Rmu_sc0005507.1_g000047

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005507.1
OG0000083
Physical Location & Seq
Forward (+)
200553 .. 204404
3852 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005507.1_g000047.1.cds

Sequence Viewer

Length: 2211 bp
atgtcagggattttcaagcaattcctggctccactgcttgctggttttgctcttatgctcttagttcatgcgcaggatcaaacaggcttcatcagcatagattgcggccttgcggagaattccacctattctgaaaagaaaacaaccatcgactacatttcagatgcaaccttcatagacactggtgaaagaaagttggtattgcctgaaaacagaaacggctaccaacagccttactggtctcttaggagttttcctcaaggaaccaggaactgctacaaaataaatgttaaaagtggcaccagatacttgatcagagccagtttcttttatgggaactatgatggagaaaacaaattgccagagtttgaactacatcttggatctaatttgtgggacttggtcagtctggaagatgcatccagttccacaagcaaggagctcatacattatgtcccagctaagagaaactatctacatatttgtgttgtggaaaaaggctccggggttccatttatatcaacaatagaactgaggcctttgccgtatagtacttatcaaacacaaacagggtccttggcacttgatacacgacttgacactggtcaaatagcacctaatctaactgcatataggtatccattcgatatgcatgatcgattctggtacagtcatagccgagaagattggacacaattaagtaccgcatcgaccattgacctcaatcaaaacgacttttaccagccagcatctgatgttatgcgtactgctgccacgccgaaacttgcaactgatgacttgagtttcttctggctgcctgcttataaaaatgcagaatattatgtttacatgcactttgcagaaattgaagaactctcagctaaccagtctagacagcttgaaattaccatgaacggagaactgttttatggaccatttgctcctggttacttgaagacatttactgtttggagcactaaggcaatgagtggaggacaatacaacttttcagtcataaagggagctggcaactctgaccttcaacctatccttaatgccatcgagatttatacagtaaaagaattctcagaacaagaaacaaaccaagatgatgttaacgcaatcacaaatatcaaagtagcatataaaattgagaagaattggcaaggagatccatgtttcccaaagaattactcatggaaaggtctcaactgtagctattctccaaatgattcaccgagaatcatatacttggacttgtcatcgagtggattaacaggggaaatagatgcttctatatccaatctcgcaatgatacagactttggacttatctaacaacaacttaacaggaccaattccggacttcttgtctcaaatgtcaaatttaaatgtcataaacttggagaacaacaagctcacaggctcagttccaaatgaacttactgaaagagcaaaaaatggtttactatcattaagtttgtgcgacaatccaaatctatctgtaaatgtttcttgcaaaaaaaagaagaagcagagtttcagttcaaatatcttgacttgggacggtagacttcaagtagcaacagacgctgcacaaggattggagtatctacactatggttgtaaacctcctatgatccatagggatgtgaaaacaacaaacatcttgctatcagaaaatttccaagccaaactctctgatttcggcctctctagaaatttccctgcaggcgatgggactcatatagttacaggtgttgctggaacccctggctacctagcacccgagtataaacaactaaataggttcaatgagaagagtgacgtctatagctttgggattgtactgctggagattatcacaggtagacctgctgtttcgaggacacgagagagaattgccatcaatgaatgggttggatcaatcattccaaaaggagacattgacaccattgtggatcagaggttaaaaggaatattcaatgtcagctctgcctggaaagtagtggaaatagcaatggcatgtgtctctccagagaccaataaaaggccaaccatgagtagagttgttggagaactgaagcagtgtctggaaacacaactgtctcaaagaaaccaggacagctatgaaactgaactagggaattcctttcagattgtgtctcataacggttattcaatcactatgctacgtccctcagttagatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

