Rh3CG243700

receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
Physical Location & Seq
Forward (+)
23353376 .. 23368500
15125 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG243700.1

Sequence Viewer

Length: 1443 bp
ATGGGCGTGTTGTCAGACTTGACCTCAGCGGAGAGTATTTCTTTAGCAGCATTGACAATTCAAGCACTTCATGGTTCCTTACCGGAGTTTCTGAAGAATGGATCTCTCGAATCCCTAGTTCTATCCCAAACTAAATTTTCAGGAGTCTTGCCGGACTCTATTGGCAACCTTAAAAAGCTGTCTGAATTAGATCTTTCAGAGTGCAATTTCACAGGAGCAGTTCCAAAGTCACTAGAAAACCTAACACAATTGGGGGATTTGGCCTTGTCATACAACAAGTTTTCTGGTCCGATTAATTCCATTCAATGGGAAAAACTCATCAAGCTTGACAGTCTCGACTTGGCTAACAATCTACTCTACGGGAGTATTCCATTGTCTCCCTTTTCTATTCCCTTGCTGCAGAGGTTAGATCTTTCTGGAAATAACTTCTCTGGTCAATTGCTTGAATTTTCTAATGTCTCTTCGTACTTGCTAGAAGAACTTGATTTGAGTAGCAACAATTTGGAAGGATCAATACCCGTGTCTATCTTTAATCTTCCAGGGCTTCAGGAGTTTAATCTTTCTTCAAACTACTTGAGTGGTTTTCCTTTTTATGGCCTTCCGGAGTCGAGAAATCTTTCTTCTCTTGATCTATCCTTCAATAGCTTGTTGTTCAATCATAATGGTACCAACTCATCACTGCACTCCCCCCAGATACGGATGCTGAATTTGGCTTCTAACAAGTTGAAAACATTCCCAAGTTTCCTGAAATATCAATCTTATTTAACCGAATTGGACCTTTCAGACAACCAGATTCCAGGTCAGATACCCAATTGGATTTGGGAGCTTCCTCTGATCAATACTCTAAATCTAAGTTGTAACAAGTTGGTAAGTCTAGAAGCTCCTTTACTTGGTTCTACTTCTACTTACAATCTGGAGAAACTTTATCTTCACTCAAACCAGATTCAGGGACAAATACCATTGTTTGTAAGTGGTAGTTATTTGGATTACTCAGGAAATAATTTCAGCTCTAGTATGCCAATTGACATTGATAAAATCACCAATTCCACGGGCTACCTTGCTCTTTCAAGCAGTAACTTGTATGGGGAAATTCCAAAATCAATATGCAGTGCAAGTAATGCAATGATGGTTAATGAAGACGGTGACGAAATTGATCATATCTATGAGTGGCCACCACCAGTTGCTCAAGGTGCGCTCAATCAAGGACCTAAAAATGGCTCAACATATAGTCGAAGTGCGATAATTCCTGAGAGCACCTCACTAGGTAGTCGACGTGCGATAATTCCTGAGATCAATCCTAAAGAGATCTCTATTTATTATGGAGATGCAATAACAACTACAAGCAAAGGTCGAGAGATGGATCTTGTTAGTGATGAGAGGCAATGCCGACTTCTAGTGAAACTGCAACTTGCTCAAGAGCCCAAAACCGCCGGGAAGCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

480

Amino Acids

52.51

Weight (kDa)

4.76

Isoelectric Point (pI)

35.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 35 - 94 9.2e-07 Leucine rich repeat
LRR_8 PF13855 158 - 216 2.5e-07 Leucine rich repeat
LRR_8 PF13855 230 - 289 9.8e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 665
AccB1I GGYRCC 1 cut(s) 665
AccB7I CCANNNNNTGG 1 cut(s) 306
AccI GTMKAC 1 cut(s) 1270
AccIII TCCGGA 1 cut(s) 601
AciI CCGC 2 cut(s) 29, 1428
AclWI GGATC 3 cut(s) 109, 517, 1368
AcoI YGGCCR 1 cut(s) 1169
AcsI RAATTY 4 cut(s) 134, 446, 706, 1089
AcuI CTGAAG 2 cut(s) 113, 530
AfaI GTAC 2 cut(s) 467, 667
AfiI CCNNNNNNNGG 6 cut(s) 306, 593, 696, 890, 946, 1214
AgsI TTSAA 8 cut(s) 62, 305, 446, 567, 640, 655, 727, 1068
AjiI CACGTC 1 cut(s) 1274
AjnI CCWGG 2 cut(s) 538, 796
AluBI AGCT 6 cut(s) 178, 325, 645, 826, 881, 1008
AluI AGCT 6 cut(s) 178, 325, 645, 826, 881, 1008
Alw21I GWGCWC 1 cut(s) 1256
Alw26I GTCTC 3 cut(s) 338, 381, 463
AlwI GGATC 3 cut(s) 109, 517, 1368
Aor13HI TCCGGA 1 cut(s) 601
AoxI GGCC 3 cut(s) 261, 595, 1169
ApeKI GCWGC 2 cut(s) 47, 397
ApoI RAATTY 4 cut(s) 134, 446, 706, 1089
AseI ATTAAT 1 cut(s) 294
Asp700I GAANNNNTTC 2 cut(s) 616, 731
Asp718I GGTACC 1 cut(s) 665
AspLEI GCGC 1 cut(s) 1195
AspS9I GGNCC 3 cut(s) 287, 775, 1205
AsuC2I CCSGG 1 cut(s) 1432
AsuHPI GGTGA 2 cut(s) 1030, 1154
AvaII GGWCC 3 cut(s) 287, 775, 1205
BalI TGGCCA 1 cut(s) 1171
BanI GGYRCC 1 cut(s) 665
BanII GRGCYC 1 cut(s) 1422
BarI GAAGNNNNNNTAC 4 cut(s) 498, 530, 870, 902
BbsI GAAGAC 1 cut(s) 1143
Bbv12I GWGCWC 1 cut(s) 1256
BbvCI CCTCAGC 1 cut(s) 25
BbvI GCAGC 2 cut(s) 59, 384
BccI CCATC 2 cut(s) 1120, 1351
BciT130I CCWGG 2 cut(s) 540, 798
BclI TGATCA 2 cut(s) 834, 1153
BcnI CCSGG 1 cut(s) 1432
BcoDI GTCTC 3 cut(s) 338, 381, 463
BfaI CTAG 7 cut(s) 116, 233, 473, 875, 1011, 1262, 1394
BfmI CTRYAG 1 cut(s) 398
BglII AGATCT 3 cut(s) 190, 409, 1305
BisI GCNGC 2 cut(s) 48, 398
BlsI GCNGC 2 cut(s) 49, 399
Bme1390I CCNGG 3 cut(s) 540, 798, 1432
Bme18I GGWCC 3 cut(s) 287, 775, 1205
BmgBI CACGTC 1 cut(s) 1274
BmgT120I GGNCC 3 cut(s) 287, 775, 1205
BmiI GGNNCC 2 cut(s) 76, 667
BmrFI CCNGG 3 cut(s) 540, 798, 1432
BmsI GCATC 2 cut(s) 690, 1315
BpiI GAAGAC 1 cut(s) 1143
BplI GAGNNNNNCTC 2 cut(s) 1241, 1273
BpmI CTGGAG 1 cut(s) 935
Bpu10I CCTNAGC 1 cut(s) 25
BpuEI CTTGAG 3 cut(s) 595, 1170, 1398
BpuMI CCSGG 1 cut(s) 1432
