Prupe.3G055900_v2.0.a1

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000083
Physical Location & Seq
Forward (+)
3965324 .. 3969649
4326 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G055900.2

Sequence Viewer

Length: 2685 bp
ATGAAGCCATTCCTCTTTCCTCTGCTTGGTGGCTTTTCTTTTATGCTCCTCCTAGTTCATGCCCAGGATGATCAAACAGGCTTTATTAGCATAGACTGTGGCCTTGCAGAAAATACCAGCTATACAGAAAAGATGACAGGAATTAACTACATTTCAGACGAAACCTTCATAAGCACTGGTGAAAATAACGTCGTATTGCAAGAGTACAGAAATAAGTATCAAGAGCCCTACATGTCTCTTAGGAGTTTCCCTGGAGGGATCAGGAACTGCTACAAAATCAATGTCACAAATGGCACCAAATATTTGATCAGATCAAGTTTCAAATATGGGAACTATGATAGGCAGAATATATTGCCAGAATTCGACTTGCAACTTGGAGCTAATGTTTGGGATTCGGTGAAGTTGGAGGATGCATCAACCATTACAAACAAGGAGCTCATACATGTCCCTCTAAGAGACTATATACATGTTTGTCTAGTGAACACCGGCTTGGGGATTCCATTTATATCGGCACTAGAACTGAGGCCTTTACCTAATACATCTTATCAAACACAAACCGGGTCGTTGGCACTTCAATGGCGGCTTGACACCGGTCACATAGCAGCTAATTTGACAGAATACAGGTATCCAGATGATGTTCATGATCGCTTCTGGTATGGCTACTATGACGACAATTGGAAACGAGTAATTACCTCGTCCACGATTGACTCTGATGTTCACGATAGTTTCCAGCCCCCATCTGTTGTCATGAGCACAGCTGCCACACCAAAGAATGGAACTGATGCCTTGTACATTTCCTGGATGGATTTTGATAACAGTGCAGAATATTTTGTTTACATGCACTTTGCAGAATTTGAAAAGCTCCAACCCAACCAGTCTAGGCAGTTCAACATTACTATGAATGGAGAGTCCCTTCATGAGAAAGTTGTTCCTTATTACTTGTCCTCCTCCACTATTTACAGCACTAGAGCTTTGAGTACTGGAGGACAATATAATCTTTCAATCTTTAAGGCTAAGAACTCTACCCTTCCACCAATCCTTAATGCCATCGAGGTGTACACCGTAAAAGAATTCTTAGAATCAAGAACAAACCAAGCAGATGTTGATGCAATCACTAGCATCAAGTCAACTTACAAAATTGAGAAGAACTGGCAAGGAGATCCATGCTCCCCTCTAGTTAACTCATGGGAAGGTATAGACTGTAGCAATGAGCACAGTAGAATAGTATCCTTGAACTTGTCCTCCAGCGGATTAACAGGGGAGATAGCTCCTTATATATCCAATCTCACCATGATACACATTTTAGATTTATCAAACAACAATTTAACTGGATCAATCCCAGACTTTTTGTCTCGACTGCGAAAGTTAACAGTCCTCAACTTGGCGAAAAACAAACTCACAGGTTTAGTTCCCGTAGGACTCATTCAGAAGAGGAAGGATGGTTTGCTATCCCTACGTTTGTGTGAAAATCCAAACCTATCTGGACAAGTTTCGTGCAAAAAGAAGAAGCAGAGTATCACTATTGTCTTGGCAGTGTCAATCCCTGGAATTTTCATCCTCTTATCAACTGTATCAGCTGTTTTATGGGTGGGCTTTAAAAGGAAAAAACAACATGCCCATTGTGATGATCCTTTTGGTGTAGAGGTGATGCAGAATTCCAACCAAAACAGTTTATTGGAGTCAGAGGGCCAACGCTTTACATACCCAGAGATTGTGGAGATTACCAGTAATTTTGCATCAATAATTGGAAGAGGCGGATTTGGAGAAGTCTACTTTGGCACTCTGCAAAATCAGACTCAAGTTGCTGTCAAGTTACTGATTTCATCGTCAACACAAGGCTCAAAAGAATTTGAAAATGAGGTTAAACTGTTGATGAGAGCTCATCATAGAAACTTGGTTTCTCTGGTTGGGTGCTGTGATGAAGGGGAGACTATGGCACTTGTTTATAATTTCGTTGCTAATGGAAATTTGCAACAGCGTTTATCAGCTGATTTAACTTTACACGTTTTGACTTGGAAGGAGAGACTTCAAATTGCAGTTGATGCAGCACGAGGACTGGATTATCTACACAATGGCTGCAAGCCATCAATAGTACATAGAGATCTAAAGACTTCAAATATCTTGCTAAATGAAAATCTTCACGCCATGATAGCCGATTTTGGTCTTTCTAAAGTTCTTGCAACTGAAAGTGCCACTCATGTATCAACTGACCCTAAAGGAACATTTGGGTACCTTGATCCTCAATATTACAACACAGGAAAGCTGAACAAAAAGAGTGATATATACAGCTTTGGGATTGTGTTGCTAGAGCTAATAACTGGTAGAGCAGCAATAATAAGAGATGTAGAAACTGAACCTATTCACATATGTCGATGGGTGAGTCCAAATTTTGAGACTATGGAAATTGAAAGTATCGTGGATTCAAGAATACAAGGGACCTACAACACCTCTTCTGCTTGGAAAGCTCTACAAATTGCCATGGCATGTGTGTCTTTAAAAGCAATCCGAAGGCCTGATATAATTTTTATTTATAAGGACTTGATGGAATGTTTGGAAATTGAGATGTCCTCTGGAAGAACACAAATTGTAGGGAACGATGATACAAGTTCAAGCAGCTCAATTAGAATGGCCTCCCAAATTGAGTCAGAAACGAGTTCAAGCAGCCCAGTTATCATCTCTATATAG

Protein Analysis

895

Amino Acids

100.06

Weight (kDa)

5.85

Isoelectric Point (pI)

40.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000083)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07560 AT1G51790 AT1G51790 AT1G51790 AT1G51800 AT1G51805 AT1G51805 AT1G51810 AT1G51820 AT1G51820 AT1G51830 AT1G51830 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51840 AT1G51850 AT1G51850 AT1G51860 AT1G51860 AT1G51870 AT1G51870 AT1G51880 AT1G51880 AT1G51880 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51890 AT1G51910 AT2G04300 AT2G04300 AT2G28960 AT2G28960 AT2G28970 AT2G28970 AT2G28990 AT2G28990 AT2G29000 AT3G21340 AT3G46350 AT5G59616 AT5G59650 AT5G59650 AT5G59660 AT5G59660 AT5G59660 AT5G59670 AT5G59670 AT5G59680
fragaria_vesca FvH4_2g03270 FvH4_3g21300 FvH4_6g32660 FvH4_6g32660 FvH4_6g32670 FvH4_6g32670 FvH4_6g32690 FvH4_6g32690 FvH4_6g32691 FvH4_6g32700 FvH4_6g32740 FvH4_6g32750 FvH4_6g33210 FvH4_6g33210 FvH4_7g24270 FvH4_7g24280 FvH4_7g24291 FvH4_7g24300
malus_domestica MD09G1198400.v1.1 MD09G1198600.v1.1 MD09G1199100.v1.1 MD09G1199200.v1.1 MD09G1199300.v1.1 MD09G1199500.v1.1 MD09G1199600.v1.1 MD17G1179300.v1.1 MD17G1180200.v1.1 MD17G1266000.v1.1
prunus_persica Prupe.1G438900_v2.0.a1 Prupe.1G439000_v2.0.a1 Prupe.1G439100_v2.0.a1 Prupe.3G019400_v2.0.a1 Prupe.3G021900_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G054500_v2.0.a1 Prupe.3G055100_v2.0.a1 Prupe.3G055400_v2.0.a1 Prupe.3G055500_v2.0.a1 Prupe.3G055600_v2.0.a1 Prupe.3G055700_v2.0.a1 Prupe.3G055800_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G055900_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056000_v2.0.a1 Prupe.3G056100_v2.0.a1 Prupe.3G209600_v2.0.a1 Prupe.3G209700_v2.0.a1 Prupe.6G291100_v2.0.a1 Prupe.7G208900_v2.0.a1 Prupe.8G038300_v2.0.a1
pyrus_communis pycom09g11570 pycom09g11580 pycom09g11610 pycom09g11630 pycom09g11640 pycom17g18840 pycom17g18910 pycom17g18930 pycom17g18940
