RLG00000024854

Receptor-like protein 12

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Forward (+)
39783954 .. 39787160
3207 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000024854

Sequence Viewer

Length: 2529 bp
ATGACAATTCCTTTGTTCTCATGCCATTTCTTAATACTCATTTACTATGTTTCACTCAGTGTCCTTATACTGGTGGTCTCTGGCCAATGTGACAGCAACCAGCAGCAATCTTTGCTGCTACAATTGAAGAACAGCCTCAATTTTGACGCTGCATTATCCACAAAACTTGTGAAGTGGAATACTGCTTCAGATTACTGTTCCTGGGAAGGTGTTTTCTGCAAGCAGGGTTGTGTTATCCAACTTGACTTGAGCCGCGAATCGATTTCCGATGGACTTGATAATTCCAGTGCTCTTTTCAGTCTGCAGTACATCGAACACCTGAATTTGGCGTATAATAACTTAAATCAAACCCGGATTCCATCGGAGATCAACAAGTTGGCCAGTTTGAGTTATTTGAATCTGTCTAATGCCGGCTTTGCAGGGCAGATTCCGATTGAGATTTCGCAATTGACAAGTTGTAATCTTTTGGGCCCTATTGATGTTTCATTGTTGAAGCTTCGATCACTCTCAATCATTCACCTGGACAGTAATGACTTGTCTACTCCAGTTCCGGAGTTCTTGTCAAATTTCACAAATTTGACTTCCTTACGCCTCATGAATTCAGGGTTAAACGGTACATTCCCAAAGGAGATCTTTCGGGTACCTACACTGCAGATTATCGACTTAATTGGCAATCCAAAGCTACATGGATCGTTGCCAGACTTTCCGAATAATGGAGCTCTTCGGTCCCTGTTCCTAGCCAGGACAAATTTTTCAGGGTTATTGCCGGAATCTATTGGAAACCTCAAGATGTTGTCCAAAGTAGATCTTTCAAATTGCAGCTTCACGGGACCAATCCCAAAGTCAATGGAAAGCCTTACGGAATTGGTTTATGTGGACATAAACTACAACTCTCCAACAATCAATTCTCTGCTTGTCGCATTGAGCTTGGCTTCTGGAAACTTGAGGACATTCCCTGATTTCTTGAGGAATCAATCCAGATTGTGCTATTTGGACCTTTCACAGAACCAGATTCATGGAGAGATACCCAACTGGATTTGGAAGCCTAGTATTTTTCAACTTAATCTTTCTTGTAATTCATTGGTAACTTTTGAAGGTCCTTTTCTCAATCTCACTTCTACTTTGTCTGTGCTTGACCTTCATTCCAACCAGCTTCAGGGTCACATTCCAATATTTCCACCACTCGCCACTTATCTGGATTACTCAAGAAATAATTTCAGCTCCAGCATACCGGATCACATTGGTGATTTCCTTAATTACACCATGTTCTTGTCTCTTTCAAGCAACAACTTAAATGGTAGCATTCCAGGATCAATATGCAAAGCGACATATCTTCAGGTTCTTGATCTGTCCAATAATTCTTTGACTGGCTTCATTCCCCAGTGTTTGACTGCAATGATCGGAACTCTTGTAGTACTCAATTTAAGGAGAAACGAACTTGCTGGCACTATTCCTGACAGATTTCCTGGCTTTTGTACTTTGAAAACTCTAGACTTGAATGGAAATCATCTAGAAGGTCAGTTTCCAAAATCTCTGGCCAATTGCACAGTGTTAGAAGTTTTGAACCTTGGAAACAATCAGATAATGGATACATTTCCTTGCTTGTTGAAGAACATATCCACCTTACGTGTATTTATTTTGAGATCAAACAGATTTTATGGACGCATTGGATGTTCCAACACCACTGCTACCTGGCGAATGCTTCAAATTGTTGACATAGCACACAACAACCTCAGTGGTGAAATACCAGGAAGATGCTTGACTACATGGCAGGCAATGATCGGCAAGGAAGATGATGCCCAGTCGAAGATCAATTACCTGCAGTTTCAAGTCCTACAATTCAGTGACTTAAATTATCAGGATGCTATAACAGTTACCACCAAAGGAGTAGAAATGGAGTTGGTCAAGATTCTAACTGGTTTCACCTCTATTGACATCTCGTGCAACAATTTCAATGGATCAATCCCAACACAAGTGGGACAACTGAAAGCACTCCATGGCCTCAACTTCTCCAAGAATGCTCTCATAGGCACTATCCCACCATCATTGGGTAACCAAACACAACTGGAGTCCTTGGACCTTTCGAACAACAGACTGAGCGGGCCAATTCCACCAGAGCTTAAAGCGCTTACTTTCCTTTCATTCTTGAATCTCTCAAATAACCAACTGTCTGGTACAATACCAATGGGTAATCAGTTTTCAACATTTGCTCAATCTTCCTATGAAAACAATAAAGGATTATGTGGGTTACCTTTGTCTGTAAGATGCAGTAACATCAGCATTTCACCAGATGCAACATCCAAGGATGAAGACAAAGAGTGGGGAATTAACTGGGAACTTATCAGTGTTGAAATTGGATTTACATGTGGGTTTGGAATTGCCATCGCATCACTTTTCTTTTGCAAGAGATGGAGGATATGGTATTACAGAGCTATGCAGAGTATCCTACTGAAGATATTCCCTCAGCTGGAAGAAAGATTTGGGGATCACAGAAGGCATGTTTACATAAATCCAAGGTGGAGGCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

843

Amino Acids

93.67

Weight (kDa)

6.41

Isoelectric Point (pI)

34.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 33 - 73 3.4e-08 Leucine rich repeat N-terminal domain
LRR_8 PF13855 470 - 528 1e-06 Leucine rich repeat
LRR_4 PF12799 687 - 724 9e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1827
Acc65I GGTACC 1 cut(s) 640
AccB1I GGYRCC 1 cut(s) 640
AccBSI CCGCTC 1 cut(s) 2100
AccI GTMKAC 1 cut(s) 539
AccII CGCG 1 cut(s) 255
AccIII TCCGGA 1 cut(s) 550
AciI CCGC 2 cut(s) 253, 2100
AclWI GGATC 5 cut(s) 697, 1242, 1318, 1966, 2493
AcoI YGGCCR 3 cut(s) 82, 378, 1536
AcsI RAATTY 5 cut(s) 322, 565, 574, 598, 748
AcuI CTGAAG 4 cut(s) 171, 1139, 1319, 2471
AdeI CACNNNGTG 1 cut(s) 59
AfaI GTAC 6 cut(s) 308, 616, 642, 1416, 1477, 2176
AfeI AGCGCT 1 cut(s) 2127
AfiI CCNNNNNNNGG 6 cut(s) 70, 325, 713, 1156, 2048, 2467
AflIII ACRYGT 2 cut(s) 1627, 2363
AjnI CCWGG 7 cut(s) 200, 519, 740, 1306, 1465, 1691, 1747
AjuI GAANNNNNNNTTGG 4 cut(s) 889, 921, 2463, 2495
AleI CACNNNNGTG 1 cut(s) 1242
Alw21I GWGCWC 2 cut(s) 292, 721
Alw26I GTCTC 2 cut(s) 82, 1278
AlwI GGATC 5 cut(s) 697, 1242, 1318, 1966, 2493
Aor13HI TCCGGA 1 cut(s) 550
Aor51HI AGCGCT 1 cut(s) 2127
AoxI GGCC 6 cut(s) 82, 378, 469, 1536, 1999, 2102
ApaI GGGCCC 1 cut(s) 473
ApeKI GCWGC 4 cut(s) 103, 115, 149, 819
ApoI RAATTY 5 cut(s) 322, 565, 574, 598, 748
ArsI GACNNNNNNTTYG 1 cut(s) 27
