RchiOBHm_Chr1g0351911

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000047
Physical Location & Seq
Forward (+)
45064117 .. 45067043
2927 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ57766

Sequence Viewer

Length: 2841 bp
ATGAGAACTTTGCTACATTTCTTCCTTTTCTTGATCACACTCTGGGTCAGTATCATCATCCCACCAGTTCACAGCCAGTGTATTAAAGACCAGCAACTATCATTGCTCCAATTCAAGAAAAGCCTCGTGTTTGTTTCTCTCCATCCTTCCACCAAGCTTATTTCTTGGAATGCAAGTACTGATTGTTGTTCTTGGGTCGGCGTCACTTGCAGCCGTAATGGGCGTGTTCTGGGTCTTGACATAAGCAGTGAACATGTCTCAGCTGGAATTGACAATTCCAGCAGTCTCTTCCATCTCCATTATCTTCAAAGCCTCAACCTGGCGGACAACCTCCTCGGCAGCGACTCTCAATCAATTCCATCCGCGATCGGAAAGCTCGCGAACTTGAGGTATCTGGATTTATCTGATAATCGTTATCCAGGGAAAATTCCCATCGAGATTTCACGCTTGACGAGGTTGGTGGTTCTTGCTTTGTCTGACAATGTACAACTTGGAAGTCCAAATTTACGCATGTTGGTTCAAAACTTCACAGAGCTTAGAGAGTTATATCTTGATAGTGTCCAAATATCAGAACAGGGGAGTGAGTGGTGCCAAGCCATATCATCTTCCCTTCCCAACCTCAAGGTTTTGAGCTTGTCCTCTTGTAATCTTTCAGGCCCTCTTCTCGAGTCCCTTGCTAAGCTTCAGTCTCTATCCGTGATTAGGTTGAACTGGAACAATATCTCTGCGCCAGTTCCAGGATTCTTTGCCAACTTTTCAAACTTGACTGTCTTGAGTCTCCCGGGATGCGAGTTGCATGGAACATTTCCCAAAGAGATCTTTCAGTTGCCTTCTCTACAAAGTATTGACCTTTCATTTAATGACCAACTCGATGGTTCCTTGCCAGAATTCCCAAGGAATGGATCTCTTCAGTACCTGGATCTAAGCTGGACAAATTTTTCAGGGTTATTGCCAAATTCTATTGGCAATCTCAAAATGTTGTCCACCATATATATTCAAGAATGCTATTTCACCGGACCGATGCCCAAGTCAATGACAAACCTTACACGGTTGGTTTCTTTGTCGATGTCTGGTAACAAGTTGGAAGGTTCAATTCCGTCATTCAGTGGGGCCAAGAATGTGAACTTCATAGACCTTTCCTACAATGGTCTAACAGCATCTCTGTTTTCTCTTCCCCTTTTGGATTACCTAGATCTTTCCAGCAATCAATTCTCTGGTCCATTGCCTGAAATTTCAAATGTGTCTTCCTACCTGCTGAATGGTCCTAATCTTGAACTTGATTTGAGAAATCAATCTAACTTATCTCATTTGGACCTTTCAAATAACCAGATAAATGGCAAGATAGCCGACTGGATTTGGAGTTTAAATAATCTCAATCTCCTAAATCTTTCTTGCAACTCCCTAGGTTCTCTAGAAGTTCATTCAATTAATCTCACTAATCTAAATTACCTTGACCTTCATTCCAACCAGTTTCATGGGCAAATCCCAATTTTTCCATCACCTTGCAATGCCAATTATCTAGATTTCTCCAGGAATTATTTCATCTCTATCATACCGAGTACCATTGGATATGTGTTTCCCAGAACAACCTTTTTCTCACTTTCGAGCAATAACCTCAATGGGATCATTCCAGAATCATTATGCAATTCACATTTTCTTAAGATTCTTGATTTGTCCAATAGCTCTTTGAGTGGCACGGTTCCCCACTGCTTAACGACAATGTGGAGTCTTGAAGTACTCAACGTAAGGAGAAACAATCTTACAAATGTTGATGACTTCTCTCATAATTGCGGGTTAAAAACTCTAGACATAAGTGAAAATCACCTTCAAGGCCGGTTTCTAAAATCTCTTGTCAACTGCACCCAGTTAGAGGTTTTAAACCTTGGAAAAAATTTGATAACAGAACCATTTCCCTGCTTTTTAAGGAACACATCCACCTTGCGTGTCCTCGTCTTGCGATCCAACAAATTTTATGGGCACATTGGATGTCACAAGACTAATGGCAGTTGGCCAGTACTTCAAATCATAGACTTAGCTCACAACAATTTTAGTGGTGAAGTACCTGGAACAGCTTTGACAACCTTGCAGGCGATGAGGACTAGCAAAGATGCTGCCCCATGGAAGATCAATAACCTTCAATTTGATTTGGATGGAATTTATTATCAAGAAGATACAATCACAGTTACCAACAAAGGTTTAGACATGGAGCTGGTGTTTGTTTTAGCTATATTCACCTCCATTGACTTCTCGTACAACAAGTTCAACGGATCAATACCCAAGGAAATTGGAGAACTCAAATCATTGTATGCCCTCAACTTGTCCAACAATGCTTTCACAGGTGCAGTTCCATCATCACTAGGTAACTTGAGTCAGCTAGAGTCCTTGGACCTCTCGAAAAACAAACTAAGCGGTCAAATCCCACCGGAGCTTACAAAACTCACTTTCCTTGAATTCTTGAATCTCTCATATAATCAATTGGTCGGGAGGATACCAAGTGGTGCTCAATTTTCAACATTTGATGCAGCTTCTTTCGAAGGTAATAAAGGATTATGGGGGCCTCCTTTGACAGCAGATAATCGAACAGGGTTCTCATCACCAAAGCTAGAAGGAAACCATTCAAATGCTAGACATGAGATTGATTGGGATATTATCTGTCCTGAAATTGGGTTTACATGTGGGTTTGGGATTGTCATCGGGTCACTTTTGTTTTGCAAGAGATGGAGGAAATGGTATTACAGTGCTATGTATAACATGCTTCTGAAGATATTCCCTCAGCTGGAACAAAGATTTGGTCATCACAGGAGACATGTTTACGTACATCAAAGATACTGGAGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

946

Amino Acids

105.64

Weight (kDa)

6.66

Isoelectric Point (pI)

37.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 29 - 71 2.5e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 70 - 286 3.1e-16 Leucine-rich repeat region
LRR_14 PF23598 302 - 528 8.2e-09 Leucine-rich repeat region
LRR_8 PF13855 553 - 609 4.7e-06 Leucine rich repeat
LRR_14 PF23598 757 - 821 1.5e-06 Leucine-rich repeat region
LRR_8 PF13855 767 - 826 2e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1260
AccB1I GGYRCC 1 cut(s) 588
AccB7I CCANNNNNTGG 1 cut(s) 899
AccII CGCG 2 cut(s) 365, 380
AciI CCGC 4 cut(s) 323, 363, 1791, 2409
AclWI GGATC 5 cut(s) 910, 927, 1631, 1953, 2275
AcoI YGGCCR 1 cut(s) 2009
AcuI CTGAAG 3 cut(s) 668, 893, 2780
AcyI GRCGYC 1 cut(s) 201
AfaI GTAC 9 cut(s) 178, 486, 914, 1561, 1737, 2016, 2061, 2252, 2817
AfiI CCNNNNNNNGG 7 cut(s) 319, 702, 737, 899, 1870, 2663, 2776
AflII CTTAAG 1 cut(s) 1658
AflIII ACRYGT 3 cut(s) 253, 2672, 2806
AjnI CCWGG 6 cut(s) 318, 418, 736, 915, 1529, 2062
AjuI GAANNNNNNNTTGG 4 cut(s) 2315, 2347, 2772, 2804
Alw21I GWGCWC 1 cut(s) 2503
Alw26I GTCTC 6 cut(s) 262, 290, 693, 782, 2797, 2827
AlwI GGATC 5 cut(s) 910, 927, 1631, 1953, 2275