BsaJI CCNNGG 2 cut(s) 539, 1047
BsaWI WCCGGW 2 cut(s) 82, 601
Bsc4I CCNNNNNNNGG 6 cut(s) 306, 593, 696, 890, 946, 1214
Bse1I ACTGG 1 cut(s) 1178
Bse3DI GCAATG 2 cut(s) 1128, 1388
BseAI TCCGGA 1 cut(s) 601
BseBI CCWGG 2 cut(s) 540, 798
BseDI CCNNGG 2 cut(s) 539, 1047
BseGI GGATG 1 cut(s) 705
BseLI CCNNNNNNNGG 6 cut(s) 306, 593, 696, 890, 946, 1214
BseMI GCAATG 2 cut(s) 1128, 1388
BseMII CTCAG 4 cut(s) 39, 1005, 1239, 1278
BseNI ACTGG 1 cut(s) 1178
BseXI GCAGC 2 cut(s) 59, 384
BsgI GTGCAG 1 cut(s) 665
BshFI GGCC 3 cut(s) 263, 597, 1171
BshNI GGYRCC 1 cut(s) 665
BsiHKAI GWGCWC 1 cut(s) 1256
BsiSI CCGG 4 cut(s) 83, 152, 602, 1431
BslFI GGGAC 1 cut(s) 963
BslI CCNNNNNNNGG 6 cut(s) 306, 593, 696, 890, 946, 1214
BsmAI GTCTC 3 cut(s) 338, 381, 463
BsmFI GGGAC 1 cut(s) 963
BsnI GGCC 3 cut(s) 263, 597, 1171
Bsp1286I GDGCHC 2 cut(s) 1256, 1422
Bsp13I TCCGGA 1 cut(s) 601
BspACI CCGC 2 cut(s) 29, 1428
BspANI GGCC 3 cut(s) 263, 597, 1171
BspCNI CTCAG 4 cut(s) 38, 1004, 1240, 1279
BspEI TCCGGA 1 cut(s) 601
BspLI GGNNCC 2 cut(s) 76, 667
BspMAI CTGCAG 1 cut(s) 402
BspPI GGATC 3 cut(s) 109, 517, 1368
BspT107I GGYRCC 1 cut(s) 665
BsrDI GCAATG 2 cut(s) 1128, 1388
BsrI ACTGG 1 cut(s) 1178
BssECI CCNNGG 2 cut(s) 539, 1047
Bst2UI CCWGG 2 cut(s) 540, 798
Bst4CI ACNGT 2 cut(s) 332, 1142
Bst6I CTCTTC 1 cut(s) 466
BstAPI GCANNNNNTGC 1 cut(s) 1118
BstDEI CTNAG 5 cut(s) 25, 851, 991, 1248, 1287
BstDSI CCRYGG 1 cut(s) 1047
BstF5I GGATG 1 cut(s) 705
BstHHI GCGC 1 cut(s) 1195
BstMAI GTCTC 3 cut(s) 338, 381, 463
BstMWI GCNNNNNNNGC 2 cut(s) 1118, 1190
BstNI CCWGG 2 cut(s) 540, 798
BstSCI CCNGG 3 cut(s) 538, 796, 1430
BstSFI CTRYAG 1 cut(s) 398
BstV1I GCAGC 2 cut(s) 59, 384
BstV2I GAAGAC 1 cut(s) 1143
BstX2I RGATCY 5 cut(s) 101, 190, 409, 1305, 1360
BstYI RGATCY 5 cut(s) 101, 190, 409, 1305, 1360
BsuRI GGCC 3 cut(s) 263, 597, 1171
BtgI CCRYGG 1 cut(s) 1047
BtrI CACGTC 1 cut(s) 1274
BtsCI GGATG 1 cut(s) 705
BtsI GCAGTG 2 cut(s) 677, 1114
BtsIMutI CAGTG 2 cut(s) 677, 1114
CfoI GCGC 1 cut(s) 1195
Cfr13I GGNCC 3 cut(s) 287, 775, 1205
Csp6I GTAC 2 cut(s) 466, 666
CviAII CATG 1 cut(s) 71
CviQI GTAC 2 cut(s) 466, 666
DdeI CTNAG 5 cut(s) 25, 851, 991, 1248, 1287
EaeI YGGCCR 1 cut(s) 1169
Eam1104I CTCTTC 1 cut(s) 466
EarI CTCTTC 1 cut(s) 466
