RchiOBHm_Chr1g0316291

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000047
Physical Location & Seq
Forward (+)
3544121 .. 3547216
3096 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54674

Sequence Viewer

Length: 3096 bp
ATGATAACTTTGATCTTCCATTTCTTCCTCTTCTTGATCACTCCTTGTGTTACTAACCTCATCCCTACTGTTCACAGCAAATGTATTGAAGCCCAGAAAGAATCATTGCTCAATTTCAAGAAAAGTCTTGTATTTAATTCTTCTTCTTCCTCCAAGCTCATAACATGGAATTCGAATACCGAATGCTGTACTTGGACCGGAGTAACTTGCAGCACTAATGGGAGTGTTGTTGGACTTGACATCAGTAGCGAGTCTATCTCATGCAACATTGACAATTCCAGCAGTCTTTTCCAACTACAACATCTTCAGAGACTCAATTTAGCCTATACTAATTTCAGTGGCTCTTCAATTCCATCTGCAATCGGAAAGCTTATAGAGTTGAGGTATCTGAATTTAAGAGGGGCTTATTTTTCTGGGAAAATTCCAATCGAGGTTGCACACTTAACGAGGCTGGTAGTTCTTGATCTCTCTTATAATTCCTATCCCTTTTTTGCTGAGAACCAGAATTTGAGCATGCTAATTCAGAACCTCACAGAGCTTACAGAATTATATCTTGATCATATAAACCTGTCGGCTGAGGGATCTCACTGGGGCCAAACCATATCATCTTCACTCCCAAAGCTGAGTGTGTTGACCTTGTCCTTTTGTGATCTTCGAGGCCCTATTCATGAATCGTTTGCCAAGCTTGATTCTCTATCCACGTTAATATTGTATGGAAACAATATCTCTGGTCTGGTTCCAAAATTCCTTGCCAATTTTTCAAGCTTGATTTCCTTGAGTCTCTCCGCTTGTAACTTGTACGGAGCATTTCCCAAAGAGATATTCCAGGTACCTACACTAAAGTCTGTTGACCTATCAGTTAATTCAGAGCTTCGTGGTTCCTTACCTGAATTTCTAAAGAATGTATCTCTTGAATCCCTAGTTCTATCCAGGACTAAGTTTTCAGGTGTCTTGCCAGACTCTATTGGCAACCTTGAAATGCTGTCTAGATTATATGTTTCAGATTGCAATTTCACAGGGGCAATTCCAAAGTCACTGGCAAACCTAACACAATTGAGGTTTTTGGCCTTGTCATCCAACAAGTTTTCTGGTTCGATTAATTATATTCAATGGGACAAACTCATCAAGCTTGAGCTTCTCGACTTGTCCAACAATCTTCTTTACAGGAGTATTCCATTGTCTCCCTTTTCTATTCGCTGGCTGCGGAGGTTAGATCTTTCTGGAAATCACTTCTCTGGTCAGGTGCTTGAATTTTCTAATGTCTCTTCGTACTTGCTGTACATACTTGATTTGAGTAGCAACAATTTGGAAGGATCAATACCCGTGTCTATCTTTAATCTTCTAGGGCTTCAAGAGTTAAATCTTTCTTCAAACAACTTGAGTGATTTTCCTTTTTATGGCCTTCACGAGTCGAGAAATCTTTCATTTCTTGATCTATCCCACAATAGCTTGTTGTCCAATCATAATGGTACCAACTCATCACACCCCTCCCTCCTTCAGATTCAGGCCTTGAAGTTGGATTTTAACAAGTTGAAAACATTCCCAAATTTCCTGAAAAATCAATCTAGTTTAGCCTACTTGGATCTTTCAGACAACCAGATTCCAGGTCAGATACCCAATTGGATATGGGGGCTTCCTCTCAAAACTCTAGGTCTCTGTTGTAACAAGTTGGTAAGTCTAGAAGCCCCTTTACTTGGTTCTACTTACAATCTGTTGAATATTGATCTTCACTCAAACCAGCTTCAGGGACAAATACCATTGTTCATAAGTGGTAATTATTTGGATTACTCAAGAAATAATTTCAGCTCTAGCATACCAACTGATATTGGTGATTTCATTTCTTCCACGGCCTACCTTTCTCTTTCAAGCAGTAACTTGTATGGGGAAATTCCAATATCAATATGCAATGCAAGTGGCATAGTTCTTGATCTCTCTAATAACTCTTTGAGTGGAATCATTCCCCAATGCTTGACTCAGGCATCTTCGCTTAATGTCCTTGATTTGAGGAGAAACAACCTTAATGGATCTATCCCCGATACTTTTCTTCAAGGTTGTAATTTGCAAAGTCTAGCTCTGAGCAGAAATCATATACAAGGTCGATTTCCAAAATCTCTAGCCAATTGTTCAATCTTAGAGGTTTTAGACCTTGGAGTCAATCAAATAATAGATGTTTTTCCCTGCATGTTGAAGACCATATCCACCTTGCGTGTCCTTGTGTTGCGATCCAACAAATTTTATGGACCCATTGGATGTCCTGAGACCAATGGCACCTGGCCGAAGCTTCAAATCATAGACTTAGCTCATAACAGTTTCAATGGTGAAATACCCGGTATGTCATTGACAACATGGAAGGCAATGATGGTTAATGAAGATAATTACCAATCTCCCCGTAGCTTTTGGTGGGGAGCAGGTGGTGGAAGTGGGCACTCTATTCAATTGGAAGATGTAGTAACAACTACAATCAAAGGTCTAGAGATGGATCTTGTATATATTTTAACTATCTTCACTTCGATTGACTTCTCTGGTAACAAGTTCAGCGGAACAATACCCAAGGAAATTGGCCTACTGAGATCATTACATGTCCTTAATCTGTCCAGTAATGCTTTCACAGGCGAAATCCCATCATCCTTTGGTAACATGAGAACCATCGAGTCCTTAGACCTCTCACAAAACCACCTGAGCGGCCAAATTCCACCACAATTTGCAAATCTCACTTTTCTTTCGTACTTGAATGTCTCATATAATCAACTGACGGGAAGGATCCCAACCGCCACTCAGTTATCGACATTTCCAAATACCTCCTTCGAGGGTAACAAAGGATTATGGGGGCCTCCTCTGACATCGGATACAACAATCGTAGTACCACCTCCAACGTTAAATGGAAGCTCAAGTAAGCCGAATTCTGGAGATGAGATTGAGTTGAATGTTCTCAGTGCTGACATTGGATTTACATGTGGGTTTGCAATTGTCGTCGGGTCACTTTTGTTTTGCAAGAGATGGAGGAAATGGTACTACAGAGCTATGTTTAACATCCTGTTCAAGATATTCCCTCAGCTGGAACACAGATTTGGTAATCACAGAAGGCATTTTACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1031

Amino Acids

114.04

Weight (kDa)

6.6

Isoelectric Point (pI)

37.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 71 7.2e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 92 - 288 5.9e-12 Leucine-rich repeat region
LRR_8 PF13855 426 - 484 1.1e-06 Leucine rich repeat
LRR_8 PF13855 686 - 745 3.6e-07 Leucine rich repeat
LRR_8 PF13855 857 - 917 2.8e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 474
AarI CACCTGC 1 cut(s) 2399
AasI GACNNNNNNGTC 1 cut(s) 2150
Acc36I ACCTGC 1 cut(s) 2399
Acc65I GGTACC 2 cut(s) 829, 1469
AccB1I GGYRCC 3 cut(s) 829, 1469, 2267
AccBSI CCGCTC 1 cut(s) 2682
AciI CCGC 5 cut(s) 786, 1204, 2538, 2682, 2769
AclI AACGTT 1 cut(s) 2873
AclWI GGATC 8 cut(s) 589, 1321, 1590, 2032, 2217, 2487, 2755, 2768
AcoI YGGCCR 2 cut(s) 2273, 2683
AcuI CTGAAG 3 cut(s) 290, 1481, 1727
AfaI GTAC 9 cut(s) 190, 800, 831, 1271, 1280, 1471, 2726, 2862, 3011
AfiI CCNNNNNNNGG 5 cut(s) 1397, 1694, 1744, 2903, 3055
AflIII ACRYGT 2 cut(s) 2578, 2951
AjnI CCWGG 4 cut(s) 825, 929, 1603, 2270
AjuI GAANNNNNNNTTGG 4 cut(s) 806, 838, 3051, 3083
Alw26I GTCTC 7 cut(s) 304, 785, 1185, 1267, 1658, 2252, 2740
AlwI GGATC 8 cut(s) 589, 1321, 1590, 2032, 2217, 2487, 2755, 2768
ApeKI GCWGC 2 cut(s) 210, 1201
AseI ATTAAT 1 cut(s) 1098
Asp700I GAANNNNTTC 2 cut(s) 1420, 1538