rosa_chinensis RchiOBHm_Chr1g0317521 RchiOBHm_Chr1g0317541 RchiOBHm_Chr2g0123351 RchiOBHm_Chr2g0141181 RchiOBHm_Chr2g0141191 RchiOBHm_Chr2g0141211 RchiOBHm_Chr2g0141221 RchiOBHm_Chr2g0141261 RchiOBHm_Chr2g0141271 RchiOBHm_Chr2g0141311 RchiOBHm_Chr2g0141331 RchiOBHm_Chr2g0141371 RchiOBHm_Chr2g0141391 RchiOBHm_Chr2g0141401 RchiOBHm_Chr2g0141431 RchiOBHm_Chr2g0141481 RchiOBHm_Chr2g0141491 RchiOBHm_Chr2g0141591 RchiOBHm_Chr2g0141601 RchiOBHm_Chr2g0141611 RchiOBHm_Chr2g0141631 RchiOBHm_Chr2g0141641 RchiOBHm_Chr2g0141661 RchiOBHm_Chr2g0141681 RchiOBHm_Chr2g0141701 RchiOBHm_Chr2g0141781 RchiOBHm_Chr2g0141811 RchiOBHm_Chr2g0141821 RchiOBHm_Chr3g0479311 RchiOBHm_Chr3g0495751 RchiOBHm_Chr4g0404741 RchiOBHm_Chr4g0410341 RchiOBHm_Chr4g0418371 RchiOBHm_Chr4g0438651 RchiOBHm_Chr5g0036411 RchiOBHm_Chr5g0036491 RchiOBHm_Chr5g0042391 RchiOBHm_Chr6g0279871 RchiOBHm_Chr7g0192921 RchiOBHm_Chr7g0214901 RchiOBHm_Chr7g0234931
rosa_laevigata RLG00000003432 RLG00000008806 RLG00000013062 RLG00000019514 RLG00000019923 RLG00000019924 RLG00000019925 RLG00000019930 RLG00000019931 RLG00000019934 RLG00000019937 RLG00000019938 RLG00000033697
rosa_multiflora Rmu_co8002302.1_g000001 Rmu_sc0000147.1_g000031 Rmu_sc0000463.1_g000005 Rmu_sc0000712.1_g000003 Rmu_sc0001483.1_g000017 Rmu_sc0001554.1_g000002 Rmu_sc0001554.1_g000005 Rmu_sc0001554.1_g000008 Rmu_sc0001981.1_g000017 Rmu_sc0002040.1_g000056 Rmu_sc0002755.1_g000018 Rmu_sc0002804.1_g000016 Rmu_sc0002928.1_g000015 Rmu_sc0003040.1_g000008 Rmu_sc0003040.1_g000018 Rmu_sc0004512.1_g000001 Rmu_sc0004512.1_g000004 Rmu_sc0005507.1_g000001 Rmu_sc0005507.1_g000009 Rmu_sc0005507.1_g000033 Rmu_sc0005507.1_g000037 Rmu_sc0005507.1_g000043 Rmu_sc0005507.1_g000047 Rmu_sc0006318.1_g000004 Rmu_sc0006318.1_g000014 Rmu_sc0006318.1_g000021 Rmu_sc0006556.1_g000001 Rmu_sc0007208.1_g000002 Rmu_sc0007208.1_g000003 Rmu_sc0007208.1_g000006 Rmu_sc0007208.1_g000008
rosa_roxburghii Rroxscaffold_1G00044430 Rroxscaffold_2G00103420 Rroxscaffold_2G00103470 Rroxscaffold_2G00103490 Rroxscaffold_2G00103500 Rroxscaffold_2G00103520 Rroxscaffold_2G00103530 Rroxscaffold_2G00103540 Rroxscaffold_2G00103550 Rroxscaffold_2G00103570 Rroxscaffold_2G00103770 Rroxscaffold_2G00103780 Rroxscaffold_2G00103800 Rroxscaffold_2G00103820 Rroxscaffold_2G00103860 Rroxscaffold_2G00103890 Rroxscaffold_2G00103930 Rroxscaffold_2G00103940 Rroxscaffold_2G00104010 Rroxscaffold_2G00104030 Rroxscaffold_2G00104050 Rroxscaffold_2G00104060 Rroxscaffold_2G00104070 Rroxscaffold_2G00104090 Rroxscaffold_2G00104100 Rroxscaffold_2G00104120 Rroxscaffold_2G00104130 Rroxscaffold_4G00331710
