FvH4_6g11080

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000047
Physical Location & Seq
Reverse (-)
6621987 .. 6625391
3405 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g11080.t1

Sequence Viewer

Length: 3405 bp
ATGAGAATTCCATTGCTTCCATGGTTTTTCTTGATACCCTTTTGCTATTTTCTACTGATCCATATAGCTGTGGTCTCTGGCCAGTGTGCCAGCAACCAGCAATCATCTTTGCTTCTCCAGTTGAAGAACAGCCTCAATTTTACCTCTGCATTATCCACAAAACTTGTGAAGTGGAAAAATGCTTCAGATTACTGTTCTTGGGAAGGTGTGTCCTGCAAGCAGGGTTGTGTTACCCAACTTGACTTGAGCAACGAATCGATTTCAGGTGGACTTGATAATTCAAGTGCTCTTTTCAGTCTGCAATACATTGAGAACCTGACTTTGGCTTTCAACAACTTCAATTATACCCAGATTCCATCGGAGTTCAACAAGTTGGCCAGTTTGAGTCATTTGAATCTGTCGAATGCTGGCTTTGCCGAGCAGATTCCGATTGAGATTTCGCACTTGACAAGGTTGGTATTTCTTGATTTATCTACCATTTCCTTTCCTGGAGTTCCTGCACTTCAACTTGAGCATCCAAATTTGAATCAGCTCATAGGAAACCTTTCGGAGATAGTTGAACTTCATCTTGATGGTGTGAACATATCAGCACCGGGAGCTCAGTGGTGTCGAGCAATATCATCTTCATTGCCAAAGTTGAGGGTGTTGAGCTTGTCCAGCTGCAATCTTTTGGGACCTATTGATGATTCATTGTTGAAGCTTCGATCACTCTCAGAAATTCGTATAGATAGCAACAATCTGTCTACTCAAGTTCCAAAGTTCTTGTCAAATTTCCCAAATTTGACTTCCTTACACATCATGAATTCAAGGTTACAAGGTACATTCCCAAAGGAGATCTTTCAGGTACATACACTGCAGATTATCGACTTAATCGGCAATCAAGACCTACATGGATCGTTACCAGACTTTCCTGAAAATGGAGCTCTTCGGTCCCTGTTCCTAGCCAGGACACAATTTTCAGGGTCATTGCCTAAATCTATTGGAAACCTCAAGATGTTGTCCAGAGTGGATCTTTCATATTGCAATTTCACTGGACAAATACCAAAGTCATTGGCAAGCCTTACAGAACTGGTTTATGTGGACATGACAGGGAACAAGTTCAATGGTTCAGTTCCAGTGTTGAGTATGGCCAAGAATCTGACCGACATAAATCTTTCTTACAATGAGCTAACAGGTCAGATTAATTCTACTCACTGGCAAAATCTTACGAGTCTTTTGAATCTCAACTTGGGTGATAATAAGCTCAGTGGCAGTATTCCATCGTCTCTATTTTATCTTCCCTTGTTGCAGAAACTACAGCTTTCCAACAATCAGTTCTCTGGTCAGTTACATGACTTTGCCAATATCTCGAGACTGGACACCCTTGATTTGAGTAGCAACAATTTGGAAGGAACCATACCCAAGTCTATCTTTAATCTCCAAGGGCTTAAAATTCTTTCACTTTTCTCCAACAACTTCAGCGGCTCCTTCCCTCTTAACAGTATTCAACAGCTCAAAAATCTTTCCAGCCTTGATCTTTCATTCAACAGTTTGTCAATTAGTTACTATAGTACCAACTCCTCACAGTCCTCCTTTCCTAATATTACCACACTGAAGTTGGCTTCTGGGAAGTTGAGAAAATTTCCTGATTTCTTGAGGAATCAATCCAAATTGACCTATTTGGACCTTTCACAGAACCAAATCGATGGAGAGATACCCAACTGGATTTGGAGTCTCAGTAATCTTCTTCAACTAAATCTGTCTTGCAACTCCCTGGTAACTCTAGAAGGTCCTTCCATCAACCTCACTTCTACTTTGTCTATGCTTGACCTTCATTCCAACCAGCTTCAGGGTGACATTTCGATACTTCCACCACATGCCACTTATCTGGATTACTCGAGAAATAATTTCAGTTCTAGCATACCGGATGACATTGGTGATTTCCTTAACTACACCATGTTCTTGTCTCTTTCCAGCAACAACTTAAACGGTAGCATTCCAGTATCAATGTGCAATGGTGCATATCTTCAGGTTCTTGATCTGTCCAATAATTCTTTGAGTGGCTCCATTCCCCAGTGCTTGACTGCAACCGGAACTCTTGTTGTACTCAATTTGAGGAGAAACAAACTTGTTGGCACTATTCCTGATACATTTTCTGGCCGTTGTACTTTGAAAACTCTAGATTTCAATGGAAATCATCTAGAAGGTAAGTTTCCAAAATCTCTAGCCAATTGCACAGTGTTAGAAGTTTTGAACCTTGGAAACAATCAGATAATGGGTACATTCCCTTGCTTGTTGAAGAACATATCCACCTTGCGTGTACTTGTTTTGCGGTCAAACGGATTTTATGGACGCCTTGGATGTTCTAAAAGCAACGGTACCTGGCCCATGCTTCAGATTGTTGACATAGCGCACAACAACTTTAGTGGTGAAATACCAGGAAGATGCTTGACTACATGGCAGGCAATGACAGGCAACGAAGATGATGCCCAGTCAAAGATCAATCACCTGCAATTTGGAGTTCTACCATTCAGTGACTTAAATTATGAGGATGCTATAGCAGTTACCACCAAAGGAGTAGAAATGGAGTTGGTCAAGATTCTAACTGTTTTCACCTCTATTGACATCTCGTGCAACAATTTCAATGGACCAATACCGGCGCAAGTGGGACAACTAAAAGCACTCTATGCCCTCAACTTGTCCAACAATGCTCTCACAGGCCCTATCCCTCCATCATTGAGTAATCTAACACAACTTGAGTCCTTGGACCTTTCGAACAACAACCTGAGCGGGACAATTCCACCAGAGCTTACAGTGCTCACTTTCCTTTCATTCTTGAATCTCTCAGATAATCAACTGTCTGGGACGATACCGAATGGTAACCAGTTTTCGACATTTGGTTCATCTTCCTATGAAGATAATGAAGGATTATGTGGCGCACCTTTACTTGTAAAATGCAGTAATTCCAGCGAGTCACCAGATGCACCATCCAAGGTCGAAAACAAAGAGTCAGTAATTGGGTTGGATTGGCCATCCATATACACTGGATTGGGGTTCGGAGTGGGAGCAGGAGTGGTTGTTATTCTGTTAATGTTGTGGGAGGAAGGAAGAAATTGGATGGACGACAGCATTGATAGAATTCTTCTAGTAATCCTTCCAATGATGGGATACTCTTACAGAACTCGTCAAGAATGGGACGATGATGATGAGGAAGAAGATTATGGAGAAGAAATCATGTTTTTCGTAGAAAGCTATGATCAAGATGAGATTGAATCAGAAGACAAAGGATTTCAGGGTCCATTTTGTGTGTTTTGTTCGAAACTTGATATAAGTAGGAAGAGTGCCATCCATAATCCAAATTGTACATGCCATTTGTCACCACCTATGTCATCTACTTCTTCCTCCTCATCCTCGTTCTCTTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1135

Amino Acids

124.54

Weight (kDa)

4.98

Isoelectric Point (pI)

37.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 32 - 72 1e-07 Leucine rich repeat N-terminal domain
LRR_14 PF23598 88 - 270 5.1e-09 Leucine-rich repeat region
LRR_14 PF23598 372 - 588 2.3e-09 Leucine-rich repeat region
LRR_8 PF13855 379 - 439 5.9e-06 Leucine rich repeat
LRR_8 PF13855 451 - 511 2e-06 Leucine rich repeat
LRR_8 PF13855 526 - 585 6.5e-06 Leucine rich repeat
LRR_8 PF13855 693 - 751 2.7e-08 Leucine rich repeat
LRR_8 PF13855 865 - 922 3.4e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2496
Acc36I ACCTGC 1 cut(s) 2496
Acc65I GGTACC 1 cut(s) 2357
AccB1I GGYRCC 1 cut(s) 2357
AccBSI CCGCTC 1 cut(s) 2769
AccI GTMKAC 1 cut(s) 743
AciI CCGC 3 cut(s) 1461, 2311, 2769
AclWI GGATC 3 cut(s) 52, 901, 1017
AcoI YGGCCR 5 cut(s) 79, 375, 1128, 2137, 3008
AcsI RAATTY 9 cut(s) 6, 520, 717, 769, 778, 802, 1431, 1619, 3117
