Rh3CG121200

Receptor-like protein 12

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
Physical Location & Seq
Reverse (-)
9802950 .. 9807595
4646 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG121200.1

Sequence Viewer

Length: 3387 bp
ATGAGAATTCCATTGCTTCCATGGTTTTTCTTGATACCCTTTTGCTGTTGTGCACTGTTCCATACAATTGTGGTGTCTGGCCAATGTGACAGCAACGAGCAGCAATCTTTGCTGCTCCAATTGAAGAACAGCCTCAATTTTAACACTACATTCTCCACAAAACTTGTGAAGTGGAATAATGCTTCGGATTACTGTCTTTGGGAAGGTGTTTCCTGCAACCAGCGTTGTGTTACCCATCTTGACTTGAGCAACGAATCGATTTCGAGTGGACTTGATGATTCAAGTGCTCTTTTCAGTCTGCAATACATCGAGAACCTGACTTTGGCTTTTAATGACTTCAAACAAAGCCTGATTCCATCGGAGATCAACAAGTTGGCCAGTTTGAGTTATTTGAATCTATCAAATGCTGGCTTTGCAGGGCAGATTCCGATTGAGATTTCGCACTTGAGAAGGTTGGTGTTTCTTGATTTATCTACTATTTATTTTCCTGGAATTCCTGCACTGCAACTTGAGCATCCAAATTTGAATTTGCTCATTGGAAACCTTTCGGAGATAGTTGAACTTCATCTTGATGGTGTGAACATATCAGCACAGAGAGCTCAGTGGTGTCAAGCATTATCATCTTCATTGCCAAAGTTGAGGGTGTTGAGCCTGTCCAGTTGTAATCTTTTGGGCCCTATTGATGTTTCATTGTTGAAGCTTCAATCACTCTCAGAAATTCGTATAGAGAGTAACAATTTGTCTACTCCAGTTCCAGAGTTCTTGTCAAATTTCACAAATTTGACTTCCTTACGCCTCATGAATTCAGGGTTACTTGGTACATTCCCAGAGAAGATCTTTCGGGTACCTACACTGCAGATTATCGACTTAATTGGCAATCAAGAGCTACAAGGTTCGCTGCCAGACTTTCCGAAGAATGGAGCTCTTCAGTTCCTGTTCCTAGCCAGGACAAATTTTTCAGGGTTATTGCCGGAATCTATTGGAAACCTCAAGATGTTGTCCAAAGTAGATCTTTCAAATTGCAACTTCACGGGACCAATCCCAAAGTCAATGGAAAGCCTTACGGAACTGGTTTATGTGGACATGTCAGCAAACAAGCTTAATGGTTCAGTTCCATTGTTGAGTATGGCCAAGAATCTGACCAACATAAATCTTTCGTACAATGAGCTAACAGGTCAGATTAACTCTATTCGCTGGGAAAACCTGATCAATCTGGACTTGCGTTTCAATCAACTGAATGGAAGTATTCCAGTGTCCCTGTTTTCCCTTCCCTTGTTGCAGAAACTACTACTCTCCAACAATCAATTCTCTGGTAAGTTGCATGAATTTGCCAATATCTCTTCACTGGACACCGTCGATTTGAGTAGCAACAATTTGGAAGGAACGGTACCCATGTCTATCTTTAATCTCCGAGGGCTTAAAATTCTCTCACTTTCTTCCAACAACTTCAGTGGCTCCTTCCCTCTTAACAGTGTGCAACAACTCAAAAATCTTTCCAGTCTTGATCTTTCATACAATAGTTTGTCAATTAGTTACAATAGTACAAATTCCTCAGAGTCATCCTTTCCTAATATTACCACATTAAAATTGGCTTCTGGAGAGTTGAGAACATTTCCTAATTTCTTGAGAGATCAATCCAGATTACGCTATTTGGACCTTTCACAGAACCAGATTCATGGAGAGATACCCAACTGGATTTGGAAGCTCAATAATCTATTACAACTAAATCTGTCTTTCAACTCCCTTGTAACTCTAGAAGGTCCTTTAACCAATCTTGCTTCTAGTTTGTCTGTGCTTGACCTTCATTCTAACCAGCTTCAGGGACAAGTCCCAATTTTTCCACCATTTGCCACTTATCTGGATTACTCGAGAAACAGTTTCACCTCTAGCATACCGGCTGACATTGGTGATTTCTTTACTTACACTCTTTTCTTGTCTCTTTCAAGCAACAAATTTCAAGGGAGCATTCCAGGATCAATATGCAATGCGTCATATCTTCAGGTTCTTGATCTGTCCAATAATTCTTTAACTGGCATCATTCCCCCATGCTTGACTGCAACAGGCGGAACTCTTGTGGTACTCAATTTAAGGAGAAATAAACTTGCTGGCAGAATTCCTGATAGATTTCCTGGCCATTGTACTTTGAAAACTCTAGACTTCAGTGGAAATCTTCTAGAAGGTCAGTTTCCAAAATCTCTAGCCAATTGCAGAGTGTTAGAAGTTTTGAACCTTGGAAACAATGAGATAAGGGATACATTTCCGTGCTTGTTGAAGAACATATCCACCTTGCGTGTCCTTGTTTTGCGATCAAACCAATTTTTTGGACGCTTGGGATGTTCCAACACCACTGGTACCTGGCCAATGCTTCAAATTGTTGACATAGCACACAACAACTTTAGTGGTGAAATACCGGGAAAATGCTTGACGACATGGCAGGCAATGATGGGCAATGAAGATGCCCAATCATCAATCGATCATCTACAATTTCCTGTCTTTAGATTCAGTGACGGGCTAAATTATCAGGATGCTATAACAGTTACCACCAAAGGACTAGAGTTGGAATTTGTCAAGATTTTAACCGTCTTCACCTCTATTGACATCTCGTGCAACAATTTCAATGGATCAATACCGGCAGAAGTGGGACAACTGAAAGCACTCTATGGCCTCAACATGTCCAATAATGCTCTCACAGGCACTATCCCATCATCATTGGGTAACCTAACACAAATTGAGTCCTTGGACTTTTCGAGCAACAGCCTGAGCGGGCCAATTCCACCACAGCTTACACAGCTCACTTTCCTGTCATTCTTGAATCTCTCAGATAACCAACTGGTTGGGATGATACCGATTGGTACTCAGTTTCAAACATTTTCTTCAGATTCCTTTGAAGATAATGAAGGATTATGTGGAACACCTTTATCTGTAAAATGCAGTAATTCCAGCCCCTCACCAGATGCACCATCCAATGAAAAAGAGTCAGGTGGGTTTGATTGGCAGTCCATATATACTGGACTGGGGTTTGGAGTGGGAGCAGGAGTGGTTGTTATTCTCTTAATGTTGTGGGAGGAAGGAAGAAATTGGATGGACTACAGCATTGATAAAATTCTTCTGGTACTTCTTCCAATGATGGGATTCTCTTACAAAACTCGTCACGAATGGGATGATGATGGGGAGGAAGATTATGAACAAGATAGCATGTATTTCACAGGAGACTATGATCAAGATGAGATTGAATCAGAAGACAAAGGAATTCAGGGTCCATTTTGTGTGTTCTGTTCAAAATTTGATATCAGTAGGAAGAGTCCCATCCATAACCCAAATTGTACATGCCATTTGTCACCACCTATGTCATCTACTTCTTCCTCCTCGTCCTCTTTCTCTTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1128

Amino Acids

124.44

Weight (kDa)

4.92

Isoelectric Point (pI)

41.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 32 - 73 5.7e-07 Leucine rich repeat N-terminal domain
LRR_8 PF13855 448 - 508 6.7e-07 Leucine rich repeat
LRR_8 PF13855 523 - 582 1e-05 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 3 cut(s) 844, 1387, 2351
AccB1I GGYRCC 3 cut(s) 844, 1387, 2351
AccBSI CCGCTC 1 cut(s) 2763
AccI GTMKAC 1 cut(s) 743
AciI CCGC 2 cut(s) 2064, 2763
AclWI GGATC 2 cut(s) 1981, 2629
AcoI YGGCCR 5 cut(s) 79, 375, 1128, 2131, 2357
AcuI CTGAAG 6 cut(s) 911, 1432, 1802, 1982, 2143, 2859
AfiI CCNNNNNNNGG 4 cut(s) 322, 917, 1819, 3128
AflIII ACRYGT 2 cut(s) 1083, 2670
AjnI CCWGG 5 cut(s) 487, 944, 1969, 2128, 2354
AjuI GAANNNNNNNTTGG 4 cut(s) 305, 337, 1289, 1321
Alw21I GWGCWC 4 cut(s) 55, 289, 601, 925
Alw26I GTCTC 2 cut(s) 1941, 3204
Alw44I GTGCAC 1 cut(s) 51