AlwNI CAGNNNCTG 1 cut(s) 916
Ama87I CYCGRG 2 cut(s) 665, 781
AoxI GGCC 5 cut(s) 655, 1110, 1831, 2009, 2555
ApeKI GCWGC 4 cut(s) 210, 339, 2111, 2522
ArsI GACNNNNNNTTYG 2 cut(s) 2776, 2808
AseI ATTAAT 1 cut(s) 1428
Asp700I GAANNNNTTC 4 cut(s) 1538, 1908, 2614, 2765
AspA2I CCTAGG 1 cut(s) 1402
AspLEI GCGC 1 cut(s) 730
AspS9I GGNCC 8 cut(s) 656, 1016, 1110, 1217, 1262, 1312, 2386, 2555
AsuC2I CCSGG 2 cut(s) 782, 783
AsuHPI GGTGA 6 cut(s) 1003, 1491, 1814, 2066, 2224, 2586
AsuII TTCGAA 1 cut(s) 2532
AvaI CYCGRG 2 cut(s) 665, 781
AvaII GGWCC 5 cut(s) 1016, 1217, 1262, 1312, 2386
AvrII CCTAGG 1 cut(s) 1402
BaeGI GKGCMC 1 cut(s) 1980
BalI TGGCCA 1 cut(s) 2011
BanI GGYRCC 1 cut(s) 588
BauI CACGAG 1 cut(s) 125
BbsI GAAGAC 1 cut(s) 1236
Bbv12I GWGCWC 1 cut(s) 2503
BbvCI CCTCAGC 1 cut(s) 2772
BbvI GCAGC 4 cut(s) 222, 351, 2098, 2534
BccI CCATC 9 cut(s) 150, 300, 367, 440, 866, 1504, 2144, 2356, 2712
BceAI ACGGC 1 cut(s) 198
BcgI CGANNNNNNTGC 2 cut(s) 656, 690
BciT130I CCWGG 6 cut(s) 320, 420, 738, 917, 1531, 2064
BciVI GTATCC 1 cut(s) 2481
BclI TGATCA 1 cut(s) 33
BcnI CCSGG 2 cut(s) 782, 783
BcoDI GTCTC 6 cut(s) 262, 290, 693, 782, 2797, 2827
BfrI CTTAAG 1 cut(s) 1658
BfuAI ACCTGC 1 cut(s) 1260
BfuI GTATCC 1 cut(s) 2481
BglII AGATCT 2 cut(s) 816, 1192
BisI GCNGC 4 cut(s) 211, 340, 2112, 2523
BlnI CCTAGG 1 cut(s) 1402
BlpI GCTNAGC 1 cut(s) 678
BlsI GCNGC 4 cut(s) 212, 341, 2113, 2524
BmcAI AGTACT 3 cut(s) 178, 1737, 2016
Bme1390I CCNGG 8 cut(s) 320, 420, 738, 782, 783, 917, 1531, 2064
Bme18I GGWCC 5 cut(s) 1016, 1217, 1262, 1312, 2386
BmeT110I CYCGRG 2 cut(s) 665, 781
BmgT120I GGNCC 8 cut(s) 656, 1016, 1110, 1217, 1262, 1312, 2386, 2555
BmiI GGNNCC 5 cut(s) 590, 877, 1111, 1701, 2556
BmrFI CCNGG 8 cut(s) 320, 420, 738, 782, 783, 917, 1531, 2064
BmrI ACTGGG 1 cut(s) 1858
BmsI GCATC 5 cut(s) 776, 1011, 1166, 2098, 2509
BmuI ACTGGG 1 cut(s) 1858
BpiI GAAGAC 1 cut(s) 1236
BpmI CTGGAG 1 cut(s) 1513
Bpu10I CCTNAGC 1 cut(s) 2772
Bpu1102I GCTNAGC 1 cut(s) 678
Bpu14I TTCGAA 1 cut(s) 2532
BpuEI CTTGAG 4 cut(s) 406, 605, 793, 2386
BpuMI CCSGG 2 cut(s) 782, 783
BsaAI YACGTR 1 cut(s) 2815
BsaBI GATNNNNATC 1 cut(s) 2690
