BsrI ACTGG 9 cut(s) 190, 965, 1276, 1323, 1348, 2027, 2277, 2347, 2481
BssECI CCNNGG 6 cut(s) 522, 1073, 1475, 1968, 2398, 2642
BssHII GCGCGC 1 cut(s) 774
BssSI CACGAG 1 cut(s) 241
BssT1I CCWWGG 3 cut(s) 522, 1475, 1968
Bst2BI CACGAG 1 cut(s) 241
Bst2UI CCWGG 3 cut(s) 206, 810, 2235
Bst4CI ACNGT 8 cut(s) 123, 156, 1060, 1077, 1202, 1621, 2145, 2218
Bst6I CTCTTC 3 cut(s) 1029, 1435, 2276
BstAFI CTTAAG 3 cut(s) 230, 1396, 1978
BstAPI GCANNNNNTGC 2 cut(s) 752, 1550
BstAUI TGTACA 3 cut(s) 828, 2101, 2292
BstBI TTCGAA 1 cut(s) 1438
BstC8I GCNNGC 3 cut(s) 772, 776, 2160
BstDSI CCRYGG 1 cut(s) 1073
BstEII GGTNACC 2 cut(s) 105, 812
BstENI CCTNNNNNAGG 1 cut(s) 2193
BstF5I GGATG 7 cut(s) 177, 634, 676, 901, 921, 1195, 2090
BstFNI CGCG 1 cut(s) 776
BstHHI GCGC 2 cut(s) 776, 778
BstMAI GTCTC 4 cut(s) 1490, 1682, 1968, 2367
BstMCI CGRYCG 2 cut(s) 1079, 1287
BstMWI GCNNNNNNNGC 7 cut(s) 25, 746, 752, 1550, 1559, 2051, 2159
BstNI CCWGG 3 cut(s) 206, 810, 2235
BstNSI RCATGY 2 cut(s) 975, 2524
BstPI GGTNACC 2 cut(s) 105, 812
BstSCI CCNGG 5 cut(s) 204, 624, 808, 1527, 2233
BstSFI CTRYAG 3 cut(s) 280, 405, 1201
BstUI CGCG 1 cut(s) 776
BstV1I GCAGC 6 cut(s) 12, 15, 739, 758, 1111, 2041
BstV2I GAAGAC 3 cut(s) 117, 1248, 1427
BstX2I RGATCY 4 cut(s) 444, 1159, 2180, 2422
BstYI RGATCY 4 cut(s) 444, 1159, 2180, 2422
BstZI CGGCCG 1 cut(s) 1284
BsuI GTATCC 1 cut(s) 2231
BsuRI GGCC 6 cut(s) 535, 796, 1286, 1562, 2153, 2172
BtgI CCRYGG 1 cut(s) 1073
BtgZI GCGATG 2 cut(s) 1941, 2301
BtsCI GGATG 7 cut(s) 177, 634, 676, 901, 921, 1195, 2090
BtsIMutI CAGTG 2 cut(s) 972, 1640
Cac8I GCNNGC 3 cut(s) 772, 776, 2160
CaiI CAGNNNCTG 1 cut(s) 752
CciI TCATGA 1 cut(s) 1660
CciNI GCGGCCGC 1 cut(s) 1284
CfoI GCGC 2 cut(s) 776, 778
Cfr13I GGNCC 4 cut(s) 386, 678, 1418, 2010
CseI GACGC 1 cut(s) 1156
Csp6I GTAC 8 cut(s) 238, 432, 622, 829, 1788, 2102, 2229, 2293
CspCI CAANNNNNGTGG 2 cut(s) 1396, 1431
CviAII CATG 7 cut(s) 112, 972, 1661, 1784, 2419, 2521, 2617
CviQI GTAC 8 cut(s) 238, 432, 622, 829, 1788, 2102, 2229, 2293
DrdI GACNNNNNNGTC 1 cut(s) 121
DseDI GACNNNNNNGTC 1 cut(s) 121
EaeI YGGCCR 4 cut(s) 533, 794, 1284, 1560
