FvH4_4g13590

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000047
Physical Location & Seq
Reverse (-)
17157419 .. 17164041
6623 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g13590.t1

Sequence Viewer

Length: 3060 bp
ATGAAAATCATGCTCGACTTTCTCCTATTGCTATTTGCCATCTCCGTTACTTGCTCCTATGCAATTGGCAGCAAATGTATCGGAGACCAGCAGCTGGTTTCTTTGCTCAATATGAAGAAAAGTCTTGTGTTCAATGCTTCAAGTTCGTCAAAGCTTGTTTCGTGGAATTCAAGTACAGATTGTTGTTCTTGGCTCGGGATTACATGCAGTGATGATGGACGTGTTACCGGTCTTGACATCAGCAGTGAATCTATCTCCGATGGAATTGACAATTCCAGCAGTCTCTTCCATCTTCAACACCTTCAAAGTCTTAACTTGGCTGGAAACTTACTCGGTGGTGACGCTAATCTACTAGTTCCAACGGCCATTGGACAACTGAAGAATCTTAGGTATCTAAATTTATCTCAAAATTATTATTCAGGCCAAATTCCCGTTGAGATTTCATACTTGACCAAGTTGTTAGTTCTGGATATTTCTGACAATACTAGGTTGAAACTTAAGAGCCCAAATATAAACATGCTGGTTCGAAACCTTACAGAGCTCACAGAGTTGCATCTTAGTAGCGTCCAAATATCATCACAGGGGAGCCCTATTCACAAATCAGTTGCTAAGCTTAAGTCTCTATCAGTGATACAATTGCAATCGAATCGTATCTCTGCACCAATTCCAGGTTTTTTTGCCAGCTTTTCAAATTTGACTTTCTTGGGTCTCAGCGATTGCAGCTTGCAGGGAATATTTCCCAAAGAGATATTTCAGGTACCTTCTCTGCGAAGGATTAACCTTTTGAGAAATTTTGAAGTTGGTGGCTCCTTGCCAGAATTTCCAGAAAATGGATATCTGCGGTCCTTGATTCTTGCTCAATCAAACTTTTCAGGGTTACTACCAAACTCAATTGGCAACCTCGCGATGTTGTCCACAGTAGATATATCAAGCTGCAATTTCACCGGACCATTACCAAAGTCGATGGCAAACCTTACGCAATTGATTAGTATTGAAATGGATAGAAATAACTTTGAAGGTTCAATTCCATGTTTTGATAGGGCCAAGAATCTGGAGAAAATAGACCTTTCTTACAATTGTCTAACCGGTAGTATCAGTTGCACCTGGGGAAACCTTTCTAACTTGAACTTTCTCAGCCTGCATCACAATATGGTCGACGGTAATATCCCATCCTCTTTGTTTTCTCATACATCAATAATTGAATTGGTTCTTTCCAAGAATCAGTTCACAGGTCAACCCCCTAAACTTTCTGTTAACTATTCCTACTCCATGGAGTCGCTTGTTTTGAATAGCAACAATCTGGAAGGTCCGATACCCATGTCCATCTTTAATTTTCGAAGGCTTCAGATTCTTGATCTTTCTTCAAACAATTTAAGCGACTCATTTCCTCTTGATGGCTTTCGACATCAAAGAAGTCTGGAGGAACTTGATCTTTCCTACAACAACATTTTTCTTAGCTATGATAATAGAAATTTCTCATATTCATCCTTCCCTCAACTTCGAGTATTGATGTTAGCTTCTGGAAATTTGAGAACATTCCCTGTTTTCTTGAAAAATCAATCCCAATTGTTTGATTTGGATCTTTCAAATAACCAAATATGTGGTGAGGTACCTAATTGGATATGGAAGTTCAAGAGTCTTATTTCACTAAATCTATCATGTAACTCCCTAGATGCTTTAGAAGCTTCTTCAGTATCTAATCTCAGTTTTCTGGGATTGCTGGATATTCATTCCAACAACTTTCAAGGACAAATCCCAACGATCTCATCACCAAATCTTTATTATCTAGATTACTCGAGGAATGGTTTCAACTCCAAGATACCAACCATCGTTGGAAATACACTTCTTGAAACTGCATTCATTTCTCTTTCGAGCAATAACCTCCACGGGGCCATTCCACGATCAATGTGCAAATCACTGCGTCTTGAGGTTCTTGATTTGTCTAATAATTCTCTCAGTGGTATGGTTCCTAAGTGTTTGACTACAATGACCACTCTTGCTGTACTTAATTTGAAGAGAAATAACCTTACAAAGGTTGACTTGTTGTCCAAGAATTGCAGCTTAGAAACTCTCGACATCAGTGAAAATCGTATACAAGGCCATTTTCTAGAATCTCTTGTAAACTGCAGAAAGTTAAAGGTTTTAAACCTTGGAAGCAATCAGATAGCATATCAGTTTCCTTGCTTTTTGAAGAACATATCCACTTTGCGTGTTCTCAATGGCGGACCTAGGATTTTAGATTGGGAAACTAGTGGAACCTGGCCAGTGCTTCAAATCATAGACCTAGCCGACAACGATTTTAGTGGTGAAATACCTGCTAAAGCTTTGGTGACATGGCAGGCAATGATGGTTAAACAAGATGATTCCCCAACAAAGCTCAATCACCTTCAATTTCAAGACGATGTCGATACGAGGATCTATTACCAAGATACAATTACAGTTACCAACAAAGGTATAAAGATGGAGCTAGTAAAGATTCTAACTGTCTTCACCTCGATTGACTTCTCAAACAATAAGTTTGAGGGATCGATACCAAAGGAAATTGGAGCATTCAAATCGTTGTATGCCCTCAACTTGTCAACTAATGCTTTCACAGGAGCAATCCCTGAATCATTTAGCAGCTTGAGTCAACTAGAGTCGCTAGACATCTCAAAGAACAACCTGAGCGGGCAAATTCCACCACAACTTACACAACTCACTTTCCTTTCGTTTTTGAATCTCTCATATAATCATCTTGTGGGAAGGATTCCAAGCGGTAACCAATTTTCAACATTTTCAAGAGATTCATTTGAAGGCAATAATGATTTATCCGGACCTCCCTTGACTGGATATAACAACACGCCAGGGTCTCCACCAGCAACATCAAATGAGATTCATCCGAACCCAAGAGATCAGGTTGATTGGGATCTTATCAGTGTCGAAGTTGGGTTTATATCTGGGTTTGGAATTGTGATTGGGTCACCTTTGTTTTGCAAGAGATGGAGGAAATGGTACCATAGAGCTATGTGTAACATCCTTTTAAAGATGTTCCCTCGATTGGAAGAGAAAATATGTACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1020

Amino Acids

113.08

Weight (kDa)

6.45

Isoelectric Point (pI)

36.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 30 - 70 2.3e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 91 - 217 5.3e-09 Leucine-rich repeat region
LRR_14 PF23598 277 - 391 3.2e-07 Leucine-rich repeat region
LRR_8 PF13855 424 - 483 4.1e-07 Leucine rich repeat
LRR_8 PF13855 853 - 912 1.3e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2323
Acc65I GGTACC 3 cut(s) 757, 1609, 2991
AccB1I GGYRCC 3 cut(s) 757, 1609, 2991
AccB7I CCANNNNNTGG 2 cut(s) 94, 830
AccBSI CCGCTC 1 cut(s) 2667
AccI GTMKAC 2 cut(s) 1155, 2092
AccII CGCG 1 cut(s) 905
AccIII TCCGGA 1 cut(s) 2810
AciI CCGC 4 cut(s) 841, 2223, 2667, 2754
AclWI GGATC 4 cut(s) 1587, 2423, 2533, 2913
AcoI YGGCCR 2 cut(s) 363, 2261
AcsI RAATTY 9 cut(s) 166, 397, 426, 691, 790, 818, 1471, 1525, 2673
AcuI CTGAAG 3 cut(s) 398, 1328, 1674
AfaI GTAC 6 cut(s) 175, 759, 1611, 2004, 2993, 3055
AfiI CCNNNNNNNGG 8 cut(s) 94, 668, 830, 1394, 1888, 2032, 2825, 3037
AflII CTTAAG 2 cut(s) 497, 614
AflIII ACRYGT 1 cut(s) 220
AgeI ACCGGT 2 cut(s) 227, 1085
AhdI GACNNNNNGTC 1 cut(s) 2044
AhlI ACTAGT 2 cut(s) 352, 2249
