Rmu_sc0001554.1_g000008

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001554.1
Physical Location & Seq
Reverse (-)
31890 .. 39626
7737 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001554.1_g000008.1.cds

Sequence Viewer

Length: 795 bp
atgactaacaactttcagaggattcttagcaaaggtggatttggaacggtgtatcacggacacaaagacaacattcaagtagctatcaagatgctttcgccatcatcagttcaagggtttcaacaatttcatgcagaggttgatcttcttattaaagttcataaaaacttgacaaggcttgttggatattgcaatgatgaaaccaacttggggctcgtctacgagttcatggccaatggaaacttacaagaacagctatcagatagcagctcacgtatcttaagctgggaagatagacttaggattgcagtagatgcagcacaaggattggagtacctgcactatggtattaagccaccaataatccatagggatgtgaaatcagcaaacattttgttggatgataattttgaagccaaggtatcagattttggcctatccagaaatttccctgcagatgctgggactcatatatcgacaggtgttgcaggaactaccgggtaccttgatcccgagtattacctatcaaacaggttaaatgagaaaaatgatgtttatagcttcgggattgtgctattggaaattatcacaggtcgacccgcagttttatcgacaacggctgagagaattcacattagccaatgggttggtttcatgcttgtaagaggagacatttctagtcttgtcgatccaaggttggacggggatttcactgtcaactctgtttggaaagctgtagagattgcaatggcatgtgcctctccacatgccattaaaaggccaactatgagttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

264

Amino Acids

29.3

Weight (kDa)

5.97

Isoelectric Point (pI)