EagI CGGCCG 1 cut(s) 1284
Eam1104I CTCTTC 3 cut(s) 1029, 1435, 2276
EarI CTCTTC 3 cut(s) 1029, 1435, 2276
Ecl136II GAGCTC 1 cut(s) 1628
EclXI CGGCCG 1 cut(s) 1284
Eco130I CCWWGG 3 cut(s) 522, 1475, 1968
Eco24I GRGCYC 1 cut(s) 1630
Eco47I GGWCC 4 cut(s) 386, 678, 1418, 2010
Eco52I CGGCCG 1 cut(s) 1284
Eco53kI GAGCTC 1 cut(s) 1628
Eco88I CYCGRG 2 cut(s) 1012, 2397
Eco91I GGTNACC 2 cut(s) 105, 812
EcoICRI GAGCTC 1 cut(s) 1628
EcoNI CCTNNNNNAGG 1 cut(s) 2193
EcoO109I RGGNCCY 2 cut(s) 386, 2010
EcoO65I GGTNACC 2 cut(s) 105, 812
EcoRI GAATTC 2 cut(s) 173, 2599
EcoRII CCWGG 3 cut(s) 204, 808, 2233
EcoT14I CCWWGG 3 cut(s) 522, 1475, 1968
EcoT38I GRGCYC 1 cut(s) 1630
ErhI CCWWGG 3 cut(s) 522, 1475, 1968
Esp3I CGTCTC 1 cut(s) 1682
FaeI CATG 7 cut(s) 115, 975, 1664, 1787, 2422, 2524, 2620
FalI AAGNNNNNCTT 6 cut(s) 1693, 1725, 1961, 1993, 2538, 2570
FaqI GGGAC 6 cut(s) 511, 1154, 1404, 1461, 2335, 2509
FatI CATG 7 cut(s) 111, 971, 1660, 1783, 2418, 2520, 2616
FauI CCCGC 1 cut(s) 95
FbaI TGATCA 2 cut(s) 315, 1386
FblI GTMKAC 1 cut(s) 2035
FokI GGATG 7 cut(s) 164, 641, 683, 908, 908, 1202, 2097
FriOI GRGCYC 1 cut(s) 1630
FspBI CTAG 6 cut(s) 324, 383, 1364, 1451, 1460, 2060
GlaI GCGC 2 cut(s) 775, 777
GsuI CTGGAG 3 cut(s) 948, 1365, 2069
HaeIII GGCC 6 cut(s) 535, 796, 1286, 1562, 2153, 2172
HapII CCGG 4 cut(s) 147, 626, 1355, 1529
HgaI GACGC 1 cut(s) 1156
HhaI GCGC 2 cut(s) 776, 778
Hin1II CATG 7 cut(s) 115, 975, 1664, 1787, 2422, 2524, 2620
Hin6I GCGC 2 cut(s) 774, 776
HinP1I GCGC 2 cut(s) 774, 776
HincII GTYRAC 2 cut(s) 295, 1020
HindII GTYRAC 2 cut(s) 295, 1020
HindIII AAGCTT 1 cut(s) 2156
HinfI GANTC 9 cut(s) 137, 574, 1143, 1275, 1767, 1909, 2447, 2494, 2591
HpaII CCGG 4 cut(s) 147, 626, 1355, 1529
Hpy166II GTNNAC 8 cut(s) 240, 295, 1020, 1707, 1891, 2036, 2293, 2509
Hpy8I GTNNAC 8 cut(s) 240, 295, 1020, 1707, 1891, 2036, 2293, 2509
HpyAV CCTTC 9 cut(s) 264, 458, 771, 908, 1038, 1433, 1695, 1754, 2508
HpyCH4III ACNGT 8 cut(s) 123, 156, 1060, 1077, 1202, 1621, 2145, 2218
HpyCH4IV ACGT 1 cut(s) 477
HpyCH4V TGCA 9 cut(s) 379, 415, 746, 975, 990, 1500, 1544, 2057, 2088
