RLG00000022912

receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Reverse (-)
14963218 .. 14966933
3716 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000022912

Sequence Viewer

Length: 2256 bp
ATGCCAACTCTGTTCCTCCATTTCTTCCTCTTCTTATTCACTACCACTGTTACTAACCTCATCCCCGCAGTTCACAGCAACTGTATTGAAGCCCAGCAACAATCATTGCTCCATTTTAAGCAAAGTCTTGAATTTGATTCTTCTGAATCCTCCAAGCTTATCACATGGAATTCGAGTATCGATTGCTATTCTTGGCTCGGTGTAACCTTCAACACTAATGGGAGTGTTGTTGGTCTTGACATCAACAGCGAGTCTATCTCATGCCCTATATGTCACTCCCTTGCAAAGCTTCAATATCTGTATGATATTGACTTGTCACTTAACTCCTTCTATGCTCTGGTTCCAAGAGTCTTTGCCAGTTTTTCAAACTTGACCTACTTAAGTCTTCGTTATTCTAACTTGCTCGGAACATTTCTCAAGGAGATCTTTCAGATACCTTCCCTTCAAACCATTGACCTTTCTGGTGACCTACCCAACTCTATTAGAAATCTTAAGATGCTGTCAAGAATAGATATTTCAAATTGCAAGTTCACCGGATCAATTCCCAAGTCGATTGAAAACCTCACAGAATTGGCTGACCTGGACATCAACTCCTTAGTGTCTCTAGAAGATCCTCTTCCTAATTCCATTTCTACTTTATCTTCTCTGGACCTTCATTCCAATAAACTTCTAGATATCCAATCTTCATATTCCTTCCTTCAGCTTGGTCACTTAGGATTAGCTTCTAACAAGCTGACAACATTCCCAGACTTCTTGAGAAATCAATCCTATCTAACCTACTTGGACATCTCAGACAACCAGATTCTAGGACAGATACCCAATTGGATTTGGAGTTTCGAACTTCAAGAACTAAATCTTTCTTGTAACTTCTTGGAAAGGTTTGAAGCTCCTCTACCTAATTTTACCTATGTTCTATCTTCGGTTGATCTTCATTCAAACCAGCTTCAGGGATGTTTCCCCTTGTTCTTAAGTAGTAGTTATCTAGATTTTTCAAGAAATAATTTCAGCTCTAGTATACCGACCGACATTAGTTACTACATTTTGACTCAGTCTTACCTCTCTCTTTCAAGCAATAACTTCCACGGGGCCATTCCAGAATCAATATGCATTGCAGAGGGTAAGGTTCTTGATCTGTATGATAATTCTTTGAGTGGAAACATTCCCCAATGCTTGACTCAATTACGTCGGCTTTCAGTCATTGATTTGAAGAGAAACAACCTGAGTGGCACTATTCCCAATAATTATCTTAGCCGTTGTGAGCTACAAACTCTAGACCTCAATAACAATCAGATACAAGGCCAGTTTCCGAAATCTCTTGTCAACTGCTCAAGTTGTATGGAAACATTGGATGTCCTAAGACCAATGGCACATGGCCTGTGCTTCAAAATAATAGATTTAGCTCACAACAATTTCAATGGTGATATGCTGGGAAGATTGTCTCTGACATGGCAAGCCATGTTGTCTAATGAAGATGATTCTCCAACTAACCTTGGATTTTCTTATCAGCCGGGCAAGAGTAATAGATATAATAATAAGTATAATAGAGATTATTATTCGTATAGTGGAGAAACAGGTGCTGACGTTTATTATAGAGATGCAATTACGACTATCATCAAAGGTTTAGAATTGTATGTGGTTAAGATTCTAACTATATTCACCTTGATTGACTACTCCTCCAACAAATTCAACGGATCAATACCTGAGGAAATCGGAGAGTTGAAATCACTACATGTCCTCAACTTATCAGTTAATGCTTTCACTGGAAAAATACCATCATCATTTGGCAAGATGCGACAACTGGAGTCCTTAGATCTCTCAAAGAACCACTTAAGCGGCCAAATTCCCCCACATTTTGTAAATCTCACTTTCCTTGCGTTCTTGGATCTCTCAAATAATGAACTGGTCGGGAAGATCCCAAGCAACACTCAAATTTCAACATTTCCAAATGCCTCTGTCGAAGGTAACAAAGGATTATGGGGGCCTCCGTTGACAATGGATGCAGTATTGCCGCTCCCAATTGCAGATGGAAGCTCAAATAATCCGAATTTTGGAGATGAGATTGATTGGGCTGTTATCTGTTTTGAAATTGGATTTACATGTGGGTTTGGAATTGCCATCGGGTCAATTTTGTTTTGCAAAAGATGGAGGAAATGGTATTACAGAGCTATGCGTAGTATTCTTTTCAAGATATTCCCTCAACTGGAGCAGAGATTTGGTAATCATAGAAGACACGTCTACATAAACACAAGGCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

752

Amino Acids

84.64

Weight (kDa)

5.61

Isoelectric Point (pI)

38.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 100 - 156 5.3e-06 Leucine rich repeat
LRR_14 PF23598 120 - 287 9.3e-07 Leucine-rich repeat region
LRR_14 PF23598 565 - 630 7.7e-07 Leucine-rich repeat region
LRR_8 PF13855 575 - 634 1.1e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 2011
AccI GTMKAC 2 cut(s) 1015, 2235
AciI CCGC 3 cut(s) 66, 1833, 2009
AclWI GGATC 5 cut(s) 544, 605, 1699, 1890, 1906
AcoI YGGCCR 1 cut(s) 1834
AcsI RAATTY 6 cut(s) 131, 169, 1682, 1839, 1929, 2044
AcuI CTGAAG 2 cut(s) 683, 929
AfiI CCNNNNNNNGG 3 cut(s) 946, 2048, 2200
AflII CTTAAG 4 cut(s) 379, 491, 967, 1828
AflIII ACRYGT 3 cut(s) 1729, 2096, 2230
AjiI CACGTC 1 cut(s) 2233
AjnI CCWGG 1 cut(s) 579
Alw26I GTCTC 2 cut(s) 606, 1443
AlwI GGATC 5 cut(s) 544, 605, 1699, 1890, 1906
AlwNI CAGNNNCTG 2 cut(s) 81, 1577
AoxI GGCC 5 cut(s) 1086, 1297, 1372, 1834, 1979
ApoI RAATTY 6 cut(s) 131, 169, 1682, 1839, 1929, 2044
AspS9I GGNCC 3 cut(s) 649, 1086, 1979
AsuC2I CCSGG 1 cut(s) 1509
AsuHPI GGTGA 4 cut(s) 476, 523, 1430, 1648
AsuII TTCGAA 1 cut(s) 837
AvaII GGWCC 1 cut(s) 649
AxyI CCTNAGG 1 cut(s) 1701
BarI GAAGNNNNNNTAC 2 cut(s) 876, 908
BbsI GAAGAC 2 cut(s) 377, 2233
BccI CCATC 4 cut(s) 1780, 2018, 2123, 2136
BceAI ACGGC 1 cut(s) 1236
BciT130I CCWGG 1 cut(s) 581
BcnI CCSGG 1 cut(s) 1509
BcoDI GTCTC 2 cut(s) 606, 1443
BfaI CTAG 6 cut(s) 605, 671, 806, 983, 1011, 1271
BfrI CTTAAG 4 cut(s) 379, 491, 967, 1828
BglII AGATCT 2 cut(s) 423, 1810
BisI GCNGC 2 cut(s) 1834, 2009
BlsI GCNGC 2 cut(s) 1835, 2010
Bme1390I CCNGG 2 cut(s) 581, 1509
Bme18I GGWCC 1 cut(s) 649
BmgBI CACGTC 1 cut(s) 2233
BmgT120I GGNCC 3 cut(s) 649, 1086, 1979
BmiI GGNNCC 3 cut(s) 342, 1087, 1980
BmrFI CCNGG 2 cut(s) 581, 1509
