Rw3G019650

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0000047
Physical Location & Seq
Forward (+)
22722984 .. 22726106
3123 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G019650.1

Sequence Viewer

Length: 3123 bp
ATGCCAACTCTGTTCCTCCATTTCTTCCTTTTCTTATTCACCACCACTGTTACTAACCTCATCCCCGCAGTTCACAGCAACTGTATTGAAGCCCAGAAACAATCATTGCTCCATTTCAAGAAAGGTCTTGAATTTTATTCTTCCTCTTCCTCCAAGCTTATCACATGGAATTCGACTACCGACTGCTGTTCTTGGCTCGGTGTAACTTGCAGCACTAATGGGCGTGTTGTCGGACTTGACCTCAGCAGCGAGTCTATCTCATGCTGCATTGACAATTCCAGCAGTCTCTTCCAACTTCAACATCTTCAGAGCCTCAATTTAGCCGATAACTACTTCAATGACTCTTCAATTCCATCTGCAATTGGAAAGCTTGCAAATTTGAGGTATTTGAATTTAAGTGGAGCTGATTTTTCTGGGCAAATTCCCATTGAGGTTGCACGCTTGACAAGGTTGAAGGTTCTTGATCTCTCTACATATTCCCTTCTCGAGGACAGGGTGCTTAAACTTGAGAACCCTAATTTAGGCACTTTAATCCAGAACCTTACAGAGCTTACAGAGTTAAATCTTGATCAAGTAAACCTATCAGCTGAGGGATTTCACTGGAGCCATACCATATCATCTTCACTTCCAAAGCTGAGTGTGTTGACCTTGCACGATTGTGATCTTTCAGGCCCTATTCATGAATCATTTGCCAGGCTTCATTCTCTATCCATTTTAATATTGGATAACAACAACATCTCTGCTCCAGTTCCAAAAAATTTTGCCAATTTTTCAAGCTTGATTTCCCTAGATCTCTCACATTGTAACCTCCATGGAGCATTTCCCAAAGAGATATTCCAGGTGTCTACACTACAATCTGTTGGCCTATTTGGTAATTTAGAGCTTCGTGGTTCCTTGCCGGAGTTTTCAAAGAATGGATCTCTCGAATCCCTAGTTCTATCTCGGACGAAGTTTTCAGGAGTCTTGCCAGACTCTATTGGCAACCTTAAAAAGCTGTCTGAATTAAAACTTTCAGAGTGCAATTTCGCAGGAGCAGTTCCAAAGTCACTGGCAAACCTAACACAATTGGGGAGTTTGGACTTGTCATACAACAAGTTTTCTAGTCCGATTAATTCTATCCAATGGGACAAACTCATCAAGCTTGAGCAGCTCGACTTATCCAACAATCTACTCTACGGGAGCATTCCATTGTCTCCCTTTTCTATTCCCTTGCTGCAGATATTACGACTTTCTGGAAATCACTTCTCTGGTCAGTTGCTTGAATTTTCTAATGTCTCTTCATACTTGCTGTACCATCTTGATTTGAGTAGCAACAATTTGGAAGGATCAATACCTGTGTCTATCTTTAATCTTCCAAAGCTTCTTGAGCTTCATCTTTATAGGAACAACTTGAGTGGTTTTCCTTTTTATGGCCTTCAGGAGTCACGAAATCTTTCGGTTCTTGATCTATCCGACAATAGCTTGTTGTTCAATCATAATGGTACCAACTCATCACCGCCCTCCCTCCTTCAGTTTGGGTCCTTGAATTTGGCTTCTAACAAGTTCAAAACATTCCCAAATTTCTTGAAAAATCAATCTTATTTATGGGACTTGAACATTTCAGACAACAAAATTCCAGGTCAGATACCTAATTGGATTTGGGAGCTTCCTCTCGAGAATCTATATCTATGTTGTAACAAGTTGGTAAGTCTACAAGCTCCTTTACTTGGTTCTACTTACCAACTGATGAATCTTGATCTTCACTCAAACCAGATTCAGGGACAAATACCATTGTTTGTAAATGCTGATTATTTGGATTACTCGAGAAATAATTTCAGCTCTAGTATGCCAACTGACATTGGTGATTTCATTTTTACCAACTACCTTTCTCTTTCAAGCAGTAACTTGTATGGGGAAATTCCAAAGTCAATATGCAATGCAAGTTTTGAAATTCTTGATCTCTCTAGTAACTCTTTGAGTGGAATCATTCCCCAATGCTTGACTCAGACTTCTCTTTCTATCCTTGATTTGAGGAGAAACAACCTTACTGGACCTATCCCCGATAGTTTTCATAAAGGTTGTGCTTTGCAGACTCTAGCTCTGGGCAGAAATCAGATACGAGGTCAATTTCCAAAATCTCTAGCCAATTGTTCAAGCTTAGAGGTTTTAGACTTCGGAATCAATCAAATAACGGATGCCTTTCCCTGCCAGTTGAAGGCCATATCCACCTTGCATGTCCTTATGTTGCGATCGAACAAATTTTATGGACCCATTGGATGTCCTGAGACCAATGGCACCTGGCCGAAGCTTCAAGTCATAGACTTAGCTCATAACAGTTTCAATGGTGAAATACCGGGTACATCATTGACAACATGGCAGGCAATGGTGGTTAATGAAGATGATTACCAAGATTACCTTAGCTATGATTATGAAGGTGGTGATAGTGGGTTCTCTGTTGACTATGGGGATACAATAACAACCATCATCAAAGGTTTGGAGTTGGATTCGATAAAGATTCTAACTATCTTCACCTTGATTGATTTCTCTTCCAACAATTTTAGCGGATCAATACCCAAGGAAATGGGCGAACTGAGATCATTATATGTCCTCAATCTGTCCAGTAATGCTTTCACAGGAGAAATCCCAGCATCCTTTGGTAACATGACAAGCATAGAGTCCTTAGACCTCTCACAGAACCAACTGAGAGGCCAAATTCCACCGCAGCTTTCAACTCTCACTTTCCTTTCGCACTTGAATGTCTCATATAATCAACTGACGGGAAGGATCCCAACCAGCACTCAGTTTTCAACATTTCCAAATACCTCCTTCGAGGGTAACAAAGGATTATGGGGGCCTCCTCTGACATGGGATACAGCAATCGTATTGCCACCTCCAACGTTTAATGGAAGCTCAAGTAATTCGAATTCTGGAGATGAGATTGATTGGAATGTTATCAGTGTTGAAATTGGATTTGCATGTGGGTTTGGAATTGCCGTCGGGTCACTTCTGTTTTGCAAGAGATGGAGGAAATGGTACTACAGATTTATGTTTAACATCCTGTTCAAGATGTTCCCTCAGCTGGAACACAGATTTGGTAATCACAGAAGGCATGTTTACATAAATCAAAGGTATTGGAGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1040

Amino Acids

115.72

Weight (kDa)

5.71

Isoelectric Point (pI)

36.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 71 2.9e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 86 - 189 9.9e-08 Leucine-rich repeat region
LRR_14 PF23598 207 - 410 1.2e-08 Leucine-rich repeat region
LRR_8 PF13855 210 - 270 7.7e-06 Leucine rich repeat
LRR_8 PF13855 307 - 366 1.6e-06 Leucine rich repeat
LRR_8 PF13855 430 - 488 3.1e-06 Leucine rich repeat
LRR_8 PF13855 664 - 723 8.9e-07 Leucine rich repeat
LRR_8 PF13855 858 - 918 2.1e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1481
AccB1I GGYRCC 2 cut(s) 1481, 2273
AccI GTMKAC 2 cut(s) 845, 1690
AciI CCGC 4 cut(s) 66, 1496, 2541, 2699
AclI AACGTT 1 cut(s) 2876
AclWI GGATC 5 cut(s) 925, 1333, 2551, 2758, 2771
AcoI YGGCCR 1 cut(s) 2279
AcuI CTGAAG 3 cut(s) 290, 1400, 1493