Asp718I GGTACC 2 cut(s) 829, 1469
AspS9I GGNCC 5 cut(s) 195, 592, 659, 2240, 2828
AsuC2I CCSGG 1 cut(s) 2328
AsuHPI GGTGA 2 cut(s) 1841, 2330
AsuII TTCGAA 1 cut(s) 173
AvaII GGWCC 2 cut(s) 195, 2240
BaeGI GKGCMC 1 cut(s) 2427
BamHI GGATCC 1 cut(s) 2760
BanI GGYRCC 3 cut(s) 829, 1469, 2267
BarI GAAGNNNNNNTAC 5 cut(s) 1302, 1334, 1674, 1706, 3073
BauI CACGAG 1 cut(s) 1406
BbsI GAAGAC 1 cut(s) 2195
BbvCI CCTCAGC 2 cut(s) 576, 3051
BbvI GCAGC 2 cut(s) 222, 1188
BccI CCATC 6 cut(s) 361, 2353, 2470, 2629, 2654, 2991
BceAI ACGGC 1 cut(s) 1863
BciT130I CCWGG 4 cut(s) 827, 931, 1605, 2272
BciVI GTATCC 1 cut(s) 2839
BclI TGATCA 2 cut(s) 36, 556
BcnI CCSGG 1 cut(s) 2328
BcoDI GTCTC 7 cut(s) 304, 785, 1185, 1267, 1658, 2252, 2740
BfmI CTRYAG 1 cut(s) 3013
BfuAI ACCTGC 1 cut(s) 2399
BfuI GTATCC 1 cut(s) 2839
BglII AGATCT 1 cut(s) 1213
BisI GCNGC 3 cut(s) 211, 1202, 2683
BlsI GCNGC 3 cut(s) 212, 1203, 2684
Bme1390I CCNGG 5 cut(s) 827, 931, 1605, 2272, 2328
Bme18I GGWCC 2 cut(s) 195, 2240
BmgT120I GGNCC 5 cut(s) 195, 592, 659, 2240, 2828
BmiI GGNNCC 9 cut(s) 593, 738, 831, 880, 1471, 2242, 2269, 2762, 2829
BmrFI CCNGG 5 cut(s) 827, 931, 1605, 2272, 2328
BmrI ACTGGG 1 cut(s) 598
BmsI GCATC 1 cut(s) 1988
BmuI ACTGGG 1 cut(s) 598
BpiI GAAGAC 1 cut(s) 2195
BplI GAGNNNNNCTC 2 cut(s) 242, 274
BpmI CTGGAG 1 cut(s) 2925
Bpu10I CCTNAGC 3 cut(s) 576, 2678, 3051
Bpu14I TTCGAA 1 cut(s) 173
BpuEI CTTGAG 5 cut(s) 796, 1151, 1399, 1774, 2872
BpuMI CCSGG 1 cut(s) 2328
BsaI GGTCTC 2 cut(s) 1658, 2252
BsaJI CCNNGG 3 cut(s) 1845, 2146, 2550
BsaWI WCCGGW 1 cut(s) 197
Bsc4I CCNNNNNNNGG 5 cut(s) 1397, 1694, 1744, 2903, 3055
Bse1I ACTGG 3 cut(s) 593, 1041, 2595
Bse3DI GCAATG 3 cut(s) 104, 1912, 2361
BseBI CCWGG 4 cut(s) 827, 931, 1605, 2272
BseDI CCNNGG 3 cut(s) 1845, 2146, 2550
BseGI GGATG 5 cut(s) 60, 1073, 2255, 2624, 3030
BseLI CCNNNNNNNGG 5 cut(s) 1397, 1694, 1744, 2903, 3055
BseMI GCAATG 3 cut(s) 104, 1912, 2361
BseNI ACTGG 3 cut(s) 593, 1041, 2595
BseRI GAGGAG 2 cut(s) 2020, 2823
BseSI GKGCMC 1 cut(s) 2427
BseXI GCAGC 2 cut(s) 222, 1188
BshNI GGYRCC 3 cut(s) 829, 1469, 2267
BsiSI CCGG 2 cut(s) 198, 2328
BslFI GGGAC 2 cut(s) 1127, 1761
BslI CCNNNNNNNGG 5 cut(s) 1397, 1694, 1744, 2903, 3055
BsmAI GTCTC 7 cut(s) 304, 785, 1185, 1267, 1658, 2252, 2740
BsmFI GGGAC 2 cut(s) 1127, 1761
BsmI GAATGC 1 cut(s) 188