rosa_rugosa Rorug02G0367500 Rorug02G0367500 Rorug02G0367600 Rorug02G0367800 Rorug02G0367800 Rorug02G0367900 Rorug02G0368100 Rorug02G0368100 Rorug02G0368100 Rorug02G0368200 Rorug02G0368700 Rorug02G0368900 Rorug05G0155600 Rorug05G0155700 Rorug05G0155800 Rorug05G0156700 Rorug05G0157300
rosa_samantha Rh1AG028000 Rh2AG418700 Rh2AG418900 Rh2AG419000 Rh2AG419100 Rh2AG419400 Rh2AG419600 Rh2AG419800 Rh2AG420400 Rh2AG421000 Rh2BG428500 Rh2BG428600 Rh2BG428800 Rh2BG428900 Rh2BG429300 Rh2BG429400 Rh2BG429700 Rh2BG429900 Rh2BG430000 Rh2BG430700 Rh2CG405100 Rh2CG405200 Rh2CG405300 Rh2CG405500 Rh2CG405600 Rh2CG405700 Rh2CG406000 Rh2CG406100 Rh2CG406300 Rh2CG406600 Rh2CG406700 Rh2CG407500 Rh2CG408100 Rh2DG438500 Rh3DG123900 Rh3DG124000 Rh5BG249700 Rh5BG482500 Rh5CG281500 Rh5CG507300 Rh7DG133300
rosa_wichuraiana Rw0G019720 Rw0G019730 Rw0G019750 Rw0G023010 Rw2G034340 Rw2G034350 Rw2G034370 Rw2G034380 Rw2G034400 Rw2G034430 Rw2G034470 Rw2G034480 Rw2G034510 Rw5G022890 Rw5G026410 Rw5G032710 Rw5G042850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1947, 2532
Acc65I GGTACC 1 cut(s) 2229
AccB1I GGYRCC 2 cut(s) 293, 2229
AccB7I CCANNNNNTGG 1 cut(s) 773
AccI GTMKAC 1 cut(s) 1770
AciI CCGC 3 cut(s) 580, 1248, 1755
AclWI GGATC 5 cut(s) 266, 1154, 1339, 1622, 2231
AcsI RAATTY 8 cut(s) 359, 851, 1070, 1548, 1654, 1847, 1966, 2386
AfaI GTAC 6 cut(s) 206, 791, 979, 1058, 2094, 2231
AfiI CCNNNNNNNGG 4 cut(s) 26, 492, 773, 1381
AflIII ACRYGT 4 cut(s) 231, 442, 466, 2002
AgeI ACCGGT 1 cut(s) 590
AhdI GACNNNNNGTC 1 cut(s) 1348
AjnI CCWGG 4 cut(s) 63, 250, 797, 1543
AjuI GAANNNNNNNTTGG 4 cut(s) 473, 505, 1758, 1790
AloI GAACNNNNNNTCC 2 cut(s) 1226, 1258
Alw21I GWGCWC 4 cut(s) 438, 755, 1215, 1882
Alw26I GTCTC 6 cut(s) 240, 450, 1356, 1922, 2017, 2387
AlwI GGATC 5 cut(s) 266, 1154, 1339, 1622, 2231
AlwNI CAGNNNCTG 1 cut(s) 267
AoxI GGCC 5 cut(s) 100, 524, 1687, 2510, 2628
ApeKI GCWGC 7 cut(s) 602, 758, 2045, 2076, 2327, 2613, 2661
ApoI RAATTY 8 cut(s) 359, 851, 1070, 1548, 1654, 1847, 1966, 2386
ArsI GACNNNNNNTTYG 2 cut(s) 267, 299
AsiGI ACCGGT 1 cut(s) 590
Asp700I GAANNNNTTC 3 cut(s) 8, 2136, 2358
Asp718I GGTACC 1 cut(s) 2229
AspS9I GGNCC 2 cut(s) 1687, 2436
AsuC2I CCSGG 1 cut(s) 559
AsuHPI GGTGA 5 cut(s) 191, 409, 1279, 1657, 2389
AvaII GGWCC 1 cut(s) 2436
BaeI ACNNNNGTAYC 2 cut(s) 2184, 2217
BanI GGYRCC 2 cut(s) 293, 2229
BanII GRGCYC 3 cut(s) 228, 438, 1882
BauI CACGAG 1 cut(s) 2049
Bbv12I GWGCWC 4 cut(s) 438, 755, 1215, 1882
BbvI GCAGC 7 cut(s) 614, 745, 2057, 2063, 2339, 2625, 2673
BccI CCATC 7 cut(s) 745, 796, 1055, 1433, 2092, 2367, 2536