AcuI CTGAAG 6 cut(s) 168, 1441, 1613, 1811, 1991, 2357
AcyI GRCGYC 1 cut(s) 2332
AfaI GTAC 9 cut(s) 820, 846, 1552, 2085, 2146, 2260, 2301, 2359, 3343
AfiI CCNNNNNNNGG 4 cut(s) 322, 917, 1828, 3143
AjnI CCWGG 5 cut(s) 487, 944, 1752, 2360, 2416
AjuI GAANNNNNNNTTGG 8 cut(s) 305, 337, 769, 801, 1211, 1243, 1298, 1330
Alw21I GWGCWC 4 cut(s) 289, 601, 925, 2799
Alw26I GTCTC 5 cut(s) 79, 1269, 1345, 1718, 1950
AlwI GGATC 3 cut(s) 52, 901, 1017
Ama87I CYCGRG 2 cut(s) 1348, 1876
AoxI GGCC 7 cut(s) 79, 375, 1128, 2137, 2363, 2698, 3008
ApeKI GCWGC 1 cut(s) 660
ApoI RAATTY 9 cut(s) 6, 520, 717, 769, 778, 802, 1431, 1619, 3117
ArsI GACNNNNNNTTYG 2 cut(s) 749, 781
AseI ATTAAT 1 cut(s) 1182
Asp700I GAANNNNTTC 2 cut(s) 544, 1097
Asp718I GGTACC 1 cut(s) 2357
AspLEI GCGC 3 cut(s) 2392, 2641, 2918
AspS9I GGNCC 9 cut(s) 674, 930, 1663, 1769, 2364, 2627, 2699, 2746, 3275
AsuC2I CCSGG 1 cut(s) 594
AsuHPI GGTGA 8 cut(s) 1244, 1844, 1928, 2420, 2477, 2584, 2946, 3348
AsuII TTCGAA 2 cut(s) 2753, 3296
AvaI CYCGRG 2 cut(s) 1348, 1876
AvaII GGWCC 7 cut(s) 674, 930, 1663, 1769, 2627, 2746, 3275
BaeI ACNNNNGTAYC 2 cut(s) 1534, 1567
BalI TGGCCA 4 cut(s) 81, 377, 1130, 3010
BanI GGYRCC 1 cut(s) 2357
BanII GRGCYC 2 cut(s) 601, 925
BarI GAAGNNNNNNTAC 2 cut(s) 1380, 1412
BauI CACGAG 1 cut(s) 2608
BbsI GAAGAC 1 cut(s) 3264
Bbv12I GWGCWC 4 cut(s) 289, 601, 925, 2799
BbvI GCAGC 1 cut(s) 647
BceAI ACGGC 1 cut(s) 2124
BcgI CGANNNNNNTGC 2 cut(s) 2447, 2481
BciT130I CCWGG 5 cut(s) 489, 946, 1754, 2362, 2418
BciVI GTATCC 1 cut(s) 3140
BclI TGATCA 1 cut(s) 3235
BcnI CCSGG 1 cut(s) 594
BcoDI GTCTC 5 cut(s) 79, 1269, 1345, 1718, 1950
BfaI CTAG 7 cut(s) 941, 1763, 1896, 2159, 2180, 2204, 3125
BfmI CTRYAG 4 cut(s) 854, 1295, 1546, 2535
BfuAI ACCTGC 1 cut(s) 2496
BfuI GTATCC 1 cut(s) 3140
BglII AGATCT 1 cut(s) 834
BisI GCNGC 2 cut(s) 661, 1462
BlsI GCNGC 2 cut(s) 662, 1463
Bme1390I CCNGG 6 cut(s) 489, 594, 946, 1754, 2362, 2418
Bme18I GGWCC 7 cut(s) 674, 930, 1663, 1769, 2627, 2746, 3275
BmeT110I CYCGRG 2 cut(s) 1348, 1876
BmgT120I GGNCC 9 cut(s) 674, 930, 1663, 1769, 2364, 2627, 2699, 2746, 3275
BmiI GGNNCC 7 cut(s) 675, 932, 1393, 1465, 2044, 2359, 3276
BmrFI CCNGG 6 cut(s) 489, 594, 946, 1754, 2362, 2418
BmrI ACTGGG 2 cut(s) 2047, 2464
BmsI GCATC 5 cut(s) 523, 2414, 2455, 2521, 2950