BsaHI GRCGYC 1 cut(s) 201
BsaJI CCNNGG 9 cut(s) 334, 419, 781, 893, 1402, 1882, 2117, 2277, 2382
BsaWI WCCGGW 2 cut(s) 1013, 2422
BsaXI ACNNNNNCTCC 2 cut(s) 2198, 2228
Bsc4I CCNNNNNNNGG 7 cut(s) 319, 702, 737, 899, 1870, 2663, 2776
Bse118I RCCGGY 1 cut(s) 1833
Bse1I ACTGG 9 cut(s) 65, 76, 716, 731, 1355, 1468, 1864, 2012, 2834
Bse3DI GCAATG 3 cut(s) 101, 1220, 1513
Bse8I GATNNNNATC 1 cut(s) 2690
BseBI CCWGG 6 cut(s) 320, 420, 738, 917, 1531, 2064
BseDI CCNNGG 9 cut(s) 334, 419, 781, 893, 1402, 1882, 2117, 2277, 2382
BseGI GGATG 7 cut(s) 57, 142, 359, 791, 1931, 1991, 2155
BseJI GATNNNNATC 1 cut(s) 2690
BseLI CCNNNNNNNGG 7 cut(s) 319, 702, 737, 899, 1870, 2663, 2776
BseMI GCAATG 3 cut(s) 101, 1220, 1513
BseMII CTCAG 2 cut(s) 273, 2786
BseNI ACTGG 9 cut(s) 65, 76, 716, 731, 1355, 1468, 1864, 2012, 2834
BseRI GAGGAG 1 cut(s) 323
BseSI GKGCMC 1 cut(s) 1980
BseXI GCAGC 4 cut(s) 222, 351, 2098, 2534
BsgI GTGCAG 2 cut(s) 1843, 2361
Bsh1236I CGCG 2 cut(s) 365, 380
Bsh1285I CGRYCG 1 cut(s) 369
BshFI GGCC 5 cut(s) 657, 1112, 1833, 2011, 2557
BshNI GGYRCC 1 cut(s) 588
BsiEI CGRYCG 1 cut(s) 369
BsiHKAI GWGCWC 1 cut(s) 2503
BsiHKCI CYCGRG 2 cut(s) 665, 781
BsiSI CCGG 4 cut(s) 782, 1014, 1834, 2423
BslFI GGGAC 1 cut(s) 655
BslI CCNNNNNNNGG 7 cut(s) 319, 702, 737, 899, 1870, 2663, 2776
BsmAI GTCTC 6 cut(s) 262, 290, 693, 782, 2797, 2827
BsmBI CGTCTC 1 cut(s) 2827
BsmFI GGGAC 1 cut(s) 655
BsmI GAATGC 2 cut(s) 175, 1007
BsnI GGCC 5 cut(s) 657, 1112, 1833, 2011, 2557
BsoBI CYCGRG 2 cut(s) 665, 781
Bsp119I TTCGAA 1 cut(s) 2532
Bsp1286I GDGCHC 2 cut(s) 1980, 2503
Bsp1407I TGTACA 1 cut(s) 484
Bsp1720I GCTNAGC 1 cut(s) 678
Bsp19I CCATGG 1 cut(s) 2117
Bsp68I TCGCGA 1 cut(s) 380
BspACI CCGC 4 cut(s) 323, 363, 1791, 2409
BspANI GGCC 5 cut(s) 657, 1112, 1833, 2011, 2557
BspCNI CTCAG 2 cut(s) 272, 2785
BspFNI CGCG 2 cut(s) 365, 380
BspLI GGNNCC 5 cut(s) 590, 877, 1111, 1701, 2556
BspMI ACCTGC 1 cut(s) 1260
BspPI GGATC 5 cut(s) 910, 927, 1631, 1953, 2275
BspT104I TTCGAA 1 cut(s) 2532
BspT107I GGYRCC 1 cut(s) 588
BspTI CTTAAG 1 cut(s) 1658
BsrDI GCAATG 3 cut(s) 101, 1220, 1513
BsrFI RCCGGY 1 cut(s) 1833
BsrGI TGTACA 1 cut(s) 484