BciT130I CCWGG 4 cut(s) 65, 252, 799, 1545
BciVI GTATCC 2 cut(s) 636, 1237
BclI TGATCA 2 cut(s) 70, 306
BcnI CCSGG 1 cut(s) 559
BcoDI GTCTC 6 cut(s) 240, 450, 1356, 1922, 2017, 2387
BfaI CTAG 8 cut(s) 53, 476, 515, 879, 966, 1116, 1175, 2306
BfmI CTRYAG 1 cut(s) 1201
BfuI GTATCC 2 cut(s) 636, 1237
BglII AGATCT 1 cut(s) 2101
BisI GCNGC 8 cut(s) 581, 603, 759, 2046, 2077, 2328, 2614, 2662
BlsI GCNGC 8 cut(s) 582, 604, 760, 2047, 2078, 2329, 2615, 2663
BmcAI AGTACT 1 cut(s) 979
Bme1390I CCNGG 5 cut(s) 65, 252, 559, 799, 1545
Bme18I GGWCC 1 cut(s) 2436
BmeRI GACNNNNNGTC 1 cut(s) 1348
BmgT120I GGNCC 2 cut(s) 1687, 2436
BmiI GGNNCC 3 cut(s) 295, 2231, 2437
BmrFI CCNGG 5 cut(s) 65, 252, 559, 799, 1545
BmrI ACTGGG 1 cut(s) 2660
BmsI GCATC 8 cut(s) 400, 422, 772, 1096, 1128, 1638, 1745, 2032
BmuI ACTGGG 1 cut(s) 2660
BoxI GACNNNNGTC 1 cut(s) 591
BplI GAGNNNNNCTC 2 cut(s) 2552, 2584
BpmI CTGGAG 3 cut(s) 273, 1002, 1228
BpuEI CTTGAG 1 cut(s) 1782
BpuMI CCSGG 1 cut(s) 559
BsaJI CCNNGG 4 cut(s) 63, 250, 1543, 2478
BsaWI WCCGGW 1 cut(s) 590
BsaXI ACNNNNNCTCC 6 cut(s) 369, 399, 929, 959, 1226, 1256
Bsc4I CCNNNNNNNGG 4 cut(s) 26, 492, 773, 1381
Bse118I RCCGGY 2 cut(s) 485, 590
Bse1I ACTGG 9 cut(s) 181, 874, 985, 1154, 1333, 1725, 2061, 2323, 2666
Bse3DI GCAATG 1 cut(s) 1213
BseBI CCWGG 4 cut(s) 65, 252, 799, 1545
BseDI CCNNGG 4 cut(s) 63, 250, 1543, 2478
BseGI GGATG 5 cut(s) 73, 415, 807, 1444, 1554
BseLI CCNNNNNNNGG 4 cut(s) 26, 492, 773, 1381
BseMI GCAATG 1 cut(s) 1213
BseMII CTCAG 1 cut(s) 512
BseNI ACTGG 9 cut(s) 181, 874, 985, 1154, 1333, 1725, 2061, 2323, 2666
BseRI GAGGAG 2 cut(s) 38, 937
BseXI GCAGC 7 cut(s) 614, 745, 2057, 2063, 2339, 2625, 2673
BsgI GTGCAG 1 cut(s) 840
BshFI GGCC 5 cut(s) 102, 526, 1689, 2512, 2630
BshNI GGYRCC 2 cut(s) 293, 2229
BshTI ACCGGT 1 cut(s) 590
BsiHKAI GWGCWC 4 cut(s) 438, 755, 1215, 1882
BsiSI CCGG 3 cut(s) 486, 558, 591
BslFI GGGAC 3 cut(s) 431, 895, 2449
BslI CCNNNNNNNGG 4 cut(s) 26, 492, 773, 1381
BsmAI GTCTC 6 cut(s) 240, 450, 1356, 1922, 2017, 2387
BsmFI GGGAC 3 cut(s) 431, 895, 2449
BsnI GGCC 5 cut(s) 102, 526, 1689, 2512, 2630
Bsp1286I GDGCHC 5 cut(s) 228, 438, 755, 1215, 1882
Bsp1407I TGTACA 2 cut(s) 789, 1056
Bsp19I CCATGG 1 cut(s) 2478
BspACI CCGC 3 cut(s) 580, 1248, 1755
BspANI GGCC 5 cut(s) 102, 526, 1689, 2512, 2630
BspCNI CTCAG 1 cut(s) 513
BspHI TCATGA 3 cut(s) 640, 747, 916
BspLI GGNNCC 3 cut(s) 295, 2231, 2437
BspPI GGATC 5 cut(s) 266, 1154, 1339, 1622, 2231
BspT107I GGYRCC 2 cut(s) 293, 2229
BsrDI GCAATG 1 cut(s) 1213