BmuI ACTGGG 2 cut(s) 2047, 2464
BpiI GAAGAC 1 cut(s) 3264
BpmI CTGGAG 2 cut(s) 101, 510
Bpu10I CCTNAGC 1 cut(s) 2765
Bpu14I TTCGAA 2 cut(s) 2753, 3296
BpuEI CTTGAG 6 cut(s) 265, 530, 732, 974, 1654, 2756
BpuMI CCSGG 1 cut(s) 594
Bsa29I ATCGAT 2 cut(s) 257, 1683
BsaHI GRCGYC 1 cut(s) 2332
BsaI GGTCTC 1 cut(s) 79
BsaJI CCNNGG 7 cut(s) 20, 1420, 1752, 2236, 2335, 2742, 2970
BsaWI WCCGGW 2 cut(s) 1903, 2069
BsaXI ACNNNNNCTCC 6 cut(s) 1702, 1732, 3036, 3042, 3066, 3072
Bsc4I CCNNNNNNNGG 4 cut(s) 322, 917, 1828, 3143
Bse118I RCCGGY 1 cut(s) 2635
Bse3DI GCAATG 5 cut(s) 11, 626, 965, 1999, 2451
BseBI CCWGG 5 cut(s) 489, 946, 1754, 2362, 2418
BseCI ATCGAT 2 cut(s) 257, 1683
BseDI CCNNGG 7 cut(s) 20, 1420, 1752, 2236, 2335, 2742, 2970
BseGI GGATG 9 cut(s) 514, 1912, 2345, 2536, 2966, 3011, 3102, 3324, 3386
BseLI CCNNNNNNNGG 4 cut(s) 322, 917, 1828, 3143
BseMI GCAATG 5 cut(s) 11, 626, 965, 1999, 2451
BseMII CTCAG 6 cut(s) 614, 726, 1258, 1729, 2756, 2838
BseRI GAGGAG 3 cut(s) 1549, 2110, 3373
BseXI GCAGC 1 cut(s) 647
BsgI GTGCAG 1 cut(s) 483
BshFI GGCC 7 cut(s) 81, 377, 1130, 2139, 2365, 2700, 3010
BshNI GGYRCC 1 cut(s) 2357
BshVI ATCGAT 2 cut(s) 257, 1683
BsiHKAI GWGCWC 4 cut(s) 289, 601, 925, 2799
BsiHKCI CYCGRG 2 cut(s) 1348, 1876
BsiSI CCGG 4 cut(s) 593, 1904, 2070, 2636
BslFI GGGAC 6 cut(s) 687, 916, 2661, 2785, 2857, 3188
BslI CCNNNNNNNGG 4 cut(s) 322, 917, 1828, 3143
BsmAI GTCTC 5 cut(s) 79, 1269, 1345, 1718, 1950
BsmBI CGTCTC 1 cut(s) 1269
BsmFI GGGAC 6 cut(s) 687, 916, 2661, 2785, 2857, 3188
BsmI GAATGC 2 cut(s) 409, 1974
BsnI GGCC 7 cut(s) 81, 377, 1130, 2139, 2365, 2700, 3010
Bso31I GGTCTC 1 cut(s) 79
BsoBI CYCGRG 2 cut(s) 1348, 1876
Bsp119I TTCGAA 2 cut(s) 2753, 3296
Bsp1286I GDGCHC 4 cut(s) 289, 601, 925, 2799
Bsp1407I TGTACA 1 cut(s) 3341
Bsp143I GATC 9 cut(s) 57, 704, 834, 893, 1009, 1513, 2017, 2478, 3235
Bsp19I CCATGG 1 cut(s) 20
BspACI CCGC 3 cut(s) 1461, 2311, 2769
BspANI GGCC 7 cut(s) 81, 377, 1130, 2139, 2365, 2700, 3010
BspCNI CTCAG 6 cut(s) 613, 725, 1257, 1728, 2757, 2837
BspDI ATCGAT 2 cut(s) 257, 1683
BspHI TCATGA 1 cut(s) 798
BspLI GGNNCC 7 cut(s) 675, 932, 1393, 1465, 2044, 2359, 3276
BspMAI CTGCAG 1 cut(s) 858
BspMI ACCTGC 1 cut(s) 2496
BspPI GGATC 3 cut(s) 52, 901, 1017
BspQI GCTCTTC 1 cut(s) 930
BspT104I TTCGAA 2 cut(s) 2753, 3296
BspT107I GGYRCC 1 cut(s) 2357
