Prupe.6G281200_v2.0.a1

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000047
Physical Location & Seq
Forward (+)
26274180 .. 26277845
3666 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G281200.1

Sequence Viewer

Length: 3216 bp
ATGAAAACTCTGCTCCAATATTTCTTCCTTTTCTTCATCACTGCCATCTGTGTTAATATCATCCCTGCAGTTCACAGCCAGTGTATTAAAAACCAACAACTATCATTGCTCCAATTGAAGAAAAGCCTTACATTTTATAATGATTCATCTGGATATTCTCCACTTTCGTCAACCAAGGTCATATCATGGAATTCAAGTACAGACTGCTGCTCTTGGGTTGGTGTTACTTGCAGTACAAGTGGGCATGTTGTTGGTCTTGACATTAGCAGCGAATGCATCACGGGTGGGATTGACAATTCGAGCAGTCTCTTCGATCTCCAACATCTTCAAATCCTTAACTTGGCCAACAACAAACTTGGCAGTGTGGACCATAGCATTCCATCTGCAATCGGAAAGCTCACGGATTTGAGGTATCTAAATTTGTCCAAAACTGATTATTCAGGGCAAATTCCAATTGAGATTTCACGCCTGAAAAAGTTGGTTGTCCTTGATATTTCTAACATTTACAACTCCCTTAAGATCCCGAATTTACGCATGCTCTTTCATAATCTCACAGAGCTTACAGAGCTATATCTTGATGATGTAGATATATCAGCACAGGGGGCTCAGTGGTGCGAAGCAATATCATCTTCACTGCCAAACCTGAGGGTGTTAAGCATGTCTGGAACTAATCTCTCAGGTCCTATTGATCAATCCCTGGCTAAAATTCAGTCTTTATCCGTGATTCGATTGGATTTTAACTATATCTCCGGTCCAATACCAGCATTCTTTGCCAACTTTTCAAACCTGACCGTGTTGAGCTTGGATTTTAACAGTATCTCTGCTCCAATTCCAGGATTCTTTGCCAATTATTCAAAGTTGTCTTCCTTGAGTCTCAAATATTGTCAGTTGCAAGGATCATTTCCCAAAGAGATCTTTCAGGTACCTACTCTACAAAATATCGACCTTTCGCATAATTTGGATCTTGAAGGCTCCTTGCCAGAATTTCCAAAGAATGGATCTCTTCGATCCTTGATACTGAGATGGACAAACTTTTCAGGCTTCTTGCCCAACTCTATTGGAAACCTCAAAATGTTGTCCACGATAGATCTTTCAGGTTGCAGCTTCACTGGATCAATCCCAAAGTCAATGGAAAACCTGACAGAATTGGTTAGCCTGTACATGCCATCGCAGAGGCTTCAAGGTCCGGTAGACTTTATTCACTGGGAAAACCTTGTTAATCTGGTACATCTCCAACTGGAATTCAATCTCCTAAATGGGAGTATTCCATCATCTATTTTTTCTTCTCCCGTGTTAAAGGAACTACTACTTTCCCACAATCAATTTTCTGGTCAACTCCATGAATTTCATAACGTTTCTTCCAACTTAATTACCCTTGATTTGAGTTTCAACAATTTGGAAGGACCAATACCCGTGTCTATCTTGAGTTTTCGAGGGCTTTATACACTTGATCTTTCTTCAAACAATTTCACTCGCTTTCCTTTTAATGGTCCTCAGCAACTGAGAAATCTTTCGACCATTGATCTTTCCCACAATAGCTTGCTGGTTTTATATAATGGTTCCAGTTCCTCATCTTCCTCTTTTCCTCAAATTCAGGATATGAACTTGGCTTCTAACAAGTTGAGAACATTCCCAAATTTCTTGAGAAATCACATCTATTTAGAACGTTTGGACCTCTCAGAAAACCAGATTCAAGGCATGGTTCCCAATTGGATTTGGGGGATAAGTTCTCTTTCTCAGCTAAATCTTTCATCCAACTCCTTCTCAACTCTCGAAAGGCCTTTACCTAAAAATTCCAGTGTGTCTGCTCTCGACCTTCATTCAAACCAACTTCAGGGGCAAATCCCATTTTTCTCACCAAGTGCCCGTTATCTGGATTATTCAAAAAATTGTTTCAGCTCTAGCATACCAACTGACATTGGTGATTTCCTTGCTTCCACTGTGTTCCTCTCTCTTTCAAGCAATAACTTGCATGGGCTCATTCCAGTATCAATATGCAATGCAGGTTATGAGGTTCTTGATATGTCCAATAACTCTTTAAGTGGTATGGTTCCCCAATGCTTGACTGAAATGAAGAGTCTTAGAGTACTTATTTTAAGGAAAAACAACCTTAATGGAACTCTTTCTAACAGATTTACTGGATATTGTGGTTTAAGAGCTCTAGACCTCGGAAGGAATCAGATTAAAGGCCAGCTTCCAAAATCTCTAGCCAGTTGCACAAATTTAGAGATTCTAAACCTTGGAAACAATCAAATCATAGATACTTTTCCATGCTTCTTGAAGAGCATATCCACCTTGCGTGTCCTTGTTTTGCGATCCAACAGATTTTATGGCGGCATCGGATGTTCGAAGACCAATGGCACCTGGCAAATGCTTCAAATTGTAGACCTAGCTCACAACAACTTCAATGGTGAAATACCGGAAAGATCCTTGACAACATGGCAGGCAATGACGGCTGACGAAGATGGTTCCCGACCAAAGAGCAATGTCCTTTCATCTGAAGGGGGACAGTATACTGGAGCTGTTTATTCTTTTAAGGATGCTATAACAGTTACTAGTAAAGGTTCAGAGATGGATCTCGTAAAGATTCTAACTATCTTCACCTTGATTGACTTCTCGGACAACAAATTCAACGGATCAATACCTGAGGAAATGGGAGTATTGAAATCACTGTATATCCTCAACTTGTCCAGTAATGCCATCACAGGCGAAATCCCATCAAGCTTAGGCAACATGCGGCAACTTGAGTCCTTGGACCTGTCGCAAAACAAGCTGAGCGGGCACATTCCCCAACAGTTGACAAAGCTTACTTTCCTCGCATTCTTGAATCTCTCAAACAATCAACTGGGAGGCATGATCCCAACCAGTAATCAGTTTTCAACATTTCCACCATCCTCCTTTACAGGTAACAAAGGATTATCGGGACCTCCTTTGGACAACAAAACAGGATTGCCGCCGCCACCGCCAACACGGAATGGAAGCCTTCCGGATTCTGGATCTGGACATAATGAGATTGATTGGGATCTTATTAGCATCGAAATCGGATTTACATTTGGGTGTGCAATTGCCATTGGGTCACTTGTGTTCTGCAAGAGATGGAGTAAATGGTATTACAGAGCCATGTATAGCATCCTTGTCAAGATATTCCCTCAGCTGGAGGAAAGACTTGGTAACCATAGAAGACATGTTCACATAAATCAAAGGTGGAGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1072

Amino Acids

118.5

Weight (kDa)

7.27

Isoelectric Point (pI)

43.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 138
Acc36I ACCTGC 1 cut(s) 1994
Acc65I GGTACC 1 cut(s) 922
AccB1I GGYRCC 2 cut(s) 922, 2360
AccB7I CCANNNNNTGG 1 cut(s) 995
AccBSI CCGCTC 1 cut(s) 2778
AccI GTMKAC 3 cut(s) 1191, 2385, 2513
AccIII TCCGGA 1 cut(s) 2986
AciI CCGC 6 cut(s) 2334, 2737, 2778, 2954, 2957, 2963
AclI AACGTT 2 cut(s) 1353, 1666
AcoI YGGCCR 1 cut(s) 342
AcuI CTGAAG 2 cut(s) 1817, 2520
AdeI CACNNNGTG 1 cut(s) 1862
AfaI GTAC 6 cut(s) 199, 235, 924, 1160, 1227, 2088