736

Amino Acids

82.6

Weight (kDa)

5.71

Isoelectric Point (pI)

40.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 825
AatII GACGTC 1 cut(s) 1830
Acc16I TGCGCA 1 cut(s) 72
Acc36I ACCTGC 1 cut(s) 1882
AccB1I GGYRCC 1 cut(s) 299
AccI GTMKAC 2 cut(s) 1570, 1870
AccIII TCCGGA 1 cut(s) 1360
AciI CCGC 3 cut(s) 105, 113, 705
AclWI GGATC 6 cut(s) 84, 391, 1166, 1633, 1930, 1968
AcsI RAATTY 6 cut(s) 118, 1082, 1384, 1681, 1720, 2146
AcuI CTGAAG 1 cut(s) 2102
AcyI GRCGYC 1 cut(s) 1827
AfaI GTAC 5 cut(s) 553, 668, 703, 766, 1848
AfiI CCNNNNNNNGG 1 cut(s) 2049
AhdI GACNNNNNGTC 1 cut(s) 1369
AjnI CCWGG 6 cut(s) 24, 266, 943, 1771, 1997, 2118
AjuI GAANNNNNNNTTGG 2 cut(s) 363, 395
AleI CACNNNNGTG 1 cut(s) 1955
Alw21I GWGCWC 2 cut(s) 444, 977
Alw26I GTCTC 8 cut(s) 246, 1211, 1377, 1935, 2033, 2035, 2112, 2169
AlwI GGATC 6 cut(s) 84, 391, 1166, 1633, 1930, 1968
AlwNI CAGNNNCTG 4 cut(s) 273, 752, 1592, 2092
Ama87I CYCGRG 1 cut(s) 1787
Aor13HI TCCGGA 1 cut(s) 1360
AoxI GGCC 4 cut(s) 106, 536, 1708, 2051
ApeKI GCWGC 3 cut(s) 770, 814, 1592
ApoI RAATTY 6 cut(s) 118, 1082, 1384, 1681, 1720, 2146
AspLEI GCGC 1 cut(s) 73
AspS9I GGNCC 3 cut(s) 573, 932, 1352
AsuC2I CCSGG 1 cut(s) 505
AsuHPI GGTGA 2 cut(s) 197, 1227
AvaI CYCGRG 1 cut(s) 1787
AvaII GGWCC 3 cut(s) 573, 932, 1352
BanI GGYRCC 1 cut(s) 299
BanII GRGCYC 1 cut(s) 444
BauI CACGAG 1 cut(s) 1890
BbsI GAAGAC 1 cut(s) 962
Bbv12I GWGCWC 2 cut(s) 444, 977
BbvI GCAGC 3 cut(s) 757, 801, 1579
BccI CCATC 5 cut(s) 155, 338, 1067, 1730, 1913
BceAI ACGGC 2 cut(s) 235, 529
BciT130I CCWGG 6 cut(s) 26, 268, 945, 1773, 1999, 2120
BciVI GTATCC 1 cut(s) 648
BclI TGATCA 1 cut(s) 312
BcnI CCSGG 1 cut(s) 505
BcoDI GTCTC 8 cut(s) 246, 1211, 1377, 1935, 2033, 2035, 2112, 2169
BfaI CTAG 4 cut(s) 891, 1716, 1781, 2141
BfmI CTRYAG 3 cut(s) 1213, 1728, 1831
BfuAI ACCTGC 1 cut(s) 1882
BfuI GTATCC 1 cut(s) 648
BisI GCNGC 4 cut(s) 106, 771, 815, 1593