BmsI GCATC 4 cut(s) 486, 1585, 1779, 1987
BpiI GAAGAC 2 cut(s) 377, 2233
BplI GAGNNNNNCTC 2 cut(s) 242, 274
BpmI CTGGAG 2 cut(s) 1820, 2222
Bpu14I TTCGAA 1 cut(s) 837
BpuEI CTTGAG 3 cut(s) 401, 775, 1312
BpuMI CCSGG 1 cut(s) 1509
Bsa29I ATCGAT 1 cut(s) 180
BsaJI CCNNGG 2 cut(s) 1081, 1489
BsaWI WCCGGW 1 cut(s) 533
BsaXI ACNNNNNCTCC 4 cut(s) 575, 605, 1658, 1688
Bsc4I CCNNNNNNNGG 3 cut(s) 946, 2048, 2200
Bse1I ACTGG 6 cut(s) 357, 1300, 1765, 1803, 1905, 2205
Bse21I CCTNAGG 1 cut(s) 1701
Bse3DI GCAATG 2 cut(s) 104, 1107
BseBI CCWGG 1 cut(s) 581
BseCI ATCGAT 1 cut(s) 180
BseDI CCNNGG 2 cut(s) 1081, 1489
BseGI GGATG 4 cut(s) 60, 956, 1354, 2002
BseLI CCNNNNNNNGG 3 cut(s) 946, 2048, 2200
BseMI GCAATG 2 cut(s) 104, 1107
BseMII CTCAG 4 cut(s) 804, 1061, 1211, 1692
BseNI ACTGG 6 cut(s) 357, 1300, 1765, 1803, 1905, 2205
BseRI GAGGAG 2 cut(s) 879, 1663
BseYI CCCAGC 2 cut(s) 93, 1426
Bsh1285I CGRYCG 1 cut(s) 1023
BshFI GGCC 5 cut(s) 1088, 1299, 1374, 1836, 1981
BshVI ATCGAT 1 cut(s) 180
BsiEI CGRYCG 1 cut(s) 1023
BsiSI CCGG 2 cut(s) 534, 1508
BslI CCNNNNNNNGG 3 cut(s) 946, 2048, 2200
BsmAI GTCTC 2 cut(s) 606, 1443
BsnI GGCC 5 cut(s) 1088, 1299, 1374, 1836, 1981
Bsp119I TTCGAA 1 cut(s) 837
Bsp143I GATC 9 cut(s) 423, 536, 610, 925, 1129, 1691, 1810, 1882, 1911
BspACI CCGC 3 cut(s) 66, 1833, 2009
BspANI GGCC 5 cut(s) 1088, 1299, 1374, 1836, 1981
BspCNI CTCAG 4 cut(s) 803, 1060, 1212, 1693
BspDI ATCGAT 1 cut(s) 180
BspLI GGNNCC 3 cut(s) 342, 1087, 1980
BspPI GGATC 5 cut(s) 544, 605, 1699, 1890, 1906
BspT104I TTCGAA 1 cut(s) 837
BspTI CTTAAG 4 cut(s) 379, 491, 967, 1828
BsrBI CCGCTC 1 cut(s) 2011
BsrDI GCAATG 2 cut(s) 104, 1107
BsrI ACTGG 6 cut(s) 357, 1300, 1765, 1803, 1905, 2205
BssECI CCNNGG 2 cut(s) 1081, 1489
BssMI GATC 9 cut(s) 423, 536, 610, 925, 1129, 1691, 1810, 1882, 1911
BssNAI GTATAC 1 cut(s) 1016
BssT1I CCWWGG 1 cut(s) 1489
Bst1107I GTATAC 1 cut(s) 1016
Bst2UI CCWGG 1 cut(s) 581
Bst4CI ACNGT 2 cut(s) 49, 83
Bst6I CTCTTC 3 cut(s) 35, 621, 1202
BstAFI CTTAAG 4 cut(s) 379, 491, 967, 1828
BstBI TTCGAA 1 cut(s) 837
BstC8I GCNNGC 1 cut(s) 1452
BstDEI CTNAG 9 cut(s) 595, 712, 790, 1047, 1220, 1247, 1355, 1701, 1807
BstDSI CCRYGG 1 cut(s) 1081