AjiI CACGTC 1 cut(s) 221
AjnI CCWGG 4 cut(s) 667, 1103, 2258, 2842
AjuI GAANNNNNNNTTGG 2 cut(s) 1208, 1240
Alw21I GWGCWC 1 cut(s) 543
Alw26I GTCTC 5 cut(s) 78, 287, 624, 713, 2853
AlwI GGATC 4 cut(s) 1587, 2423, 2533, 2913
AlwNI CAGNNNCTG 1 cut(s) 94
Ama87I CYCGRG 2 cut(s) 194, 1795
Aor13HI TCCGGA 1 cut(s) 2810
AoxI GGCC 6 cut(s) 363, 421, 1041, 1890, 2098, 2261
ApeKI GCWGC 6 cut(s) 69, 91, 720, 933, 2058, 2619
ApoI RAATTY 9 cut(s) 166, 397, 426, 691, 790, 818, 1471, 1525, 2673
AsiGI ACCGGT 2 cut(s) 227, 1085
Asp700I GAANNNNTTC 4 cut(s) 1114, 1206, 1223, 1805
Asp718I GGTACC 3 cut(s) 757, 1609, 2991
AspA2I CCTAGG 1 cut(s) 2228
AspS9I GGNCC 7 cut(s) 843, 947, 1041, 1307, 1890, 2225, 2813
AsuHPI GGTGA 9 cut(s) 350, 934, 1616, 1761, 2318, 2341, 2375, 2482, 2952
AsuII TTCGAA 2 cut(s) 526, 1336
AvaI CYCGRG 2 cut(s) 194, 1795
AvaII GGWCC 5 cut(s) 843, 947, 1307, 2225, 2813
AvrII CCTAGG 1 cut(s) 2228
BaeI ACNNNNGTAYC 2 cut(s) 1304, 1337
BalI TGGCCA 1 cut(s) 2263
BanI GGYRCC 3 cut(s) 757, 1609, 2991
BanII GRGCYC 3 cut(s) 506, 543, 590
BarI GAAGNNNNNNTAC 2 cut(s) 1296, 1328
BbsI GAAGAC 1 cut(s) 2479
Bbv12I GWGCWC 1 cut(s) 543
BbvI GCAGC 6 cut(s) 81, 103, 732, 920, 2070, 2631
BceAI ACGGC 1 cut(s) 378
BcgI CGANNNNNNTGC 8 cut(s) 61, 95, 629, 663, 1890, 1924, 2538, 2572
BciT130I CCWGG 4 cut(s) 669, 1105, 2260, 2844
BcoDI GTCTC 5 cut(s) 78, 287, 624, 713, 2853
BcuI ACTAGT 2 cut(s) 352, 2249
BfmI CTRYAG 1 cut(s) 2125
BfrI CTTAAG 2 cut(s) 497, 614
BfuAI ACCTGC 1 cut(s) 2323
BisI GCNGC 6 cut(s) 70, 92, 721, 934, 2059, 2620
BlnI CCTAGG 1 cut(s) 2228
BlpI GCTNAGC 1 cut(s) 609
BlsI GCNGC 6 cut(s) 71, 93, 722, 935, 2060, 2621
Bme1390I CCNGG 4 cut(s) 669, 1105, 2260, 2844
Bme18I GGWCC 5 cut(s) 843, 947, 1307, 2225, 2813
BmeRI GACNNNNNGTC 1 cut(s) 2044
BmeT110I CYCGRG 2 cut(s) 194, 1795
BmgBI CACGTC 1 cut(s) 221
BmgT120I GGNCC 7 cut(s) 843, 947, 1041, 1307, 1890, 2225, 2813
BmiI GGNNCC 8 cut(s) 587, 759, 808, 1611, 1891, 1968, 2257, 2993
BmrFI CCNGG 4 cut(s) 669, 1105, 2260, 2844
BmsI GCATC 3 cut(s) 562, 1150, 1663
BpiI GAAGAC 1 cut(s) 2479
BpmI CTGGAG 2 cut(s) 1073, 1439
Bpu10I CCTNAGC 1 cut(s) 2663
Bpu1102I GCTNAGC 1 cut(s) 609
Bpu14I TTCGAA 2 cut(s) 526, 1336
BpuEI CTTGAG 2 cut(s) 1946, 2644
Bsa29I ATCGAT 1 cut(s) 2528