Eco24I GRGCYC 1 cut(s) 1422
Eco47I GGWCC 3 cut(s) 287, 775, 1205
Eco57I CTGAAG 2 cut(s) 113, 530
EcoO109I RGGNCCY 1 cut(s) 1205
EcoRII CCWGG 2 cut(s) 538, 796
EcoT38I GRGCYC 1 cut(s) 1422
FaeI CATG 1 cut(s) 74
FaqI GGGAC 1 cut(s) 963
FatI CATG 1 cut(s) 70
FbaI TGATCA 2 cut(s) 834, 1153
FblI GTMKAC 1 cut(s) 1270
Fnu4HI GCNGC 2 cut(s) 48, 398
FokI GGATG 1 cut(s) 712
FriOI GRGCYC 1 cut(s) 1422
Fsp4HI GCNGC 2 cut(s) 48, 398
FspBI CTAG 7 cut(s) 116, 233, 473, 875, 1011, 1262, 1394
GlaI GCGC 1 cut(s) 1194
GluI GCNGC 2 cut(s) 48, 398
GsuI CTGGAG 1 cut(s) 935
HaeIII GGCC 3 cut(s) 263, 597, 1171
HapII CCGG 4 cut(s) 83, 152, 602, 1431
HhaI GCGC 1 cut(s) 1195
Hin1II CATG 1 cut(s) 74
Hin6I GCGC 1 cut(s) 1193
HinP1I GCGC 1 cut(s) 1193
HincII GTYRAC 1 cut(s) 1271
HindII GTYRAC 1 cut(s) 1271
HindIII AAGCTT 1 cut(s) 323
HinfI GANTC 6 cut(s) 110, 144, 155, 605, 793, 943
HpaII CCGG 4 cut(s) 83, 152, 602, 1431
HphI GGTGA 2 cut(s) 1030, 1154
Hpy166II GTNNAC 1 cut(s) 1271
Hpy188I TCNGA 8 cut(s) 16, 93, 184, 199, 291, 784, 804, 834
Hpy8I GTNNAC 1 cut(s) 1271
Hpy99I CGWCG 1 cut(s) 1275
HpyAV CCTTC 3 cut(s) 500, 608, 646
HpyCH4III ACNGT 2 cut(s) 332, 1142
HpyCH4IV ACGT 1 cut(s) 1273
HpyCH4V TGCA 8 cut(s) 204, 400, 682, 1107, 1112, 1121, 1328, 1405
HpyF10VI GCNNNNNNNGC 2 cut(s) 1118, 1190
HpyF3I CTNAG 5 cut(s) 25, 851, 991, 1248, 1287
HpySE526I ACGT 1 cut(s) 1273
Hsp92II CATG 1 cut(s) 74
HspAI GCGC 1 cut(s) 1193
Kpn2I TCCGGA 1 cut(s) 601
KpnI GGTACC 1 cut(s) 669
Ksp22I TGATCA 2 cut(s) 834, 1153
LmnI GCTCC 3 cut(s) 215, 823, 886
Lsp1109I GCAGC 2 cut(s) 59, 384
LweI GCATC 2 cut(s) 690, 1315
MaeI CTAG 7 cut(s) 116, 233, 473, 875, 1011, 1262, 1394
MaeII ACGT 1 cut(s) 1273
MaeIII GTNAC 4 cut(s) 228, 857, 1073, 1142
MboII GAAGA 8 cut(s) 106, 453, 488, 527, 555, 612, 920, 1148
MfeI CAATTG 4 cut(s) 248, 437, 811, 1020
MflI RGATCY 5 cut(s) 101, 190, 409, 1305, 1360
MhlI GDGCHC 2 cut(s) 1256, 1422
MlsI TGGCCA 1 cut(s) 1171
MluNI TGGCCA 1 cut(s) 1171
MlyI GAGTC 3 cut(s) 149, 153, 614
MnlI CCTC 5 cut(s) 34, 396, 840, 1267, 1371
Mox20I TGGCCA 1 cut(s) 1171
MroI TCCGGA 1 cut(s) 601
MroXI GAANNNNTTC 2 cut(s) 616, 731
MscI TGGCCA 1 cut(s) 1171
MseI TTAA 6 cut(s) 171, 294, 531, 555, 764, 1131
MslI CAYNNNNRTG 1 cut(s) 1161
Msp20I TGGCCA 1 cut(s) 1171