BsrI ACTGG 9 cut(s) 65, 76, 716, 731, 1355, 1468, 1864, 2012, 2834
BssAI RCCGGY 1 cut(s) 1833
BssECI CCNNGG 9 cut(s) 334, 419, 781, 893, 1402, 1882, 2117, 2277, 2382
BssNI GRCGYC 1 cut(s) 201
BssSI CACGAG 1 cut(s) 125
BssT1I CCWWGG 6 cut(s) 893, 1402, 1882, 2117, 2277, 2382
Bst2BI CACGAG 1 cut(s) 125
Bst2UI CCWGG 6 cut(s) 320, 420, 738, 917, 1531, 2064
Bst4CI ACNGT 5 cut(s) 769, 1050, 1699, 2182, 2738
Bst6I CTCTTC 4 cut(s) 293, 666, 912, 1176
BstACI GRCGYC 1 cut(s) 201
BstAFI CTTAAG 1 cut(s) 1658
BstAUI TGTACA 1 cut(s) 484
BstBAI YACGTR 1 cut(s) 2815
BstBI TTCGAA 1 cut(s) 2532
BstC8I GCNNGC 2 cut(s) 378, 2088
BstDEI CTNAG 7 cut(s) 259, 536, 678, 923, 2032, 2405, 2772
BstDSI CCRYGG 1 cut(s) 2117
BstF5I GGATG 7 cut(s) 57, 142, 359, 791, 1931, 1991, 2155
BstFNI CGCG 2 cut(s) 365, 380
BstHHI GCGC 1 cut(s) 730
BstMAI GTCTC 6 cut(s) 262, 290, 693, 782, 2797, 2827
BstMCI CGRYCG 1 cut(s) 369
BstMWI GCNNNNNNNGC 1 cut(s) 207
BstNI CCWGG 6 cut(s) 320, 420, 738, 917, 1531, 2064
BstNSI RCATGY 5 cut(s) 257, 514, 2676, 2755, 2810
BstSCI CCNGG 8 cut(s) 318, 418, 736, 780, 781, 915, 1529, 2062
BstSLI GKGCMC 1 cut(s) 1980
BstSNI TACGTA 1 cut(s) 2815
BstUI CGCG 2 cut(s) 365, 380
BstV1I GCAGC 4 cut(s) 222, 351, 2098, 2534
BstV2I GAAGAC 1 cut(s) 1236
BstX2I RGATCY 4 cut(s) 816, 902, 919, 1192
BstXI CCANNNNNNTGG 3 cut(s) 872, 1334, 1475
BstYI RGATCY 4 cut(s) 816, 902, 919, 1192
BsuI GTATCC 1 cut(s) 2481
BsuRI GGCC 5 cut(s) 657, 1112, 1833, 2011, 2557
BtgI CCRYGG 1 cut(s) 2117
BtgZI GCGATG 1 cut(s) 2105
BtsCI GGATG 7 cut(s) 57, 142, 359, 791, 1931, 1991, 2155
BtsI GCAGTG 2 cut(s) 253, 1705
BtsIMutI CAGTG 5 cut(s) 83, 253, 1111, 1705, 2743
BtuMI TCGCGA 1 cut(s) 380
BveI ACCTGC 1 cut(s) 1260
Cac8I GCNNGC 2 cut(s) 378, 2088
CaiI CAGNNNCTG 1 cut(s) 916
CfoI GCGC 1 cut(s) 730
Cfr10I RCCGGY 1 cut(s) 1833
Cfr13I GGNCC 8 cut(s) 656, 1016, 1110, 1217, 1262, 1312, 2386, 2555
Cfr9I CCCGGG 1 cut(s) 781
CpoI CGGWCCG 1 cut(s) 1016
CseI GACGC 1 cut(s) 190
Csp6I GTAC 9 cut(s) 177, 485, 913, 1560, 1736, 2015, 2060, 2251, 2816
CspCI CAANNNNNGTGG 2 cut(s) 2032, 2067
CspI CGGWCCG 1 cut(s) 1016
CviQI GTAC 9 cut(s) 177, 485, 913, 1560, 1736, 2015, 2060, 2251, 2816