Bso31I GGTCTC 2 cut(s) 1658, 2252
Bsp119I TTCGAA 1 cut(s) 173
Bsp1286I GDGCHC 1 cut(s) 2427
Bsp1407I TGTACA 1 cut(s) 1278
BspACI CCGC 5 cut(s) 786, 1204, 2538, 2682, 2769
BspHI TCATGA 1 cut(s) 667
BspLI GGNNCC 9 cut(s) 593, 738, 831, 880, 1471, 2242, 2269, 2762, 2829
BspMI ACCTGC 1 cut(s) 2399
BspPI GGATC 8 cut(s) 589, 1321, 1590, 2032, 2217, 2487, 2755, 2768
BspQI GCTCTTC 1 cut(s) 349
BspT104I TTCGAA 1 cut(s) 173
BspT107I GGYRCC 3 cut(s) 829, 1469, 2267
BspTNI GGTCTC 2 cut(s) 1658, 2252
BsrBI CCGCTC 1 cut(s) 2682
BsrDI GCAATG 3 cut(s) 104, 1912, 2361
BsrGI TGTACA 1 cut(s) 1278
BsrI ACTGG 3 cut(s) 593, 1041, 2595
BssECI CCNNGG 3 cut(s) 1845, 2146, 2550
BssSI CACGAG 1 cut(s) 1406
BssT1I CCWWGG 2 cut(s) 2146, 2550
Bst2BI CACGAG 1 cut(s) 1406
Bst2UI CCWGG 4 cut(s) 827, 931, 1605, 2272
Bst4CI ACNGT 2 cut(s) 70, 2309
Bst6I CTCTTC 3 cut(s) 35, 349, 1270
BstAUI TGTACA 1 cut(s) 1278
BstBI TTCGAA 1 cut(s) 173
BstC8I GCNNGC 2 cut(s) 515, 1199
BstDSI CCRYGG 1 cut(s) 1845
BstF5I GGATG 5 cut(s) 60, 1073, 2255, 2624, 3030
BstMAI GTCTC 7 cut(s) 304, 785, 1185, 1267, 1658, 2252, 2740
BstNI CCWGG 4 cut(s) 827, 931, 1605, 2272
BstNSI RCATGY 4 cut(s) 517, 2185, 2582, 2955
BstSCI CCNGG 5 cut(s) 825, 929, 1603, 2270, 2326
BstSFI CTRYAG 1 cut(s) 3013
BstSLI GKGCMC 1 cut(s) 2427
BstV1I GCAGC 2 cut(s) 222, 1188
BstV2I GAAGAC 1 cut(s) 2195
BstX2I RGATCY 6 cut(s) 581, 1213, 1582, 2024, 2479, 2760
BstYI RGATCY 6 cut(s) 581, 1213, 1582, 2024, 2479, 2760
BsuI GTATCC 1 cut(s) 2839
BtgI CCRYGG 1 cut(s) 1845
BtsCI GGATG 5 cut(s) 60, 1073, 2255, 2624, 3030
BtsIMutI CAGTG 4 cut(s) 343, 586, 1034, 2938
BveI ACCTGC 1 cut(s) 2399
Cac8I GCNNGC 2 cut(s) 515, 1199
CciI TCATGA 1 cut(s) 667
Cfr13I GGNCC 5 cut(s) 195, 592, 659, 2240, 2828
Csp6I GTAC 9 cut(s) 189, 799, 830, 1270, 1279, 1470, 2725, 2861, 3010
CspCI CAANNNNNGTGG 2 cut(s) 1894, 1929
CviAII CATG 9 cut(s) 165, 261, 514, 668, 2182, 2346, 2579, 2638, 2952
CviQI GTAC 9 cut(s) 189, 799, 830, 1270, 1279, 1470, 2725, 2861, 3010
DrdI GACNNNNNNGTC 1 cut(s) 2150
DseDI GACNNNNNNGTC 1 cut(s) 2150
EaeI YGGCCR 2 cut(s) 2273, 2683
Eam1104I CTCTTC 3 cut(s) 35, 349, 1270
EarI CTCTTC 3 cut(s) 35, 349, 1270
Eco130I CCWWGG 2 cut(s) 2146, 2550
Eco147I AGGCCT 1 cut(s) 1508
Eco31I GGTCTC 2 cut(s) 1658, 2252
Eco47I GGWCC 2 cut(s) 195, 2240
Eco57I CTGAAG 3 cut(s) 290, 1481, 1727