BspTNI GGTCTC 1 cut(s) 79
BsrBI CCGCTC 1 cut(s) 2769
BsrDI GCAATG 5 cut(s) 11, 626, 965, 1999, 2451
BsrFI RCCGGY 1 cut(s) 2635
BsrGI TGTACA 1 cut(s) 3341
BssAI RCCGGY 1 cut(s) 2635
BssECI CCNNGG 7 cut(s) 20, 1420, 1752, 2236, 2335, 2742, 2970
BssMI GATC 9 cut(s) 57, 704, 834, 893, 1009, 1513, 2017, 2478, 3235
BssNI GRCGYC 1 cut(s) 2332
BssSI CACGAG 1 cut(s) 2608
BssT1I CCWWGG 6 cut(s) 20, 1420, 2236, 2335, 2742, 2970
Bst2BI CACGAG 1 cut(s) 2608
Bst2UI CCWGG 5 cut(s) 489, 946, 1754, 2362, 2418
Bst6I CTCTTC 2 cut(s) 930, 3311
BstACI GRCGYC 1 cut(s) 2332
BstAPI GCANNNNNTGC 1 cut(s) 2666
BstAUI TGTACA 1 cut(s) 3341
BstBI TTCGAA 2 cut(s) 2753, 3296
BstC8I GCNNGC 5 cut(s) 91, 218, 409, 1057, 2442
BstDEI CTNAG 6 cut(s) 600, 712, 1244, 1715, 2765, 2824
BstDSI CCRYGG 1 cut(s) 20
BstEII GGTNACC 1 cut(s) 2858
BstF5I GGATG 9 cut(s) 514, 1912, 2345, 2536, 2966, 3011, 3102, 3324, 3386
BstHHI GCGC 3 cut(s) 2392, 2641, 2918
BstKTI GATC 9 cut(s) 60, 707, 837, 896, 1012, 1516, 2020, 2481, 3238
BstMAI GTCTC 5 cut(s) 79, 1269, 1345, 1718, 1950
BstMBI GATC 9 cut(s) 57, 704, 834, 893, 1009, 1513, 2017, 2478, 3235
BstMWI GCNNNNNNNGC 5 cut(s) 413, 596, 657, 2666, 2794
BstNI CCWGG 5 cut(s) 489, 946, 1754, 2362, 2418
BstNSI RCATGY 2 cut(s) 1859, 3348
BstPI GGTNACC 1 cut(s) 2858
BstSCI CCNGG 6 cut(s) 487, 592, 944, 1752, 2360, 2416
BstSFI CTRYAG 4 cut(s) 854, 1295, 1546, 2535
BstV1I GCAGC 1 cut(s) 647
BstV2I GAAGAC 1 cut(s) 3264
BstX2I RGATCY 2 cut(s) 834, 1009
BstXI CCANNNNNNTGG 2 cut(s) 1685, 1867
BstYI RGATCY 2 cut(s) 834, 1009
Bsu15I ATCGAT 2 cut(s) 257, 1683
BsuI GTATCC 1 cut(s) 3140
BsuRI GGCC 7 cut(s) 81, 377, 1130, 2139, 2365, 2700, 3010
BsuTUI ATCGAT 2 cut(s) 257, 1683
BtgI CCRYGG 1 cut(s) 20
BtsCI GGATG 9 cut(s) 514, 1912, 2345, 2536, 2966, 3011, 3102, 3324, 3386
BtsI GCAGTG 1 cut(s) 851
BveI ACCTGC 1 cut(s) 2496
Cac8I GCNNGC 5 cut(s) 91, 218, 409, 1057, 2442
CciI TCATGA 1 cut(s) 798
CfoI GCGC 3 cut(s) 2392, 2641, 2918
Cfr10I RCCGGY 1 cut(s) 2635
Cfr13I GGNCC 9 cut(s) 674, 930, 1663, 1769, 2364, 2627, 2699, 2746, 3275
ClaI ATCGAT 2 cut(s) 257, 1683
CseI GACGC 1 cut(s) 2340
Csp6I GTAC 9 cut(s) 819, 845, 1551, 2084, 2145, 2259, 2300, 2358, 3342
CspCI CAANNNNNGTGG 4 cut(s) 145, 180, 2386, 2421
CviQI GTAC 9 cut(s) 819, 845, 1551, 2084, 2145, 2259, 2300, 2358, 3342
