RchiOBHm_Chr3g0478051

receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Forward (+)
23897479 .. 23900586
3108 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ44329

Sequence Viewer

Length: 3108 bp
ATGCTCACTCTGTTCCTCCATTTCTTCCTTTTCTTATTCACAACCACTGTTTCTAACCTCATCCCCGCATTTCACAGAAACTGCATTGAAGCCCAGCAACAATCATTGCTCCATTTCAAGAAAAGTCTTGAATTTGATTCTTCCGAATCCTCCAAGCTTATCACATGGAATTCGAGTACCGAGTGCTGTTCTTGGCTCGGTGTAACTTGCAGCACTTATGGGCGTGTTGTCGGACTTGACCTCAGCAGCGAGTCTTTCTCATGCAGCATTGACAATTCCAGCAGTCTCTTCCAACTTCAACATCTTCAGAGCCTCAATTTCGCCGATAACGACTTCAATCGTTCTTCAATTCCATCTGCAATCGGAAAGCTTACAGAGTTGAGGTATTTGAATTTAAGTGGAGCTGAATTTACTGGGCAAATTCCCATTGAGGTTGCACACTTGAAGAGGTTGAAGGTTCTTGATCTCTCTAGAAATGGTGAGGAGTTAAAACTTGGGAAGCGGAATTTAGGCACTTTAATCCAGAACCTTACAGAGCTTTCCGATCTTAGTCTTGATGGTGTAAACCTATCAGCTGAGGGATCTCTATGGAGCCAAACCATATCATCTTCACTTCCAAAGCTGAGTGTGTTGAGCTTGTACAATTGTGATCTTTCAGGCCCTATTCATGAATCATTTTCCAGGCTTGATTCTCTATCCACGTTAATATTGGATGGAAACAACATCTCTGGTCCTGTTCCAAAATTCTTTGCCAATTTTTCAAGCTTGATTTCCTTGAGTCTCAGTGATTGTAACTTCTATGGAGCATTTCCCAAAGAGATATTCCAGATACCTTCACTACAGTCTGTTGACCTAAAAGCTAATTTAGAGCTTCGTGGTTCCTTACCGGAGTTTCCAAAGAATGGATCTCTCGAATCCCTAGTTCTATCCGGGACTAAGTTCTCAGGAGTCTTGCCGGACTCTATTGGCAACCTTAAAATGCTGTCTGAATTGGATCTTAGAGAATGCAATTTCACAGGAGCAGTTCCAAAGTCATTGGCCAACCTAACACAATTGGGGCATTTGTACTTGTCATCCAACAAGTTTTCTAGTCCGATTAATTCTATTCAATGGGACAAACTCATCAAGCTTGTGGATCTCGACTTGTCCGACAATCTACTCTACGGGAGTATTCCATTGTCTCCCTTCTCAATTCCCTTGCTGCAGAGTTTAGATCTTTCTGGAAATAACTTCTCTGGTCAGTTGCTTGAATTTTCTAATGTCTCTTCGTCCTCGCTATTCTCTCTTGATTTGAGTAGCAACAATTTGGAAGGATCCATACCTGTGTCTATCCTTAATCTTCCAGAGCTTGATATCATTAATCTTTCTTCAAACAACTTGAGTGGTTTTCCTTTTTATGGCCTTCCGGAGTCGAGAGATCTTTCTTCTCTTGATCTATCCTTCAATAGCTTGTTGTTCAATCATAATGGTACCAACTCATCACCGCCCTCCCTCCTTCAGTCTAAGTACTTGAATTTGGCTTCTAACAAGTTGAAAACATTCCCAAATTTCTTGAAAAATCAATCTTCTTTAACCGTATTGGACCTTTCAGACAACCAGATTCCAGGCCAGATACCCAATTGGATTTGGGAGCTTCGTCTCCAAGTTCTAAATCTATGTTGTAACAAGTTCGTAAGTCTACAAGCTCCTTTACTTGGTTCTACTTACCAACTGATGAGGCTTGATCTTCACTCAAACCAGATTCAGGGACAAATACCATTGTTTCTAAGTGGTGAATATTTGGATTACTCAACAAATAATTTCAGCTCTAGTATGCCAACTGACATTGGTGATTTCATTCCTTCCACGACCTACCTTTCTCTTTCAAGCAGTAACTTGTATGGGGAAATTCCAAAGTCAATATGCAATGTAAGTGGTGCAGCTCTTGATCTCTCTAATAACTCTTTGAGTGGAACCATTCCCCAATGCTTGACTCAGACTATTCTTTCTGTTGTTGATTTGAGGAGAAACAACCTTACTGGATCTATCCCCGATAATTTTCTTGAAGGTTGTCTGTTCGAAACTCTAGCTCTGGGCAGAAATCAGATACAAGGTCAATTTCCAAAATCTCTAGCCAATTGTTCAAGGTTAGAGGTTTTAGACCTTGGAATCAATCAAATAACAGATGCCTTTCCTTGCCCGTTGAAGAACATATCCCCCTTGAGTGTCCTTATGTTGCGATCCAACAAATTTTATGGACCTATTGGATGTCCCGGGACCAAAGGCACCTGGCCGAATCTTCAAATCATAGATTTAGCTCATAACAGTTTCAATGGTGAAATACCAAGTACATCATTGGCAACATGGCAGGCAATGATGGTTAATAAAGATGGTTTGGAAACTTACCTTAGCTATGATTATGATGATAAATATGGCGCTTTTGATTACGGGGATACAATAACAACCACCATCAAAGGTTTGGAGTTGGATCTGATAAAGATTCTACCTATCTTCACCTTGATTGATTTCTCTTCCAACAATTTTAGCGGATCAATACCCAAGGAAATAGGCGAACTGAGATCATTATATGTCCTCAATCTGTCAAGTAATGCTTTCACAGGGGAAATCCCATCATCCTTTGGTAACATGAGAAGCATAGAGTCCTTAGACCTCTCACAGAACCACCTGAGCGGCCAAATTCCACCGCAGCTTGCAAATCTGATTTTCCTTTCGTACTTGAATGTCTCATATAATCAACTGACAGGAAGGATCCCAACCAGCACTCAGTTTTCGACATTTCCAAATAACTCCTTCAAGGGTAACAAAGGATTATGGGGGCCTCCTCTGACATCGGATGCAGTAATCGTATCGCCACCTCTGACATTAAATGGAAGCTCAAGTAATCTGAATTCTGGAGATGAGATTGATTGGAATGTTATTAGTGCTGAAATTGGTTTTACATGTGGGTTTGGAATTGCCGTCGGGTCACTTTTGTTTTGCAAGAGATGGAGGAAATGGTATTACAGAGCTATGTTTAAAATCCTGTTCAAGATATTCCCTCAGTTGGAACACAGATTTGGTAATCACAGAAGGCATGTTTACATAAATCAAAGGTATTGGAGCCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1035

Amino Acids

114.24

Weight (kDa)

5.35

Isoelectric Point (pI)

39.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 71 2.5e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 84 - 186 2e-09 Leucine-rich repeat region
LRR_8 PF13855 303 - 362 7.8e-07 Leucine rich repeat
LRR_14 PF23598 306 - 361 3.8e-06 Leucine-rich repeat region
LRR_8 PF13855 853 - 913 6.3e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1469
AccB1I GGYRCC 2 cut(s) 1469, 2264
AccB7I CCANNNNNTGG 1 cut(s) 902
AccBSI CCGCTC 1 cut(s) 2670
AccI GTMKAC 1 cut(s) 1678
AccIII TCCGGA 1 cut(s) 1405
AciI CCGC 6 cut(s) 66, 502, 1484, 2526, 2670, 2684
AcoI YGGCCR 3 cut(s) 1038, 2270, 2671
AcuI CTGAAG 2 cut(s) 290, 1481
AfaI GTAC 7 cut(s) 178, 641, 1067, 1471, 1508, 2329, 2714
AfiI CCNNNNNNNGG 5 cut(s) 902, 1397, 1694, 1744, 3043
