Rmu_sc0006119.1_g000004

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006119.1
OG0000047
Physical Location & Seq
Forward (+)
23983 .. 27603
3621 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006119.1_g000004.1.cds

Sequence Viewer

Length: 3621 bp
atgcccactctgttcctccatttcttccttttcttattcactaccactgtttctaacctcatccccgcagttcacagcaactgtattgaagcccagaaacaatcattgctccatttcaaacaaagtcttggatttaattcttccgaatcctccaagcttatcacatggaattcgagcaccgactgctgttcttggcttggtgtaacttgcagcaccaatgggcgtgttgtcggacttgacctcagtactgagtctatctcatgccacattgacaattcaagcagtctctttcaacttcaacatcttcagagcctcaatttggctgagaacgacttcaatggctcctcaattccatctgcaatcggaaagcttacagaattgaggtatttgaatttaagtcatgcttatttttctgatcatattcccattgaaatttcactcttaacaaggctggtaactcttgatctctctgataattactaccactcgtcagaagttgagaaccggaatttaagcatgctatttcagaacctcacagagcttacaaagttatatcttgattttgtaaagatatcaggacaggggagtgactggtgcgaagccatatcatcttcactgccaaatctgagggtgttgagcttgtcttcttgtggtctttcaggccctatatgtgactcccttgcaaagcttcaatctctgtatgagattgacttgtcagataactccttctatgctccggttccaagagtctttgccaattttccaaacttgactgacttgagtcttagttattccgacttgcttggaacatttccccaagagatctttcagataccttccctacagaccattgacctttctggtaattctgatcttcatggttcatttccagaatttccaaacaatgcgtctcttcgatccttaattgtatatgggacaaatttttcaggtgacctacccaactctattggaaatcttaagatgttgtcaagcatagatatttcaaattgcaatttcgctggatcagttcccaagtcgattggaaacctcacacagttggctgacctggacatgtcagggaacagatttaatagtcccattagttctattcactgggaaacccttgttaatctagaaaccctctatttgagggacaatcaactctatgggactattccttcatctgttttttctcgtcccaaactggaaacattaacactatcccacaatcggttctcgggtcaagtccctgaattttccaatacctcttctcccttacttgagagtctttatttggaaaacaacaatttggaaggacaaataccaacatccatcttcaatcttcaagggcttgaggatcttgatctttcttcaaacaacttcagtagcttccctttttgtggtcctcaagagcccagaaagcttttattggttaatctttcccacaatagcttgttgtttgattgcaatggcaccaattcctccttccttcagattcgctacttgtcattggcttccaacaagttgagagcattcccatatttcttgagaaaccaaatcacacttaatatttcggatttggacctttcaggaaaccagatccaaggccagatacctaattggattttgagtctcaaatctcttacttcccttgatctttctggcaactccttggtaactctagaagctcctcctcctaattccacttatgctttatcttctctagaccttcattccaacaagttgagagcattcccagatttcttgagaaataagtccacattatacagcttggacctttcaaacaaccagattcaaggcgagataccaaattggattttgagtctcaaatctcttagttccctggatctttcttgcaactccttggtaactctagaagctcctcctcctaattccacttatgctttatcttatctagaccttcattccaacaagcttcaaggtatccattcctcatattccttccttcagcttcgctccctgtcattagcttctaacaagttgacaacattcccagacttcttgagaaatcaatcccatttaacctacttggacctctcggacaaccagattcaaggacagatacccaattggatttggattttggattatcttcaaaacctaaatctttcttgtaactccttggaaagtttagaagcccctccacttaattctagctatgttctgtcatcgattgatcttcattcaaaccagcttcagggacatttccccttgttcttaagtagtaggtacctagattattcgagaaataatttcagctctagtataccgactgacattggtgactttatttctgctcggtattacctttctctttcaagcaataacttccacggggcgattccaaaatcaatatgcaatgcaagtggcaatgttcttgatctgtccaataattccttaagtggaaacattccccaatgcttacctcggctttcggtcattgatgggaagagaaacaacctgagtggcacaattccggataattttttcaacatttgtgagctacaaactctagacctcagtaacaatcagatacaaggcaagtttccgaaatctcttgtcaactgctcaaagttagaggttttaaacattggaaacaataacatggctgatacttttccatgctttttaatgagcttatccaccttgcgtatccttgttttgcggtccaacaagttttatggaaacattggatgtcccaagaccagtggcacatggcctgtgcttcaaataatagatttagctcacaacaatttcagtggtgatatgccaggaagaatgtctctgacatggcaggctatggtgtctaatgaggatgattctccaactgaacttggattttcttatcagtgtagtcaatatgatagaggttgtcctgaagatgctggcatttattataaagatgcaattacggctagtatcaaaggtttagagttgcatgtggttaagattttaactatattcaccttgattgactactcctccaacaaattcaacggatcaatacctgaggaaatcggagagttgaaatcactatatgtcctcaatttatccggtaatgctttcaccggaaacatcccaacatcatttggtaagatgcggatattggagtccttagacctctcacataaccacctgagcggccaaattccaccgcagcttgcaactctcaccttcctttcgtccttggatgtctcatataatcaacttacgggaaggatcccaaccggcactcagttttcgacatttccaagtaccttctttgagggtaataaaggattatgggggcctcctctgacatcggataccgcaatcgtattgccacctccaaagtttaatggaagcccaagtaatccgaattctggagatgagattgattggaatgttatcagtgctgaaattggatttacatgtgggtttggaattgccgtcgggtcacttttgttttgcaagagatggaggaaatggtactacagggccatgtttaacatcctgttcaagatattcccaaagctggaacacagatttggtaatcacagaaggcatgtttacataaatcaaaggtattggagacgttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1206

Amino Acids

134.16

Weight (kDa)

5.58

Isoelectric Point (pI)

43.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2940
Acc65I GGTACC 1 cut(s) 2271
AccB1I GGYRCC 2 cut(s) 1472, 2271
AccBSI CCGCTC 1 cut(s) 3183
AccI GTMKAC 1 cut(s) 2308
AccIII TCCGGA 1 cut(s) 2518
AciI CCGC 6 cut(s) 66, 2707, 3142, 3183, 3197, 3351
AclWI GGATC 8 cut(s) 912, 1030, 1365, 1594, 1875, 3049, 3256, 3269
AcoI YGGCCR 1 cut(s) 3184
AcuI CTGAAG 6 cut(s) 290, 1366, 1475, 1973, 2222, 2940
AfaI GTAC 4 cut(s) 247, 2273, 3298, 3512
AfiI CCNNNNNNNGG 6 cut(s) 319, 1230, 1400, 2239, 3404, 3556