Asp700I GAANNNNTTC 1 cut(s) 2456
Asp718I GGTACC 1 cut(s) 640
AspLEI GCGC 1 cut(s) 2128
AspS9I GGNCC 8 cut(s) 469, 470, 726, 830, 994, 1097, 2077, 2102
AsuC2I CCSGG 1 cut(s) 352
AsuHPI GGTGA 5 cut(s) 509, 1256, 1751, 1915, 2277
AsuII TTCGAA 1 cut(s) 2084
AvaII GGWCC 5 cut(s) 726, 830, 994, 1097, 2077
BaeGI GKGCMC 1 cut(s) 473
BalI TGGCCA 3 cut(s) 84, 380, 1538
BanI GGYRCC 1 cut(s) 640
BanII GRGCYC 2 cut(s) 473, 721
BarI GAAGNNNNNNTAC 2 cut(s) 1799, 1831
BauI CACGAG 1 cut(s) 1939
BbsI GAAGAC 1 cut(s) 2316
Bbv12I GWGCWC 2 cut(s) 292, 721
BbvCI CCTCAGC 1 cut(s) 2463
BbvI GCAGC 4 cut(s) 102, 115, 136, 831
BccI CCATC 5 cut(s) 263, 367, 2050, 2390, 2403
BciT130I CCWGG 7 cut(s) 202, 521, 742, 1308, 1467, 1693, 1749
BciVI GTATCC 2 cut(s) 1582, 2453
BcnI CCSGG 1 cut(s) 352
BcoDI GTCTC 2 cut(s) 82, 1278
BfaI CTAG 4 cut(s) 737, 1047, 1490, 1511
BfmI CTRYAG 3 cut(s) 302, 650, 1820
BfoI RGCGCY 1 cut(s) 2129
BfuAI ACCTGC 1 cut(s) 1827
BfuI GTATCC 2 cut(s) 1582, 2453
BglII AGATCT 2 cut(s) 630, 805
BisI GCNGC 5 cut(s) 104, 116, 150, 253, 820
BlsI GCNGC 5 cut(s) 105, 117, 151, 254, 821
BmcAI AGTACT 1 cut(s) 1416
Bme1390I CCNGG 8 cut(s) 202, 352, 521, 742, 1308, 1467, 1693, 1749
Bme18I GGWCC 5 cut(s) 726, 830, 994, 1097, 2077
BmgT120I GGNCC 8 cut(s) 469, 470, 726, 830, 994, 1097, 2077, 2102
BmiI GGNNCC 4 cut(s) 471, 642, 728, 831
BmrFI CCNGG 8 cut(s) 202, 352, 521, 742, 1308, 1467, 1693, 1749
BmrI ACTGGG 3 cut(s) 1375, 1795, 2341
BmsI GCATC 6 cut(s) 1745, 1786, 1852, 2255, 2281, 2396
BmuI ACTGGG 3 cut(s) 1375, 1795, 2341
BpiI GAAGAC 1 cut(s) 2316
BpmI CTGGAG 3 cut(s) 528, 1207, 2087
Bpu10I CCTNAGC 1 cut(s) 2463
Bpu14I TTCGAA 1 cut(s) 2084
BpuEI CTTGAG 5 cut(s) 268, 770, 964, 985, 1189
BpuMI CCSGG 1 cut(s) 352
Bsa29I ATCGAT 1 cut(s) 260
BsaAI YACGTR 1 cut(s) 1628
BsaI GGTCTC 1 cut(s) 82
BsaJI CCNNGG 6 cut(s) 201, 1567, 1996, 2073, 2301, 2513
BsaWI WCCGGW 2 cut(s) 550, 1231
BsaXI ACNNNNNCTCC 2 cut(s) 545, 575
Bsc4I CCNNNNNNNGG 6 cut(s) 70, 325, 713, 1156, 2048, 2467
Bse118I RCCGGY 1 cut(s) 410
Bse3DI GCAATG 2 cut(s) 1401, 1782
BseAI TCCGGA 1 cut(s) 550