DdeI CTNAG 7 cut(s) 259, 536, 678, 923, 2032, 2405, 2772
DraI TTTAAA 2 cut(s) 1365, 1878
EaeI YGGCCR 1 cut(s) 2009
Eam1104I CTCTTC 4 cut(s) 293, 666, 912, 1176
EarI CTCTTC 4 cut(s) 293, 666, 912, 1176
EciI GGCGGA 1 cut(s) 338
Eco105I TACGTA 1 cut(s) 2815
Eco130I CCWWGG 6 cut(s) 893, 1402, 1882, 2117, 2277, 2382
Eco47I GGWCC 5 cut(s) 1016, 1217, 1262, 1312, 2386
Eco57I CTGAAG 3 cut(s) 668, 893, 2780
Eco88I CYCGRG 2 cut(s) 665, 781
EcoO109I RGGNCCY 2 cut(s) 656, 2555
EcoRI GAATTC 2 cut(s) 887, 2450
EcoRII CCWGG 6 cut(s) 318, 418, 736, 915, 1529, 2062
EcoT14I CCWWGG 6 cut(s) 893, 1402, 1882, 2117, 2277, 2382
ErhI CCWWGG 6 cut(s) 893, 1402, 1882, 2117, 2277, 2382
Esp3I CGTCTC 1 cut(s) 2827
FaqI GGGAC 1 cut(s) 655
FauI CCCGC 1 cut(s) 1784
FbaI TGATCA 1 cut(s) 33
Fnu4HI GCNGC 4 cut(s) 211, 340, 2112, 2523
FokI GGATG 7 cut(s) 44, 129, 346, 798, 1918, 1998, 2162
Fsp4HI GCNGC 4 cut(s) 211, 340, 2112, 2523
GlaI GCGC 1 cut(s) 729
GluI GCNGC 4 cut(s) 211, 340, 2112, 2523
GsuI CTGGAG 1 cut(s) 1513
HaeIII GGCC 5 cut(s) 657, 1112, 1833, 2011, 2557
HapII CCGG 4 cut(s) 782, 1014, 1834, 2423
HgaI GACGC 1 cut(s) 190
HhaI GCGC 1 cut(s) 730
Hin1I GRCGYC 1 cut(s) 201
Hin6I GCGC 1 cut(s) 728
HinP1I GCGC 1 cut(s) 728
HincII GTYRAC 1 cut(s) 1855
HindII GTYRAC 1 cut(s) 1855
HindIII AAGCTT 2 cut(s) 155, 680
HpaII CCGG 4 cut(s) 782, 1014, 1834, 2423
HphI GGTGA 6 cut(s) 1003, 1491, 1814, 2066, 2224, 2586
Hpy166II GTNNAC 7 cut(s) 70, 251, 984, 1123, 1855, 2670, 2812
Hpy188I TCNGA 5 cut(s) 371, 406, 478, 571, 2760
Hpy8I GTNNAC 7 cut(s) 70, 251, 984, 1123, 1855, 2670, 2812
HpyAV CCTTC 9 cut(s) 156, 620, 840, 1079, 1466, 1835, 2144, 2528, 2600
HpyCH4III ACNGT 5 cut(s) 769, 1050, 1699, 2182, 2738
HpyCH4IV ACGT 3 cut(s) 1743, 2814, 2836
HpyF10VI GCNNNNNNNGC 1 cut(s) 207
HpyF3I CTNAG 7 cut(s) 259, 536, 678, 923, 2032, 2405, 2772
HpySE526I ACGT 3 cut(s) 1743, 2814, 2836
Hsp92I GRCGYC 1 cut(s) 201
HspAI GCGC 1 cut(s) 728
Ksp22I TGATCA 1 cut(s) 33
LmnI GCTCC 3 cut(s) 111, 2206, 2425
Lsp1109I GCAGC 4 cut(s) 222, 351, 2098, 2534
LweI GCATC 5 cut(s) 776, 1011, 1166, 2098, 2509
MaeII ACGT 3 cut(s) 1743, 2814, 2836
MaeIII GTNAC 6 cut(s) 202, 1073, 1988, 2182, 2360, 2697