BlsI GCNGC 4 cut(s) 107, 772, 816, 1594
BmcAI AGTACT 1 cut(s) 553
Bme1390I CCNGG 7 cut(s) 26, 268, 505, 945, 1773, 1999, 2120
Bme18I GGWCC 3 cut(s) 573, 932, 1352
BmeRI GACNNNNNGTC 1 cut(s) 1369
BmeT110I CYCGRG 1 cut(s) 1787
BmgT120I GGNCC 3 cut(s) 573, 932, 1352
BmiI GGNNCC 7 cut(s) 30, 265, 301, 502, 510, 574, 1768
BmrFI CCNGG 7 cut(s) 26, 268, 505, 945, 1773, 1999, 2120
BmsI GCATC 6 cut(s) 154, 406, 428, 716, 758, 1279
BoxI GACNNNNGTC 1 cut(s) 603
BpiI GAAGAC 1 cut(s) 962
BplI GAGNNNNNCTC 2 cut(s) 241, 273
BpmI CTGGAG 2 cut(s) 1874, 2019
BpuEI CTTGAG 2 cut(s) 243, 820
BpuMI CCSGG 1 cut(s) 505
Bsa29I ATCGAT 1 cut(s) 658
BsaHI GRCGYC 1 cut(s) 1827
BsaI GGTCTC 3 cut(s) 246, 1211, 2033
BsaJI CCNNGG 3 cut(s) 504, 576, 1771
BsaWI WCCGGW 1 cut(s) 1360
Bsc4I CCNNNNNNNGG 1 cut(s) 2049
Bse1I ACTGG 6 cut(s) 187, 242, 321, 423, 607, 886
Bse3DI GCAATG 3 cut(s) 990, 1317, 2025
BseAI TCCGGA 1 cut(s) 1360
BseBI CCWGG 6 cut(s) 26, 268, 945, 1773, 1999, 2120
BseCI ATCGAT 1 cut(s) 658
BseDI CCNNGG 3 cut(s) 504, 576, 1771
BseGI GGATG 2 cut(s) 419, 1654
BseLI CCNNNNNNNGG 1 cut(s) 2049
BseMI GCAATG 3 cut(s) 990, 1317, 2025
BseMII CTCAG 4 cut(s) 524, 891, 1101, 1440
BseNI ACTGG 6 cut(s) 187, 242, 321, 423, 607, 886
BseXI GCAGC 3 cut(s) 757, 801, 1579
BseYI CCCAGC 1 cut(s) 457
BsgI GTGCAG 1 cut(s) 1578
BshFI GGCC 4 cut(s) 108, 538, 1710, 2053
BshNI GGYRCC 1 cut(s) 299
BshVI ATCGAT 1 cut(s) 658
BsiHKAI GWGCWC 2 cut(s) 444, 977
BsiHKCI CYCGRG 1 cut(s) 1787
BsiSI CCGG 2 cut(s) 504, 1361
BslFI GGGAC 5 cut(s) 410, 440, 1577, 1753, 2181
BslI CCNNNNNNNGG 1 cut(s) 2049
BsmAI GTCTC 8 cut(s) 246, 1211, 1377, 1935, 2033, 2035, 2112, 2169
BsmFI GGGAC 5 cut(s) 410, 440, 1577, 1753, 2181
BsnI GGCC 4 cut(s) 108, 538, 1710, 2053
Bso31I GGTCTC 3 cut(s) 246, 1211, 2033
BsoBI CYCGRG 1 cut(s) 1787
Bsp1286I GDGCHC 2 cut(s) 444, 977
Bsp13I TCCGGA 1 cut(s) 1360
Bsp143I GATC 8 cut(s) 76, 312, 383, 655, 1171, 1638, 1922, 1960
BspACI CCGC 3 cut(s) 105, 113, 705
BspANI GGCC 4 cut(s) 108, 538, 1710, 2053
BspCNI CTCAG 4 cut(s) 525, 890, 1100, 1439
BspDI ATCGAT 1 cut(s) 658
BspEI TCCGGA 1 cut(s) 1360
BspLI GGNNCC 7 cut(s) 30, 265, 301, 502, 510, 574, 1768
BspMAI CTGCAG 1 cut(s) 1732
BspMI ACCTGC 1 cut(s) 1882