DdeI CTNAG 6 cut(s) 600, 712, 1244, 1715, 2765, 2824
DpnI GATC 9 cut(s) 59, 706, 836, 895, 1011, 1515, 2019, 2480, 3237
DpnII GATC 9 cut(s) 57, 704, 834, 893, 1009, 1513, 2017, 2478, 3235
EaeI YGGCCR 5 cut(s) 79, 375, 1128, 2137, 3008
Eam1104I CTCTTC 2 cut(s) 930, 3311
EarI CTCTTC 2 cut(s) 930, 3311
Ecl136II GAGCTC 2 cut(s) 599, 923
Eco130I CCWWGG 6 cut(s) 20, 1420, 2236, 2335, 2742, 2970
Eco24I GRGCYC 2 cut(s) 601, 925
Eco31I GGTCTC 1 cut(s) 79
Eco47I GGWCC 7 cut(s) 674, 930, 1663, 1769, 2627, 2746, 3275
Eco53kI GAGCTC 2 cut(s) 599, 923
Eco57I CTGAAG 6 cut(s) 168, 1441, 1613, 1811, 1991, 2357
Eco88I CYCGRG 2 cut(s) 1348, 1876
Eco91I GGTNACC 1 cut(s) 2858
EcoICRI GAGCTC 2 cut(s) 599, 923
EcoO109I RGGNCCY 3 cut(s) 674, 1769, 2699
EcoO65I GGTNACC 1 cut(s) 2858
EcoRI GAATTC 3 cut(s) 6, 802, 3117
EcoRII CCWGG 5 cut(s) 487, 944, 1752, 2360, 2416
EcoT14I CCWWGG 6 cut(s) 20, 1420, 2236, 2335, 2742, 2970
EcoT38I GRGCYC 2 cut(s) 601, 925
ErhI CCWWGG 6 cut(s) 20, 1420, 2236, 2335, 2742, 2970
Esp3I CGTCTC 1 cut(s) 1269
FalI AAGNNNNNCTT 4 cut(s) 821, 853, 1394, 1426
FaqI GGGAC 6 cut(s) 687, 916, 2661, 2785, 2857, 3188
FauI CCCGC 1 cut(s) 2762
FbaI TGATCA 1 cut(s) 3235
FblI GTMKAC 1 cut(s) 743
Fnu4HI GCNGC 2 cut(s) 661, 1462
FokI GGATG 9 cut(s) 501, 1919, 2352, 2543, 2953, 2998, 3109, 3311, 3373
FriOI GRGCYC 2 cut(s) 601, 925
Fsp4HI GCNGC 2 cut(s) 661, 1462
FspBI CTAG 7 cut(s) 941, 1763, 1896, 2159, 2180, 2204, 3125
GlaI GCGC 3 cut(s) 2391, 2640, 2917
GluI GCNGC 2 cut(s) 661, 1462
GsuI CTGGAG 2 cut(s) 101, 510
HaeIII GGCC 7 cut(s) 81, 377, 1130, 2139, 2365, 2700, 3010
HapII CCGG 4 cut(s) 593, 1904, 2070, 2636
HgaI GACGC 1 cut(s) 2340
HhaI GCGC 3 cut(s) 2392, 2641, 2918
Hin1I GRCGYC 1 cut(s) 2332
Hin6I GCGC 3 cut(s) 2390, 2639, 2916
HinP1I GCGC 3 cut(s) 2390, 2639, 2916
HincII GTYRAC 1 cut(s) 2383
HindII GTYRAC 1 cut(s) 2383
HindIII AAGCTT 1 cut(s) 698
HpaII CCGG 4 cut(s) 593, 1904, 2070, 2636
HphI GGTGA 8 cut(s) 1244, 1844, 1928, 2420, 2477, 2584, 2946, 3348
Hpy166II GTNNAC 6 cut(s) 269, 580, 744, 1081, 2300, 2383
Hpy8I GTNNAC 6 cut(s) 269, 580, 744, 1081, 2300, 2383
HpyF10VI GCNNNNNNNGC 5 cut(s) 413, 596, 657, 2666, 2794
HpyF3I CTNAG 6 cut(s) 600, 712, 1244, 1715, 2765, 2824
Hsp92I GRCGYC 1 cut(s) 2332
HspAI GCGC 3 cut(s) 2390, 2639, 2916
KpnI GGTACC 1 cut(s) 2361