BseBI CCWGG 7 cut(s) 202, 521, 742, 1308, 1467, 1693, 1749
BseCI ATCGAT 1 cut(s) 260
BseDI CCNNGG 6 cut(s) 201, 1567, 1996, 2073, 2301, 2513
BseGI GGATG 4 cut(s) 1676, 1867, 2297, 2311
BseLI CCNNNNNNNGG 6 cut(s) 70, 325, 713, 1156, 2048, 2467
BseMI GCAATG 2 cut(s) 1401, 1782
BseMII CTCAG 4 cut(s) 70, 1747, 2087, 2477
BseSI GKGCMC 1 cut(s) 473
BseXI GCAGC 4 cut(s) 102, 115, 136, 831
Bsh1236I CGCG 1 cut(s) 255
BshFI GGCC 6 cut(s) 84, 380, 471, 1538, 2001, 2104
BshNI GGYRCC 1 cut(s) 640
BshVI ATCGAT 1 cut(s) 260
BsiHKAI GWGCWC 2 cut(s) 292, 721
BsiSI CCGG 5 cut(s) 352, 411, 551, 767, 1232
BslFI GGGAC 3 cut(s) 712, 843, 1992
BslI CCNNNNNNNGG 6 cut(s) 70, 325, 713, 1156, 2048, 2467
BsmAI GTCTC 2 cut(s) 82, 1278
BsmFI GGGAC 3 cut(s) 712, 843, 1992
BsmI GAATGC 3 cut(s) 1302, 1704, 2023
BsnI GGCC 6 cut(s) 84, 380, 471, 1538, 2001, 2104
Bso31I GGTCTC 1 cut(s) 82
Bsp119I TTCGAA 1 cut(s) 2084
Bsp120I GGGCCC 1 cut(s) 469
Bsp1286I GDGCHC 3 cut(s) 292, 473, 721
Bsp13I TCCGGA 1 cut(s) 550
Bsp19I CCATGG 1 cut(s) 1996
BspACI CCGC 2 cut(s) 253, 2100
BspANI GGCC 6 cut(s) 84, 380, 471, 1538, 2001, 2104
BspCNI CTCAG 4 cut(s) 69, 1746, 2088, 2476
BspDI ATCGAT 1 cut(s) 260
BspEI TCCGGA 1 cut(s) 550
BspFNI CGCG 1 cut(s) 255
BspHI TCATGA 1 cut(s) 594
BspLI GGNNCC 4 cut(s) 471, 642, 728, 831
BspMAI CTGCAG 3 cut(s) 306, 654, 1824
BspMI ACCTGC 1 cut(s) 1827
BspPI GGATC 5 cut(s) 697, 1242, 1318, 1966, 2493
BspQI GCTCTTC 1 cut(s) 726
BspT104I TTCGAA 1 cut(s) 2084
BspT107I GGYRCC 1 cut(s) 640
BspTNI GGTCTC 1 cut(s) 82
BsrBI CCGCTC 1 cut(s) 2100
BsrDI GCAATG 2 cut(s) 1401, 1782
BsrFI RCCGGY 1 cut(s) 410
BssAI RCCGGY 1 cut(s) 410
BssECI CCNNGG 6 cut(s) 201, 1567, 1996, 2073, 2301, 2513
BssSI CACGAG 1 cut(s) 1939
BssT1I CCWWGG 5 cut(s) 1567, 1996, 2073, 2301, 2513
Bst2BI CACGAG 1 cut(s) 1939
Bst2UI CCWGG 7 cut(s) 202, 521, 742, 1308, 1467, 1693, 1749
Bst4CI ACNGT 6 cut(s) 197, 527, 614, 1549, 1873, 2169
Bst6I CTCTTC 1 cut(s) 726
BstAPI GCANNNNNTGC 1 cut(s) 112
BstBAI YACGTR 1 cut(s) 1628
BstBI TTCGAA 1 cut(s) 2084
BstC8I GCNNGC 5 cut(s) 221, 412, 1444, 1773, 2102
BstDEI CTNAG 4 cut(s) 56, 1733, 2096, 2463