AlwI GGATC 2 cut(s) 1981, 2629
AlwNI CAGNNNCTG 1 cut(s) 934
Ama87I CYCGRG 1 cut(s) 1867
AoxI GGCC 8 cut(s) 79, 375, 673, 1128, 2131, 2357, 2662, 2765
ApaI GGGCCC 1 cut(s) 677
ApaLI GTGCAC 1 cut(s) 51
ApeKI GCWGC 3 cut(s) 100, 112, 898
Asp700I GAANNNNTTC 1 cut(s) 544
Asp718I GGTACC 3 cut(s) 844, 1387, 2351
AspS9I GGNCC 7 cut(s) 673, 674, 1034, 1654, 1760, 2765, 3257
AsuC2I CCSGG 1 cut(s) 2412
AsuHPI GGTGA 6 cut(s) 1873, 1919, 2414, 2578, 2940, 3330
AvaI CYCGRG 1 cut(s) 1867
AvaII GGWCC 4 cut(s) 1034, 1654, 1760, 3257
BaeGI GKGCMC 2 cut(s) 55, 677
BaeI ACNNNNGTAYC 2 cut(s) 1379, 1412
BalI TGGCCA 5 cut(s) 81, 377, 1130, 2133, 2359
BanI GGYRCC 3 cut(s) 844, 1387, 2351
BanII GRGCYC 3 cut(s) 601, 677, 925
BarI GAAGNNNNNNTAC 2 cut(s) 1371, 1403
BauI CACGAG 1 cut(s) 2602
BbsI GAAGAC 2 cut(s) 2575, 3246
Bbv12I GWGCWC 4 cut(s) 55, 289, 601, 925
BbvI GCAGC 3 cut(s) 99, 112, 885
BciT130I CCWGG 5 cut(s) 489, 946, 1971, 2130, 2356
BciVI GTATCC 1 cut(s) 2245
BclI TGATCA 2 cut(s) 1206, 3217
BcnI CCSGG 1 cut(s) 2412
BcoDI GTCTC 2 cut(s) 1941, 3204
BfaI CTAG 8 cut(s) 941, 1754, 1782, 1887, 2153, 2174, 2198, 2552
BfmI CTRYAG 2 cut(s) 854, 3088
BfuI GTATCC 1 cut(s) 2245
BglII AGATCT 2 cut(s) 834, 1009
BisI GCNGC 3 cut(s) 101, 113, 899
BlsI GCNGC 3 cut(s) 102, 114, 900
Bme1390I CCNGG 6 cut(s) 489, 946, 1971, 2130, 2356, 2412
Bme18I GGWCC 4 cut(s) 1034, 1654, 1760, 3257
BmeT110I CYCGRG 1 cut(s) 1867
BmgT120I GGNCC 7 cut(s) 673, 674, 1034, 1654, 1760, 2765, 3257
BmiI GGNNCC 7 cut(s) 675, 846, 1035, 1389, 1456, 2353, 3258
BmrFI CCNGG 6 cut(s) 489, 946, 1971, 2130, 2356, 2412
BmrI ACTGGG 1 cut(s) 3023
BmsI GCATC 5 cut(s) 523, 2043, 2446, 2515, 2944
BmuI ACTGGG 1 cut(s) 3023
BpiI GAAGAC 2 cut(s) 2575, 3246
BpmI CTGGAG 2 cut(s) 732, 1617
Bpu10I CCTNAGC 1 cut(s) 2759
BpuEI CTTGAG 5 cut(s) 265, 466, 530, 974, 1645
BpuMI CCSGG 1 cut(s) 2412
Bsa29I ATCGAT 2 cut(s) 257, 2472
BsaJI CCNNGG 4 cut(s) 20, 1411, 2230, 2736
BsaXI ACNNNNNCTCC 4 cut(s) 3021, 3027, 3051, 3057
Bsc4I CCNNNNNNNGG 4 cut(s) 322, 917, 1819, 3128
Bse118I RCCGGY 2 cut(s) 1894, 2629
Bse3DI GCAATG 5 cut(s) 11, 626, 1990, 2445, 2455
BseBI CCWGG 5 cut(s) 489, 946, 1971, 2130, 2356
BseCI ATCGAT 2 cut(s) 257, 2472
BseDI CCNNGG 4 cut(s) 20, 1411, 2230, 2736
BseGI GGATG 9 cut(s) 514, 1559, 2339, 2530, 2844, 2960, 3087, 3166, 3306