BspPI GGATC 6 cut(s) 84, 391, 1166, 1633, 1930, 1968
BspT107I GGYRCC 1 cut(s) 299
BspTNI GGTCTC 3 cut(s) 246, 1211, 2033
BsrDI GCAATG 3 cut(s) 990, 1317, 2025
BsrI ACTGG 6 cut(s) 187, 242, 321, 423, 607, 886
BssECI CCNNGG 3 cut(s) 504, 576, 1771
BssMI GATC 8 cut(s) 76, 312, 383, 655, 1171, 1638, 1922, 1960
BssNI GRCGYC 1 cut(s) 1827
BssSI CACGAG 1 cut(s) 1890
BssT1I CCWWGG 1 cut(s) 576
Bst2BI CACGAG 1 cut(s) 1890
Bst2UI CCWGG 6 cut(s) 26, 268, 945, 1773, 1999, 2120
Bst4CI ACNGT 8 cut(s) 671, 924, 967, 1075, 1214, 1568, 2106, 2174
Bst6I CTCTTC 1 cut(s) 1814
BstACI GRCGYC 1 cut(s) 1827
BstAPI GCANNNNNTGC 1 cut(s) 102
BstC8I GCNNGC 5 cut(s) 39, 747, 819, 1027, 1732
BstDEI CTNAG 9 cut(s) 61, 245, 462, 533, 877, 978, 1087, 1426, 2200
BstF5I GGATG 2 cut(s) 419, 1654
BstHHI GCGC 1 cut(s) 73
BstKTI GATC 8 cut(s) 79, 315, 386, 658, 1174, 1641, 1925, 1963
BstMAI GTCTC 8 cut(s) 246, 1211, 1377, 1935, 2033, 2035, 2112, 2169
BstMBI GATC 8 cut(s) 76, 312, 383, 655, 1171, 1638, 1922, 1960
BstMWI GCNNNNNNNGC 4 cut(s) 47, 93, 102, 1589
BstNI CCWGG 6 cut(s) 26, 268, 945, 1773, 1999, 2120
BstNSI RCATGY 2 cut(s) 853, 2028
BstPAI GACNNNNGTC 1 cut(s) 603
BstSCI CCNGG 7 cut(s) 24, 266, 503, 943, 1771, 1997, 2118
BstSFI CTRYAG 3 cut(s) 1213, 1728, 1831
BstV1I GCAGC 3 cut(s) 757, 801, 1579
BstV2I GAAGAC 1 cut(s) 962
BstX2I RGATCY 2 cut(s) 383, 1171
BstYI RGATCY 2 cut(s) 383, 1171
Bsu15I ATCGAT 1 cut(s) 658
BsuI GTATCC 1 cut(s) 648
BsuRI GGCC 4 cut(s) 108, 538, 1710, 2053
BsuTUI ATCGAT 1 cut(s) 658
BtgZI GCGATG 1 cut(s) 1749
BtsCI GGATG 2 cut(s) 419, 1654
BtsI GCAGTG 2 cut(s) 32, 2093
BtsIMutI CAGTG 4 cut(s) 32, 180, 600, 2093
BveI ACCTGC 1 cut(s) 1882
Cac8I GCNNGC 5 cut(s) 39, 747, 819, 1027, 1732
CaiI CAGNNNCTG 4 cut(s) 273, 752, 1592, 2092
CfoI GCGC 1 cut(s) 73
Cfr13I GGNCC 3 cut(s) 573, 932, 1352
ClaI ATCGAT 1 cut(s) 658
CseI GACGC 1 cut(s) 1598
Csp6I GTAC 5 cut(s) 552, 667, 702, 765, 1847
CviAII CATG 8 cut(s) 68, 653, 850, 910, 1176, 1197, 2025, 2059
CviQI GTAC 5 cut(s) 552, 667, 702, 765, 1847
DdeI CTNAG 9 cut(s) 61, 245, 462, 533, 877, 978, 1087, 1426, 2200
DpnI GATC 8 cut(s) 78, 314, 385, 657, 1173, 1640, 1924, 1962
DpnII GATC 8 cut(s) 76, 312, 383, 655, 1171, 1638, 1922, 1960