AflIII ACRYGT 1 cut(s) 2939
AjnI CCWGG 3 cut(s) 680, 1603, 2267
AjuI GAANNNNNNNTTGG 4 cut(s) 806, 838, 3039, 3071
Alw26I GTCTC 6 cut(s) 290, 785, 1185, 1267, 1643, 2728
AlwNI CAGNNNCTG 1 cut(s) 81
Ama87I CYCGRG 1 cut(s) 2252
Aor13HI TCCGGA 1 cut(s) 1405
AoxI GGCC 7 cut(s) 658, 1038, 1399, 1606, 2270, 2671, 2816
ApeKI GCWGC 6 cut(s) 210, 246, 264, 1201, 1919, 2686
AseI ATTAAT 2 cut(s) 1098, 1359
Asp700I GAANNNNTTC 1 cut(s) 1538
Asp718I GGTACC 1 cut(s) 1469
AspLEI GCGC 1 cut(s) 2417
AspS9I GGNCC 6 cut(s) 659, 731, 1582, 2237, 2256, 2816
AsuC2I CCSGG 3 cut(s) 931, 2253, 2254
AsuHPI GGTGA 6 cut(s) 491, 1473, 1784, 1841, 2327, 2485
AsuII TTCGAA 1 cut(s) 2058
AvaI CYCGRG 1 cut(s) 2252
AvaII GGWCC 4 cut(s) 731, 1582, 2237, 2256
BalI TGGCCA 1 cut(s) 1040
BamHI GGATCC 2 cut(s) 1313, 2748
BanI GGYRCC 2 cut(s) 1469, 2264
BarI GAAGNNNNNNTAC 2 cut(s) 1302, 1334
BbvCI CCTCAGC 2 cut(s) 242, 576
BbvI GCAGC 6 cut(s) 222, 258, 276, 1188, 1931, 2698
BccI CCATC 8 cut(s) 361, 551, 707, 2350, 2363, 2456, 2617, 2979
BceAI ACGGC 2 cut(s) 2942, 3087
BciT130I CCWGG 3 cut(s) 682, 1605, 2269
BciVI GTATCC 1 cut(s) 2425
BcnI CCSGG 3 cut(s) 931, 2253, 2254
BcoDI GTCTC 6 cut(s) 290, 785, 1185, 1267, 1643, 2728
BfaI CTAG 6 cut(s) 471, 920, 1089, 1809, 2066, 2111
BfmI CTRYAG 2 cut(s) 839, 1202
BfoI RGCGCY 1 cut(s) 2418
BfuI GTATCC 1 cut(s) 2425
BglII AGATCT 2 cut(s) 1213, 1417
BisI GCNGC 7 cut(s) 211, 247, 265, 1202, 1920, 2671, 2687
BlsI GCNGC 7 cut(s) 212, 248, 266, 1203, 1921, 2672, 2688
BmcAI AGTACT 1 cut(s) 1508
Bme1390I CCNGG 6 cut(s) 682, 931, 1605, 2253, 2254, 2269
Bme18I GGWCC 4 cut(s) 731, 1582, 2237, 2256
BmeT110I CYCGRG 1 cut(s) 2252
BmgT120I GGNCC 6 cut(s) 659, 731, 1582, 2237, 2256, 2816
BmrFI CCNGG 6 cut(s) 682, 931, 1605, 2253, 2254, 2269
BmrI ACTGGG 1 cut(s) 423
BmsI GCATC 2 cut(s) 2155, 2824
BmuI ACTGGG 1 cut(s) 423
BplI GAGNNNNNCTC 2 cut(s) 242, 274
BpmI CTGGAG 1 cut(s) 2913
Bpu10I CCTNAGC 4 cut(s) 242, 576, 2387, 2666
Bpu14I TTCGAA 1 cut(s) 2058
BpuEI CTTGAG 4 cut(s) 796, 1399, 2221, 2860
BpuMI CCSGG 3 cut(s) 931, 2253, 2254