BseLI CCNNNNNNNGG 4 cut(s) 322, 917, 1819, 3128
BseMI GCAATG 5 cut(s) 11, 626, 1990, 2445, 2455
BseMII CTCAG 6 cut(s) 614, 726, 1566, 2750, 2832, 2870
BseRI GAGGAG 1 cut(s) 3355
BseSI GKGCMC 2 cut(s) 55, 677
BseXI GCAGC 3 cut(s) 99, 112, 885
BseYI CCCAGC 1 cut(s) 1194
BsgI GTGCAG 1 cut(s) 483
BshFI GGCC 8 cut(s) 81, 377, 675, 1130, 2133, 2359, 2664, 2767
BshNI GGYRCC 3 cut(s) 844, 1387, 2351
BshVI ATCGAT 2 cut(s) 257, 2472
BsiHKAI GWGCWC 4 cut(s) 55, 289, 601, 925
BsiHKCI CYCGRG 1 cut(s) 1867
BsiSI CCGG 4 cut(s) 971, 1895, 2411, 2630
BslFI GGGAC 6 cut(s) 1047, 1240, 1814, 1836, 2655, 3288
BslI CCNNNNNNNGG 4 cut(s) 322, 917, 1819, 3128
BsmAI GTCTC 2 cut(s) 1941, 3204
BsmFI GGGAC 6 cut(s) 1047, 1240, 1814, 1836, 2655, 3288
BsmI GAATGC 1 cut(s) 1965
BsnI GGCC 8 cut(s) 81, 377, 675, 1130, 2133, 2359, 2664, 2767
BsoBI CYCGRG 1 cut(s) 1867
Bsp120I GGGCCC 1 cut(s) 673
Bsp1286I GDGCHC 5 cut(s) 55, 289, 601, 677, 925
Bsp1407I TGTACA 1 cut(s) 3323
Bsp19I CCATGG 1 cut(s) 20
BspACI CCGC 2 cut(s) 2064, 2763
BspANI GGCC 8 cut(s) 81, 377, 675, 1130, 2133, 2359, 2664, 2767
BspCNI CTCAG 6 cut(s) 613, 725, 1565, 2751, 2831, 2869
BspDI ATCGAT 2 cut(s) 257, 2472
BspHI TCATGA 1 cut(s) 798
BspLI GGNNCC 7 cut(s) 675, 846, 1035, 1389, 1456, 2353, 3258
BspMAI CTGCAG 1 cut(s) 858
BspPI GGATC 2 cut(s) 1981, 2629
BspQI GCTCTTC 1 cut(s) 930
BspT107I GGYRCC 3 cut(s) 844, 1387, 2351
BsrBI CCGCTC 1 cut(s) 2763
BsrDI GCAATG 5 cut(s) 11, 626, 1990, 2445, 2455
BsrFI RCCGGY 2 cut(s) 1894, 2629
BsrGI TGTACA 1 cut(s) 3323
BssAI RCCGGY 2 cut(s) 1894, 2629
BssECI CCNNGG 4 cut(s) 20, 1411, 2230, 2736
BssSI CACGAG 1 cut(s) 2602
BssT1I CCWWGG 3 cut(s) 20, 2230, 2736
Bst2BI CACGAG 1 cut(s) 2602
Bst2UI CCWGG 5 cut(s) 489, 946, 1971, 2130, 2356
Bst4CI ACNGT 8 cut(s) 57, 194, 1354, 1387, 1472, 1877, 2536, 2581
Bst6I CTCTTC 3 cut(s) 930, 1345, 3293
BstAPI GCANNNNNTGC 1 cut(s) 109
BstAUI TGTACA 1 cut(s) 3323
BstC8I GCNNGC 4 cut(s) 409, 2107, 2436, 2765
BstDEI CTNAG 6 cut(s) 600, 712, 1552, 2759, 2818, 2856
BstDSI CCRYGG 1 cut(s) 20
BstEII GGTNACC 1 cut(s) 2714
BstF5I GGATG 9 cut(s) 514, 1559, 2339, 2530, 2844, 2960, 3087, 3166, 3306
BstMAI GTCTC 2 cut(s) 1941, 3204
BstMWI GCNNNNNNNGC 5 cut(s) 109, 413, 511, 596, 2788
BstNI CCWGG 5 cut(s) 489, 946, 1971, 2130, 2356