36.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 345
Acc65I GGTACC 1 cut(s) 501
AccB1I GGYRCC 1 cut(s) 501
AccI GTMKAC 2 cut(s) 219, 595
AciI CCGC 1 cut(s) 600
AclWI GGATC 2 cut(s) 503, 683
AcoI YGGCCR 1 cut(s) 231
AcsI RAATTY 2 cut(s) 445, 627
AfaI GTAC 2 cut(s) 335, 503
AfiI CCNNNNNNNGG 2 cut(s) 210, 777
AflII CTTAAG 1 cut(s) 280
AgsI TTSAA 4 cut(s) 77, 113, 122, 413
AluBI AGCT 6 cut(s) 83, 256, 270, 285, 561, 734
AluI AGCT 6 cut(s) 83, 256, 270, 285, 561, 734
Alw26I GTCTC 1 cut(s) 663
AlwI GGATC 2 cut(s) 503, 683
AlwNI CAGNNNCTG 1 cut(s) 461
Ama87I CYCGRG 1 cut(s) 512
AoxI GGCC 3 cut(s) 231, 433, 779
ApeKI GCWGC 2 cut(s) 267, 317
ApoI RAATTY 2 cut(s) 445, 627
Asp718I GGTACC 1 cut(s) 501
AsuC2I CCSGG 1 cut(s) 499
AvaI CYCGRG 1 cut(s) 512
BalI TGGCCA 1 cut(s) 233
BanI GGYRCC 1 cut(s) 501
BanII GRGCYC 1 cut(s) 216
BbvI GCAGC 2 cut(s) 279, 329
BccI CCATC 1 cut(s) 109
BceAI ACGGC 1 cut(s) 633
BcgI CGANNNNNNTGC 2 cut(s) 591, 625
BcnI CCSGG 1 cut(s) 499
BcoDI GTCTC 1 cut(s) 663
BfaI CTAG 1 cut(s) 678
BfmI CTRYAG 2 cut(s) 453, 735
BfrI CTTAAG 1 cut(s) 280
BfuAI ACCTGC 1 cut(s) 345
BisI GCNGC 2 cut(s) 268, 318
BlsI GCNGC 2 cut(s) 269, 319
Bme1390I CCNGG 1 cut(s) 499
BmeT110I CYCGRG 1 cut(s) 512
BmiI GGNNCC 1 cut(s) 503
BmrFI CCNGG 1 cut(s) 499
BmsI GCATC 3 cut(s) 81, 304, 448
BpuMI CCSGG 1 cut(s) 499
BsaAI YACGTR 1 cut(s) 275
BsaJI CCNNGG 2 cut(s) 417, 692
Bsc4I CCNNNNNNNGG 2 cut(s) 210, 777
Bse3DI GCAATG 2 cut(s) 199, 753
BseDI CCNNGG 2 cut(s) 417, 692
BseGI GGATG 2 cut(s) 379, 406
BseLI CCNNNNNNNGG 2 cut(s) 210, 777
BseMI GCAATG 2 cut(s) 199, 753
BseMII CTCAG 1 cut(s) 612
BseRI GAGGAG 1 cut(s) 681
BseXI GCAGC 2 cut(s) 279, 329
BseYI CCCAGC 2 cut(s) 285, 461
BsgI GTGCAG 1 cut(s) 323
BshFI GGCC 3 cut(s) 233, 435, 781
BshNI GGYRCC 1 cut(s) 501
BsiHKCI CYCGRG 1 cut(s) 512
BsiSI CCGG 1 cut(s) 498
BslFI GGGAC 1 cut(s) 478
BslI CCNNNNNNNGG 2 cut(s) 210, 777
BsmAI GTCTC 1 cut(s) 663
BsmFI GGGAC 1 cut(s) 478
BsnI GGCC 3 cut(s) 233, 435, 781
BsoBI CYCGRG 1 cut(s) 512
Bsp1286I GDGCHC 1 cut(s) 216
Bsp143I GATC 3 cut(s) 142, 508, 688
BspACI CCGC 1 cut(s) 600
BspANI GGCC 3 cut(s) 233, 435, 781
BspCNI CTCAG 1 cut(s) 613
BspLI GGNNCC 1 cut(s) 503
BspMAI CTGCAG 1 cut(s) 457
BspMI ACCTGC 1 cut(s) 345
BspPI GGATC 2 cut(s) 503, 683
BspT107I GGYRCC 1 cut(s) 501
BspTI CTTAAG 1 cut(s) 280
BsrDI GCAATG 2 cut(s) 199, 753
BssECI CCNNGG 2 cut(s) 417, 692
BssMI GATC 3 cut(s) 142, 508, 688
BssT1I CCWWGG 2 cut(s) 417, 692
Bst4CI ACNGT 2 cut(s) 49, 715
BstAFI CTTAAG 1 cut(s) 280
BstAPI GCANNNNNTGC 1 cut(s) 314
BstBAI YACGTR 1 cut(s) 275
BstDEI CTNAG 3 cut(s) 26, 299, 621
BstF5I GGATG 2 cut(s) 379, 406
BstKTI GATC 3 cut(s) 145, 511, 691
BstMAI GTCTC 1 cut(s) 663
BstMBI GATC 3 cut(s) 142, 508, 688
BstMWI GCNNNNNNNGC 1 cut(s) 314
BstNSI RCATGY 2 cut(s) 756, 770
BstSCI CCNGG 1 cut(s) 497
BstSFI CTRYAG 2 cut(s) 453, 735
BstV1I GCAGC 2 cut(s) 279, 329
BstXI CCANNNNNNTGG 1 cut(s) 647
BsuRI GGCC 3 cut(s) 233, 435, 781
BtsCI GGATG 2 cut(s) 379, 406
BtsIMutI CAGTG 1 cut(s) 711
BveI ACCTGC 1 cut(s) 345
CaiI CAGNNNCTG 1 cut(s) 461
Csp6I GTAC 2 cut(s) 334, 502
CviAII CATG 5 cut(s) 131, 229, 655, 753, 767
CviQI GTAC 2 cut(s) 334, 502
DdeI CTNAG 3 cut(s) 26, 299, 621
DpnI GATC 3 cut(s) 144, 510, 690
DpnII GATC 3 cut(s) 142, 508, 688
EaeI YGGCCR 1 cut(s) 231
Eco130I CCWWGG 2 cut(s) 417, 692
Eco24I GRGCYC 1 cut(s) 216
Eco88I CYCGRG 1 cut(s) 512
EcoRI GAATTC 1 cut(s) 627
EcoT14I CCWWGG 2 cut(s) 417, 692