BstDSI CCRYGG 1 cut(s) 1996
BstEII GGTNACC 2 cut(s) 2051, 2247
BstF5I GGATG 4 cut(s) 1676, 1867, 2297, 2311
BstFNI CGCG 1 cut(s) 255
BstH2I RGCGCY 1 cut(s) 2129
BstHHI GCGC 1 cut(s) 2128
BstMAI GTCTC 2 cut(s) 82, 1278
BstMWI GCNNNNNNNGC 3 cut(s) 112, 416, 2125
BstNI CCWGG 7 cut(s) 202, 521, 742, 1308, 1467, 1693, 1749
BstNSI RCATGY 2 cut(s) 2367, 2501
BstPI GGTNACC 2 cut(s) 2051, 2247
BstSCI CCNGG 8 cut(s) 200, 350, 519, 740, 1306, 1465, 1691, 1747
BstSFI CTRYAG 3 cut(s) 302, 650, 1820
BstSLI GKGCMC 1 cut(s) 473
BstUI CGCG 1 cut(s) 255
BstV1I GCAGC 4 cut(s) 102, 115, 136, 831
BstV2I GAAGAC 1 cut(s) 2316
BstX2I RGATCY 2 cut(s) 630, 805
BstXI CCANNNNNNTGG 3 cut(s) 1016, 1195, 2171
BstYI RGATCY 2 cut(s) 630, 805
Bsu15I ATCGAT 1 cut(s) 260
BsuI GTATCC 2 cut(s) 1582, 2453
BsuRI GGCC 6 cut(s) 84, 380, 471, 1538, 2001, 2104
BsuTUI ATCGAT 1 cut(s) 260
BtgI CCRYGG 1 cut(s) 1996
BtgZI GCGATG 1 cut(s) 2368
BtsCI GGATG 4 cut(s) 1676, 1867, 2297, 2311
BtsI GCAGTG 2 cut(s) 647, 1683
BtsIMutI CAGTG 9 cut(s) 64, 292, 647, 1388, 1554, 1683, 1741, 1849, 2350
BveI ACCTGC 1 cut(s) 1827
Cac8I GCNNGC 5 cut(s) 221, 412, 1444, 1773, 2102
CciI TCATGA 1 cut(s) 594
CfoI GCGC 1 cut(s) 2128
Cfr10I RCCGGY 1 cut(s) 410
Cfr13I GGNCC 8 cut(s) 469, 470, 726, 830, 994, 1097, 2077, 2102
ClaI ATCGAT 1 cut(s) 260
CseI GACGC 2 cut(s) 155, 1671
Csp6I GTAC 6 cut(s) 307, 615, 641, 1415, 1476, 2175
CspCI CAANNNNNGTGG 8 cut(s) 148, 183, 1717, 1752, 1956, 1991, 2028, 2063
CviAII CATG 9 cut(s) 21, 595, 686, 1016, 1264, 1767, 1997, 2364, 2498
CviQI GTAC 6 cut(s) 307, 615, 641, 1415, 1476, 2175
DdeI CTNAG 4 cut(s) 56, 1733, 2096, 2463
DraIII CACNNNGTG 1 cut(s) 59
EaeI YGGCCR 3 cut(s) 82, 378, 1536
Eam1104I CTCTTC 1 cut(s) 726
EarI CTCTTC 1 cut(s) 726
Ecl136II GAGCTC 1 cut(s) 719
Eco130I CCWWGG 5 cut(s) 1567, 1996, 2073, 2301, 2513
Eco24I GRGCYC 2 cut(s) 473, 721
Eco31I GGTCTC 1 cut(s) 82
Eco47I GGWCC 5 cut(s) 726, 830, 994, 1097, 2077
Eco47III AGCGCT 1 cut(s) 2127
Eco53kI GAGCTC 1 cut(s) 719
Eco57I CTGAAG 4 cut(s) 171, 1139, 1319, 2471
Eco91I GGTNACC 2 cut(s) 2051, 2247