AflII CTTAAG 3 cut(s) 977, 2260, 2440
AflIII ACRYGT 2 cut(s) 1071, 3452
AjnI CCWGG 3 cut(s) 1065, 1863, 2812
AjuI GAANNNNNNNTTGG 6 cut(s) 810, 842, 1469, 1501, 3552, 3584
Alw21I GWGCWC 1 cut(s) 179
Alw26I GTCTC 7 cut(s) 290, 915, 1637, 1850, 2829, 3241, 3607
AlwI GGATC 8 cut(s) 912, 1030, 1365, 1594, 1875, 3049, 3256, 3269
AlwNI CAGNNNCTG 1 cut(s) 81
Ama87I CYCGRG 1 cut(s) 1237
Aor13HI TCCGGA 1 cut(s) 2518
AoxI GGCC 6 cut(s) 661, 1606, 2759, 3184, 3329, 3519
ApeKI GCWGC 2 cut(s) 210, 3199
ArsI GACNNNNNNTTYG 2 cut(s) 893, 925
Asp700I GAANNNNTTC 1 cut(s) 332
Asp718I GGTACC 1 cut(s) 2271
AspS9I GGNCC 8 cut(s) 662, 1403, 1582, 1795, 2074, 2709, 3329, 3519
AsuHPI GGTGA 6 cut(s) 962, 2336, 2816, 2998, 3100, 3205
AvaI CYCGRG 1 cut(s) 1237
AvaII GGWCC 5 cut(s) 1403, 1582, 1795, 2074, 2709
AxyI CCTNAGG 1 cut(s) 3051
BamHI GGATCC 1 cut(s) 3261
BanI GGYRCC 2 cut(s) 1472, 2271
BanII GRGCYC 1 cut(s) 1416
BarI GAAGNNNNNNTAC 2 cut(s) 1305, 1337
BbsI GAAGAC 1 cut(s) 636
Bbv12I GWGCWC 1 cut(s) 179
BbvI GCAGC 2 cut(s) 222, 3211
BccI CCATC 4 cut(s) 361, 1340, 2480, 3492
BceAI ACGGC 2 cut(s) 2970, 3455
BciT130I CCWGG 3 cut(s) 1067, 1865, 2814
BciVI GTATCC 3 cut(s) 1976, 2705, 3340
BclI TGATCA 1 cut(s) 415
BcoDI GTCTC 7 cut(s) 290, 915, 1637, 1850, 2829, 3241, 3607
BfmI CTRYAG 2 cut(s) 842, 3514
BfrI CTTAAG 3 cut(s) 977, 2260, 2440
BfuI GTATCC 3 cut(s) 1976, 2705, 3340
BglII AGATCT 1 cut(s) 822
BisI GCNGC 3 cut(s) 211, 3184, 3200
BlsI GCNGC 3 cut(s) 212, 3185, 3201
BmcAI AGTACT 1 cut(s) 247
Bme1390I CCNGG 3 cut(s) 1067, 1865, 2814
Bme18I GGWCC 5 cut(s) 1403, 1582, 1795, 2074, 2709
BmeT110I CYCGRG 1 cut(s) 1237
BmgT120I GGNCC 8 cut(s) 662, 1403, 1582, 1795, 2074, 2709, 3329, 3519
BmiI GGNNCC 6 cut(s) 343, 741, 1474, 2273, 3263, 3330
BmrFI CCNGG 3 cut(s) 1067, 1865, 2814
BmrI ACTGGG 1 cut(s) 1123
BmsI GCATC 3 cut(s) 2914, 2935, 3129
BmuI ACTGGG 1 cut(s) 1123
BoxI GACNNNNGTC 1 cut(s) 780
BpiI GAAGAC 1 cut(s) 636
BplI GAGNNNNNCTC 2 cut(s) 242, 274
BpmI CTGGAG 1 cut(s) 3426
Bpu10I CCTNAGC 1 cut(s) 3179
BpuEI CTTGAG 7 cut(s) 799, 1301, 1373, 1392, 1567, 1786, 2065
Bsa29I ATCGAT 1 cut(s) 2213
BsaBI GATNNNNATC 1 cut(s) 1362
BsaJI CCNNGG 8 cut(s) 1603, 1671, 1863, 1884, 2163, 2374, 2468, 3228
BsaWI WCCGGW 5 cut(s) 504, 736, 2518, 3095, 3110