DraI TTTAAA 1 cut(s) 1389
DriI GACNNNNNGTC 1 cut(s) 1369
Eam1104I CTCTTC 1 cut(s) 1814
Eam1105I GACNNNNNGTC 1 cut(s) 1369
EarI CTCTTC 1 cut(s) 1814
Ecl136II GAGCTC 1 cut(s) 442
Eco130I CCWWGG 1 cut(s) 576
Eco147I AGGCCT 1 cut(s) 538
Eco24I GRGCYC 1 cut(s) 444
Eco31I GGTCTC 3 cut(s) 246, 1211, 2033
Eco47I GGWCC 3 cut(s) 573, 932, 1352
Eco53kI GAGCTC 1 cut(s) 442
Eco57I CTGAAG 1 cut(s) 2102
Eco88I CYCGRG 1 cut(s) 1787
EcoICRI GAGCTC 1 cut(s) 442
EcoO109I RGGNCCY 1 cut(s) 573
EcoRI GAATTC 3 cut(s) 118, 1082, 2146
EcoRII CCWGG 6 cut(s) 24, 266, 943, 1771, 1997, 2118
EcoT14I CCWWGG 1 cut(s) 576
EcoT22I ATGCAT 2 cut(s) 421, 654
EcoT38I GRGCYC 1 cut(s) 444
ErhI CCWWGG 1 cut(s) 576
FaeI CATG 8 cut(s) 71, 656, 853, 913, 1179, 1200, 2028, 2062
FaqI GGGAC 5 cut(s) 410, 440, 1577, 1753, 2181
FatI CATG 8 cut(s) 67, 652, 849, 909, 1175, 1196, 2024, 2058
FbaI TGATCA 1 cut(s) 312
FblI GTMKAC 2 cut(s) 1570, 1870
Fnu4HI GCNGC 4 cut(s) 106, 771, 815, 1593
FokI GGATG 2 cut(s) 406, 1661
FriOI GRGCYC 1 cut(s) 444
Fsp4HI GCNGC 4 cut(s) 106, 771, 815, 1593
FspBI CTAG 4 cut(s) 891, 1716, 1781, 2141
FspI TGCGCA 1 cut(s) 72
GlaI GCGC 1 cut(s) 72
GluI GCNGC 4 cut(s) 106, 771, 815, 1593
GsaI CCCAGC 1 cut(s) 461
GsuI CTGGAG 2 cut(s) 1874, 2019
HaeIII GGCC 4 cut(s) 108, 538, 1710, 2053
HapII CCGG 2 cut(s) 504, 1361
HgaI GACGC 1 cut(s) 1598
HhaI GCGC 1 cut(s) 73
Hin1I GRCGYC 1 cut(s) 1827
Hin1II CATG 8 cut(s) 71, 656, 853, 913, 1179, 1200, 2028, 2062
Hin6I GCGC 1 cut(s) 71
HinP1I GCGC 1 cut(s) 71
HincII GTYRAC 1 cut(s) 1117
HindII GTYRAC 1 cut(s) 1117
HinfI GANTC 4 cut(s) 660, 1232, 1242, 1741
HpaI GTTAAC 1 cut(s) 1117
HpaII CCGG 2 cut(s) 504, 1361
HphI GGTGA 2 cut(s) 197, 1227
Hpy166II GTNNAC 6 cut(s) 847, 1117, 1466, 1571, 1628, 1871
Hpy188III TCNNGA 8 cut(s) 410, 891, 1063, 1361, 1555, 1716, 2036, 2093
Hpy8I GTNNAC 6 cut(s) 847, 1117, 1466, 1571, 1628, 1871
HpyAV CCTTC 2 cut(s) 181, 1049
HpyCH4III ACNGT 8 cut(s) 671, 924, 967, 1075, 1214, 1568, 2106, 2174
HpyCH4IV ACGT 2 cut(s) 1827, 2194
HpyF10VI GCNNNNNNNGC 4 cut(s) 47, 93, 102, 1589
HpyF3I CTNAG 9 cut(s) 61, 245, 462, 533, 877, 978, 1087, 1426, 2200
HpySE526I ACGT 2 cut(s) 1827, 2194
Hsp92I GRCGYC 1 cut(s) 1827
Hsp92II CATG 8 cut(s) 71, 656, 853, 913, 1179, 1200, 2028, 2062