BsrFI RCCGGY 2 cut(s) 485, 590
BsrGI TGTACA 2 cut(s) 789, 1056
BsrI ACTGG 9 cut(s) 181, 874, 985, 1154, 1333, 1725, 2061, 2323, 2666
BssAI RCCGGY 2 cut(s) 485, 590
BssECI CCNNGG 4 cut(s) 63, 250, 1543, 2478
BssSI CACGAG 1 cut(s) 2049
BssT1I CCWWGG 1 cut(s) 2478
Bst2BI CACGAG 1 cut(s) 2049
Bst2UI CCWGG 4 cut(s) 65, 252, 799, 1545
Bst4CI ACNGT 9 cut(s) 98, 818, 1063, 1202, 1217, 1372, 1570, 1670, 1869
Bst6I CTCTTC 3 cut(s) 1424, 1744, 2455
BstAPI GCANNNNNTGC 1 cut(s) 2042
BstAUI TGTACA 2 cut(s) 789, 1056
BstC8I GCNNGC 1 cut(s) 2081
BstDEI CTNAG 5 cut(s) 239, 452, 521, 1014, 1075
BstDSI CCRYGG 1 cut(s) 2478
BstF5I GGATG 5 cut(s) 73, 415, 807, 1444, 1554
BstMAI GTCTC 6 cut(s) 240, 450, 1356, 1922, 2017, 2387
BstMWI GCNNNNNNNGC 4 cut(s) 87, 2042, 2150, 2462
BstNI CCWGG 4 cut(s) 65, 252, 799, 1545
BstNSI RCATGY 6 cut(s) 235, 446, 470, 841, 1616, 2487
BstPAI GACNNNNGTC 1 cut(s) 591
BstSCI CCNGG 5 cut(s) 63, 250, 557, 797, 1543
BstSFI CTRYAG 1 cut(s) 1201
BstV1I GCAGC 7 cut(s) 614, 745, 2057, 2063, 2339, 2625, 2673
BstX2I RGATCY 2 cut(s) 1159, 2101
BstYI RGATCY 2 cut(s) 1159, 2101
BsuI GTATCC 2 cut(s) 636, 1237
BsuRI GGCC 5 cut(s) 102, 526, 1689, 2512, 2630
BtgI CCRYGG 1 cut(s) 2478
BtsCI GGATG 5 cut(s) 73, 415, 807, 1444, 1554
BtsI GCAGTG 1 cut(s) 1539
BtsIMutI CAGTG 3 cut(s) 174, 823, 1539
Cac8I GCNNGC 1 cut(s) 2081
CaiI CAGNNNCTG 1 cut(s) 267
CciI TCATGA 3 cut(s) 640, 747, 916
Cfr10I RCCGGY 2 cut(s) 485, 590
Cfr13I GGNCC 2 cut(s) 1687, 2436
Csp6I GTAC 6 cut(s) 205, 790, 978, 1057, 2093, 2230
CspAI ACCGGT 1 cut(s) 590
CviQI GTAC 6 cut(s) 205, 790, 978, 1057, 2093, 2230
DdeI CTNAG 5 cut(s) 239, 452, 521, 1014, 1075
DraI TTTAAA 2 cut(s) 1597, 2496
DriI GACNNNNNGTC 1 cut(s) 1348
Eam1104I CTCTTC 3 cut(s) 1424, 1744, 2455
Eam1105I GACNNNNNGTC 1 cut(s) 1348
EarI CTCTTC 3 cut(s) 1424, 1744, 2455
EciI GGCGGA 1 cut(s) 1770
Ecl136II GAGCTC 2 cut(s) 436, 1880
Eco130I CCWWGG 1 cut(s) 2478
Eco147I AGGCCT 2 cut(s) 526, 2512
Eco24I GRGCYC 3 cut(s) 228, 438, 1882
Eco47I GGWCC 1 cut(s) 2436
Eco53kI GAGCTC 2 cut(s) 436, 1880
EcoICRI GAGCTC 2 cut(s) 436, 1880
EcoO109I RGGNCCY 1 cut(s) 2436
EcoRI GAATTC 3 cut(s) 359, 1070, 1654
EcoRII CCWGG 4 cut(s) 63, 250, 797, 1543
EcoT14I CCWWGG 1 cut(s) 2478
EcoT22I ATGCAT 1 cut(s) 415
EcoT38I GRGCYC 3 cut(s) 228, 438, 1882
ErhI CCWWGG 1 cut(s) 2478
FaqI GGGAC 3 cut(s) 431, 895, 2449
FauNDI CATATG 1 cut(s) 2366
FbaI TGATCA 2 cut(s) 70, 306
FblI GTMKAC 1 cut(s) 1770
Fnu4HI GCNGC 8 cut(s) 581, 603, 759, 2046, 2077, 2328, 2614, 2662