BsaXI ACNNNNNCTCC 4 cut(s) 1255, 1285, 3008, 3038
Bsc4I CCNNNNNNNGG 6 cut(s) 319, 1230, 1400, 2239, 3404, 3556
Bse118I RCCGGY 1 cut(s) 3269
Bse1I ACTGG 4 cut(s) 596, 1118, 1209, 2748
Bse21I CCTNAGG 1 cut(s) 3051
Bse3DI GCAATG 4 cut(s) 104, 1474, 2407, 2419
Bse8I GATNNNNATC 1 cut(s) 1362
BseAI TCCGGA 1 cut(s) 2518
BseBI CCWGG 3 cut(s) 1067, 1865, 2814
BseCI ATCGAT 1 cut(s) 2213
BseDI CCNNGG 8 cut(s) 1603, 1671, 1863, 1884, 2163, 2374, 2468, 3228
BseGI GGATG 7 cut(s) 60, 1328, 2741, 2863, 3117, 3238, 3531
BseJI GATNNNNATC 1 cut(s) 1362
BseLI CCNNNNNNNGG 6 cut(s) 319, 1230, 1400, 2239, 3404, 3556
BseMI GCAATG 4 cut(s) 104, 1474, 2407, 2419
BseMII CTCAG 9 cut(s) 240, 256, 315, 617, 2495, 2575, 3042, 3170, 3290
BseNI ACTGG 4 cut(s) 596, 1118, 1209, 2748
BseRI GAGGAG 7 cut(s) 334, 1680, 1683, 1893, 1896, 3013, 3324
BseXI GCAGC 2 cut(s) 222, 3211
BshFI GGCC 6 cut(s) 663, 1608, 2761, 3186, 3331, 3521
BshNI GGYRCC 2 cut(s) 1472, 2271
BshVI ATCGAT 1 cut(s) 2213
BsiHKAI GWGCWC 1 cut(s) 179
BsiHKCI CYCGRG 1 cut(s) 1237
BsiSI CCGG 6 cut(s) 505, 737, 2519, 3096, 3111, 3270
BslFI GGGAC 8 cut(s) 949, 1080, 1166, 1182, 1183, 1232, 2256, 2724
BslI CCNNNNNNNGG 6 cut(s) 319, 1230, 1400, 2239, 3404, 3556
BsmAI GTCTC 7 cut(s) 290, 915, 1637, 1850, 2829, 3241, 3607
BsmBI CGTCTC 2 cut(s) 915, 3607
BsmFI GGGAC 8 cut(s) 949, 1080, 1166, 1182, 1183, 1232, 2256, 2724
BsmI GAATGC 2 cut(s) 1532, 1751
BsnI GGCC 6 cut(s) 663, 1608, 2761, 3186, 3331, 3521
BsoBI CYCGRG 1 cut(s) 1237
Bsp1286I GDGCHC 2 cut(s) 179, 1416
Bsp13I TCCGGA 1 cut(s) 2518
BspACI CCGC 6 cut(s) 66, 2707, 3142, 3183, 3197, 3351
BspANI GGCC 6 cut(s) 663, 1608, 2761, 3186, 3331, 3521
BspCNI CTCAG 9 cut(s) 241, 255, 316, 618, 2496, 2574, 3043, 3171, 3289
BspDI ATCGAT 1 cut(s) 2213
BspEI TCCGGA 1 cut(s) 2518
BspLI GGNNCC 6 cut(s) 343, 741, 1474, 2273, 3263, 3330
BspPI GGATC 8 cut(s) 912, 1030, 1365, 1594, 1875, 3049, 3256, 3269
BspT107I GGYRCC 2 cut(s) 1472, 2271
BspTI CTTAAG 3 cut(s) 977, 2260, 2440
BsrBI CCGCTC 1 cut(s) 3183
BsrDI GCAATG 4 cut(s) 104, 1474, 2407, 2419
BsrFI RCCGGY 1 cut(s) 3269
BsrI ACTGG 4 cut(s) 596, 1118, 1209, 2748
BssAI RCCGGY 1 cut(s) 3269
BssECI CCNNGG 8 cut(s) 1603, 1671, 1863, 1884, 2163, 2374, 2468, 3228
BssNAI GTATAC 1 cut(s) 2309