BsaBI GATNNNNATC 2 cut(s) 1578, 2904
BsaI GGTCTC 3 cut(s) 78, 713, 2853
BsaJI CCNNGG 6 cut(s) 1104, 1269, 1885, 2149, 2228, 2843
BsaWI WCCGGW 4 cut(s) 227, 944, 1085, 2810
Bsc4I CCNNNNNNNGG 8 cut(s) 94, 668, 830, 1394, 1888, 2032, 2825, 3037
Bse118I RCCGGY 2 cut(s) 227, 1085
Bse1I ACTGG 2 cut(s) 2264, 2830
Bse3DI GCAATG 1 cut(s) 2349
Bse8I GATNNNNATC 2 cut(s) 1578, 2904
BseAI TCCGGA 1 cut(s) 2810
BseBI CCWGG 4 cut(s) 669, 1105, 2260, 2844
BseCI ATCGAT 1 cut(s) 2528
BseDI CCNNGG 6 cut(s) 1104, 1269, 1885, 2149, 2228, 2843
BseGI GGATG 4 cut(s) 1169, 1484, 2875, 3012
BseJI GATNNNNATC 2 cut(s) 1578, 2904
BseLI CCNNNNNNNGG 8 cut(s) 94, 668, 830, 1394, 1888, 2032, 2825, 3037
BseMI GCAATG 1 cut(s) 2349
BseMII CTCAG 5 cut(s) 724, 1147, 1717, 1969, 2654
BseNI ACTGG 2 cut(s) 2264, 2830
BseXI GCAGC 6 cut(s) 81, 103, 732, 920, 2070, 2631
BsgI GTGCAG 1 cut(s) 642
Bsh1236I CGCG 1 cut(s) 905
BshFI GGCC 6 cut(s) 365, 423, 1043, 1892, 2100, 2263
BshNI GGYRCC 3 cut(s) 757, 1609, 2991
BshTI ACCGGT 2 cut(s) 227, 1085
BshVI ATCGAT 1 cut(s) 2528
BsiHKAI GWGCWC 1 cut(s) 543
BsiHKCI CYCGRG 2 cut(s) 194, 1795
BsiSI CCGG 4 cut(s) 228, 945, 1086, 2811
BslI CCNNNNNNNGG 8 cut(s) 94, 668, 830, 1394, 1888, 2032, 2825, 3037
BsmAI GTCTC 5 cut(s) 78, 287, 624, 713, 2853
BsmI GAATGC 2 cut(s) 1856, 2549
BsnI GGCC 6 cut(s) 365, 423, 1043, 1892, 2100, 2263
Bso31I GGTCTC 3 cut(s) 78, 713, 2853
BsoBI CYCGRG 2 cut(s) 194, 1795
Bsp119I TTCGAA 2 cut(s) 526, 1336
Bsp1286I GDGCHC 3 cut(s) 506, 543, 590
Bsp13I TCCGGA 1 cut(s) 2810
Bsp1407I TGTACA 1 cut(s) 3053
Bsp143I GATC 9 cut(s) 1354, 1429, 1579, 1761, 1901, 2415, 2525, 2890, 2905
Bsp1720I GCTNAGC 1 cut(s) 609
Bsp19I CCATGG 1 cut(s) 1269
Bsp68I TCGCGA 1 cut(s) 905
BspACI CCGC 4 cut(s) 841, 2223, 2667, 2754
BspANI GGCC 6 cut(s) 365, 423, 1043, 1892, 2100, 2263
BspCNI CTCAG 5 cut(s) 723, 1146, 1716, 1968, 2655
BspDI ATCGAT 1 cut(s) 2528
BspEI TCCGGA 1 cut(s) 2810
BspFNI CGCG 1 cut(s) 905
BspLI GGNNCC 8 cut(s) 587, 759, 808, 1611, 1891, 1968, 2257, 2993
BspMAI CTGCAG 1 cut(s) 2129
BspMI ACCTGC 1 cut(s) 2323
BspPI GGATC 4 cut(s) 1587, 2423, 2533, 2913
BspT104I TTCGAA 2 cut(s) 526, 1336
BspT107I GGYRCC 3 cut(s) 757, 1609, 2991
BspTI CTTAAG 2 cut(s) 497, 614
BspTNI GGTCTC 3 cut(s) 78, 713, 2853