EcoICRI GAGCTC 1 cut(s) 719
EcoO109I RGGNCCY 2 cut(s) 470, 1097
EcoO65I GGTNACC 2 cut(s) 2051, 2247
EcoRI GAATTC 1 cut(s) 598
EcoRII CCWGG 7 cut(s) 200, 519, 740, 1306, 1465, 1691, 1747
EcoT14I CCWWGG 5 cut(s) 1567, 1996, 2073, 2301, 2513
EcoT38I GRGCYC 2 cut(s) 473, 721
ErhI CCWWGG 5 cut(s) 1567, 1996, 2073, 2301, 2513
FaeI CATG 9 cut(s) 24, 598, 689, 1019, 1267, 1770, 2000, 2367, 2501
FalI AAGNNNNNCTT 4 cut(s) 617, 649, 792, 824
FaqI GGGAC 3 cut(s) 712, 843, 1992
FatI CATG 9 cut(s) 20, 594, 685, 1015, 1263, 1766, 1996, 2363, 2497
FauI CCCGC 1 cut(s) 2093
FblI GTMKAC 1 cut(s) 539
Fnu4HI GCNGC 5 cut(s) 104, 116, 150, 253, 820
FokI GGATG 4 cut(s) 1683, 1874, 2284, 2318
FriOI GRGCYC 2 cut(s) 473, 721
Fsp4HI GCNGC 5 cut(s) 104, 116, 150, 253, 820
FspBI CTAG 4 cut(s) 737, 1047, 1490, 1511
GlaI GCGC 1 cut(s) 2127
GluI GCNGC 5 cut(s) 104, 116, 150, 253, 820
GsuI CTGGAG 3 cut(s) 528, 1207, 2087
HaeII RGCGCY 1 cut(s) 2129
HaeIII GGCC 6 cut(s) 84, 380, 471, 1538, 2001, 2104
HapII CCGG 5 cut(s) 352, 411, 551, 767, 1232
HgaI GACGC 2 cut(s) 155, 1671
HhaI GCGC 1 cut(s) 2128
Hin1II CATG 9 cut(s) 24, 598, 689, 1019, 1267, 1770, 2000, 2367, 2501
Hin6I GCGC 1 cut(s) 2126
HinP1I GCGC 1 cut(s) 2126
HincII GTYRAC 1 cut(s) 1714
HindII GTYRAC 1 cut(s) 1714
HindIII AAGCTT 1 cut(s) 494
HpaII CCGG 5 cut(s) 352, 411, 551, 767, 1232
HphI GGTGA 5 cut(s) 509, 1256, 1751, 1915, 2277
Hpy166II GTNNAC 4 cut(s) 540, 877, 1714, 2503
Hpy188I TCNGA 7 cut(s) 190, 268, 364, 432, 708, 1403, 1581
Hpy8I GTNNAC 4 cut(s) 540, 877, 1714, 2503
HpyAV CCTTC 5 cut(s) 200, 1088, 1148, 1508, 2487
HpyCH4III ACNGT 6 cut(s) 197, 527, 614, 1549, 1873, 2169
HpyCH4IV ACGT 1 cut(s) 1627
HpyF10VI GCNNNNNNNGC 3 cut(s) 112, 416, 2125
HpyF3I CTNAG 4 cut(s) 56, 1733, 2096, 2463
HpySE526I ACGT 1 cut(s) 1627
Hsp92II CATG 9 cut(s) 24, 598, 689, 1019, 1267, 1770, 2000, 2367, 2501
HspAI GCGC 1 cut(s) 2126
Kpn2I TCCGGA 1 cut(s) 550
KpnI GGTACC 1 cut(s) 644
KroI GCCGGC 1 cut(s) 410
KroNI GCCGGC 1 cut(s) 412
LguI GCTCTTC 1 cut(s) 726
LmnI GCTCC 2 cut(s) 716, 1226
Lsp1109I GCAGC 4 cut(s) 102, 115, 136, 831