BssT1I CCWWGG 5 cut(s) 1603, 1671, 1884, 2163, 3228
Bst1107I GTATAC 1 cut(s) 2309
Bst2UI CCWGG 3 cut(s) 1067, 1865, 2814
Bst4CI ACNGT 3 cut(s) 49, 83, 1056
Bst6I CTCTTC 3 cut(s) 918, 1273, 2486
BstAFI CTTAAG 3 cut(s) 977, 2260, 2440
BstAPI GCANNNNNTGC 1 cut(s) 183
BstC8I GCNNGC 4 cut(s) 518, 2838, 2929, 3204
BstDSI CCRYGG 1 cut(s) 2374
BstEII GGTNACC 1 cut(s) 950
BstF5I GGATG 7 cut(s) 60, 1328, 2741, 2863, 3117, 3238, 3531
BstMAI GTCTC 7 cut(s) 290, 915, 1637, 1850, 2829, 3241, 3607
BstMWI GCNNNNNNNGC 3 cut(s) 183, 1420, 2954
BstNI CCWGG 3 cut(s) 1067, 1865, 2814
BstNSI RCATGY 5 cut(s) 520, 1075, 2984, 3456, 3590
BstPAI GACNNNNGTC 1 cut(s) 780
BstPI GGTNACC 1 cut(s) 950
BstSCI CCNGG 3 cut(s) 1065, 1863, 2812
BstSFI CTRYAG 2 cut(s) 842, 3514
BstV1I GCAGC 2 cut(s) 222, 3211
BstV2I GAAGAC 1 cut(s) 636
BstX2I RGATCY 5 cut(s) 822, 1357, 1599, 1867, 3261
BstYI RGATCY 5 cut(s) 822, 1357, 1599, 1867, 3261
BstZ17I GTATAC 1 cut(s) 2309
Bsu15I ATCGAT 1 cut(s) 2213
Bsu36I CCTNAGG 1 cut(s) 3051
BsuI GTATCC 3 cut(s) 1976, 2705, 3340
BsuRI GGCC 6 cut(s) 663, 1608, 2761, 3186, 3331, 3521
BsuTUI ATCGAT 1 cut(s) 2213
BtgI CCRYGG 1 cut(s) 2374
BtsCI GGATG 7 cut(s) 60, 1328, 2741, 2863, 3117, 3238, 3531
BtsI GCAGTG 1 cut(s) 614
BtsIMutI CAGTG 7 cut(s) 45, 614, 1111, 2755, 2806, 2897, 3439
Cac8I GCNNGC 4 cut(s) 518, 2838, 2929, 3204
CaiI CAGNNNCTG 1 cut(s) 81
Cfr10I RCCGGY 1 cut(s) 3269
Cfr13I GGNCC 8 cut(s) 662, 1403, 1582, 1795, 2074, 2709, 3329, 3519
ClaI ATCGAT 1 cut(s) 2213
CseI GACGC 1 cut(s) 897
Csp6I GTAC 4 cut(s) 246, 2272, 3297, 3511
CspCI CAANNNNNGTGG 8 cut(s) 2389, 2424, 2488, 2523, 2731, 2766, 2782, 2817
CviQI GTAC 4 cut(s) 246, 2272, 3297, 3511
DraI TTTAAA 1 cut(s) 2628
EaeI YGGCCR 1 cut(s) 3184
Eam1104I CTCTTC 3 cut(s) 918, 1273, 2486
EarI CTCTTC 3 cut(s) 918, 1273, 2486
Eco130I CCWWGG 5 cut(s) 1603, 1671, 1884, 2163, 3228
Eco24I GRGCYC 1 cut(s) 1416
Eco32I GATATC 1 cut(s) 573
Eco47I GGWCC 5 cut(s) 1403, 1582, 1795, 2074, 2709
Eco57I CTGAAG 6 cut(s) 290, 1366, 1475, 1973, 2222, 2940
Eco81I CCTNAGG 1 cut(s) 3051
Eco88I CYCGRG 1 cut(s) 1237
Eco91I GGTNACC 1 cut(s) 950
EcoO109I RGGNCCY 2 cut(s) 662, 3329
EcoO65I GGTNACC 1 cut(s) 950
EcoRI GAATTC 2 cut(s) 169, 3400
EcoRII CCWGG 3 cut(s) 1065, 1863, 2812