MfeI CAATTG 1 cut(s) 2474
MflI RGATCY 4 cut(s) 816, 902, 919, 1192
MhlI GDGCHC 2 cut(s) 1980, 2503
MlsI TGGCCA 1 cut(s) 2011
MluNI TGGCCA 1 cut(s) 2011
MlyI GAGTC 6 cut(s) 338, 677, 784, 1735, 2377, 2387
MmeI TCCRAC 4 cut(s) 1062, 1488, 1986, 2346
Mox20I TGGCCA 1 cut(s) 2011
MroXI GAANNNNTTC 4 cut(s) 1538, 1908, 2614, 2765
MscI TGGCCA 1 cut(s) 2011
MseI TTAA 9 cut(s) 84, 858, 1364, 1428, 1659, 1712, 1796, 1877, 1922
MslI CAYNNNNRTG 1 cut(s) 2619
Msp20I TGGCCA 1 cut(s) 2011
MspA1I CMGCKG 2 cut(s) 263, 2776
MspCI CTTAAG 1 cut(s) 1658
MspI CCGG 4 cut(s) 782, 1014, 1834, 2423
MspR9I CCNGG 8 cut(s) 320, 420, 738, 782, 783, 917, 1531, 2064
MunI CAATTG 1 cut(s) 2474
Mva1269I GAATGC 2 cut(s) 175, 1007
MvaI CCWGG 6 cut(s) 320, 420, 738, 917, 1531, 2064
MvnI CGCG 2 cut(s) 365, 380
MwoI GCNNNNNNNGC 1 cut(s) 207
NciI CCSGG 2 cut(s) 782, 783
NcoI CCATGG 1 cut(s) 2117
NlaIV GGNNCC 5 cut(s) 590, 877, 1111, 1701, 2556
NmeAIII GCCGAG 1 cut(s) 315
NmuCI GTSAC 3 cut(s) 202, 1988, 2697
NruI TCGCGA 1 cut(s) 380
NspI RCATGY 5 cut(s) 257, 514, 2676, 2755, 2810
NspV TTCGAA 1 cut(s) 2532
PaeR7I CTCGAG 1 cut(s) 665
PciI ACATGT 3 cut(s) 253, 2672, 2806
PctI GAATGC 2 cut(s) 175, 1007
PdmI GAANNNNTTC 4 cut(s) 1538, 1908, 2614, 2765
PfeI GAWTC 4 cut(s) 741, 1634, 1663, 2458
PflMI CCANNNNNTGG 1 cut(s) 899
PfoI TCCNGGA 2 cut(s) 736, 1529
PkrI GCNGC 4 cut(s) 212, 341, 2113, 2524
Ple19I CGATCG 1 cut(s) 369
PleI GAGTC 6 cut(s) 338, 676, 783, 1734, 2376, 2386
PpsI GAGTC 6 cut(s) 338, 676, 783, 1734, 2376, 2386
Ppu21I YACGTR 1 cut(s) 2815
PscI ACATGT 3 cut(s) 253, 2672, 2806
PshBI ATTAAT 1 cut(s) 1428
Psp6I CCWGG 6 cut(s) 318, 418, 736, 915, 1529, 2062
PspGI CCWGG 6 cut(s) 318, 418, 736, 915, 1529, 2062
PspN4I GGNNCC 5 cut(s) 590, 877, 1111, 1701, 2556
PspPI GGNCC 8 cut(s) 656, 1016, 1110, 1217, 1262, 1312, 2386, 2555
PsrI GAACNNNNNNTAC 2 cut(s) 2243, 2275
PstNI CAGNNNCTG 1 cut(s) 916
PsuI RGATCY 4 cut(s) 816, 902, 919, 1192
PvuI CGATCG 1 cut(s) 369
PvuII CAGCTG 2 cut(s) 263, 2776
RruI TCGCGA 1 cut(s) 380
RsaI GTAC 9 cut(s) 178, 486, 914, 1561, 1737, 2016, 2061, 2252, 2817
RsaNI GTAC 9 cut(s) 177, 485, 913, 1560, 1736, 2015, 2060, 2251, 2816