BsrBI CCGCTC 1 cut(s) 2667
BsrDI GCAATG 1 cut(s) 2349
BsrFI RCCGGY 2 cut(s) 227, 1085
BsrGI TGTACA 1 cut(s) 3053
BsrI ACTGG 2 cut(s) 2264, 2830
BssAI RCCGGY 2 cut(s) 227, 1085
BssECI CCNNGG 6 cut(s) 1104, 1269, 1885, 2149, 2228, 2843
BssMI GATC 9 cut(s) 1354, 1429, 1579, 1761, 1901, 2415, 2525, 2890, 2905
BssNAI GTATAC 1 cut(s) 2093
BssT1I CCWWGG 3 cut(s) 1269, 2149, 2228
Bst1107I GTATAC 1 cut(s) 2093
Bst2UI CCWGG 4 cut(s) 669, 1105, 2260, 2844
Bst4CI ACNGT 4 cut(s) 919, 1160, 2440, 2485
Bst6I CTCTTC 3 cut(s) 290, 2009, 3036
BstAFI CTTAAG 2 cut(s) 497, 614
BstAUI TGTACA 1 cut(s) 3053
BstBI TTCGAA 2 cut(s) 526, 1336
BstC8I GCNNGC 5 cut(s) 682, 725, 1139, 2340, 2669
BstDSI CCRYGG 2 cut(s) 1269, 1885
BstEII GGTNACC 2 cut(s) 2756, 2958
BstENI CCTNNNNNAGG 1 cut(s) 2030
BstF5I GGATG 4 cut(s) 1169, 1484, 2875, 3012
BstFNI CGCG 1 cut(s) 905
BstKTI GATC 9 cut(s) 1357, 1432, 1582, 1764, 1904, 2418, 2528, 2893, 2908
BstMAI GTCTC 5 cut(s) 78, 287, 624, 713, 2853
BstMBI GATC 9 cut(s) 1354, 1429, 1579, 1761, 1901, 2415, 2525, 2890, 2905
BstMWI GCNNNNNNNGC 2 cut(s) 720, 1682
BstNI CCWGG 4 cut(s) 669, 1105, 2260, 2844
BstNSI RCATGY 2 cut(s) 207, 520
BstPI GGTNACC 2 cut(s) 2756, 2958
BstSCI CCNGG 4 cut(s) 667, 1103, 2258, 2842
BstSFI CTRYAG 1 cut(s) 2125
BstUI CGCG 1 cut(s) 905
BstV1I GCAGC 6 cut(s) 81, 103, 732, 920, 2070, 2631
BstV2I GAAGAC 1 cut(s) 2479
BstX2I RGATCY 3 cut(s) 1579, 2415, 2905
BstXI CCANNNNNNTGG 2 cut(s) 1051, 1601
BstYI RGATCY 3 cut(s) 1579, 2415, 2905
BstZ17I GTATAC 1 cut(s) 2093
Bsu15I ATCGAT 1 cut(s) 2528
BsuRI GGCC 6 cut(s) 365, 423, 1043, 1892, 2100, 2263
BsuTUI ATCGAT 1 cut(s) 2528
BtgI CCRYGG 2 cut(s) 1269, 1885
BtgZI GCGATG 1 cut(s) 920
BtrI CACGTC 1 cut(s) 221
BtsCI GGATG 4 cut(s) 1169, 1484, 2875, 3012
BtsI GCAGTG 3 cut(s) 214, 250, 1916
BtsIMutI CAGTG 8 cut(s) 214, 250, 633, 1916, 1963, 2086, 2271, 2920
BtuMI TCGCGA 1 cut(s) 905
BveI ACCTGC 1 cut(s) 2323
Cac8I GCNNGC 5 cut(s) 682, 725, 1139, 2340, 2669
CaiI CAGNNNCTG 1 cut(s) 94
Cfr10I RCCGGY 2 cut(s) 227, 1085
Cfr13I GGNCC 7 cut(s) 843, 947, 1041, 1307, 1890, 2225, 2813
ClaI ATCGAT 1 cut(s) 2528
CseI GACGC 3 cut(s) 350, 553, 1910
Csp6I GTAC 6 cut(s) 174, 758, 1610, 2003, 2992, 3054
CspAI ACCGGT 2 cut(s) 227, 1085