AfaI GTAC 4 cut(s) 1292, 1483, 2338, 3014
AfiI CCNNNNNNNGG 7 cut(s) 487, 521, 1409, 1706, 1756, 2194, 3058
AjnI CCWGG 4 cut(s) 692, 837, 1615, 2276
AjuI GAANNNNNNNTTGG 4 cut(s) 818, 850, 3054, 3086
AleI CACNNNNGTG 1 cut(s) 657
Alw26I GTCTC 6 cut(s) 290, 1197, 1279, 2258, 2743, 3109
AlwI GGATC 5 cut(s) 925, 1333, 2551, 2758, 2771
AlwNI CAGNNNCTG 1 cut(s) 81
Ama87I CYCGRG 3 cut(s) 485, 1652, 1801
AoxI GGCC 7 cut(s) 670, 862, 1411, 2196, 2279, 2686, 2831
ApeKI GCWGC 6 cut(s) 210, 246, 264, 1147, 1213, 2701
AseI ATTAAT 1 cut(s) 1110
Asp700I GAANNNNTTC 1 cut(s) 1432
Asp718I GGTACC 1 cut(s) 1481
AspS9I GGNCC 5 cut(s) 671, 1518, 2030, 2246, 2831
AsuC2I CCSGG 1 cut(s) 2334
AsuHPI GGTGA 6 cut(s) 31, 1485, 1853, 2336, 2429, 2500
AsuII TTCGAA 1 cut(s) 2900
AvaI CYCGRG 3 cut(s) 485, 1652, 1801
AvaII GGWCC 3 cut(s) 1518, 2030, 2246
BamHI GGATCC 1 cut(s) 2763
BanI GGYRCC 2 cut(s) 1481, 2273
BarI GAAGNNNNNNTAC 2 cut(s) 1314, 1346
BbvCI CCTCAGC 3 cut(s) 242, 588, 3054
BbvI GCAGC 6 cut(s) 222, 251, 258, 1159, 1200, 2713
BccI CCATC 4 cut(s) 361, 1302, 2468, 2994
BceAI ACGGC 1 cut(s) 2957
BciT130I CCWGG 4 cut(s) 694, 839, 1617, 2278
BciVI GTATCC 2 cut(s) 2440, 2842
BclI TGATCA 1 cut(s) 568
BcnI CCSGG 1 cut(s) 2334
BcoDI GTCTC 6 cut(s) 290, 1197, 1279, 2258, 2743, 3109
BfaI CTAG 7 cut(s) 788, 932, 1101, 1821, 1944, 2075, 2120
BfmI CTRYAG 2 cut(s) 1214, 3016
BfuI GTATCC 2 cut(s) 2440, 2842
BglII AGATCT 1 cut(s) 790
BisI GCNGC 6 cut(s) 211, 247, 265, 1148, 1214, 2702
BlsI GCNGC 6 cut(s) 212, 248, 266, 1149, 1215, 2703
Bme1390I CCNGG 5 cut(s) 694, 839, 1617, 2278, 2334
Bme18I GGWCC 3 cut(s) 1518, 2030, 2246
BmeT110I CYCGRG 3 cut(s) 485, 1652, 1801
BmgT120I GGNCC 5 cut(s) 671, 1518, 2030, 2246, 2831
BmiI GGNNCC 8 cut(s) 605, 892, 1483, 1519, 2248, 2275, 2765, 2832
BmrFI CCNGG 5 cut(s) 694, 839, 1617, 2278, 2334
BmsI GCATC 2 cut(s) 2164, 2636
BplI GAGNNNNNCTC 2 cut(s) 242, 274
BpmI CTGGAG 3 cut(s) 622, 729, 2928
Bpu10I CCTNAGC 4 cut(s) 242, 588, 2396, 3054
Bpu14I TTCGAA 1 cut(s) 2900
BpuEI CTTGAG 5 cut(s) 527, 1163, 1385, 1411, 2875
BpuMI CCSGG 1 cut(s) 2334
BsaBI GATNNNNATC 1 cut(s) 660
BsaI GGTCTC 1 cut(s) 2258