EcoO109I RGGNCCY 2 cut(s) 659, 2828
EcoRI GAATTC 2 cut(s) 169, 2899
EcoRII CCWGG 4 cut(s) 825, 929, 1603, 2270
EcoT14I CCWWGG 2 cut(s) 2146, 2550
ErhI CCWWGG 2 cut(s) 2146, 2550
FaeI CATG 9 cut(s) 168, 264, 517, 671, 2185, 2349, 2582, 2641, 2955
FalI AAGNNNNNCTT 2 cut(s) 388, 420
FaqI GGGAC 2 cut(s) 1127, 1761
FatI CATG 9 cut(s) 164, 260, 513, 667, 2181, 2345, 2578, 2637, 2951
FbaI TGATCA 2 cut(s) 36, 556
Fnu4HI GCNGC 3 cut(s) 211, 1202, 2683
FokI GGATG 5 cut(s) 47, 1060, 2262, 2611, 3017
Fsp4HI GCNGC 3 cut(s) 211, 1202, 2683
GluI GCNGC 3 cut(s) 211, 1202, 2683
GsuI CTGGAG 1 cut(s) 2925
HapII CCGG 2 cut(s) 198, 2328
Hin1II CATG 9 cut(s) 168, 264, 517, 671, 2185, 2349, 2582, 2641, 2955
HincII GTYRAC 2 cut(s) 633, 850
HindII GTYRAC 2 cut(s) 633, 850
HindIII AAGCTT 5 cut(s) 368, 683, 763, 1127, 2279
HpaII CCGG 2 cut(s) 198, 2328
HphI GGTGA 2 cut(s) 1841, 2330
Hpy166II GTNNAC 3 cut(s) 73, 633, 850
Hpy8I GTNNAC 3 cut(s) 73, 633, 850
Hpy99I CGWCG 1 cut(s) 2975
HpyAV CCTTC 7 cut(s) 1304, 1412, 1505, 2344, 2751, 2812, 3075
HpyCH4III ACNGT 2 cut(s) 70, 2309
HpyCH4IV ACGT 2 cut(s) 701, 2873
HpySE526I ACGT 2 cut(s) 701, 2873
Hsp92II CATG 9 cut(s) 168, 264, 517, 671, 2185, 2349, 2582, 2641, 2955
KpnI GGTACC 2 cut(s) 833, 1473
Ksp22I TGATCA 2 cut(s) 36, 556
LguI GCTCTTC 1 cut(s) 349
LmnI GCTCC 2 cut(s) 803, 2405
Lsp1109I GCAGC 2 cut(s) 222, 1188
LweI GCATC 1 cut(s) 1988
MaeII ACGT 2 cut(s) 701, 2873
MbiI CCGCTC 1 cut(s) 2682
MfeI CAATTG 5 cut(s) 1052, 1618, 2119, 2435, 2964
MflI RGATCY 6 cut(s) 581, 1213, 1582, 2024, 2479, 2760
MhlI GDGCHC 1 cut(s) 2427
MlyI GAGTC 8 cut(s) 260, 306, 787, 953, 1418, 1966, 2160, 2660
MmeI TCCRAC 7 cut(s) 211, 316, 1101, 1173, 1497, 2250, 2894
MroXI GAANNNNTTC 2 cut(s) 1420, 1538
MspA1I CMGCKG 2 cut(s) 2538, 3055
MspI CCGG 2 cut(s) 198, 2328
MspR9I CCNGG 5 cut(s) 827, 931, 1605, 2272, 2328
MunI CAATTG 5 cut(s) 1052, 1618, 2119, 2435, 2964
Mva1269I GAATGC 1 cut(s) 188
MvaI CCWGG 4 cut(s) 827, 931, 1605, 2272
NciI CCSGG 1 cut(s) 2328
NlaIII CATG 9 cut(s) 168, 264, 517, 671, 2185, 2349, 2582, 2641, 2955
NlaIV GGNNCC 9 cut(s) 593, 738, 831, 880, 1471, 2242, 2269, 2762, 2829
NmuCI GTSAC 2 cut(s) 1032, 2976
NspI RCATGY 4 cut(s) 517, 2185, 2582, 2955
NspV TTCGAA 1 cut(s) 173
PaeI GCATGC 1 cut(s) 517
PagI TCATGA 1 cut(s) 667
PaqCI CACCTGC 1 cut(s) 2399
PceI AGGCCT 1 cut(s) 1508