BstEII GGTNACC 1 cut(s) 464
BstF5I GGATG 4 cut(s) 60, 956, 1354, 2002
BstKTI GATC 9 cut(s) 426, 539, 613, 928, 1132, 1694, 1813, 1885, 1914
BstMAI GTCTC 2 cut(s) 606, 1443
BstMBI GATC 9 cut(s) 423, 536, 610, 925, 1129, 1691, 1810, 1882, 1911
BstMCI CGRYCG 1 cut(s) 1023
BstNI CCWGG 1 cut(s) 581
BstNSI RCATGY 2 cut(s) 1733, 2100
BstPI GGTNACC 1 cut(s) 464
BstSCI CCNGG 2 cut(s) 579, 1507
BstV2I GAAGAC 2 cut(s) 377, 2233
BstX2I RGATCY 5 cut(s) 423, 610, 1810, 1882, 1911
BstYI RGATCY 5 cut(s) 423, 610, 1810, 1882, 1911
BstZ17I GTATAC 1 cut(s) 1016
Bsu15I ATCGAT 1 cut(s) 180
Bsu36I CCTNAGG 1 cut(s) 1701
BsuRI GGCC 5 cut(s) 1088, 1299, 1374, 1836, 1981
BsuTUI ATCGAT 1 cut(s) 180
BtgI CCRYGG 1 cut(s) 1081
BtrI CACGTC 1 cut(s) 2233
BtsCI GGATG 4 cut(s) 60, 956, 1354, 2002
BtsIMutI CAGTG 2 cut(s) 45, 1758
Cac8I GCNNGC 1 cut(s) 1452
CaiI CAGNNNCTG 2 cut(s) 81, 1577
Cfr13I GGNCC 3 cut(s) 649, 1086, 1979
ClaI ATCGAT 1 cut(s) 180
CspCI CAANNNNNGTGG 2 cut(s) 1204, 1239
CviAII CATG 7 cut(s) 165, 261, 1370, 1446, 1456, 1730, 2097
DdeI CTNAG 9 cut(s) 595, 712, 790, 1047, 1220, 1247, 1355, 1701, 1807
DpnI GATC 9 cut(s) 425, 538, 612, 927, 1131, 1693, 1812, 1884, 1913
DpnII GATC 9 cut(s) 423, 536, 610, 925, 1129, 1691, 1810, 1882, 1911
EaeI YGGCCR 1 cut(s) 1834
Eam1104I CTCTTC 3 cut(s) 35, 621, 1202
EarI CTCTTC 3 cut(s) 35, 621, 1202
Eco130I CCWWGG 1 cut(s) 1489
Eco32I GATATC 1 cut(s) 676
Eco47I GGWCC 1 cut(s) 649
Eco57I CTGAAG 2 cut(s) 683, 929
Eco81I CCTNAGG 1 cut(s) 1701
Eco91I GGTNACC 1 cut(s) 464
EcoO109I RGGNCCY 1 cut(s) 1979
EcoO65I GGTNACC 1 cut(s) 464
EcoRI GAATTC 1 cut(s) 169
EcoRII CCWGG 1 cut(s) 579
EcoRV GATATC 1 cut(s) 676
EcoT14I CCWWGG 1 cut(s) 1489
EcoT22I ATGCAT 1 cut(s) 1109
ErhI CCWWGG 1 cut(s) 1489
FaeI CATG 7 cut(s) 168, 264, 1373, 1449, 1459, 1733, 2100
FalI AAGNNNNNCTT 6 cut(s) 410, 442, 600, 632, 1811, 1843
FatI CATG 7 cut(s) 164, 260, 1369, 1445, 1455, 1729, 2096
FauI CCCGC 1 cut(s) 73
FblI GTMKAC 2 cut(s) 1015, 2235
Fnu4HI GCNGC 2 cut(s) 1834, 2009
FokI GGATG 4 cut(s) 47, 963, 1361, 2009
Fsp4HI GCNGC 2 cut(s) 1834, 2009
FspBI CTAG 6 cut(s) 605, 671, 806, 983, 1011, 1271
GluI GCNGC 2 cut(s) 1834, 2009