EcoRV GATATC 1 cut(s) 573
EcoT14I CCWWGG 5 cut(s) 1603, 1671, 1884, 2163, 3228
EcoT38I GRGCYC 1 cut(s) 1416
ErhI CCWWGG 5 cut(s) 1603, 1671, 1884, 2163, 3228
Esp3I CGTCTC 2 cut(s) 915, 3607
FalI AAGNNNNNCTT 2 cut(s) 388, 420
FaqI GGGAC 8 cut(s) 949, 1080, 1166, 1182, 1183, 1232, 2256, 2724
FauI CCCGC 1 cut(s) 73
FbaI TGATCA 1 cut(s) 415
FblI GTMKAC 1 cut(s) 2308
Fnu4HI GCNGC 3 cut(s) 211, 3184, 3200
FokI GGATG 7 cut(s) 47, 1315, 2748, 2870, 3104, 3245, 3518
FriOI GRGCYC 1 cut(s) 1416
Fsp4HI GCNGC 3 cut(s) 211, 3184, 3200
GluI GCNGC 3 cut(s) 211, 3184, 3200
GsuI CTGGAG 1 cut(s) 3426
HaeIII GGCC 6 cut(s) 663, 1608, 2761, 3186, 3331, 3521
HapII CCGG 6 cut(s) 505, 737, 2519, 3096, 3111, 3270
HgaI GACGC 1 cut(s) 897
HincII GTYRAC 2 cut(s) 2025, 2605
HindII GTYRAC 2 cut(s) 2025, 2605
HindIII AAGCTT 5 cut(s) 155, 368, 686, 1421, 1955
HpaII CCGG 6 cut(s) 505, 737, 2519, 3096, 3111, 3270
HphI GGTGA 6 cut(s) 962, 2336, 2816, 2998, 3100, 3205
Hpy166II GTNNAC 6 cut(s) 73, 1779, 2025, 2309, 2605, 3592
Hpy8I GTNNAC 6 cut(s) 73, 1779, 2025, 2309, 2605, 3592
Hpy99I CGWCG 1 cut(s) 3476
HpyCH4III ACNGT 3 cut(s) 49, 83, 1056
HpyCH4IV ACGT 1 cut(s) 3616
HpyF10VI GCNNNNNNNGC 3 cut(s) 183, 1420, 2954
HpySE526I ACGT 1 cut(s) 3616
Kpn2I TCCGGA 1 cut(s) 2518
KpnI GGTACC 1 cut(s) 2275
Ksp22I TGATCA 1 cut(s) 415
LmnI GCTCC 6 cut(s) 114, 347, 739, 1693, 1906, 2003
Lsp1109I GCAGC 2 cut(s) 222, 3211
LweI GCATC 3 cut(s) 2914, 2935, 3129
MaeII ACGT 1 cut(s) 3616
MbiI CCGCTC 1 cut(s) 3183
MfeI CAATTG 1 cut(s) 2110
MflI RGATCY 5 cut(s) 822, 1357, 1599, 1867, 3261
MhlI GDGCHC 2 cut(s) 179, 1416
MlyI GAGTC 8 cut(s) 260, 668, 756, 790, 1294, 1639, 1852, 3161
MmeI TCCRAC 8 cut(s) 211, 819, 1542, 1761, 1974, 2736, 2891, 3051
MroI TCCGGA 1 cut(s) 2518
MroXI GAANNNNTTC 1 cut(s) 332
MspCI CTTAAG 3 cut(s) 977, 2260, 2440
MspI CCGG 6 cut(s) 505, 737, 2519, 3096, 3111, 3270
MspR9I CCNGG 3 cut(s) 1067, 1865, 2814
MunI CAATTG 1 cut(s) 2110
Mva1269I GAATGC 2 cut(s) 1532, 1751
MvaI CCWGG 3 cut(s) 1067, 1865, 2814
MwoI GCNNNNNNNGC 3 cut(s) 183, 1420, 2954
NlaIV GGNNCC 6 cut(s) 343, 741, 1474, 2273, 3263, 3330
NmeAIII GCCGAG 1 cut(s) 2449
NmuCI GTSAC 5 cut(s) 587, 671, 950, 2324, 3477
NspI RCATGY 5 cut(s) 520, 1075, 2984, 3456, 3590
PaeI GCATGC 1 cut(s) 520