FokI GGATG 5 cut(s) 80, 422, 814, 1451, 1541
FriOI GRGCYC 3 cut(s) 228, 438, 1882
Fsp4HI GCNGC 8 cut(s) 581, 603, 759, 2046, 2077, 2328, 2614, 2662
FspBI CTAG 8 cut(s) 53, 476, 515, 879, 966, 1116, 1175, 2306
GluI GCNGC 8 cut(s) 581, 603, 759, 2046, 2077, 2328, 2614, 2662
GsuI CTGGAG 3 cut(s) 273, 1002, 1228
HaeIII GGCC 5 cut(s) 102, 526, 1689, 2512, 2630
HapII CCGG 3 cut(s) 486, 558, 591
HincII GTYRAC 4 cut(s) 1128, 1180, 1368, 1830
HindII GTYRAC 4 cut(s) 1128, 1180, 1368, 1830
HpaI GTTAAC 2 cut(s) 1180, 1368
HpaII CCGG 3 cut(s) 486, 558, 591
HphI GGTGA 5 cut(s) 191, 409, 1279, 1657, 2389
Hpy188I TCNGA 8 cut(s) 157, 311, 712, 1428, 1684, 1794, 2507, 2647
Hpy99I CGWCG 1 cut(s) 194
HpyAV CCTTC 8 cut(s) 175, 923, 1037, 1184, 1429, 1916, 2011, 2502
HpyCH4III ACNGT 9 cut(s) 98, 818, 1063, 1202, 1217, 1372, 1570, 1670, 1869
HpyCH4IV ACGT 3 cut(s) 189, 1456, 2004
HpyF10VI GCNNNNNNNGC 4 cut(s) 87, 2042, 2150, 2462
HpyF3I CTNAG 5 cut(s) 239, 452, 521, 1014, 1075
HpySE526I ACGT 3 cut(s) 189, 1456, 2004
KpnI GGTACC 1 cut(s) 2233
Ksp22I TGATCA 2 cut(s) 70, 306
KspAI GTTAAC 2 cut(s) 1180, 1368
LmnI GCTCC 6 cut(s) 51, 377, 433, 867, 1172, 1273
Lsp1109I GCAGC 7 cut(s) 614, 745, 2057, 2063, 2339, 2625, 2673
LweI GCATC 8 cut(s) 400, 422, 772, 1096, 1128, 1638, 1745, 2032
MaeI CTAG 8 cut(s) 53, 476, 515, 879, 966, 1116, 1175, 2306
MaeII ACGT 3 cut(s) 189, 1456, 2004
MaeIII GTNAC 3 cut(s) 283, 593, 1812
MboII GAAGA 7 cut(s) 1156, 1441, 1516, 1761, 2129, 2442, 2586
MfeI CAATTG 1 cut(s) 673
MflI RGATCY 2 cut(s) 1159, 2101
MhlI GDGCHC 5 cut(s) 228, 438, 755, 1215, 1882
MlyI GAGTC 7 cut(s) 701, 917, 1413, 1688, 1789, 2389, 2651
MmeI TCCRAC 3 cut(s) 384, 889, 1683
Mph1103I ATGCAT 1 cut(s) 415
MroXI GAANNNNTTC 3 cut(s) 8, 2136, 2358
MslI CAYNNNNRTG 4 cut(s) 574, 896, 1052, 1623
MspA1I CMGCKG 4 cut(s) 758, 1248, 1577, 1988
MspI CCGG 3 cut(s) 486, 558, 591
MspR9I CCNGG 5 cut(s) 65, 252, 559, 799, 1545
MunI CAATTG 1 cut(s) 673
MvaI CCWGG 4 cut(s) 65, 252, 799, 1545
MwoI GCNNNNNNNGC 4 cut(s) 87, 2042, 2150, 2462
NciI CCSGG 1 cut(s) 559
NcoI CCATGG 1 cut(s) 2478
NdeI CATATG 1 cut(s) 2366
NlaIV GGNNCC 3 cut(s) 295, 2231, 2437
NmuCI GTSAC 2 cut(s) 283, 593
NsiI ATGCAT 1 cut(s) 415
NspI RCATGY 6 cut(s) 235, 446, 470, 841, 1616, 2487
PagI TCATGA 3 cut(s) 640, 747, 916
PceI AGGCCT 2 cut(s) 526, 2512
PciI ACATGT 3 cut(s) 231, 442, 466
PdmI GAANNNNTTC 3 cut(s) 8, 2136, 2358
PfeI GAWTC 4 cut(s) 392, 496, 1079, 2420
PflMI CCANNNNNTGG 1 cut(s) 773
PfoI TCCNGGA 1 cut(s) 797