LweI GCATC 6 cut(s) 1745, 1786, 1852, 2255, 2281, 2396
MaeI CTAG 4 cut(s) 737, 1047, 1490, 1511
MaeII ACGT 1 cut(s) 1627
MaeIII GTNAC 8 cut(s) 89, 1084, 1160, 1844, 1873, 2051, 2247, 2270
MbiI CCGCTC 1 cut(s) 2100
MfeI CAATTG 3 cut(s) 122, 446, 1540
MflI RGATCY 2 cut(s) 630, 805
MhlI GDGCHC 3 cut(s) 292, 473, 721
MlsI TGGCCA 3 cut(s) 84, 380, 1538
MluNI TGGCCA 3 cut(s) 84, 380, 1538
MlyI GAGTC 1 cut(s) 2078
MmeI TCCRAC 4 cut(s) 262, 920, 1170, 1701
Mox20I TGGCCA 3 cut(s) 84, 380, 1538
MroI TCCGGA 1 cut(s) 550
MroNI GCCGGC 1 cut(s) 410
MroXI GAANNNNTTC 1 cut(s) 2456
MscI TGGCCA 3 cut(s) 84, 380, 1538
MslI CAYNNNNRTG 1 cut(s) 1242
Msp20I TGGCCA 3 cut(s) 84, 380, 1538
MspA1I CMGCKG 1 cut(s) 2467
MspI CCGG 5 cut(s) 352, 411, 551, 767, 1232
MspR9I CCNGG 8 cut(s) 202, 352, 521, 742, 1308, 1467, 1693, 1749
MunI CAATTG 3 cut(s) 122, 446, 1540
Mva1269I GAATGC 3 cut(s) 1302, 1704, 2023
MvaI CCWGG 7 cut(s) 202, 521, 742, 1308, 1467, 1693, 1749
MvnI CGCG 1 cut(s) 255
MwoI GCNNNNNNNGC 3 cut(s) 112, 416, 2125
NaeI GCCGGC 1 cut(s) 412
NciI CCSGG 1 cut(s) 352
NcoI CCATGG 1 cut(s) 1996
NgoMIV GCCGGC 1 cut(s) 410
NlaIII CATG 9 cut(s) 24, 598, 689, 1019, 1267, 1770, 2000, 2367, 2501
NlaIV GGNNCC 4 cut(s) 471, 642, 728, 831
NmuCI GTSAC 3 cut(s) 89, 1160, 1844
NspI RCATGY 2 cut(s) 2367, 2501
NspV TTCGAA 1 cut(s) 2084
OliI CACNNNNGTG 1 cut(s) 1242
PagI TCATGA 1 cut(s) 594
PciI ACATGT 1 cut(s) 2363
PciSI GCTCTTC 1 cut(s) 726
PctI GAATGC 3 cut(s) 1302, 1704, 2023
PdiI GCCGGC 1 cut(s) 412
PdmI GAANNNNTTC 1 cut(s) 2456
PfeI GAWTC 9 cut(s) 257, 355, 397, 427, 770, 970, 1012, 1909, 2149
PfoI TCCNGGA 1 cut(s) 1306
PkrI GCNGC 5 cut(s) 105, 117, 151, 254, 821
PleI GAGTC 1 cut(s) 2077
PpsI GAGTC 1 cut(s) 2077
Ppu21I YACGTR 1 cut(s) 1628
PpuMI RGGWCCY 1 cut(s) 1097
PscI ACATGT 1 cut(s) 2363
Psp124BI GAGCTC 1 cut(s) 721
Psp5II RGGWCCY 1 cut(s) 1097
Psp6I CCWGG 7 cut(s) 200, 519, 740, 1306, 1465, 1691, 1747
PspEI GGTNACC 2 cut(s) 2051, 2247
PspGI CCWGG 7 cut(s) 200, 519, 740, 1306, 1465, 1691, 1747
PspN4I GGNNCC 4 cut(s) 471, 642, 728, 831
PspOMI GGGCCC 1 cut(s) 469
PspPI GGNCC 8 cut(s) 469, 470, 726, 830, 994, 1097, 2077, 2102