BsaJI CCNNGG 2 cut(s) 811, 2553
Bsc4I CCNNNNNNNGG 7 cut(s) 487, 521, 1409, 1706, 1756, 2194, 3058
Bse1I ACTGG 6 cut(s) 605, 746, 1053, 2032, 2188, 2598
Bse3DI GCAATG 3 cut(s) 104, 1921, 2367
Bse8I GATNNNNATC 1 cut(s) 660
BseBI CCWGG 4 cut(s) 694, 839, 1617, 2278
BseDI CCNNGG 2 cut(s) 811, 2553
BseGI GGATG 5 cut(s) 60, 2179, 2261, 2627, 3033
BseJI GATNNNNATC 1 cut(s) 660
BseLI CCNNNNNNNGG 7 cut(s) 487, 521, 1409, 1706, 1756, 2194, 3058
BseMI GCAATG 3 cut(s) 104, 1921, 2367
BseMII CTCAG 9 cut(s) 256, 579, 626, 1997, 2253, 2561, 2672, 2792, 3068
BseNI ACTGG 6 cut(s) 605, 746, 1053, 2032, 2188, 2598
BseRI GAGGAG 2 cut(s) 2026, 2826
BseXI GCAGC 6 cut(s) 222, 251, 258, 1159, 1200, 2713
BseYI CCCAGC 1 cut(s) 2623
Bsh1285I CGRYCG 1 cut(s) 2231
BshFI GGCC 7 cut(s) 672, 864, 1413, 2198, 2281, 2688, 2833
BshNI GGYRCC 2 cut(s) 1481, 2273
BsiEI CGRYCG 1 cut(s) 2231
BsiHKCI CYCGRG 3 cut(s) 485, 1652, 1801
BsiSI CCGG 2 cut(s) 899, 2333
BslFI GGGAC 3 cut(s) 1139, 1601, 1773
BslI CCNNNNNNNGG 7 cut(s) 487, 521, 1409, 1706, 1756, 2194, 3058
BsmAI GTCTC 6 cut(s) 290, 1197, 1279, 2258, 2743, 3109
BsmBI CGTCTC 1 cut(s) 3109
BsmFI GGGAC 3 cut(s) 1139, 1601, 1773
BsmI GAATGC 1 cut(s) 1182
BsnI GGCC 7 cut(s) 672, 864, 1413, 2198, 2281, 2688, 2833
Bso31I GGTCTC 1 cut(s) 2258
BsoBI CYCGRG 3 cut(s) 485, 1652, 1801
Bsp119I TTCGAA 1 cut(s) 2900
Bsp19I CCATGG 1 cut(s) 811
BspACI CCGC 4 cut(s) 66, 1496, 2541, 2699
BspANI GGCC 7 cut(s) 672, 864, 1413, 2198, 2281, 2688, 2833
BspCNI CTCAG 9 cut(s) 255, 580, 627, 1996, 2254, 2562, 2673, 2791, 3067
BspHI TCATGA 1 cut(s) 679
BspLI GGNNCC 8 cut(s) 605, 892, 1483, 1519, 2248, 2275, 2765, 2832
BspMAI CTGCAG 1 cut(s) 1218
BspPI GGATC 5 cut(s) 925, 1333, 2551, 2758, 2771
BspT104I TTCGAA 1 cut(s) 2900
BspT107I GGYRCC 2 cut(s) 1481, 2273
BspTNI GGTCTC 1 cut(s) 2258
BsrDI GCAATG 3 cut(s) 104, 1921, 2367
BsrI ACTGG 6 cut(s) 605, 746, 1053, 2032, 2188, 2598
BssECI CCNNGG 2 cut(s) 811, 2553
BssT1I CCWWGG 2 cut(s) 811, 2553
Bst2UI CCWGG 4 cut(s) 694, 839, 1617, 2278
Bst4CI ACNGT 3 cut(s) 49, 83, 2315
Bst6I CTCTTC 5 cut(s) 151, 293, 349, 1282, 2530
BstBI TTCGAA 1 cut(s) 2900