BsaJI CCNNGG 3 cut(s) 2143, 2252, 2538
BsaWI WCCGGW 2 cut(s) 886, 1405
Bsc4I CCNNNNNNNGG 5 cut(s) 902, 1397, 1694, 1744, 3043
Bse1I ACTGG 2 cut(s) 418, 2023
Bse3DI GCAATG 3 cut(s) 104, 1912, 2358
BseAI TCCGGA 1 cut(s) 1405
BseBI CCWGG 3 cut(s) 682, 1605, 2269
BseDI CCNNGG 3 cut(s) 2143, 2252, 2538
BseGI GGATG 6 cut(s) 60, 718, 1073, 2252, 2612, 2839
BseLI CCNNNNNNNGG 5 cut(s) 902, 1397, 1694, 1744, 3043
BseMI GCAATG 3 cut(s) 104, 1912, 2358
BseNI ACTGG 2 cut(s) 418, 2023
BseRI GAGGAG 3 cut(s) 497, 2017, 2811
BseXI GCAGC 6 cut(s) 222, 258, 276, 1188, 1931, 2698
BseYI CCCAGC 1 cut(s) 93
BsgI GTGCAG 1 cut(s) 1938
BshFI GGCC 7 cut(s) 660, 1040, 1401, 1608, 2272, 2673, 2818
BshNI GGYRCC 2 cut(s) 1469, 2264
BsiHKCI CYCGRG 1 cut(s) 2252
BsiSI CCGG 5 cut(s) 887, 930, 956, 1406, 2253
BslFI GGGAC 5 cut(s) 946, 1127, 1761, 2235, 2269
BslI CCNNNNNNNGG 5 cut(s) 902, 1397, 1694, 1744, 3043
BsmAI GTCTC 6 cut(s) 290, 785, 1185, 1267, 1643, 2728
BsmBI CGTCTC 1 cut(s) 1643
BsmFI GGGAC 5 cut(s) 946, 1127, 1761, 2235, 2269
BsmI GAATGC 1 cut(s) 1010
BsnI GGCC 7 cut(s) 660, 1040, 1401, 1608, 2272, 2673, 2818
BsoBI CYCGRG 1 cut(s) 2252
Bsp119I TTCGAA 1 cut(s) 2058
Bsp13I TCCGGA 1 cut(s) 1405
Bsp1407I TGTACA 1 cut(s) 639
BspACI CCGC 6 cut(s) 66, 502, 1484, 2526, 2670, 2684
BspANI GGCC 7 cut(s) 660, 1040, 1401, 1608, 2272, 2673, 2818
BspEI TCCGGA 1 cut(s) 1405
BspHI TCATGA 1 cut(s) 667
BspMAI CTGCAG 1 cut(s) 1206
BspT104I TTCGAA 1 cut(s) 2058
BspT107I GGYRCC 2 cut(s) 1469, 2264
BsrBI CCGCTC 1 cut(s) 2670
BsrDI GCAATG 3 cut(s) 104, 1912, 2358
BsrGI TGTACA 1 cut(s) 639
BsrI ACTGG 2 cut(s) 418, 2023
BssECI CCNNGG 3 cut(s) 2143, 2252, 2538
BssT1I CCWWGG 2 cut(s) 2143, 2538
Bst2UI CCWGG 3 cut(s) 682, 1605, 2269
Bst4CI ACNGT 4 cut(s) 49, 843, 1576, 2306
Bst6I CTCTTC 4 cut(s) 293, 440, 1270, 2515
BstAUI TGTACA 1 cut(s) 639
BstBI TTCGAA 1 cut(s) 2058
BstC8I GCNNGC 2 cut(s) 2349, 2691
BstF5I GGATG 6 cut(s) 60, 718, 1073, 2252, 2612, 2839
BstH2I RGCGCY 1 cut(s) 2418
BstHHI GCGC 1 cut(s) 2417
BstMAI GTCTC 6 cut(s) 290, 785, 1185, 1267, 1643, 2728
BstNI CCWGG 3 cut(s) 682, 1605, 2269