BstNSI RCATGY 4 cut(s) 1087, 2674, 3199, 3330
BstPI GGTNACC 1 cut(s) 2714
BstSCI CCNGG 6 cut(s) 487, 944, 1969, 2128, 2354, 2410
BstSFI CTRYAG 2 cut(s) 854, 3088
BstSLI GKGCMC 2 cut(s) 55, 677
BstV1I GCAGC 3 cut(s) 99, 112, 885
BstV2I GAAGAC 2 cut(s) 2575, 3246
BstX2I RGATCY 2 cut(s) 834, 1009
BstXI CCANNNNNNTGG 4 cut(s) 1676, 1858, 2321, 2834
BstYI RGATCY 2 cut(s) 834, 1009
Bsu15I ATCGAT 2 cut(s) 257, 2472
BsuI GTATCC 1 cut(s) 2245
BsuRI GGCC 8 cut(s) 81, 377, 675, 1130, 2133, 2359, 2664, 2767
BsuTUI ATCGAT 2 cut(s) 257, 2472
BtgI CCRYGG 1 cut(s) 20
BtsCI GGATG 9 cut(s) 514, 1559, 2339, 2530, 2844, 2960, 3087, 3166, 3306
BtsI GCAGTG 2 cut(s) 500, 851
Cac8I GCNNGC 4 cut(s) 409, 2107, 2436, 2765
CaiI CAGNNNCTG 1 cut(s) 934
CciI TCATGA 1 cut(s) 798
Cfr10I RCCGGY 2 cut(s) 1894, 2629
Cfr13I GGNCC 7 cut(s) 673, 674, 1034, 1654, 1760, 2765, 3257
ClaI ATCGAT 2 cut(s) 257, 2472
CseI GACGC 2 cut(s) 1977, 2334
CspCI CAANNNNNGTGG 6 cut(s) 145, 180, 1432, 1467, 2380, 2415
DdeI CTNAG 6 cut(s) 600, 712, 1552, 2759, 2818, 2856
EaeI YGGCCR 5 cut(s) 79, 375, 1128, 2131, 2357
Eam1104I CTCTTC 3 cut(s) 930, 1345, 3293
EarI CTCTTC 3 cut(s) 930, 1345, 3293
EciI GGCGGA 1 cut(s) 2079
Ecl136II GAGCTC 2 cut(s) 599, 923
Eco130I CCWWGG 3 cut(s) 20, 2230, 2736
Eco24I GRGCYC 3 cut(s) 601, 677, 925
Eco32I GATATC 1 cut(s) 3289
Eco47I GGWCC 4 cut(s) 1034, 1654, 1760, 3257
Eco53kI GAGCTC 2 cut(s) 599, 923
Eco57I CTGAAG 6 cut(s) 911, 1432, 1802, 1982, 2143, 2859
Eco88I CYCGRG 1 cut(s) 1867
Eco91I GGTNACC 1 cut(s) 2714
EcoICRI GAGCTC 2 cut(s) 599, 923
EcoO109I RGGNCCY 2 cut(s) 674, 1760
EcoO65I GGTNACC 1 cut(s) 2714
EcoRI GAATTC 5 cut(s) 6, 492, 802, 2112, 3249
EcoRII CCWGG 5 cut(s) 487, 944, 1969, 2128, 2354
EcoRV GATATC 1 cut(s) 3289
EcoT14I CCWWGG 3 cut(s) 20, 2230, 2736
EcoT38I GRGCYC 3 cut(s) 601, 677, 925
ErhI CCWWGG 3 cut(s) 20, 2230, 2736
FalI AAGNNNNNCTT 2 cut(s) 996, 1028
FaqI GGGAC 6 cut(s) 1047, 1240, 1814, 1836, 2655, 3288
FauI CCCGC 1 cut(s) 2756
FbaI TGATCA 2 cut(s) 1206, 3217
FblI GTMKAC 1 cut(s) 743
Fnu4HI GCNGC 3 cut(s) 101, 113, 899
FokI GGATG 9 cut(s) 501, 1546, 2346, 2537, 2851, 2947, 3094, 3173, 3293
FriOI GRGCYC 3 cut(s) 601, 677, 925
Fsp4HI GCNGC 3 cut(s) 101, 113, 899
FspBI CTAG 8 cut(s) 941, 1754, 1782, 1887, 2153, 2174, 2198, 2552