HpyF10VI GCNNNNNNNGC 7 cut(s) 25, 746, 752, 1550, 1559, 2051, 2159
HpySE526I ACGT 1 cut(s) 477
Hsp92II CATG 7 cut(s) 115, 975, 1664, 1787, 2422, 2524, 2620
HspAI GCGC 2 cut(s) 774, 776
KpnI GGTACC 1 cut(s) 625
Ksp22I TGATCA 2 cut(s) 315, 1386
LguI GCTCTTC 1 cut(s) 2276
LmnI GCTCC 3 cut(s) 38, 899, 1625
Lsp1109I GCAGC 6 cut(s) 12, 15, 739, 758, 1111, 2041
LweI GCATC 4 cut(s) 157, 388, 1553, 2075
MaeI CTAG 6 cut(s) 324, 383, 1364, 1451, 1460, 2060
MaeII ACGT 1 cut(s) 477
MaeIII GTNAC 7 cut(s) 105, 142, 353, 703, 812, 940, 967
MbiI CCGCTC 1 cut(s) 1263
MfeI CAATTG 1 cut(s) 2097
MflI RGATCY 4 cut(s) 444, 1159, 2180, 2422
MhlI GDGCHC 1 cut(s) 1630
MlsI TGGCCA 2 cut(s) 796, 1562
MluNI TGGCCA 2 cut(s) 796, 1562
MlyI GAGTC 3 cut(s) 146, 1918, 2585
MmeI TCCRAC 4 cut(s) 482, 1059, 1897, 2362
Mox20I TGGCCA 2 cut(s) 796, 1562
MroXI GAANNNNTTC 3 cut(s) 547, 578, 1523
MscI TGGCCA 2 cut(s) 796, 1562
Msp20I TGGCCA 2 cut(s) 796, 1562
MspA1I CMGCKG 1 cut(s) 749
MspCI CTTAAG 3 cut(s) 230, 1396, 1978
MspI CCGG 4 cut(s) 147, 626, 1355, 1529
MspR9I CCNGG 5 cut(s) 206, 626, 810, 1529, 2235
MunI CAATTG 1 cut(s) 2097
MvaI CCWGG 3 cut(s) 206, 810, 2235
MvnI CGCG 1 cut(s) 776
MwoI GCNNNNNNNGC 7 cut(s) 25, 746, 752, 1550, 1559, 2051, 2159
NciI CCSGG 2 cut(s) 626, 1529
NlaIII CATG 7 cut(s) 115, 975, 1664, 1787, 2422, 2524, 2620
NlaIV GGNNCC 7 cut(s) 623, 680, 1353, 1420, 1495, 2011, 2424
NmuCI GTSAC 4 cut(s) 703, 812, 940, 967
NotI GCGGCCGC 1 cut(s) 1284
NspI RCATGY 2 cut(s) 975, 2524
NspV TTCGAA 1 cut(s) 1438
PaeR7I CTCGAG 1 cut(s) 1012
PagI TCATGA 1 cut(s) 1660
PauI GCGCGC 1 cut(s) 774
PciI ACATGT 1 cut(s) 2520
PciSI GCTCTTC 1 cut(s) 2276
PcsI WCGNNNNNNNCGW 1 cut(s) 2442
PdmI GAANNNNTTC 3 cut(s) 547, 578, 1523
PfeI GAWTC 6 cut(s) 574, 1143, 1275, 1767, 2447, 2494
PfoI TCCNGGA 1 cut(s) 2233
PleI GAGTC 3 cut(s) 145, 1917, 2585
PpsI GAGTC 3 cut(s) 145, 1917, 2585
PpuMI RGGWCCY 2 cut(s) 386, 2010
PscI ACATGT 1 cut(s) 2520
Psp124BI GAGCTC 1 cut(s) 1630
Psp1406I AACGTT 1 cut(s) 477
Psp5II RGGWCCY 2 cut(s) 386, 2010
Psp6I CCWGG 3 cut(s) 204, 808, 2233
PspEI GGTNACC 2 cut(s) 105, 812
PspGI CCWGG 3 cut(s) 204, 808, 2233