BstNSI RCATGY 2 cut(s) 2943, 3077
BstSCI CCNGG 6 cut(s) 680, 929, 1603, 2251, 2252, 2267
BstSFI CTRYAG 2 cut(s) 839, 1202
BstV1I GCAGC 6 cut(s) 222, 258, 276, 1188, 1931, 2698
BsuI GTATCC 1 cut(s) 2425
BsuRI GGCC 7 cut(s) 660, 1040, 1401, 1608, 2272, 2673, 2818
BtsCI GGATG 6 cut(s) 60, 718, 1073, 2252, 2612, 2839
BtsIMutI CAGTG 2 cut(s) 45, 790
Cac8I GCNNGC 2 cut(s) 2349, 2691
CaiI CAGNNNCTG 1 cut(s) 81
CciI TCATGA 1 cut(s) 667
CfoI GCGC 1 cut(s) 2417
Cfr13I GGNCC 6 cut(s) 659, 731, 1582, 2237, 2256, 2816
Cfr9I CCCGGG 1 cut(s) 2252
Csp6I GTAC 7 cut(s) 177, 640, 1066, 1470, 1507, 2328, 2713
CspCI CAANNNNNGTGG 4 cut(s) 1363, 1398, 1894, 1929
CviAII CATG 7 cut(s) 165, 261, 668, 2343, 2626, 2940, 3074
CviQI GTAC 7 cut(s) 177, 640, 1066, 1470, 1507, 2328, 2713
DraI TTTAAA 1 cut(s) 3016
EaeI YGGCCR 3 cut(s) 1038, 2270, 2671
Eam1104I CTCTTC 4 cut(s) 293, 440, 1270, 2515
EarI CTCTTC 4 cut(s) 293, 440, 1270, 2515
Eco130I CCWWGG 2 cut(s) 2143, 2538
Eco32I GATATC 1 cut(s) 1354
Eco47I GGWCC 4 cut(s) 731, 1582, 2237, 2256
Eco57I CTGAAG 2 cut(s) 290, 1481
Eco88I CYCGRG 1 cut(s) 2252
EcoO109I RGGNCCY 2 cut(s) 659, 2816
EcoRI GAATTC 2 cut(s) 169, 2887
EcoRII CCWGG 3 cut(s) 680, 1603, 2267
EcoRV GATATC 1 cut(s) 1354
EcoT14I CCWWGG 2 cut(s) 2143, 2538
ErhI CCWWGG 2 cut(s) 2143, 2538
Esp3I CGTCTC 1 cut(s) 1643
FaeI CATG 7 cut(s) 168, 264, 671, 2346, 2629, 2943, 3077
FalI AAGNNNNNCTT 2 cut(s) 2575, 2607
FaqI GGGAC 5 cut(s) 946, 1127, 1761, 2235, 2269
FatI CATG 7 cut(s) 164, 260, 667, 2342, 2625, 2939, 3073
FauI CCCGC 1 cut(s) 73
FblI GTMKAC 1 cut(s) 1678
Fnu4HI GCNGC 7 cut(s) 211, 247, 265, 1202, 1920, 2671, 2687
FokI GGATG 6 cut(s) 47, 725, 1060, 2259, 2599, 2846
Fsp4HI GCNGC 7 cut(s) 211, 247, 265, 1202, 1920, 2671, 2687
FspBI CTAG 6 cut(s) 471, 920, 1089, 1809, 2066, 2111
GlaI GCGC 1 cut(s) 2416
GluI GCNGC 7 cut(s) 211, 247, 265, 1202, 1920, 2671, 2687
GsaI CCCAGC 1 cut(s) 97
GsuI CTGGAG 1 cut(s) 2913
HaeII RGCGCY 1 cut(s) 2418
HaeIII GGCC 7 cut(s) 660, 1040, 1401, 1608, 2272, 2673, 2818
HapII CCGG 5 cut(s) 887, 930, 956, 1406, 2253
HhaI GCGC 1 cut(s) 2417