GluI GCNGC 3 cut(s) 101, 113, 899
GsaI CCCAGC 1 cut(s) 1198
GsuI CTGGAG 2 cut(s) 732, 1617
HaeIII GGCC 8 cut(s) 81, 377, 675, 1130, 2133, 2359, 2664, 2767
HapII CCGG 4 cut(s) 971, 1895, 2411, 2630
HgaI GACGC 2 cut(s) 1977, 2334
HincII GTYRAC 1 cut(s) 2377
HindII GTYRAC 1 cut(s) 2377
HindIII AAGCTT 2 cut(s) 698, 1097
HpaII CCGG 4 cut(s) 971, 1895, 2411, 2630
HphI GGTGA 6 cut(s) 1873, 1919, 2414, 2578, 2940, 3330
Hpy166II GTNNAC 6 cut(s) 53, 269, 580, 744, 1081, 2377
Hpy8I GTNNAC 6 cut(s) 53, 269, 580, 744, 1081, 2377
Hpy99I CGWCG 1 cut(s) 1358
HpyCH4III ACNGT 8 cut(s) 57, 194, 1354, 1387, 1472, 1877, 2536, 2581
HpyF10VI GCNNNNNNNGC 5 cut(s) 109, 413, 511, 596, 2788
HpyF3I CTNAG 6 cut(s) 600, 712, 1552, 2759, 2818, 2856
KpnI GGTACC 3 cut(s) 848, 1391, 2355
Ksp22I TGATCA 2 cut(s) 1206, 3217
LguI GCTCTTC 1 cut(s) 930
LmnI GCTCC 5 cut(s) 120, 920, 1460, 1962, 3029
Lsp1109I GCAGC 3 cut(s) 99, 112, 885
LweI GCATC 5 cut(s) 523, 2043, 2446, 2515, 2944
MaeI CTAG 8 cut(s) 941, 1754, 1782, 1887, 2153, 2174, 2198, 2552
MbiI CCGCTC 1 cut(s) 2763
MfeI CAATTG 3 cut(s) 66, 119, 2203
MflI RGATCY 2 cut(s) 834, 1009
MhlI GDGCHC 5 cut(s) 55, 289, 601, 677, 925
MlsI TGGCCA 5 cut(s) 81, 377, 1130, 2133, 2359
MluNI TGGCCA 5 cut(s) 81, 377, 1130, 2133, 2359
MlyI GAGTC 4 cut(s) 1565, 2741, 2984, 3310
MmeI TCCRAC 4 cut(s) 1320, 1464, 2364, 2538
Mox20I TGGCCA 5 cut(s) 81, 377, 1130, 2133, 2359
MroXI GAANNNNTTC 1 cut(s) 544
MscI TGGCCA 5 cut(s) 81, 377, 1130, 2133, 2359
MslI CAYNNNNRTG 2 cut(s) 570, 2260
Msp20I TGGCCA 5 cut(s) 81, 377, 1130, 2133, 2359
MspI CCGG 4 cut(s) 971, 1895, 2411, 2630
MspR9I CCNGG 6 cut(s) 489, 946, 1971, 2130, 2356, 2412
MunI CAATTG 3 cut(s) 66, 119, 2203
Mva1269I GAATGC 1 cut(s) 1965
MvaI CCWGG 5 cut(s) 489, 946, 1971, 2130, 2356
MwoI GCNNNNNNNGC 5 cut(s) 109, 413, 511, 596, 2788
NciI CCSGG 1 cut(s) 2412
NcoI CCATGG 1 cut(s) 20
NlaIV GGNNCC 7 cut(s) 675, 846, 1035, 1389, 1456, 2353, 3258
NmuCI GTSAC 4 cut(s) 86, 2504, 3149, 3336
NspI RCATGY 4 cut(s) 1087, 2674, 3199, 3330
PaeR7I CTCGAG 1 cut(s) 1867
PagI TCATGA 1 cut(s) 798
PciI ACATGT 2 cut(s) 1083, 2670
PciSI GCTCTTC 1 cut(s) 930
PctI GAATGC 1 cut(s) 1965
PdmI GAANNNNTTC 1 cut(s) 544
PflFI GACNNNGTC 1 cut(s) 1352
PfoI TCCNGGA 2 cut(s) 487, 1969
PkrI GCNGC 3 cut(s) 102, 114, 900