RseI CAYNNNNRTG 1 cut(s) 2619
Rsr2I CGGWCCG 1 cut(s) 1016
RsrII CGGWCCG 1 cut(s) 1016
SaqAI TTAA 9 cut(s) 84, 858, 1364, 1428, 1659, 1712, 1796, 1877, 1922
SatI GCNGC 4 cut(s) 211, 340, 2112, 2523
Sau96I GGNCC 8 cut(s) 656, 1016, 1110, 1217, 1262, 1312, 2386, 2555
ScaI AGTACT 3 cut(s) 178, 1737, 2016
SchI GAGTC 6 cut(s) 338, 677, 784, 1735, 2377, 2387
ScrFI CCNGG 8 cut(s) 320, 420, 738, 782, 783, 917, 1531, 2064
SduI GDGCHC 2 cut(s) 1980, 2503
SfaNI GCATC 5 cut(s) 776, 1011, 1166, 2098, 2509
Sfr274I CTCGAG 1 cut(s) 665
SfuI TTCGAA 1 cut(s) 2532
SinI GGWCC 5 cut(s) 1016, 1217, 1262, 1312, 2386
SlaI CTCGAG 1 cut(s) 665
SmaI CCCGGG 1 cut(s) 783
SmiMI CAYNNNNRTG 1 cut(s) 2619
SmlI CTYRAG 6 cut(s) 385, 620, 665, 772, 1658, 2365
SmoI CTYRAG 6 cut(s) 385, 620, 665, 772, 1658, 2365
SnaBI TACGTA 1 cut(s) 2815
SsiI CCGC 4 cut(s) 323, 363, 1791, 2409
StyD4I CCNGG 8 cut(s) 318, 418, 736, 780, 781, 915, 1529, 2062
StyI CCWWGG 6 cut(s) 893, 1402, 1882, 2117, 2277, 2382
TaaI ACNGT 5 cut(s) 769, 1050, 1699, 2182, 2738
TaiI ACGT 3 cut(s) 1746, 2817, 2839
TaqI TCGA 8 cut(s) 435, 666, 870, 1064, 1604, 2393, 2532, 2578
TaqII GACCGA 1 cut(s) 1033
TatI WGTACW 4 cut(s) 176, 484, 1735, 2014
TfiI GAWTC 4 cut(s) 741, 1634, 1663, 2458
Tru1I TTAA 9 cut(s) 84, 858, 1364, 1428, 1659, 1712, 1796, 1877, 1922
Tru9I TTAA 9 cut(s) 84, 858, 1364, 1428, 1659, 1712, 1796, 1877, 1922
TscAI CASTG 5 cut(s) 83, 253, 1111, 1712, 2743
TseFI GTSAC 3 cut(s) 202, 1988, 2697
TseI GCWGC 4 cut(s) 210, 339, 2111, 2522
Tsp45I GTSAC 3 cut(s) 202, 1988, 2697
TspDTI ATGAA 6 cut(s) 843, 1117, 1409, 1448, 1463, 1531
TspGWI ACGGA 3 cut(s) 685, 1086, 2280
TspMI CCCGGG 1 cut(s) 781
TspRI CASTG 5 cut(s) 83, 253, 1111, 1712, 2743
Van91I CCANNNNNTGG 1 cut(s) 899
Vha464I CTTAAG 1 cut(s) 1658
VpaK11BI GGWCC 5 cut(s) 1016, 1217, 1262, 1312, 2386
VspI ATTAAT 1 cut(s) 1428
XbaI TCTAGA 3 cut(s) 1411, 1519, 1804
XceI RCATGY 5 cut(s) 257, 514, 2676, 2755, 2810
XhoI CTCGAG 1 cut(s) 665
XmaI CCCGGG 1 cut(s) 781
XmaJI CCTAGG 1 cut(s) 1402
XmnI GAANNNNTTC 4 cut(s) 1538, 1908, 2614, 2765
ZrmI AGTACT 3 cut(s) 178, 1737, 2016
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.