HspAI GCGC 1 cut(s) 71
Kpn2I TCCGGA 1 cut(s) 1360
Ksp22I TGATCA 1 cut(s) 312
KspAI GTTAAC 1 cut(s) 1117
Kzo9I GATC 8 cut(s) 76, 312, 383, 655, 1171, 1638, 1922, 1960
LmnI GCTCC 6 cut(s) 34, 439, 506, 946, 972, 1022
Lsp1109I GCAGC 3 cut(s) 757, 801, 1579
LweI GCATC 6 cut(s) 154, 406, 428, 716, 758, 1279
MaeI CTAG 4 cut(s) 891, 1716, 1781, 2141
MaeII ACGT 2 cut(s) 1827, 2194
MaeIII GTNAC 3 cut(s) 947, 1750, 1823
MalI GATC 8 cut(s) 78, 314, 385, 657, 1173, 1640, 1924, 1962
MboI GATC 8 cut(s) 76, 312, 383, 655, 1171, 1638, 1922, 1960
MboII GAAGA 8 cut(s) 425, 695, 799, 881, 967, 1168, 1540, 1831
MflI RGATCY 2 cut(s) 383, 1171
MhlI GDGCHC 2 cut(s) 444, 977
MlyI GAGTC 1 cut(s) 1735
MmeI TCCRAC 2 cut(s) 1900, 2053
MnlI CCTC 9 cut(s) 267, 528, 731, 986, 1641, 1721, 1878, 1959, 2209
Mph1103I ATGCAT 2 cut(s) 421, 654
MroI TCCGGA 1 cut(s) 1360
MseI TTAA 9 cut(s) 291, 698, 1053, 1116, 1274, 1346, 1388, 1475, 1970
MslI CAYNNNNRTG 3 cut(s) 483, 1647, 1955
MspI CCGG 2 cut(s) 504, 1361
MspR9I CCNGG 7 cut(s) 26, 268, 505, 945, 1773, 1999, 2120
MvaI CCWGG 6 cut(s) 26, 268, 945, 1773, 1999, 2120
MwoI GCNNNNNNNGC 4 cut(s) 47, 93, 102, 1589
NciI CCSGG 1 cut(s) 505
NdeII GATC 8 cut(s) 76, 312, 383, 655, 1171, 1638, 1922, 1960
NlaIII CATG 8 cut(s) 71, 656, 853, 913, 1179, 1200, 2028, 2062
NlaIV GGNNCC 7 cut(s) 30, 265, 301, 502, 510, 574, 1768
NmeAIII GCCGAG 1 cut(s) 704
NmuCI GTSAC 1 cut(s) 1823
NsbI TGCGCA 1 cut(s) 72
NsiI ATGCAT 2 cut(s) 421, 654
NspI RCATGY 2 cut(s) 853, 2028
OliI CACNNNNGTG 1 cut(s) 1955
PceI AGGCCT 1 cut(s) 538
PfeI GAWTC 3 cut(s) 660, 1232, 1242
PflFI GACNNNGTC 1 cut(s) 401
PkrI GCNGC 4 cut(s) 107, 772, 816, 1594
PleI GAGTC 1 cut(s) 1735
PpsI GAGTC 1 cut(s) 1735
PpuMI RGGWCCY 1 cut(s) 573
PshAI GACNNNNGTC 1 cut(s) 603
PsiI TTATAA 1 cut(s) 825
Psp124BI GAGCTC 1 cut(s) 444
Psp5II RGGWCCY 1 cut(s) 573
Psp6I CCWGG 6 cut(s) 24, 266, 943, 1771, 1997, 2118
PspFI CCCAGC 1 cut(s) 457
PspGI CCWGG 6 cut(s) 24, 266, 943, 1771, 1997, 2118
PspN4I GGNNCC 7 cut(s) 30, 265, 301, 502, 510, 574, 1768
PspPI GGNCC 3 cut(s) 573, 932, 1352
PspPPI RGGWCCY 1 cut(s) 573
PstI CTGCAG 1 cut(s) 1732
PstNI CAGNNNCTG 4 cut(s) 273, 752, 1592, 2092
PsuI RGATCY 2 cut(s) 383, 1171