EcoT38I GRGCYC 1 cut(s) 216
ErhI CCWWGG 2 cut(s) 417, 692
FaeI CATG 5 cut(s) 134, 232, 658, 756, 770
FalI AAGNNNNNCTT 2 cut(s) 282, 314
FaqI GGGAC 1 cut(s) 478
FatI CATG 5 cut(s) 130, 228, 654, 752, 766
FauI CCCGC 1 cut(s) 607
FblI GTMKAC 2 cut(s) 219, 595
Fnu4HI GCNGC 2 cut(s) 268, 318
FokI GGATG 2 cut(s) 386, 413
FriOI GRGCYC 1 cut(s) 216
Fsp4HI GCNGC 2 cut(s) 268, 318
FspBI CTAG 1 cut(s) 678
GluI GCNGC 2 cut(s) 268, 318
GsaI CCCAGC 2 cut(s) 289, 465
HaeIII GGCC 3 cut(s) 233, 435, 781
HapII CCGG 1 cut(s) 498
Hin1II CATG 5 cut(s) 134, 232, 658, 756, 770
HincII GTYRAC 2 cut(s) 596, 718
HindII GTYRAC 2 cut(s) 596, 718
HinfI GANTC 2 cut(s) 22, 466
HpaII CCGG 1 cut(s) 498
Hpy166II GTNNAC 3 cut(s) 220, 596, 718
Hpy188I TCNGA 3 cut(s) 18, 262, 427
Hpy188III TCNNGA 4 cut(s) 88, 441, 512, 565
Hpy8I GTNNAC 3 cut(s) 220, 596, 718
HpyCH4III ACNGT 2 cut(s) 49, 715
HpyCH4IV ACGT 1 cut(s) 274
HpyCH4V TGCA 8 cut(s) 134, 192, 308, 317, 340, 455, 488, 746
HpyF10VI GCNNNNNNNGC 1 cut(s) 314
HpyF3I CTNAG 3 cut(s) 26, 299, 621
HpySE526I ACGT 1 cut(s) 274
Hsp92II CATG 5 cut(s) 134, 232, 658, 756, 770
KpnI GGTACC 1 cut(s) 505
Kzo9I GATC 3 cut(s) 142, 508, 688
Lsp1109I GCAGC 2 cut(s) 279, 329
LweI GCATC 3 cut(s) 81, 304, 448
MaeI CTAG 1 cut(s) 678
MaeII ACGT 1 cut(s) 274
MalI GATC 3 cut(s) 144, 510, 690
MboI GATC 3 cut(s) 142, 508, 688
MboII GAAGA 2 cut(s) 137, 302
MhlI GDGCHC 1 cut(s) 216
MlsI TGGCCA 1 cut(s) 233
MluCI AATT 5 cut(s) 125, 406, 445, 582, 627
MluNI TGGCCA 1 cut(s) 233
MlyI GAGTC 1 cut(s) 460
MmeI TCCRAC 3 cut(s) 163, 378, 678
MnlI CCTC 4 cut(s) 12, 130, 659, 769
Mox20I TGGCCA 1 cut(s) 233
MscI TGGCCA 1 cut(s) 233
MseI TTAA 6 cut(s) 153, 281, 351, 536, 774, 793
MslI CAYNNNNRTG 1 cut(s) 372
Msp20I TGGCCA 1 cut(s) 233
MspCI CTTAAG 1 cut(s) 280
MspI CCGG 1 cut(s) 498
MspR9I CCNGG 1 cut(s) 499
MwoI GCNNNNNNNGC 1 cut(s) 314
NciI CCSGG 1 cut(s) 499
NdeII GATC 3 cut(s) 142, 508, 688
NlaIII CATG 5 cut(s) 134, 232, 658, 756, 770
NlaIV GGNNCC 1 cut(s) 503
NspI RCATGY 2 cut(s) 756, 770
PfeI GAWTC 1 cut(s) 22
PkrI GCNGC 2 cut(s) 269, 319
PleI GAGTC 1 cut(s) 460
PpsI GAGTC 1 cut(s) 460
Ppu21I YACGTR 1 cut(s) 275
PspFI CCCAGC 2 cut(s) 285, 461
PspN4I GGNNCC 1 cut(s) 503
PstI CTGCAG 1 cut(s) 457
PstNI CAGNNNCTG 1 cut(s) 461
RsaI GTAC 2 cut(s) 335, 503
RsaNI GTAC 2 cut(s) 334, 502
RseI CAYNNNNRTG 1 cut(s) 372
SalI GTCGAC 1 cut(s) 594
SaqAI TTAA 6 cut(s) 153, 281, 351, 536, 774, 793
SatI GCNGC 2 cut(s) 268, 318
Sau3AI GATC 3 cut(s) 142, 508, 688
SchI GAGTC 1 cut(s) 460
ScrFI CCNGG 1 cut(s) 499
SduI GDGCHC 1 cut(s) 216
SfaNI GCATC 3 cut(s) 81, 304, 448
SfcI CTRYAG 2 cut(s) 453, 735
SmiMI CAYNNNNRTG 1 cut(s) 372
SmlI CTYRAG 1 cut(s) 280
SmoI CTYRAG 1 cut(s) 280
Sse9I AATT 5 cut(s) 125, 406, 445, 582, 627
SsiI CCGC 1 cut(s) 600
SspMI CTAG 1 cut(s) 678
StyD4I CCNGG 1 cut(s) 497
StyI CCWWGG 2 cut(s) 417, 692
TaaI ACNGT 2 cut(s) 49, 715
TaiI ACGT 1 cut(s) 277
TaqI TCGA 4 cut(s) 476, 595, 611, 687
TasI AATT 5 cut(s) 125, 406, 445, 582, 627
TfiI GAWTC 1 cut(s) 22
Tru1I TTAA 6 cut(s) 153, 281, 351, 536, 774, 793
Tru9I TTAA 6 cut(s) 153, 281, 351, 536, 774, 793
TscAI CASTG 1 cut(s) 718
TseI GCWGC 2 cut(s) 267, 317
TspDTI ATGAA 5 cut(s) 119, 149, 213, 217, 643
TspGWI ACGGA 1 cut(s) 72
TspRI CASTG 1 cut(s) 718
Vha464I CTTAAG 1 cut(s) 280
XapI RAATTY 2 cut(s) 445, 627
XceI RCATGY 2 cut(s) 756, 770
XmiI GTMKAC 2 cut(s) 219, 595
XspI CTAG 1 cut(s) 678
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.