PciI ACATGT 2 cut(s) 1071, 3452
PctI GAATGC 2 cut(s) 1532, 1751
PdmI GAANNNNTTC 1 cut(s) 332
PfeI GAWTC 6 cut(s) 146, 1495, 1813, 2092, 2383, 2861
PkrI GCNGC 3 cut(s) 212, 3185, 3201
PleI GAGTC 8 cut(s) 259, 668, 755, 789, 1293, 1638, 1851, 3160
PpsI GAGTC 8 cut(s) 259, 668, 755, 789, 1293, 1638, 1851, 3160
PscI ACATGT 2 cut(s) 1071, 3452
PshAI GACNNNNGTC 1 cut(s) 780
PsiI TTATAA 1 cut(s) 2940
Psp6I CCWGG 3 cut(s) 1065, 1863, 2812
PspEI GGTNACC 1 cut(s) 950
PspGI CCWGG 3 cut(s) 1065, 1863, 2812
PspN4I GGNNCC 6 cut(s) 343, 741, 1474, 2273, 3263, 3330
PspPI GGNCC 8 cut(s) 662, 1403, 1582, 1795, 2074, 2709, 3329, 3519
PstNI CAGNNNCTG 1 cut(s) 81
PsuI RGATCY 5 cut(s) 822, 1357, 1599, 1867, 3261
RsaI GTAC 4 cut(s) 247, 2273, 3298, 3512
RsaNI GTAC 4 cut(s) 246, 2272, 3297, 3511
SatI GCNGC 3 cut(s) 211, 3184, 3200
Sau96I GGNCC 8 cut(s) 662, 1403, 1582, 1795, 2074, 2709, 3329, 3519
ScaI AGTACT 1 cut(s) 247
SchI GAGTC 8 cut(s) 260, 668, 756, 790, 1294, 1639, 1852, 3161
ScrFI CCNGG 3 cut(s) 1067, 1865, 2814
SduI GDGCHC 2 cut(s) 179, 1416
SfaNI GCATC 3 cut(s) 2914, 2935, 3129
SfcI CTRYAG 2 cut(s) 842, 3514
SinI GGWCC 5 cut(s) 1403, 1582, 1795, 2074, 2709
SphI GCATGC 1 cut(s) 520
SsiI CCGC 6 cut(s) 66, 2707, 3142, 3183, 3197, 3351
SspI AATATT 1 cut(s) 1570
StyD4I CCNGG 3 cut(s) 1065, 1863, 2812
StyI CCWWGG 5 cut(s) 1603, 1671, 1884, 2163, 3228
TaaI ACNGT 3 cut(s) 49, 83, 1056
TaiI ACGT 1 cut(s) 3619
TaqI TCGA 6 cut(s) 173, 916, 1037, 2213, 2285, 3284
TaqII GACCGA 1 cut(s) 2467
TatI WGTACW 1 cut(s) 245
TauI GCSGC 1 cut(s) 3186
TfiI GAWTC 6 cut(s) 146, 1495, 1813, 2092, 2383, 2861
TscAI CASTG 7 cut(s) 52, 621, 1118, 2755, 2806, 2897, 3439
TseFI GTSAC 5 cut(s) 587, 671, 950, 2324, 3477
TseI GCWGC 2 cut(s) 210, 3199
Tsp45I GTSAC 5 cut(s) 587, 671, 950, 2324, 3477
TspDTI ATGAA 6 cut(s) 866, 873, 1170, 1721, 1934, 2213
TspGWI ACGGA 1 cut(s) 3054
TspRI CASTG 7 cut(s) 52, 621, 1118, 2755, 2806, 2897, 3439
Vha464I CTTAAG 3 cut(s) 977, 2260, 2440
VpaK11BI GGWCC 5 cut(s) 1403, 1582, 1795, 2074, 2709
XbaI TCTAGA 6 cut(s) 1132, 1681, 1723, 1894, 1936, 2554
XceI RCATGY 5 cut(s) 520, 1075, 2984, 3456, 3590
XmiI GTMKAC 1 cut(s) 2308
XmnI GAANNNNTTC 1 cut(s) 332
ZrmI AGTACT 1 cut(s) 247
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.