GsaI CCCAGC 2 cut(s) 97, 1430
GsuI CTGGAG 2 cut(s) 1820, 2222
HaeIII GGCC 5 cut(s) 1088, 1299, 1374, 1836, 1981
HapII CCGG 2 cut(s) 534, 1508
Hin1II CATG 7 cut(s) 168, 264, 1373, 1449, 1459, 1733, 2100
HincII GTYRAC 2 cut(s) 1321, 1989
HindII GTYRAC 2 cut(s) 1321, 1989
HindIII AAGCTT 2 cut(s) 155, 287
HpaII CCGG 2 cut(s) 534, 1508
HphI GGTGA 4 cut(s) 476, 523, 1430, 1648
Hpy166II GTNNAC 6 cut(s) 73, 531, 1016, 1321, 1989, 2236
Hpy188I TCNGA 9 cut(s) 145, 407, 432, 793, 1290, 1308, 1443, 1712, 2043
Hpy8I GTNNAC 6 cut(s) 73, 531, 1016, 1321, 1989, 2236
Hpy99I CGWCG 1 cut(s) 1188
HpyAV CCTTC 8 cut(s) 217, 337, 447, 452, 662, 703, 707, 1952
HpyCH4III ACNGT 2 cut(s) 49, 83
HpyCH4IV ACGT 3 cut(s) 1183, 1581, 2232
HpyCH4V TGCA 8 cut(s) 284, 525, 1107, 1112, 1598, 2000, 2021, 2136
HpyF3I CTNAG 9 cut(s) 595, 712, 790, 1047, 1220, 1247, 1355, 1701, 1807
HpySE526I ACGT 3 cut(s) 1183, 1581, 2232
Hsp92II CATG 7 cut(s) 168, 264, 1373, 1449, 1459, 1733, 2100
Kzo9I GATC 9 cut(s) 423, 536, 610, 925, 1129, 1691, 1810, 1882, 1911
LmnI GCTCC 4 cut(s) 114, 892, 2016, 2203
LweI GCATC 4 cut(s) 486, 1585, 1779, 1987
MaeI CTAG 6 cut(s) 605, 671, 806, 983, 1011, 1271
MaeII ACGT 3 cut(s) 1183, 1581, 2232
MaeIII GTNAC 9 cut(s) 49, 202, 272, 315, 464, 707, 863, 1031, 1961
MalI GATC 9 cut(s) 425, 538, 612, 927, 1131, 1693, 1812, 1884, 1913
MbiI CCGCTC 1 cut(s) 2011
MboI GATC 9 cut(s) 423, 536, 610, 925, 1129, 1691, 1810, 1882, 1911
MfeI CAATTG 2 cut(s) 820, 2016
MflI RGATCY 5 cut(s) 423, 610, 1810, 1882, 1911
MlyI GAGTC 5 cut(s) 260, 357, 1039, 1168, 1811
MmeI TCCRAC 2 cut(s) 1505, 1701
Mph1103I ATGCAT 1 cut(s) 1109
MseI TTAA 8 cut(s) 117, 321, 380, 492, 968, 1638, 1749, 1829
MspCI CTTAAG 4 cut(s) 379, 491, 967, 1828
MspI CCGG 2 cut(s) 534, 1508
MspR9I CCNGG 2 cut(s) 581, 1509
MunI CAATTG 2 cut(s) 820, 2016
MvaI CCWGG 1 cut(s) 581
NciI CCSGG 1 cut(s) 1509
NdeII GATC 9 cut(s) 423, 536, 610, 925, 1129, 1691, 1810, 1882, 1911
NlaIII CATG 7 cut(s) 168, 264, 1373, 1449, 1459, 1733, 2100
NlaIV GGNNCC 3 cut(s) 342, 1087, 1980
NmuCI GTSAC 4 cut(s) 272, 315, 464, 707
NsiI ATGCAT 1 cut(s) 1109
NspI RCATGY 2 cut(s) 1733, 2100
NspV TTCGAA 1 cut(s) 837