PinAI ACCGGT 1 cut(s) 590
PkrI GCNGC 8 cut(s) 582, 604, 760, 2047, 2078, 2329, 2615, 2663
PleI GAGTC 7 cut(s) 701, 916, 1413, 1687, 1789, 2388, 2650
PpsI GAGTC 7 cut(s) 701, 916, 1413, 1687, 1789, 2388, 2650
PpuMI RGGWCCY 1 cut(s) 2436
PscI ACATGT 3 cut(s) 231, 442, 466
PshAI GACNNNNGTC 1 cut(s) 591
PsiI TTATAA 2 cut(s) 1947, 2532
Psp124BI GAGCTC 2 cut(s) 438, 1882
Psp5II RGGWCCY 1 cut(s) 2436
Psp6I CCWGG 4 cut(s) 63, 250, 797, 1543
PspGI CCWGG 4 cut(s) 63, 250, 797, 1543
PspN4I GGNNCC 3 cut(s) 295, 2231, 2437
PspPI GGNCC 2 cut(s) 1687, 2436
PspPPI RGGWCCY 1 cut(s) 2436
PstNI CAGNNNCTG 1 cut(s) 267
PsuI RGATCY 2 cut(s) 1159, 2101
PvuII CAGCTG 3 cut(s) 758, 1577, 1988
RsaI GTAC 6 cut(s) 206, 791, 979, 1058, 2094, 2231
RsaNI GTAC 6 cut(s) 205, 790, 978, 1057, 2093, 2230
RseI CAYNNNNRTG 4 cut(s) 574, 896, 1052, 1623
SacI GAGCTC 2 cut(s) 438, 1882
SatI GCNGC 8 cut(s) 581, 603, 759, 2046, 2077, 2328, 2614, 2662
Sau96I GGNCC 2 cut(s) 1687, 2436
ScaI AGTACT 1 cut(s) 979
SchI GAGTC 7 cut(s) 701, 917, 1413, 1688, 1789, 2389, 2651
ScrFI CCNGG 5 cut(s) 65, 252, 559, 799, 1545
SduI GDGCHC 5 cut(s) 228, 438, 755, 1215, 1882
SfaNI GCATC 8 cut(s) 400, 422, 772, 1096, 1128, 1638, 1745, 2032
SfcI CTRYAG 1 cut(s) 1201
SinI GGWCC 1 cut(s) 2436
SmiMI CAYNNNNRTG 4 cut(s) 574, 896, 1052, 1623
SmlI CTYRAG 1 cut(s) 1797
SmoI CTYRAG 1 cut(s) 1797
SseBI AGGCCT 2 cut(s) 526, 2512
SsiI CCGC 3 cut(s) 580, 1248, 1755
SspI AATATT 3 cut(s) 302, 827, 2246
SspMI CTAG 8 cut(s) 53, 476, 515, 879, 966, 1116, 1175, 2306
SstI GAGCTC 2 cut(s) 438, 1882
StuI AGGCCT 2 cut(s) 526, 2512
StyD4I CCNGG 5 cut(s) 63, 250, 557, 797, 1543
StyI CCWWGG 1 cut(s) 2478
TaaI ACNGT 9 cut(s) 98, 818, 1063, 1202, 1217, 1372, 1570, 1670, 1869
TaiI ACGT 3 cut(s) 192, 1459, 2007
TaqI TCGA 4 cut(s) 363, 1050, 1354, 2371
TatI WGTACW 5 cut(s) 204, 789, 977, 1056, 2092
TauI GCSGC 1 cut(s) 583
TfiI GAWTC 4 cut(s) 392, 496, 1079, 2420
TscAI CASTG 3 cut(s) 181, 823, 1539
TseFI GTSAC 2 cut(s) 283, 593
TseI GCWGC 7 cut(s) 602, 758, 2045, 2076, 2327, 2613, 2661
Tsp45I GTSAC 2 cut(s) 283, 593
TspRI CASTG 3 cut(s) 181, 823, 1539
Van91I CCANNNNNTGG 1 cut(s) 773
VpaK11BI GGWCC 1 cut(s) 2436
XapI RAATTY 8 cut(s) 359, 851, 1070, 1548, 1654, 1847, 1966, 2386
XceI RCATGY 6 cut(s) 235, 446, 470, 841, 1616, 2487
XmiI GTMKAC 1 cut(s) 1770
XmnI GAANNNNTTC 3 cut(s) 8, 2136, 2358
XspI CTAG 8 cut(s) 53, 476, 515, 879, 966, 1116, 1175, 2306
ZrmI AGTACT 1 cut(s) 979
Zsp2I ATGCAT 1 cut(s) 415
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.