CviAII CATG 8 cut(s) 10, 204, 517, 1029, 1270, 1318, 1659, 2334
CviQI GTAC 6 cut(s) 174, 758, 1610, 2003, 2992, 3054
DpnI GATC 9 cut(s) 1356, 1431, 1581, 1763, 1903, 2417, 2527, 2892, 2907
DpnII GATC 9 cut(s) 1354, 1429, 1579, 1761, 1901, 2415, 2525, 2890, 2905
DraI TTTAAA 2 cut(s) 2145, 3021
DriI GACNNNNNGTC 1 cut(s) 2044
EaeI YGGCCR 2 cut(s) 363, 2261
Eam1104I CTCTTC 3 cut(s) 290, 2009, 3036
Eam1105I GACNNNNNGTC 1 cut(s) 2044
EarI CTCTTC 3 cut(s) 290, 2009, 3036
EciI GGCGGA 1 cut(s) 2238
Ecl136II GAGCTC 1 cut(s) 541
Eco130I CCWWGG 3 cut(s) 1269, 2149, 2228
Eco24I GRGCYC 3 cut(s) 506, 543, 590
Eco31I GGTCTC 3 cut(s) 78, 713, 2853
Eco32I GATATC 1 cut(s) 836
Eco47I GGWCC 5 cut(s) 843, 947, 1307, 2225, 2813
Eco53kI GAGCTC 1 cut(s) 541
Eco57I CTGAAG 3 cut(s) 398, 1328, 1674
Eco88I CYCGRG 2 cut(s) 194, 1795
Eco91I GGTNACC 2 cut(s) 2756, 2958
EcoICRI GAGCTC 1 cut(s) 541
EcoNI CCTNNNNNAGG 1 cut(s) 2030
EcoO65I GGTNACC 2 cut(s) 2756, 2958
EcoRI GAATTC 1 cut(s) 166
EcoRII CCWGG 4 cut(s) 667, 1103, 2258, 2842
EcoRV GATATC 1 cut(s) 836
EcoT14I CCWWGG 3 cut(s) 1269, 2149, 2228
EcoT38I GRGCYC 3 cut(s) 506, 543, 590
ErhI CCWWGG 3 cut(s) 1269, 2149, 2228
FaeI CATG 8 cut(s) 13, 207, 520, 1032, 1273, 1321, 1662, 2337
FalI AAGNNNNNCTT 2 cut(s) 2024, 2056
FatI CATG 8 cut(s) 9, 203, 516, 1028, 1269, 1317, 1658, 2333
FauI CCCGC 1 cut(s) 2660
FblI GTMKAC 2 cut(s) 1155, 2092
Fnu4HI GCNGC 6 cut(s) 70, 92, 721, 934, 2059, 2620
FokI GGATG 4 cut(s) 1156, 1471, 2862, 2999
FriOI GRGCYC 3 cut(s) 506, 543, 590
Fsp4HI GCNGC 6 cut(s) 70, 92, 721, 934, 2059, 2620
GluI GCNGC 6 cut(s) 70, 92, 721, 934, 2059, 2620
GsuI CTGGAG 2 cut(s) 1073, 1439
HaeIII GGCC 6 cut(s) 365, 423, 1043, 1892, 2100, 2263
HapII CCGG 4 cut(s) 228, 945, 1086, 2811
HgaI GACGC 3 cut(s) 350, 553, 1910
Hin1II CATG 8 cut(s) 13, 207, 520, 1032, 1273, 1321, 1662, 2337
HincII GTYRAC 6 cut(s) 1156, 1235, 1255, 2038, 2580, 2630
HindII GTYRAC 6 cut(s) 1156, 1235, 1255, 2038, 2580, 2630
HindIII AAGCTT 4 cut(s) 152, 611, 1683, 2322
HpaI GTTAAC 1 cut(s) 1255
HpaII CCGG 4 cut(s) 228, 945, 1086, 2811
HphI GGTGA 9 cut(s) 350, 934, 1616, 1761, 2318, 2341, 2375, 2482, 2952
Hpy188I TCNGA 7 cut(s) 83, 259, 478, 1311, 1347, 2163, 2880
Hpy99I CGWCG 1 cut(s) 1160
HpyCH4III ACNGT 4 cut(s) 919, 1160, 2440, 2485