Hin1II CATG 7 cut(s) 168, 264, 671, 2346, 2629, 2943, 3077
Hin6I GCGC 1 cut(s) 2415
HinP1I GCGC 1 cut(s) 2415
HincII GTYRAC 1 cut(s) 850
HindII GTYRAC 1 cut(s) 850
HindIII AAGCTT 4 cut(s) 155, 368, 763, 1127
HpaII CCGG 5 cut(s) 887, 930, 956, 1406, 2253
HphI GGTGA 6 cut(s) 491, 1473, 1784, 1841, 2327, 2485
Hpy166II GTNNAC 4 cut(s) 565, 850, 1679, 3079
Hpy8I GTNNAC 4 cut(s) 565, 850, 1679, 3079
Hpy99I CGWCG 1 cut(s) 2963
HpyCH4III ACNGT 4 cut(s) 49, 843, 1576, 2306
HpyCH4IV ACGT 1 cut(s) 701
HpySE526I ACGT 1 cut(s) 701
Hsp92II CATG 7 cut(s) 168, 264, 671, 2346, 2629, 2943, 3077
HspAI GCGC 1 cut(s) 2415
Kpn2I TCCGGA 1 cut(s) 1405
KpnI GGTACC 1 cut(s) 1473
LmnI GCTCC 8 cut(s) 114, 401, 591, 803, 1019, 1630, 1690, 3099
Lsp1109I GCAGC 6 cut(s) 222, 258, 276, 1188, 1931, 2698
LweI GCATC 2 cut(s) 2155, 2824
MaeI CTAG 6 cut(s) 471, 920, 1089, 1809, 2066, 2111
MaeII ACGT 1 cut(s) 701
MaeIII GTNAC 7 cut(s) 202, 791, 1661, 1871, 2621, 2798, 2964
MbiI CCGCTC 1 cut(s) 2670
MfeI CAATTG 4 cut(s) 643, 1052, 1618, 2116
MlsI TGGCCA 1 cut(s) 1040
MluNI TGGCCA 1 cut(s) 1040
MlyI GAGTC 7 cut(s) 260, 787, 953, 957, 1418, 1966, 2648
MmeI TCCRAC 8 cut(s) 211, 316, 1101, 1173, 2247, 2445, 2538, 3024
Mox20I TGGCCA 1 cut(s) 1040
MroI TCCGGA 1 cut(s) 1405
MroXI GAANNNNTTC 1 cut(s) 1538
MscI TGGCCA 1 cut(s) 1040
MslI CAYNNNNRTG 1 cut(s) 1322
Msp20I TGGCCA 1 cut(s) 1040
MspA1I CMGCKG 1 cut(s) 575
MspI CCGG 5 cut(s) 887, 930, 956, 1406, 2253
MspR9I CCNGG 6 cut(s) 682, 931, 1605, 2253, 2254, 2269
MunI CAATTG 4 cut(s) 643, 1052, 1618, 2116
Mva1269I GAATGC 1 cut(s) 1010
MvaI CCWGG 3 cut(s) 682, 1605, 2269
NciI CCSGG 3 cut(s) 931, 2253, 2254
NlaIII CATG 7 cut(s) 168, 264, 671, 2346, 2629, 2943, 3077
NmuCI GTSAC 1 cut(s) 2964
NspI RCATGY 2 cut(s) 2943, 3077
NspV TTCGAA 1 cut(s) 2058
PagI TCATGA 1 cut(s) 667
PciI ACATGT 1 cut(s) 2939
PcsI WCGNNNNNNNCGW 2 cut(s) 327, 1146
PctI GAATGC 1 cut(s) 1010
PdmI GAANNNNTTC 1 cut(s) 1538
PflMI CCANNNNNTGG 1 cut(s) 902
PfoI TCCNGGA 1 cut(s) 929
PkrI GCNGC 7 cut(s) 212, 248, 266, 1203, 1921, 2672, 2688
PleI GAGTC 7 cut(s) 259, 786, 953, 956, 1417, 1966, 2647