MspA1I CMGCKG 1 cut(s) 29
MspI CCGG 4 cut(s) 83, 152, 602, 1431
MspR9I CCNGG 3 cut(s) 540, 798, 1432
MunI CAATTG 4 cut(s) 248, 437, 811, 1020
MvaI CCWGG 2 cut(s) 540, 798
MwoI GCNNNNNNNGC 2 cut(s) 1118, 1190
NciI CCSGG 1 cut(s) 1432
NlaIII CATG 1 cut(s) 74
NlaIV GGNNCC 2 cut(s) 76, 667
NmuCI GTSAC 2 cut(s) 228, 1142
PdmI GAANNNNTTC 2 cut(s) 616, 731
PfeI GAWTC 3 cut(s) 110, 793, 943
PflMI CCANNNNNTGG 1 cut(s) 306
PkrI GCNGC 2 cut(s) 49, 399
PleI GAGTC 3 cut(s) 149, 152, 613
PpsI GAGTC 3 cut(s) 149, 152, 613
PpuMI RGGWCCY 1 cut(s) 1205
PshBI ATTAAT 1 cut(s) 294
Psp5II RGGWCCY 1 cut(s) 1205
Psp6I CCWGG 2 cut(s) 538, 796
PspGI CCWGG 2 cut(s) 538, 796
PspN4I GGNNCC 2 cut(s) 76, 667
PspPI GGNCC 3 cut(s) 287, 775, 1205
PspPPI RGGWCCY 1 cut(s) 1205
PstI CTGCAG 1 cut(s) 402
PsuI RGATCY 5 cut(s) 101, 190, 409, 1305, 1360
RsaI GTAC 2 cut(s) 467, 667
RsaNI GTAC 2 cut(s) 466, 666
RseI CAYNNNNRTG 1 cut(s) 1161
SalI GTCGAC 1 cut(s) 1269
SaqAI TTAA 6 cut(s) 171, 294, 531, 555, 764, 1131
SatI GCNGC 2 cut(s) 48, 398
Sau96I GGNCC 3 cut(s) 287, 775, 1205
SchI GAGTC 3 cut(s) 149, 153, 614
ScrFI CCNGG 3 cut(s) 540, 798, 1432
SduI GDGCHC 2 cut(s) 1256, 1422
SfaNI GCATC 2 cut(s) 690, 1315
SfcI CTRYAG 1 cut(s) 398
SinI GGWCC 3 cut(s) 287, 775, 1205
SmiMI CAYNNNNRTG 1 cut(s) 1161
SmlI CTYRAG 3 cut(s) 574, 1185, 1413
SmoI CTYRAG 3 cut(s) 574, 1185, 1413
SsiI CCGC 2 cut(s) 29, 1428
SspMI CTAG 7 cut(s) 116, 233, 473, 875, 1011, 1262, 1394
StyD4I CCNGG 3 cut(s) 538, 796, 1430
TaaI ACNGT 2 cut(s) 332, 1142
TaiI ACGT 1 cut(s) 1276
TaqI TCGA 6 cut(s) 108, 336, 608, 1231, 1270, 1351
TfiI GAWTC 3 cut(s) 110, 793, 943
Tru1I TTAA 6 cut(s) 171, 294, 531, 555, 764, 1131
Tru9I TTAA 6 cut(s) 171, 294, 531, 555, 764, 1131
TscAI CASTG 2 cut(s) 684, 1114
TseFI GTSAC 2 cut(s) 228, 1142
TseI GCWGC 2 cut(s) 47, 397
Tsp45I GTSAC 2 cut(s) 228, 1142
TspDTI ATGAA 2 cut(s) 59, 1149
TspGWI ACGGA 1 cut(s) 712
TspRI CASTG 2 cut(s) 684, 1114
Van91I CCANNNNNTGG 1 cut(s) 306
VpaK11BI GGWCC 3 cut(s) 287, 775, 1205
VspI ATTAAT 1 cut(s) 294
XapI RAATTY 4 cut(s) 134, 446, 706, 1089
XbaI TCTAGA 1 cut(s) 874
XmiI GTMKAC 1 cut(s) 1270
XmnI GAANNNNTTC 2 cut(s) 616, 731
XspI CTAG 7 cut(s) 116, 233, 473, 875, 1011, 1262, 1394
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.