PspPPI RGGWCCY 1 cut(s) 1097
PstI CTGCAG 3 cut(s) 306, 654, 1824
PsuI RGATCY 2 cut(s) 630, 805
PvuII CAGCTG 1 cut(s) 2467
RsaI GTAC 6 cut(s) 308, 616, 642, 1416, 1477, 2176
RsaNI GTAC 6 cut(s) 307, 615, 641, 1415, 1476, 2175
RseI CAYNNNNRTG 1 cut(s) 1242
SacI GAGCTC 1 cut(s) 721
SapI GCTCTTC 1 cut(s) 726
SatI GCNGC 5 cut(s) 104, 116, 150, 253, 820
Sau96I GGNCC 8 cut(s) 469, 470, 726, 830, 994, 1097, 2077, 2102
ScaI AGTACT 1 cut(s) 1416
SchI GAGTC 1 cut(s) 2078
ScrFI CCNGG 8 cut(s) 202, 352, 521, 742, 1308, 1467, 1693, 1749
SduI GDGCHC 3 cut(s) 292, 473, 721
SfaNI GCATC 6 cut(s) 1745, 1786, 1852, 2255, 2281, 2396
SfcI CTRYAG 3 cut(s) 302, 650, 1820
SfuI TTCGAA 1 cut(s) 2084
SinI GGWCC 5 cut(s) 726, 830, 994, 1097, 2077
SmiMI CAYNNNNRTG 1 cut(s) 1242
SmlI CTYRAG 5 cut(s) 247, 785, 943, 964, 1204
SmoI CTYRAG 5 cut(s) 247, 785, 943, 964, 1204
SsiI CCGC 2 cut(s) 253, 2100
SspI AATATT 1 cut(s) 1173
SspMI CTAG 4 cut(s) 737, 1047, 1490, 1511
SstI GAGCTC 1 cut(s) 721
StyD4I CCNGG 8 cut(s) 200, 350, 519, 740, 1306, 1465, 1691, 1747
StyI CCWWGG 5 cut(s) 1567, 1996, 2073, 2301, 2513
TaaI ACNGT 6 cut(s) 197, 527, 614, 1549, 1873, 2169
TaiI ACGT 1 cut(s) 1630
TaqI TCGA 6 cut(s) 260, 312, 499, 660, 1805, 2084
TaqII GACCGA 1 cut(s) 714
TatI WGTACW 3 cut(s) 306, 1414, 1475
TauI GCSGC 1 cut(s) 255
TfiI GAWTC 9 cut(s) 257, 355, 397, 427, 770, 970, 1012, 1909, 2149
TscAI CASTG 9 cut(s) 64, 292, 654, 1388, 1554, 1690, 1741, 1849, 2350
TseFI GTSAC 3 cut(s) 89, 1160, 1844
TseI GCWGC 4 cut(s) 103, 115, 149, 819
Tsp45I GTSAC 3 cut(s) 89, 1160, 1844
TspDTI ATGAA 9 cut(s) 474, 611, 1004, 1068, 1130, 1363, 2130, 2238, 2322
TspGWI ACGGA 1 cut(s) 875
TspRI CASTG 9 cut(s) 64, 292, 654, 1388, 1554, 1690, 1741, 1849, 2350
VpaK11BI GGWCC 5 cut(s) 726, 830, 994, 1097, 2077
XapI RAATTY 5 cut(s) 322, 565, 574, 598, 748
XbaI TCTAGA 2 cut(s) 1489, 1510
XceI RCATGY 2 cut(s) 2367, 2501
XmiI GTMKAC 1 cut(s) 539
XmnI GAANNNNTTC 1 cut(s) 2456
XspI CTAG 4 cut(s) 737, 1047, 1490, 1511
ZrmI AGTACT 1 cut(s) 1416
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.