BstC8I GCNNGC 3 cut(s) 372, 439, 2358
BstDSI CCRYGG 1 cut(s) 811
BstENI CCTNNNNNAGG 2 cut(s) 485, 519
BstF5I GGATG 5 cut(s) 60, 2179, 2261, 2627, 3033
BstMAI GTCTC 6 cut(s) 290, 1197, 1279, 2258, 2743, 3109
BstMCI CGRYCG 1 cut(s) 2231
BstMWI GCNNNNNNNGC 2 cut(s) 1147, 1366
BstNI CCWGG 4 cut(s) 694, 839, 1617, 2278
BstNSI RCATGY 3 cut(s) 2216, 2958, 3092
BstSCI CCNGG 5 cut(s) 692, 837, 1615, 2276, 2332
BstSFI CTRYAG 2 cut(s) 1214, 3016
BstV1I GCAGC 6 cut(s) 222, 251, 258, 1159, 1200, 2713
BstX2I RGATCY 3 cut(s) 790, 917, 2763
BstXI CCANNNNNNTGG 1 cut(s) 2560
BstYI RGATCY 3 cut(s) 790, 917, 2763
BsuI GTATCC 2 cut(s) 2440, 2842
BsuRI GGCC 7 cut(s) 672, 864, 1413, 2198, 2281, 2688, 2833
BtgI CCRYGG 1 cut(s) 811
BtsCI GGATG 5 cut(s) 60, 2179, 2261, 2627, 3033
BtsIMutI CAGTG 4 cut(s) 45, 598, 1046, 2941
Cac8I GCNNGC 3 cut(s) 372, 439, 2358
CaiI CAGNNNCTG 1 cut(s) 81
CciI TCATGA 1 cut(s) 679
Cfr13I GGNCC 5 cut(s) 671, 1518, 2030, 2246, 2831
Csp6I GTAC 4 cut(s) 1291, 1482, 2337, 3013
CspCI CAANNNNNGTGG 2 cut(s) 1375, 1410
CviQI GTAC 4 cut(s) 1291, 1482, 2337, 3013
EaeI YGGCCR 1 cut(s) 2279
Eam1104I CTCTTC 5 cut(s) 151, 293, 349, 1282, 2530
EarI CTCTTC 5 cut(s) 151, 293, 349, 1282, 2530
Eco130I CCWWGG 2 cut(s) 811, 2553
Eco31I GGTCTC 1 cut(s) 2258
Eco47I GGWCC 3 cut(s) 1518, 2030, 2246
Eco57I CTGAAG 3 cut(s) 290, 1400, 1493
Eco88I CYCGRG 3 cut(s) 485, 1652, 1801
EcoNI CCTNNNNNAGG 2 cut(s) 485, 519
EcoO109I RGGNCCY 3 cut(s) 671, 1518, 2831
EcoRI GAATTC 2 cut(s) 169, 2902
EcoRII CCWGG 4 cut(s) 692, 837, 1615, 2276
EcoT14I CCWWGG 2 cut(s) 811, 2553
ErhI CCWWGG 2 cut(s) 811, 2553
Esp3I CGTCTC 1 cut(s) 3109
FalI AAGNNNNNCTT 2 cut(s) 2379, 2411
FaqI GGGAC 3 cut(s) 1139, 1601, 1773
FauI CCCGC 1 cut(s) 73
FbaI TGATCA 1 cut(s) 568
FblI GTMKAC 2 cut(s) 845, 1690
Fnu4HI GCNGC 6 cut(s) 211, 247, 265, 1148, 1214, 2702
FokI GGATG 5 cut(s) 47, 2186, 2268, 2614, 3020
Fsp4HI GCNGC 6 cut(s) 211, 247, 265, 1148, 1214, 2702
FspBI CTAG 7 cut(s) 788, 932, 1101, 1821, 1944, 2075, 2120
GluI GCNGC 6 cut(s) 211, 247, 265, 1148, 1214, 2702
GsaI CCCAGC 1 cut(s) 2627
GsuI CTGGAG 3 cut(s) 622, 729, 2928