Ksp22I TGATCA 1 cut(s) 3235
Kzo9I GATC 9 cut(s) 57, 704, 834, 893, 1009, 1513, 2017, 2478, 3235
LguI GCTCTTC 1 cut(s) 930
LmnI GCTCC 5 cut(s) 596, 920, 1469, 2048, 3044
Lsp1109I GCAGC 1 cut(s) 647
LweI GCATC 5 cut(s) 523, 2414, 2455, 2521, 2950
MaeI CTAG 7 cut(s) 941, 1763, 1896, 2159, 2180, 2204, 3125
MalI GATC 9 cut(s) 59, 706, 836, 895, 1011, 1515, 2019, 2480, 3237
MbiI CCGCTC 1 cut(s) 2769
MboI GATC 9 cut(s) 57, 704, 834, 893, 1009, 1513, 2017, 2478, 3235
MfeI CAATTG 1 cut(s) 2209
MflI RGATCY 2 cut(s) 834, 1009
MhlI GDGCHC 4 cut(s) 289, 601, 925, 2799
MlsI TGGCCA 4 cut(s) 81, 377, 1130, 3010
MluNI TGGCCA 4 cut(s) 81, 377, 1130, 3010
MlyI GAGTC 6 cut(s) 394, 1219, 1720, 2747, 2960, 2996
MmeI TCCRAC 5 cut(s) 1329, 1473, 1842, 2706, 2982
Mox20I TGGCCA 4 cut(s) 81, 377, 1130, 3010
MroXI GAANNNNTTC 2 cut(s) 544, 1097
MscI TGGCCA 4 cut(s) 81, 377, 1130, 3010
MseI TTAA 9 cut(s) 869, 1182, 1413, 1428, 1476, 1926, 1964, 2519, 3068
MslI CAYNNNNRTG 1 cut(s) 570
Msp20I TGGCCA 4 cut(s) 81, 377, 1130, 3010
MspA1I CMGCKG 2 cut(s) 660, 1461
MspI CCGG 4 cut(s) 593, 1904, 2070, 2636
MspR9I CCNGG 6 cut(s) 489, 594, 946, 1754, 2362, 2418
MunI CAATTG 1 cut(s) 2209
Mva1269I GAATGC 2 cut(s) 409, 1974
MvaI CCWGG 5 cut(s) 489, 946, 1754, 2362, 2418
MwoI GCNNNNNNNGC 5 cut(s) 413, 596, 657, 2666, 2794
NciI CCSGG 1 cut(s) 594
NcoI CCATGG 1 cut(s) 20
NdeII GATC 9 cut(s) 57, 704, 834, 893, 1009, 1513, 2017, 2478, 3235
NlaIV GGNNCC 7 cut(s) 675, 932, 1393, 1465, 2044, 2359, 3276
NmeAIII GCCGAG 1 cut(s) 442
NmuCI GTSAC 4 cut(s) 1832, 2513, 2952, 3354
NspI RCATGY 2 cut(s) 1859, 3348
NspV TTCGAA 2 cut(s) 2753, 3296
PaeR7I CTCGAG 2 cut(s) 1348, 1876
PagI TCATGA 1 cut(s) 798
PaqCI CACCTGC 1 cut(s) 2496
PciSI GCTCTTC 1 cut(s) 930
PctI GAATGC 2 cut(s) 409, 1974
PdmI GAANNNNTTC 2 cut(s) 544, 1097
PfoI TCCNGGA 1 cut(s) 487
PkrI GCNGC 2 cut(s) 662, 1463
PleI GAGTC 6 cut(s) 393, 1218, 1719, 2746, 2959, 2995
PpsI GAGTC 6 cut(s) 393, 1218, 1719, 2746, 2959, 2995
PpuMI RGGWCCY 2 cut(s) 674, 1769
PshBI ATTAAT 1 cut(s) 1182
Psp124BI GAGCTC 2 cut(s) 601, 925
Psp5II RGGWCCY 2 cut(s) 674, 1769
Psp6I CCWGG 5 cut(s) 487, 944, 1752, 2360, 2416
PspEI GGTNACC 1 cut(s) 2858
PspGI CCWGG 5 cut(s) 487, 944, 1752, 2360, 2416
PspN4I GGNNCC 7 cut(s) 675, 932, 1393, 1465, 2044, 2359, 3276