PsyI GACNNNGTC 1 cut(s) 401
RsaI GTAC 5 cut(s) 553, 668, 703, 766, 1848
RsaNI GTAC 5 cut(s) 552, 667, 702, 765, 1847
RseI CAYNNNNRTG 3 cut(s) 483, 1647, 1955
SacI GAGCTC 1 cut(s) 444
SaqAI TTAA 9 cut(s) 291, 698, 1053, 1116, 1274, 1346, 1388, 1475, 1970
SatI GCNGC 4 cut(s) 106, 771, 815, 1593
Sau3AI GATC 8 cut(s) 76, 312, 383, 655, 1171, 1638, 1922, 1960
Sau96I GGNCC 3 cut(s) 573, 932, 1352
SbfI CCTGCAGG 1 cut(s) 1732
ScaI AGTACT 1 cut(s) 553
SchI GAGTC 1 cut(s) 1735
ScrFI CCNGG 7 cut(s) 26, 268, 505, 945, 1773, 1999, 2120
SdaI CCTGCAGG 1 cut(s) 1732
SduI GDGCHC 2 cut(s) 444, 977
SfaNI GCATC 6 cut(s) 154, 406, 428, 716, 758, 1279
SfcI CTRYAG 3 cut(s) 1213, 1728, 1831
SinI GGWCC 3 cut(s) 573, 932, 1352
SmiI ATTTAAAT 1 cut(s) 1389
SmiMI CAYNNNNRTG 3 cut(s) 483, 1647, 1955
SmlI CTYRAG 2 cut(s) 258, 799
SmoI CTYRAG 2 cut(s) 258, 799
Sse8387I CCTGCAGG 1 cut(s) 1732
SseBI AGGCCT 1 cut(s) 538
SsiI CCGC 3 cut(s) 105, 113, 705
SspI AATATT 2 cut(s) 839, 1980
SspMI CTAG 4 cut(s) 891, 1716, 1781, 2141
SstI GAGCTC 1 cut(s) 444
StuI AGGCCT 1 cut(s) 538
StyD4I CCNGG 7 cut(s) 24, 266, 503, 943, 1771, 1997, 2118
StyI CCWWGG 1 cut(s) 576
SwaI ATTTAAAT 1 cut(s) 1389
TaaI ACNGT 8 cut(s) 671, 924, 967, 1075, 1214, 1568, 2106, 2174
TaiI ACGT 2 cut(s) 1830, 2197
TaqI TCGA 7 cut(s) 150, 645, 658, 710, 1062, 1265, 1883
TatI WGTACW 2 cut(s) 551, 1846
TauI GCSGC 1 cut(s) 108
TfiI GAWTC 3 cut(s) 660, 1232, 1242
Tru1I TTAA 9 cut(s) 291, 698, 1053, 1116, 1274, 1346, 1388, 1475, 1970
Tru9I TTAA 9 cut(s) 291, 698, 1053, 1116, 1274, 1346, 1388, 1475, 1970
TscAI CASTG 4 cut(s) 39, 187, 607, 2093
TseFI GTSAC 1 cut(s) 1823
TseI GCWGC 3 cut(s) 770, 814, 1592
Tsp45I GTSAC 1 cut(s) 1823
TspDTI ATGAA 7 cut(s) 56, 79, 163, 926, 1452, 1926, 2145
TspGWI ACGGA 1 cut(s) 930
TspRI CASTG 4 cut(s) 39, 187, 607, 2093
Tth111I GACNNNGTC 1 cut(s) 401
VpaK11BI GGWCC 3 cut(s) 573, 932, 1352
XapI RAATTY 6 cut(s) 118, 1082, 1384, 1681, 1720, 2146
XbaI TCTAGA 2 cut(s) 890, 1715
XceI RCATGY 2 cut(s) 853, 2028
XmiI GTMKAC 2 cut(s) 1570, 1870
XspI CTAG 4 cut(s) 891, 1716, 1781, 2141
ZraI GACGTC 1 cut(s) 1828
ZrmI AGTACT 1 cut(s) 553
Zsp2I ATGCAT 2 cut(s) 421, 654
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.