AfiI CCNNNNNNNGG 8 cut(s) 340, 833, 995, 1487, 1834, 1873, 2993, 3154
AflII CTTAAG 1 cut(s) 515
AflIII ACRYGT 1 cut(s) 3184
AhlI ACTAGT 1 cut(s) 2555
AjnI CCWGG 3 cut(s) 696, 832, 2363
AjuI GAANNNNNNNTTGG 2 cut(s) 445, 477
Alw21I GWGCWC 1 cut(s) 2161
Alw26I GTCTC 3 cut(s) 311, 878, 3202
AlwNI CAGNNNCTG 1 cut(s) 1501
Aor13HI TCCGGA 1 cut(s) 2986
AoxI GGCC 3 cut(s) 342, 1778, 2188
ApeKI GCWGC 3 cut(s) 207, 267, 1101
Asp700I GAANNNNTTC 2 cut(s) 1510, 2122
Asp718I GGTACC 1 cut(s) 922
AspS9I GGNCC 9 cut(s) 367, 680, 752, 1184, 1403, 1490, 1672, 2755, 2924
AsuHPI GGTGA 4 cut(s) 1848, 1934, 2423, 2593
AsuII TTCGAA 1 cut(s) 2348
AvaII GGWCC 9 cut(s) 367, 680, 752, 1184, 1403, 1490, 1672, 2755, 2924
AxyI CCTNAGG 2 cut(s) 644, 2646
BaeGI GKGCMC 2 cut(s) 1867, 2784
BalI TGGCCA 1 cut(s) 344
BanI GGYRCC 2 cut(s) 922, 2360
BanII GRGCYC 3 cut(s) 607, 1980, 2161
BarI GAAGNNNNNNTAC 2 cut(s) 1392, 1424
BbsI GAAGAC 3 cut(s) 855, 2357, 3187
Bbv12I GWGCWC 1 cut(s) 2161
BbvCI CCTCAGC 2 cut(s) 1494, 3150
BbvI GCAGC 3 cut(s) 194, 279, 1113
BceAI ACGGC 1 cut(s) 2469
BcgI CGANNNNNNTGC 4 cut(s) 292, 326, 3022, 3056
BciT130I CCWGG 3 cut(s) 698, 834, 2365
BclI TGATCA 1 cut(s) 688
BcoDI GTCTC 3 cut(s) 311, 878, 3202
BcuI ACTAGT 1 cut(s) 2555
BfaI CTAG 5 cut(s) 1902, 2162, 2207, 2390, 2556
BfmI CTRYAG 1 cut(s) 66
BfrI CTTAAG 1 cut(s) 515
BfuAI ACCTGC 1 cut(s) 1994
BglII AGATCT 2 cut(s) 912, 1087
BisI GCNGC 7 cut(s) 208, 268, 1102, 2335, 2738, 2954, 2957
BlpI GCTNAGC 1 cut(s) 2774
BlsI GCNGC 7 cut(s) 209, 269, 1103, 2336, 2739, 2955, 2958
BmcAI AGTACT 1 cut(s) 2088
Bme1390I CCNGG 3 cut(s) 698, 834, 2365
Bme18I GGWCC 9 cut(s) 367, 680, 752, 1184, 1403, 1490, 1672, 2755, 2924
BmgT120I GGNCC 9 cut(s) 367, 680, 752, 1184, 1403, 1490, 1672, 2755, 2924
BmiI GGNNCC 8 cut(s) 924, 973, 1561, 1704, 2052, 2362, 2470, 2925
BmrFI CCNGG 3 cut(s) 698, 834, 2365
BmrI ACTGGG 2 cut(s) 1213, 2855
BmsI GCATC 5 cut(s) 285, 2346, 2530, 3042, 3138
BmuI ACTGGG 2 cut(s) 1213, 2855
BpiI GAAGAC 3 cut(s) 855, 2357, 3187
BpmI CTGGAG 2 cut(s) 2538, 3176