HaeIII GGCC 7 cut(s) 672, 864, 1413, 2198, 2281, 2688, 2833
HapII CCGG 2 cut(s) 899, 2333
HincII GTYRAC 2 cut(s) 645, 2437
HindII GTYRAC 2 cut(s) 645, 2437
HindIII AAGCTT 7 cut(s) 155, 368, 775, 1139, 1358, 2134, 2285
HpaII CCGG 2 cut(s) 899, 2333
HphI GGTGA 6 cut(s) 31, 1485, 1853, 2336, 2429, 2500
Hpy166II GTNNAC 7 cut(s) 73, 577, 645, 846, 1691, 2437, 3094
Hpy8I GTNNAC 7 cut(s) 73, 577, 645, 846, 1691, 2437, 3094
Hpy99I CGWCG 1 cut(s) 2978
HpyCH4III ACNGT 3 cut(s) 49, 83, 2315
HpyCH4IV ACGT 2 cut(s) 2876, 3118
HpyF10VI GCNNNNNNNGC 2 cut(s) 1147, 1366
HpySE526I ACGT 2 cut(s) 2876, 3118
KpnI GGTACC 1 cut(s) 1485
Ksp22I TGATCA 1 cut(s) 568
LmnI GCTCC 9 cut(s) 114, 401, 603, 748, 815, 1031, 1179, 1642, 1702
Lsp1109I GCAGC 6 cut(s) 222, 251, 258, 1159, 1200, 2713
LweI GCATC 2 cut(s) 2164, 2636
MaeI CTAG 7 cut(s) 788, 932, 1101, 1821, 1944, 2075, 2120
MaeII ACGT 2 cut(s) 2876, 3118
MfeI CAATTG 3 cut(s) 360, 1064, 2125
MflI RGATCY 3 cut(s) 790, 917, 2763
MlyI GAGTC 8 cut(s) 260, 335, 965, 969, 1430, 1975, 2065, 2663
MmeI TCCRAC 7 cut(s) 211, 316, 1185, 1476, 2460, 2553, 2897
MroXI GAANNNNTTC 1 cut(s) 1432
MslI CAYNNNNRTG 2 cut(s) 657, 2733
MspA1I CMGCKG 2 cut(s) 587, 3058
MspI CCGG 2 cut(s) 899, 2333
MspR9I CCNGG 5 cut(s) 694, 839, 1617, 2278, 2334
MunI CAATTG 3 cut(s) 360, 1064, 2125
Mva1269I GAATGC 1 cut(s) 1182
MvaI CCWGG 4 cut(s) 694, 839, 1617, 2278
MwoI GCNNNNNNNGC 2 cut(s) 1147, 1366
NciI CCSGG 1 cut(s) 2334
NcoI CCATGG 1 cut(s) 811
NlaIV GGNNCC 8 cut(s) 605, 892, 1483, 1519, 2248, 2275, 2765, 2832
NmuCI GTSAC 3 cut(s) 1044, 1422, 2979
NspI RCATGY 3 cut(s) 2216, 2958, 3092
NspV TTCGAA 1 cut(s) 2900
OliI CACNNNNGTG 1 cut(s) 657
PaeR7I CTCGAG 3 cut(s) 485, 1652, 1801
PagI TCATGA 1 cut(s) 679
PctI GAATGC 1 cut(s) 1182
PdmI GAANNNNTTC 1 cut(s) 1432
PfeI GAWTC 9 cut(s) 683, 926, 1657, 1729, 1753, 1962, 2157, 2483, 2494
PkrI GCNGC 6 cut(s) 212, 248, 266, 1149, 1215, 2703
Ple19I CGATCG 1 cut(s) 2231
PleI GAGTC 8 cut(s) 259, 335, 965, 968, 1429, 1975, 2065, 2662
PpsI GAGTC 8 cut(s) 259, 335, 965, 968, 1429, 1975, 2065, 2662
PpuMI RGGWCCY 1 cut(s) 1518
PshBI ATTAAT 1 cut(s) 1110