PciI ACATGT 2 cut(s) 1729, 2096
PfeI GAWTC 6 cut(s) 137, 146, 802, 1097, 1475, 1642
PflFI GACNNNGTC 1 cut(s) 1048
PkrI GCNGC 2 cut(s) 1835, 2010
PleI GAGTC 5 cut(s) 259, 356, 1039, 1168, 1810
PpsI GAGTC 5 cut(s) 259, 356, 1039, 1168, 1810
PscI ACATGT 2 cut(s) 1729, 2096
Psp6I CCWGG 1 cut(s) 579
PspEI GGTNACC 1 cut(s) 464
PspFI CCCAGC 2 cut(s) 93, 1426
PspGI CCWGG 1 cut(s) 579
PspN4I GGNNCC 3 cut(s) 342, 1087, 1980
PspPI GGNCC 3 cut(s) 649, 1086, 1979
PstNI CAGNNNCTG 2 cut(s) 81, 1577
PsuI RGATCY 5 cut(s) 423, 610, 1810, 1882, 1911
PsyI GACNNNGTC 1 cut(s) 1048
SaqAI TTAA 8 cut(s) 117, 321, 380, 492, 968, 1638, 1749, 1829
SatI GCNGC 2 cut(s) 1834, 2009
Sau3AI GATC 9 cut(s) 423, 536, 610, 925, 1129, 1691, 1810, 1882, 1911
Sau96I GGNCC 3 cut(s) 649, 1086, 1979
SchI GAGTC 5 cut(s) 260, 357, 1039, 1168, 1811
ScrFI CCNGG 2 cut(s) 581, 1509
SfaNI GCATC 4 cut(s) 486, 1585, 1779, 1987
SfuI TTCGAA 1 cut(s) 837
SinI GGWCC 1 cut(s) 649
SmlI CTYRAG 7 cut(s) 379, 416, 491, 754, 967, 1327, 1828
SmoI CTYRAG 7 cut(s) 379, 416, 491, 754, 967, 1327, 1828
SsiI CCGC 3 cut(s) 66, 1833, 2009
SspMI CTAG 6 cut(s) 605, 671, 806, 983, 1011, 1271
StyD4I CCNGG 2 cut(s) 579, 1507
StyI CCWWGG 1 cut(s) 1489
TaaI ACNGT 2 cut(s) 49, 83
TaiI ACGT 3 cut(s) 1186, 1584, 2235
TaqI TCGA 5 cut(s) 173, 180, 551, 837, 1956
TaqII GACCGA 1 cut(s) 1037
TauI GCSGC 2 cut(s) 1836, 2011
TfiI GAWTC 6 cut(s) 137, 146, 802, 1097, 1475, 1642
Tru1I TTAA 8 cut(s) 117, 321, 380, 492, 968, 1638, 1749, 1829
Tru9I TTAA 8 cut(s) 117, 321, 380, 492, 968, 1638, 1749, 1829
TscAI CASTG 2 cut(s) 52, 1765
TseFI GTSAC 4 cut(s) 272, 315, 464, 707
Tsp45I GTSAC 4 cut(s) 272, 315, 464, 707
TspDTI ATGAA 5 cut(s) 644, 675, 920, 1482, 1911
TspGWI ACGGA 2 cut(s) 1704, 1974
TspRI CASTG 2 cut(s) 52, 1765
Tth111I GACNNNGTC 1 cut(s) 1048
Vha464I CTTAAG 4 cut(s) 379, 491, 967, 1828
VpaK11BI GGWCC 1 cut(s) 649
XapI RAATTY 6 cut(s) 131, 169, 1682, 1839, 1929, 2044
XbaI TCTAGA 4 cut(s) 604, 670, 982, 1270
XceI RCATGY 2 cut(s) 1733, 2100
XmiI GTMKAC 2 cut(s) 1015, 2235
XspI CTAG 6 cut(s) 605, 671, 806, 983, 1011, 1271
Zsp2I ATGCAT 1 cut(s) 1109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.