Bpu10I CCTNAGC 3 cut(s) 1494, 2725, 3150
Bpu1102I GCTNAGC 1 cut(s) 2774
Bpu14I TTCGAA 1 cut(s) 2348
BpuEI CTTGAG 4 cut(s) 889, 1444, 1663, 2765
BsaBI GATNNNNATC 1 cut(s) 3021
BsaJI CCNNGG 5 cut(s) 174, 696, 2167, 2239, 2751
BsaWI WCCGGW 4 cut(s) 749, 1186, 2419, 2986
BsaXI ACNNNNNCTCC 2 cut(s) 731, 761
Bsc4I CCNNNNNNNGG 8 cut(s) 340, 833, 995, 1487, 1834, 1873, 2993, 3154
Bse21I CCTNAGG 2 cut(s) 644, 2646
Bse3DI GCAATG 4 cut(s) 104, 2005, 2454, 2491
Bse8I GATNNNNATC 1 cut(s) 3021
BseAI TCCGGA 1 cut(s) 2986
BseBI CCWGG 3 cut(s) 698, 834, 2365
BseDI CCNNGG 5 cut(s) 174, 696, 2167, 2239, 2751
BseGI GGATG 6 cut(s) 60, 1751, 2348, 2545, 2891, 3129
BseJI GATNNNNATC 1 cut(s) 3021
BseLI CCNNNNNNNGG 8 cut(s) 340, 833, 995, 1487, 1834, 1873, 2993, 3154
BseMI GCAATG 4 cut(s) 104, 2005, 2454, 2491
BseSI GKGCMC 2 cut(s) 1867, 2784
BseXI GCAGC 3 cut(s) 194, 279, 1113
BshFI GGCC 3 cut(s) 344, 1780, 2190
BshNI GGYRCC 2 cut(s) 922, 2360
BsiHKAI GWGCWC 1 cut(s) 2161
BsiSI CCGG 4 cut(s) 750, 1187, 2420, 2987
BslFI GGGAC 2 cut(s) 2520, 2937
BslI CCNNNNNNNGG 8 cut(s) 340, 833, 995, 1487, 1834, 1873, 2993, 3154
BsmAI GTCTC 3 cut(s) 311, 878, 3202
BsmBI CGTCTC 1 cut(s) 3202
BsmFI GGGAC 2 cut(s) 2520, 2937
BsmI GAATGC 4 cut(s) 278, 375, 764, 2819
BsnI GGCC 3 cut(s) 344, 1780, 2190
Bsp119I TTCGAA 1 cut(s) 2348
Bsp1286I GDGCHC 5 cut(s) 607, 1867, 1980, 2161, 2784
Bsp13I TCCGGA 1 cut(s) 2986
Bsp1407I TGTACA 1 cut(s) 1158
Bsp1720I GCTNAGC 1 cut(s) 2774
BspACI CCGC 6 cut(s) 2334, 2737, 2778, 2954, 2957, 2963
BspANI GGCC 3 cut(s) 344, 1780, 2190
BspEI TCCGGA 1 cut(s) 2986
BspLI GGNNCC 8 cut(s) 924, 973, 1561, 1704, 2052, 2362, 2470, 2925
BspMAI CTGCAG 1 cut(s) 70
BspMI ACCTGC 1 cut(s) 1994
BspQI GCTCTTC 1 cut(s) 2276
BspT104I TTCGAA 1 cut(s) 2348
BspT107I GGYRCC 2 cut(s) 922, 2360
BspTI CTTAAG 1 cut(s) 515
BsrBI CCGCTC 1 cut(s) 2778
BsrDI GCAATG 4 cut(s) 104, 2005, 2454, 2491
BsrGI TGTACA 1 cut(s) 1158
BssECI CCNNGG 5 cut(s) 174, 696, 2167, 2239, 2751
BssNAI GTATAC 1 cut(s) 2514
BssT1I CCWWGG 3 cut(s) 174, 2239, 2751
Bst1107I GTATAC 1 cut(s) 2514