PspN4I GGNNCC 7 cut(s) 623, 680, 1353, 1420, 1495, 2011, 2424
PspPI GGNCC 4 cut(s) 386, 678, 1418, 2010
PspPPI RGGWCCY 2 cut(s) 386, 2010
PspXI VCTCGAGB 1 cut(s) 1012
PsrI GAACNNNNNNTAC 4 cut(s) 2426, 2451, 2458, 2483
PstNI CAGNNNCTG 1 cut(s) 752
PsuI RGATCY 4 cut(s) 444, 1159, 2180, 2422
PteI GCGCGC 1 cut(s) 774
RsaI GTAC 8 cut(s) 239, 433, 623, 830, 1789, 2103, 2230, 2294
RsaNI GTAC 8 cut(s) 238, 432, 622, 829, 1788, 2102, 2229, 2293
SacI GAGCTC 1 cut(s) 1630
SapI GCTCTTC 1 cut(s) 2276
Sau96I GGNCC 4 cut(s) 386, 678, 1418, 2010
SchI GAGTC 3 cut(s) 146, 1918, 2585
ScrFI CCNGG 5 cut(s) 206, 626, 810, 1529, 2235
SduI GDGCHC 1 cut(s) 1630
SfaNI GCATC 4 cut(s) 157, 388, 1553, 2075
SfcI CTRYAG 3 cut(s) 280, 405, 1201
Sfr274I CTCGAG 1 cut(s) 1012
SfuI TTCGAA 1 cut(s) 1438
SinI GGWCC 4 cut(s) 386, 678, 1418, 2010
SlaI CTCGAG 1 cut(s) 1012
SmlI CTYRAG 6 cut(s) 230, 1012, 1396, 1428, 1978, 2569
SmoI CTYRAG 6 cut(s) 230, 1012, 1396, 1428, 1978, 2569
SpeI ACTAGT 1 cut(s) 1459
SsiI CCGC 7 cut(s) 102, 749, 1263, 1283, 1287, 1401, 2004
SspI AATATT 3 cut(s) 311, 821, 2255
SspMI CTAG 6 cut(s) 324, 383, 1364, 1451, 1460, 2060
SstI GAGCTC 1 cut(s) 1630
StyD4I CCNGG 5 cut(s) 204, 624, 808, 1527, 2233
StyI CCWWGG 3 cut(s) 522, 1475, 1968
TaaI ACNGT 8 cut(s) 123, 156, 1060, 1077, 1202, 1621, 2145, 2218
TaiI ACGT 1 cut(s) 480
TaqI TCGA 9 cut(s) 699, 1013, 1119, 1259, 1438, 1514, 1686, 2177, 2269
TatI WGTACW 3 cut(s) 828, 2101, 2292
TauI GCSGC 4 cut(s) 752, 1286, 1289, 1404
TfiI GAWTC 6 cut(s) 574, 1143, 1275, 1767, 2447, 2494
TscAI CASTG 2 cut(s) 972, 1647
TseFI GTSAC 4 cut(s) 703, 812, 940, 967
TseI GCWGC 6 cut(s) 25, 28, 746, 752, 1124, 2054
Tsp45I GTSAC 4 cut(s) 703, 812, 940, 967
TspRI CASTG 2 cut(s) 972, 1647
Vha464I CTTAAG 3 cut(s) 230, 1396, 1978
VpaK11BI GGWCC 4 cut(s) 386, 678, 1418, 2010
XagI CCTNNNNNAGG 1 cut(s) 2193
XapI RAATTY 8 cut(s) 173, 684, 878, 1249, 1358, 1523, 1900, 2599
XceI RCATGY 2 cut(s) 975, 2524
XhoI CTCGAG 1 cut(s) 1012
XmiI GTMKAC 1 cut(s) 2035
XmnI GAANNNNTTC 3 cut(s) 547, 578, 1523
XspI CTAG 6 cut(s) 324, 383, 1364, 1451, 1460, 2060
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.