PciI ACATGT 2 cut(s) 2578, 2951
PciSI GCTCTTC 1 cut(s) 349
PctI GAATGC 1 cut(s) 188
PdmI GAANNNNTTC 2 cut(s) 1420, 1538
PfeI GAWTC 7 cut(s) 101, 671, 689, 914, 1501, 1600, 1953
PflFI GACNNNGTC 1 cut(s) 637
PfoI TCCNGGA 1 cut(s) 929
PkrI GCNGC 3 cut(s) 212, 1203, 2684
PleI GAGTC 8 cut(s) 259, 306, 786, 953, 1417, 1966, 2159, 2659
PpsI GAGTC 8 cut(s) 259, 306, 786, 953, 1417, 1966, 2159, 2659
PscI ACATGT 2 cut(s) 2578, 2951
PshBI ATTAAT 1 cut(s) 1098
PsiI TTATAA 1 cut(s) 474
Psp1406I AACGTT 1 cut(s) 2873
Psp6I CCWGG 4 cut(s) 825, 929, 1603, 2270
PspGI CCWGG 4 cut(s) 825, 929, 1603, 2270
PspN4I GGNNCC 9 cut(s) 593, 738, 831, 880, 1471, 2242, 2269, 2762, 2829
PspPI GGNCC 5 cut(s) 195, 592, 659, 2240, 2828
PsuI RGATCY 6 cut(s) 581, 1213, 1582, 2024, 2479, 2760
PsyI GACNNNGTC 1 cut(s) 637
PvuII CAGCTG 1 cut(s) 3055
RsaI GTAC 9 cut(s) 190, 800, 831, 1271, 1280, 1471, 2726, 2862, 3011
RsaNI GTAC 9 cut(s) 189, 799, 830, 1270, 1279, 1470, 2725, 2861, 3010
SapI GCTCTTC 1 cut(s) 349
SatI GCNGC 3 cut(s) 211, 1202, 2683
Sau96I GGNCC 5 cut(s) 195, 592, 659, 2240, 2828
SchI GAGTC 8 cut(s) 260, 306, 787, 953, 1418, 1966, 2160, 2660
ScrFI CCNGG 5 cut(s) 827, 931, 1605, 2272, 2328
SduI GDGCHC 1 cut(s) 2427
SfaNI GCATC 1 cut(s) 1988
SfcI CTRYAG 1 cut(s) 3013
SfuI TTCGAA 1 cut(s) 173
SinI GGWCC 2 cut(s) 195, 2240
SmlI CTYRAG 5 cut(s) 775, 1130, 1378, 1789, 2887
SmoI CTYRAG 5 cut(s) 775, 1130, 1378, 1789, 2887
SphI GCATGC 1 cut(s) 517
SseBI AGGCCT 1 cut(s) 1508
SsiI CCGC 5 cut(s) 786, 1204, 2538, 2682, 2769
SspI AATATT 2 cut(s) 708, 1720
StuI AGGCCT 1 cut(s) 1508
StyD4I CCNGG 5 cut(s) 825, 929, 1603, 2270, 2326
StyI CCWWGG 2 cut(s) 2146, 2550
TaaI ACNGT 2 cut(s) 70, 2309
TaiI ACGT 2 cut(s) 704, 2876
TatI WGTACW 2 cut(s) 188, 1278
TauI GCSGC 1 cut(s) 2685
TfiI GAWTC 7 cut(s) 101, 671, 689, 914, 1501, 1600, 1953
TscAI CASTG 4 cut(s) 343, 593, 1041, 2938
TseFI GTSAC 2 cut(s) 1032, 2976
TseI GCWGC 2 cut(s) 210, 1201
Tsp45I GTSAC 2 cut(s) 1032, 2976
TspDTI ATGAA 6 cut(s) 656, 684, 1413, 1753, 1825, 2382
TspGWI ACGGA 1 cut(s) 816
TspRI CASTG 4 cut(s) 343, 593, 1041, 2938
Tth111I GACNNNGTC 1 cut(s) 637
VpaK11BI GGWCC 2 cut(s) 195, 2240
VspI ATTAAT 1 cut(s) 1098
XbaI TCTAGA 3 cut(s) 986, 1678, 2470
XceI RCATGY 4 cut(s) 517, 2185, 2582, 2955
XmnI GAANNNNTTC 2 cut(s) 1420, 1538
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.