Bst2UI CCWGG 3 cut(s) 698, 834, 2365
Bst4CI ACNGT 7 cut(s) 793, 815, 1942, 2511, 2551, 2673, 2796
Bst6I CTCTTC 4 cut(s) 314, 1008, 2069, 2276
BstAFI CTTAAG 1 cut(s) 515
BstAPI GCANNNNNTGC 2 cut(s) 273, 770
BstAUI TGTACA 1 cut(s) 1158
BstBI TTCGAA 1 cut(s) 2348
BstC8I GCNNGC 5 cut(s) 536, 1541, 2192, 2445, 2780
BstEII GGTNACC 1 cut(s) 3170
BstF5I GGATG 6 cut(s) 60, 1751, 2348, 2545, 2891, 3129
BstMAI GTCTC 3 cut(s) 311, 878, 3202
BstMWI GCNNNNNNNGC 8 cut(s) 273, 565, 602, 770, 2453, 2770, 2779, 2962
BstNI CCWGG 3 cut(s) 698, 834, 2365
BstNSI RCATGY 6 cut(s) 248, 538, 661, 1165, 2737, 3188
BstPI GGTNACC 1 cut(s) 3170
BstSCI CCNGG 3 cut(s) 696, 832, 2363
BstSFI CTRYAG 1 cut(s) 66
BstSLI GKGCMC 2 cut(s) 1867, 2784
BstV1I GCAGC 3 cut(s) 194, 279, 1113
BstV2I GAAGAC 3 cut(s) 855, 2357, 3187
BstX2I RGATCY 9 cut(s) 519, 912, 961, 998, 1087, 2426, 2575, 2996, 3022
BstYI RGATCY 9 cut(s) 519, 912, 961, 998, 1087, 2426, 2575, 2996, 3022
BstZ17I GTATAC 1 cut(s) 2514
Bsu36I CCTNAGG 2 cut(s) 644, 2646
BsuRI GGCC 3 cut(s) 344, 1780, 2190
BtgZI GCGATG 1 cut(s) 1152
BtsCI GGATG 6 cut(s) 60, 1751, 2348, 2545, 2891, 3129
BtsI GCAGTG 3 cut(s) 39, 367, 632
BveI ACCTGC 1 cut(s) 1994
Cac8I GCNNGC 5 cut(s) 536, 1541, 2192, 2445, 2780
CaiI CAGNNNCTG 1 cut(s) 1501
Cfr13I GGNCC 9 cut(s) 367, 680, 752, 1184, 1403, 1490, 1672, 2755, 2924
Csp6I GTAC 6 cut(s) 198, 234, 923, 1159, 1226, 2087
CviQI GTAC 6 cut(s) 198, 234, 923, 1159, 1226, 2087
DraIII CACNNNGTG 1 cut(s) 1862
EaeI YGGCCR 1 cut(s) 342
Eam1104I CTCTTC 4 cut(s) 314, 1008, 2069, 2276
EarI CTCTTC 4 cut(s) 314, 1008, 2069, 2276
Ecl136II GAGCTC 1 cut(s) 2159
Eco130I CCWWGG 3 cut(s) 174, 2239, 2751
Eco147I AGGCCT 1 cut(s) 1780
Eco24I GRGCYC 3 cut(s) 607, 1980, 2161
Eco47I GGWCC 9 cut(s) 367, 680, 752, 1184, 1403, 1490, 1672, 2755, 2924
Eco53kI GAGCTC 1 cut(s) 2159
Eco57I CTGAAG 2 cut(s) 1817, 2520
Eco81I CCTNAGG 2 cut(s) 644, 2646
Eco91I GGTNACC 1 cut(s) 3170
EcoICRI GAGCTC 1 cut(s) 2159
EcoO109I RGGNCCY 2 cut(s) 680, 2924
EcoO65I GGTNACC 1 cut(s) 3170