PpsI GAGTC 7 cut(s) 259, 786, 953, 956, 1417, 1966, 2647
PscI ACATGT 1 cut(s) 2939
PshBI ATTAAT 2 cut(s) 1098, 1359
Psp6I CCWGG 3 cut(s) 680, 1603, 2267
PspFI CCCAGC 1 cut(s) 93
PspGI CCWGG 3 cut(s) 680, 1603, 2267
PspPI GGNCC 6 cut(s) 659, 731, 1582, 2237, 2256, 2816
PstI CTGCAG 1 cut(s) 1206
PstNI CAGNNNCTG 1 cut(s) 81
PvuII CAGCTG 1 cut(s) 575
RsaI GTAC 7 cut(s) 178, 641, 1067, 1471, 1508, 2329, 2714
RsaNI GTAC 7 cut(s) 177, 640, 1066, 1470, 1507, 2328, 2713
RseI CAYNNNNRTG 1 cut(s) 1322
SatI GCNGC 7 cut(s) 211, 247, 265, 1202, 1920, 2671, 2687
Sau96I GGNCC 6 cut(s) 659, 731, 1582, 2237, 2256, 2816
ScaI AGTACT 1 cut(s) 1508
SchI GAGTC 7 cut(s) 260, 787, 953, 957, 1418, 1966, 2648
ScrFI CCNGG 6 cut(s) 682, 931, 1605, 2253, 2254, 2269
SfaNI GCATC 2 cut(s) 2155, 2824
SfcI CTRYAG 2 cut(s) 839, 1202
SfuI TTCGAA 1 cut(s) 2058
SinI GGWCC 4 cut(s) 731, 1582, 2237, 2256
SmaI CCCGGG 1 cut(s) 2254
SmiMI CAYNNNNRTG 1 cut(s) 1322
SmlI CTYRAG 4 cut(s) 775, 1378, 2200, 2875
SmoI CTYRAG 4 cut(s) 775, 1378, 2200, 2875
SsiI CCGC 6 cut(s) 66, 502, 1484, 2526, 2670, 2684
SspI AATATT 2 cut(s) 708, 1778
SspMI CTAG 6 cut(s) 471, 920, 1089, 1809, 2066, 2111
StyD4I CCNGG 6 cut(s) 680, 929, 1603, 2251, 2252, 2267
StyI CCWWGG 2 cut(s) 2143, 2538
TaaI ACNGT 4 cut(s) 49, 843, 1576, 2306
TaiI ACGT 1 cut(s) 704
TaqI TCGA 6 cut(s) 173, 912, 1140, 1412, 2058, 2771
TatI WGTACW 4 cut(s) 639, 1065, 1506, 2327
TauI GCSGC 1 cut(s) 2673
TscAI CASTG 2 cut(s) 52, 790
TseFI GTSAC 1 cut(s) 2964
TseI GCWGC 6 cut(s) 210, 246, 264, 1201, 1919, 2686
Tsp45I GTSAC 1 cut(s) 2964
TspDTI ATGAA 3 cut(s) 656, 684, 1825
TspMI CCCGGG 1 cut(s) 2252
TspRI CASTG 2 cut(s) 52, 790
Van91I CCANNNNNTGG 1 cut(s) 902
VpaK11BI GGWCC 4 cut(s) 731, 1582, 2237, 2256
VspI ATTAAT 2 cut(s) 1098, 1359
XbaI TCTAGA 1 cut(s) 470
XceI RCATGY 2 cut(s) 2943, 3077
XcmI CCANNNNNNNNNTGG 2 cut(s) 706, 2455
XmaI CCCGGG 1 cut(s) 2252
XmiI GTMKAC 1 cut(s) 1678
XmnI GAANNNNTTC 1 cut(s) 1538
XspI CTAG 6 cut(s) 471, 920, 1089, 1809, 2066, 2111
ZrmI AGTACT 1 cut(s) 1508
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.