PleI GAGTC 4 cut(s) 1564, 2740, 2983, 3309
PpsI GAGTC 4 cut(s) 1564, 2740, 2983, 3309
PpuMI RGGWCCY 1 cut(s) 1760
PscI ACATGT 2 cut(s) 1083, 2670
Psp124BI GAGCTC 2 cut(s) 601, 925
Psp5II RGGWCCY 1 cut(s) 1760
Psp6I CCWGG 5 cut(s) 487, 944, 1969, 2128, 2354
PspEI GGTNACC 1 cut(s) 2714
PspFI CCCAGC 1 cut(s) 1194
PspGI CCWGG 5 cut(s) 487, 944, 1969, 2128, 2354
PspN4I GGNNCC 7 cut(s) 675, 846, 1035, 1389, 1456, 2353, 3258
PspOMI GGGCCC 1 cut(s) 673
PspPI GGNCC 7 cut(s) 673, 674, 1034, 1654, 1760, 2765, 3257
PspPPI RGGWCCY 1 cut(s) 1760
PstI CTGCAG 1 cut(s) 858
PstNI CAGNNNCTG 1 cut(s) 934
PsuI RGATCY 2 cut(s) 834, 1009
PsyI GACNNNGTC 1 cut(s) 1352
RseI CAYNNNNRTG 2 cut(s) 570, 2260
SacI GAGCTC 2 cut(s) 601, 925
SapI GCTCTTC 1 cut(s) 930
SatI GCNGC 3 cut(s) 101, 113, 899
Sau96I GGNCC 7 cut(s) 673, 674, 1034, 1654, 1760, 2765, 3257
SchI GAGTC 4 cut(s) 1565, 2741, 2984, 3310
ScrFI CCNGG 6 cut(s) 489, 946, 1971, 2130, 2356, 2412
SduI GDGCHC 5 cut(s) 55, 289, 601, 677, 925
SfaNI GCATC 5 cut(s) 523, 2043, 2446, 2515, 2944
SfcI CTRYAG 2 cut(s) 854, 3088
Sfr274I CTCGAG 1 cut(s) 1867
SinI GGWCC 4 cut(s) 1034, 1654, 1760, 3257
SlaI CTCGAG 1 cut(s) 1867
SmiMI CAYNNNNRTG 2 cut(s) 570, 2260
SmlI CTYRAG 6 cut(s) 244, 445, 509, 989, 1624, 1867
SmoI CTYRAG 6 cut(s) 244, 445, 509, 989, 1624, 1867
SsiI CCGC 2 cut(s) 2064, 2763
SspI AATATT 1 cut(s) 1573
SspMI CTAG 8 cut(s) 941, 1754, 1782, 1887, 2153, 2174, 2198, 2552
SstI GAGCTC 2 cut(s) 601, 925
StyD4I CCNGG 6 cut(s) 487, 944, 1969, 2128, 2354, 2410
StyI CCWWGG 3 cut(s) 20, 2230, 2736
TaaI ACNGT 8 cut(s) 57, 194, 1354, 1387, 1472, 1877, 2536, 2581
TaqI TCGA 8 cut(s) 257, 263, 309, 864, 1356, 1868, 2472, 2747
TatI WGTACW 3 cut(s) 1541, 2138, 3323
TseFI GTSAC 4 cut(s) 86, 2504, 3149, 3336
TseI GCWGC 3 cut(s) 100, 112, 898
Tsp45I GTSAC 4 cut(s) 86, 2504, 3149, 3336
TspGWI ACGGA 2 cut(s) 1079, 2250
Tth111I GACNNNGTC 1 cut(s) 1352
VneI GTGCAC 1 cut(s) 51
VpaK11BI GGWCC 4 cut(s) 1034, 1654, 1760, 3257
XbaI TCTAGA 3 cut(s) 1753, 2152, 2173
XceI RCATGY 4 cut(s) 1087, 2674, 3199, 3330
XcmI CCANNNNNNNNNTGG 2 cut(s) 18, 1585
XhoI CTCGAG 1 cut(s) 1867
XmiI GTMKAC 1 cut(s) 743
XmnI GAANNNNTTC 1 cut(s) 544
XspI CTAG 8 cut(s) 941, 1754, 1782, 1887, 2153, 2174, 2198, 2552
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.