EcoRI GAATTC 2 cut(s) 190, 1241
EcoRII CCWGG 3 cut(s) 696, 832, 2363
EcoT14I CCWWGG 3 cut(s) 174, 2239, 2751
EcoT22I ATGCAT 1 cut(s) 278
EcoT38I GRGCYC 3 cut(s) 607, 1980, 2161
ErhI CCWWGG 3 cut(s) 174, 2239, 2751
Esp3I CGTCTC 1 cut(s) 3202
FalI AAGNNNNNCTT 2 cut(s) 2178, 2210
FaqI GGGAC 2 cut(s) 2520, 2937
FauI CCCGC 1 cut(s) 2771
FbaI TGATCA 1 cut(s) 688
FblI GTMKAC 3 cut(s) 1191, 2385, 2513
Fnu4HI GCNGC 7 cut(s) 208, 268, 1102, 2335, 2738, 2954, 2957
FokI GGATG 6 cut(s) 47, 1738, 2355, 2552, 2878, 3116
FriOI GRGCYC 3 cut(s) 607, 1980, 2161
Fsp4HI GCNGC 7 cut(s) 208, 268, 1102, 2335, 2738, 2954, 2957
FspBI CTAG 5 cut(s) 1902, 2162, 2207, 2390, 2556
GluI GCNGC 7 cut(s) 208, 268, 1102, 2335, 2738, 2954, 2957
GsuI CTGGAG 2 cut(s) 2538, 3176
HaeIII GGCC 3 cut(s) 344, 1780, 2190
HapII CCGG 4 cut(s) 750, 1187, 2420, 2987
HincII GTYRAC 3 cut(s) 171, 1334, 2799
HindII GTYRAC 3 cut(s) 171, 1334, 2799
HindIII AAGCTT 2 cut(s) 2722, 2804
HpaII CCGG 4 cut(s) 750, 1187, 2420, 2987
HphI GGTGA 4 cut(s) 1848, 1934, 2423, 2593
Hpy188I TCNGA 9 cut(s) 392, 1681, 2171, 2181, 2342, 2500, 2569, 2620, 3044
HpyAV CCTTC 7 cut(s) 962, 1394, 1771, 1826, 2166, 2495, 2993
HpyCH4III ACNGT 7 cut(s) 793, 815, 1942, 2511, 2551, 2673, 2796
HpyCH4IV ACGT 3 cut(s) 1353, 1666, 3211
HpyF10VI GCNNNNNNNGC 8 cut(s) 273, 565, 602, 770, 2453, 2770, 2779, 2962
HpySE526I ACGT 3 cut(s) 1353, 1666, 3211
Kpn2I TCCGGA 1 cut(s) 2986
KpnI GGTACC 1 cut(s) 926
Ksp22I TGATCA 1 cut(s) 688
LguI GCTCTTC 1 cut(s) 2276
LmnI GCTCC 5 cut(s) 18, 114, 829, 977, 2519
Lsp1109I GCAGC 3 cut(s) 194, 279, 1113
LweI GCATC 5 cut(s) 285, 2346, 2530, 3042, 3138
MaeI CTAG 5 cut(s) 1902, 2162, 2207, 2390, 2556
MaeII ACGT 3 cut(s) 1353, 1666, 3211
MaeIII GTNAC 5 cut(s) 223, 2551, 2906, 3075, 3170
MbiI CCGCTC 1 cut(s) 2778
MfeI CAATTG 4 cut(s) 113, 453, 1708, 3063
MflI RGATCY 9 cut(s) 519, 912, 961, 998, 1087, 2426, 2575, 2996, 3022
MhlI GDGCHC 5 cut(s) 607, 1867, 1980, 2161, 2784
MlsI TGGCCA 1 cut(s) 344
MluNI TGGCCA 1 cut(s) 344
MlyI GAGTC 3 cut(s) 880, 2086, 2756