HpyCH4IV ACGT 1 cut(s) 220
HpyF10VI GCNNNNNNNGC 2 cut(s) 720, 1682
HpySE526I ACGT 1 cut(s) 220
Hsp92II CATG 8 cut(s) 13, 207, 520, 1032, 1273, 1321, 1662, 2337
Kpn2I TCCGGA 1 cut(s) 2810
KpnI GGTACC 3 cut(s) 761, 1613, 2995
KspAI GTTAAC 1 cut(s) 1255
Kzo9I GATC 9 cut(s) 1354, 1429, 1579, 1761, 1901, 2415, 2525, 2890, 2905
LmnI GCTCC 6 cut(s) 59, 585, 812, 2464, 2546, 2597
Lsp1109I GCAGC 6 cut(s) 81, 103, 732, 920, 2070, 2631
LweI GCATC 3 cut(s) 562, 1150, 1663
MaeII ACGT 1 cut(s) 220
MalI GATC 9 cut(s) 1356, 1431, 1581, 1763, 1903, 2417, 2527, 2892, 2907
MbiI CCGCTC 1 cut(s) 2667
MboI GATC 9 cut(s) 1354, 1429, 1579, 1761, 1901, 2415, 2525, 2890, 2905
MfeI CAATTG 6 cut(s) 63, 635, 891, 980, 1075, 1565
MflI RGATCY 3 cut(s) 1579, 2415, 2905
MhlI GDGCHC 3 cut(s) 506, 543, 590
MlsI TGGCCA 1 cut(s) 2263
MluNI TGGCCA 1 cut(s) 2263
MlyI GAGTC 5 cut(s) 1283, 1373, 1645, 2635, 2645
MmeI TCCRAC 3 cut(s) 383, 1758, 1813
Mox20I TGGCCA 1 cut(s) 2263
MroI TCCGGA 1 cut(s) 2810
MroXI GAANNNNTTC 4 cut(s) 1114, 1206, 1223, 1805
MscI TGGCCA 1 cut(s) 2263
Msp20I TGGCCA 1 cut(s) 2263
MspA1I CMGCKG 1 cut(s) 94
MspCI CTTAAG 2 cut(s) 497, 614
MspI CCGG 4 cut(s) 228, 945, 1086, 2811
MspR9I CCNGG 4 cut(s) 669, 1105, 2260, 2844
MunI CAATTG 6 cut(s) 63, 635, 891, 980, 1075, 1565
Mva1269I GAATGC 2 cut(s) 1856, 2549
MvaI CCWGG 4 cut(s) 669, 1105, 2260, 2844
MvnI CGCG 1 cut(s) 905
MwoI GCNNNNNNNGC 2 cut(s) 720, 1682
NcoI CCATGG 1 cut(s) 1269
NdeII GATC 9 cut(s) 1354, 1429, 1579, 1761, 1901, 2415, 2525, 2890, 2905
NlaIII CATG 8 cut(s) 13, 207, 520, 1032, 1273, 1321, 1662, 2337
NlaIV GGNNCC 8 cut(s) 587, 759, 808, 1611, 1891, 1968, 2257, 2993
NmuCI GTSAC 3 cut(s) 338, 2329, 2958
NruI TCGCGA 1 cut(s) 905
NspI RCATGY 2 cut(s) 207, 520
NspV TTCGAA 2 cut(s) 526, 1336
PaeR7I CTCGAG 1 cut(s) 1795
PctI GAATGC 2 cut(s) 1856, 2549
PdmI GAANNNNTTC 4 cut(s) 1114, 1206, 1223, 1805
PflFI GACNNNGTC 1 cut(s) 2402
PflMI CCANNNNNTGG 2 cut(s) 94, 830
PinAI ACCGGT 2 cut(s) 227, 1085
PkrI GCNGC 6 cut(s) 71, 93, 722, 935, 2060, 2621
PleI GAGTC 5 cut(s) 1282, 1373, 1644, 2634, 2644
PpsI GAGTC 5 cut(s) 1282, 1373, 1644, 2634, 2644
Psp124BI GAGCTC 1 cut(s) 543
Psp6I CCWGG 4 cut(s) 667, 1103, 2258, 2842
PspEI GGTNACC 2 cut(s) 2756, 2958
PspGI CCWGG 4 cut(s) 667, 1103, 2258, 2842