PspPI GGNCC 9 cut(s) 674, 930, 1663, 1769, 2364, 2627, 2699, 2746, 3275
PspPPI RGGWCCY 2 cut(s) 674, 1769
PstI CTGCAG 1 cut(s) 858
PsuI RGATCY 2 cut(s) 834, 1009
PvuII CAGCTG 1 cut(s) 660
RsaI GTAC 9 cut(s) 820, 846, 1552, 2085, 2146, 2260, 2301, 2359, 3343
RsaNI GTAC 9 cut(s) 819, 845, 1551, 2084, 2145, 2259, 2300, 2358, 3342
RseI CAYNNNNRTG 1 cut(s) 570
SacI GAGCTC 2 cut(s) 601, 925
SapI GCTCTTC 1 cut(s) 930
SaqAI TTAA 9 cut(s) 869, 1182, 1413, 1428, 1476, 1926, 1964, 2519, 3068
SatI GCNGC 2 cut(s) 661, 1462
Sau3AI GATC 9 cut(s) 57, 704, 834, 893, 1009, 1513, 2017, 2478, 3235
Sau96I GGNCC 9 cut(s) 674, 930, 1663, 1769, 2364, 2627, 2699, 2746, 3275
SchI GAGTC 6 cut(s) 394, 1219, 1720, 2747, 2960, 2996
ScrFI CCNGG 6 cut(s) 489, 594, 946, 1754, 2362, 2418
SduI GDGCHC 4 cut(s) 289, 601, 925, 2799
SfaNI GCATC 5 cut(s) 523, 2414, 2455, 2521, 2950
SfcI CTRYAG 4 cut(s) 854, 1295, 1546, 2535
Sfr274I CTCGAG 2 cut(s) 1348, 1876
SfuI TTCGAA 2 cut(s) 2753, 3296
SinI GGWCC 7 cut(s) 674, 930, 1663, 1769, 2627, 2746, 3275
SlaI CTCGAG 2 cut(s) 1348, 1876
SmiMI CAYNNNNRTG 1 cut(s) 570
SmlI CTYRAG 8 cut(s) 244, 509, 747, 989, 1348, 1633, 1876, 2735
SmoI CTYRAG 8 cut(s) 244, 509, 747, 989, 1348, 1633, 1876, 2735
SsiI CCGC 3 cut(s) 1461, 2311, 2769
SspI AATATT 1 cut(s) 1582
SspMI CTAG 7 cut(s) 941, 1763, 1896, 2159, 2180, 2204, 3125
SstI GAGCTC 2 cut(s) 601, 925
StyD4I CCNGG 6 cut(s) 487, 592, 944, 1752, 2360, 2416
StyI CCWWGG 6 cut(s) 20, 1420, 2236, 2335, 2742, 2970
TaqII GACCGA 2 cut(s) 918, 1157
TatI WGTACW 4 cut(s) 2083, 2144, 2299, 3341
TauI GCSGC 1 cut(s) 1464
Tru1I TTAA 9 cut(s) 869, 1182, 1413, 1428, 1476, 1926, 1964, 2519, 3068
Tru9I TTAA 9 cut(s) 869, 1182, 1413, 1428, 1476, 1926, 1964, 2519, 3068
TseFI GTSAC 4 cut(s) 1832, 2513, 2952, 3354
TseI GCWGC 1 cut(s) 660
Tsp45I GTSAC 4 cut(s) 1832, 2513, 2952, 3354
TspGWI ACGGA 1 cut(s) 2334
VpaK11BI GGWCC 7 cut(s) 674, 930, 1663, 1769, 2627, 2746, 3275
VspI ATTAAT 1 cut(s) 1182
XapI RAATTY 9 cut(s) 6, 520, 717, 769, 778, 802, 1431, 1619, 3117
XbaI TCTAGA 3 cut(s) 1762, 2158, 2179
XceI RCATGY 2 cut(s) 1859, 3348
XcmI CCANNNNNNNNNTGG 2 cut(s) 18, 1594
XhoI CTCGAG 2 cut(s) 1348, 1876
XmiI GTMKAC 1 cut(s) 743
XmnI GAANNNNTTC 2 cut(s) 544, 1097
XspI CTAG 7 cut(s) 941, 1763, 1896, 2159, 2180, 2204, 3125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.