Psp1406I AACGTT 1 cut(s) 2876
Psp5II RGGWCCY 1 cut(s) 1518
Psp6I CCWGG 4 cut(s) 692, 837, 1615, 2276
PspFI CCCAGC 1 cut(s) 2623
PspGI CCWGG 4 cut(s) 692, 837, 1615, 2276
PspN4I GGNNCC 8 cut(s) 605, 892, 1483, 1519, 2248, 2275, 2765, 2832
PspPI GGNCC 5 cut(s) 671, 1518, 2030, 2246, 2831
PspPPI RGGWCCY 1 cut(s) 1518
PstI CTGCAG 1 cut(s) 1218
PstNI CAGNNNCTG 1 cut(s) 81
PsuI RGATCY 3 cut(s) 790, 917, 2763
PvuI CGATCG 1 cut(s) 2231
PvuII CAGCTG 2 cut(s) 587, 3058
RsaI GTAC 4 cut(s) 1292, 1483, 2338, 3014
RsaNI GTAC 4 cut(s) 1291, 1482, 2337, 3013
RseI CAYNNNNRTG 2 cut(s) 657, 2733
SatI GCNGC 6 cut(s) 211, 247, 265, 1148, 1214, 2702
Sau96I GGNCC 5 cut(s) 671, 1518, 2030, 2246, 2831
SchI GAGTC 8 cut(s) 260, 335, 965, 969, 1430, 1975, 2065, 2663
ScrFI CCNGG 5 cut(s) 694, 839, 1617, 2278, 2334
SfaNI GCATC 2 cut(s) 2164, 2636
SfcI CTRYAG 2 cut(s) 1214, 3016
Sfr274I CTCGAG 3 cut(s) 485, 1652, 1801
SfuI TTCGAA 1 cut(s) 2900
SinI GGWCC 3 cut(s) 1518, 2030, 2246
SlaI CTCGAG 3 cut(s) 485, 1652, 1801
SmiMI CAYNNNNRTG 2 cut(s) 657, 2733
SmlI CTYRAG 8 cut(s) 485, 506, 1142, 1364, 1390, 1652, 1801, 2890
SmoI CTYRAG 8 cut(s) 485, 506, 1142, 1364, 1390, 1652, 1801, 2890
SsiI CCGC 4 cut(s) 66, 1496, 2541, 2699
SspI AATATT 1 cut(s) 720
SspMI CTAG 7 cut(s) 788, 932, 1101, 1821, 1944, 2075, 2120
StyD4I CCNGG 5 cut(s) 692, 837, 1615, 2276, 2332
StyI CCWWGG 2 cut(s) 811, 2553
TaaI ACNGT 3 cut(s) 49, 83, 2315
TaiI ACGT 2 cut(s) 2879, 3121
TfiI GAWTC 9 cut(s) 683, 926, 1657, 1729, 1753, 1962, 2157, 2483, 2494
TscAI CASTG 4 cut(s) 52, 605, 1053, 2941
TseFI GTSAC 3 cut(s) 1044, 1422, 2979
TseI GCWGC 6 cut(s) 210, 246, 264, 1147, 1213, 2701
Tsp45I GTSAC 3 cut(s) 1044, 1422, 2979
TspGWI ACGGA 1 cut(s) 2186
TspRI CASTG 4 cut(s) 52, 605, 1053, 2941
VpaK11BI GGWCC 3 cut(s) 1518, 2030, 2246
VspI ATTAAT 1 cut(s) 1110
XagI CCTNNNNNAGG 2 cut(s) 485, 519
XceI RCATGY 3 cut(s) 2216, 2958, 3092
XcmI CCANNNNNNNNNTGG 1 cut(s) 718
XhoI CTCGAG 3 cut(s) 485, 1652, 1801
XmiI GTMKAC 2 cut(s) 845, 1690
XmnI GAANNNNTTC 1 cut(s) 1432
XspI CTAG 7 cut(s) 788, 932, 1101, 1821, 1944, 2075, 2120
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.