PspN4I GGNNCC 8 cut(s) 587, 759, 808, 1611, 1891, 1968, 2257, 2993
PspPI GGNCC 7 cut(s) 843, 947, 1041, 1307, 1890, 2225, 2813
PspXI VCTCGAGB 1 cut(s) 1795
PstI CTGCAG 1 cut(s) 2129
PstNI CAGNNNCTG 1 cut(s) 94
PsuI RGATCY 3 cut(s) 1579, 2415, 2905
PsyI GACNNNGTC 1 cut(s) 2402
PvuII CAGCTG 1 cut(s) 94
RruI TCGCGA 1 cut(s) 905
RsaI GTAC 6 cut(s) 175, 759, 1611, 2004, 2993, 3055
RsaNI GTAC 6 cut(s) 174, 758, 1610, 2003, 2992, 3054
SacI GAGCTC 1 cut(s) 543
SalI GTCGAC 1 cut(s) 1154
SatI GCNGC 6 cut(s) 70, 92, 721, 934, 2059, 2620
Sau3AI GATC 9 cut(s) 1354, 1429, 1579, 1761, 1901, 2415, 2525, 2890, 2905
Sau96I GGNCC 7 cut(s) 843, 947, 1041, 1307, 1890, 2225, 2813
SchI GAGTC 5 cut(s) 1283, 1373, 1645, 2635, 2645
ScrFI CCNGG 4 cut(s) 669, 1105, 2260, 2844
SduI GDGCHC 3 cut(s) 506, 543, 590
SfaNI GCATC 3 cut(s) 562, 1150, 1663
SfcI CTRYAG 1 cut(s) 2125
Sfr274I CTCGAG 1 cut(s) 1795
SfuI TTCGAA 2 cut(s) 526, 1336
SinI GGWCC 5 cut(s) 843, 947, 1307, 2225, 2813
SlaI CTCGAG 1 cut(s) 1795
SmlI CTYRAG 5 cut(s) 497, 614, 1795, 1925, 2623
SmoI CTYRAG 5 cut(s) 497, 614, 1795, 1925, 2623
SpeI ACTAGT 2 cut(s) 352, 2249
SsiI CCGC 4 cut(s) 841, 2223, 2667, 2754
SspI AATATT 1 cut(s) 735
SstI GAGCTC 1 cut(s) 543
StyD4I CCNGG 4 cut(s) 667, 1103, 2258, 2842
StyI CCWWGG 3 cut(s) 1269, 2149, 2228
TaaI ACNGT 4 cut(s) 919, 1160, 2440, 2485
TaiI ACGT 1 cut(s) 223
TatI WGTACW 3 cut(s) 173, 2002, 3053
TscAI CASTG 8 cut(s) 214, 250, 633, 1923, 1963, 2086, 2271, 2920
TseFI GTSAC 3 cut(s) 338, 2329, 2958
TseI GCWGC 6 cut(s) 69, 91, 720, 933, 2058, 2619
Tsp45I GTSAC 3 cut(s) 338, 2329, 2958
TspDTI ATGAA 8 cut(s) 17, 128, 432, 1473, 1718, 1849, 2775, 2864
TspGWI ACGGA 1 cut(s) 34
TspRI CASTG 8 cut(s) 214, 250, 633, 1923, 1963, 2086, 2271, 2920
Tth111I GACNNNGTC 1 cut(s) 2402
Van91I CCANNNNNTGG 2 cut(s) 94, 830
Vha464I CTTAAG 2 cut(s) 497, 614
VpaK11BI GGWCC 5 cut(s) 843, 947, 1307, 2225, 2813
XagI CCTNNNNNAGG 1 cut(s) 2030
XapI RAATTY 9 cut(s) 166, 397, 426, 691, 790, 818, 1471, 1525, 2673
XbaI TCTAGA 2 cut(s) 1786, 2107
XceI RCATGY 2 cut(s) 207, 520
XhoI CTCGAG 1 cut(s) 1795
XmaJI CCTAGG 1 cut(s) 2228
XmiI GTMKAC 2 cut(s) 1155, 2092
XmnI GAANNNNTTC 4 cut(s) 1114, 1206, 1223, 1805
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.