MmeI TCCRAC 5 cut(s) 343, 1258, 1386, 1779, 2343
Mox20I TGGCCA 1 cut(s) 344
Mph1103I ATGCAT 1 cut(s) 278
MroI TCCGGA 1 cut(s) 2986
MroXI GAANNNNTTC 2 cut(s) 1510, 2122
MscI TGGCCA 1 cut(s) 344
MslI CAYNNNNRTG 1 cut(s) 3055
Msp20I TGGCCA 1 cut(s) 344
MspA1I CMGCKG 1 cut(s) 3154
MspCI CTTAAG 1 cut(s) 515
MspI CCGG 4 cut(s) 750, 1187, 2420, 2987
MspR9I CCNGG 3 cut(s) 698, 834, 2365
MunI CAATTG 4 cut(s) 113, 453, 1708, 3063
Mva1269I GAATGC 4 cut(s) 278, 375, 764, 2819
MvaI CCWGG 3 cut(s) 698, 834, 2365
MwoI GCNNNNNNNGC 8 cut(s) 273, 565, 602, 770, 2453, 2770, 2779, 2962
NlaIV GGNNCC 8 cut(s) 924, 973, 1561, 1704, 2052, 2362, 2470, 2925
NmuCI GTSAC 1 cut(s) 3075
NsiI ATGCAT 1 cut(s) 278
NspI RCATGY 6 cut(s) 248, 538, 661, 1165, 2737, 3188
NspV TTCGAA 1 cut(s) 2348
PaeI GCATGC 1 cut(s) 538
PceI AGGCCT 1 cut(s) 1780
PciI ACATGT 1 cut(s) 3184
PciSI GCTCTTC 1 cut(s) 2276
PctI GAATGC 4 cut(s) 278, 375, 764, 2819
PdmI GAANNNNTTC 2 cut(s) 1510, 2122
PfeI GAWTC 9 cut(s) 143, 724, 837, 1690, 2176, 2230, 2587, 2827, 2990
PflMI CCANNNNNTGG 1 cut(s) 995
PfoI TCCNGGA 1 cut(s) 832
PkrI GCNGC 7 cut(s) 209, 269, 1103, 2336, 2739, 2955, 2958
PleI GAGTC 3 cut(s) 879, 2085, 2755
PpsI GAGTC 3 cut(s) 879, 2085, 2755
PpuMI RGGWCCY 2 cut(s) 680, 2924
PscI ACATGT 1 cut(s) 3184
PsiI TTATAA 1 cut(s) 138
Psp124BI GAGCTC 1 cut(s) 2161
Psp1406I AACGTT 2 cut(s) 1353, 1666
Psp5II RGGWCCY 2 cut(s) 680, 2924
Psp6I CCWGG 3 cut(s) 696, 832, 2363
PspEI GGTNACC 1 cut(s) 3170
PspGI CCWGG 3 cut(s) 696, 832, 2363
PspN4I GGNNCC 8 cut(s) 924, 973, 1561, 1704, 2052, 2362, 2470, 2925
PspPI GGNCC 9 cut(s) 367, 680, 752, 1184, 1403, 1490, 1672, 2755, 2924
PspPPI RGGWCCY 2 cut(s) 680, 2924
PstI CTGCAG 1 cut(s) 70
PstNI CAGNNNCTG 1 cut(s) 1501
PsuI RGATCY 9 cut(s) 519, 912, 961, 998, 1087, 2426, 2575, 2996, 3022
PvuII CAGCTG 1 cut(s) 3154
RsaI GTAC 6 cut(s) 199, 235, 924, 1160, 1227, 2088
RsaNI GTAC 6 cut(s) 198, 234, 923, 1159, 1226, 2087
RseI CAYNNNNRTG 1 cut(s) 3055
SacI GAGCTC 1 cut(s) 2161
SapI GCTCTTC 1 cut(s) 2276
SatI GCNGC 7 cut(s) 208, 268, 1102, 2335, 2738, 2954, 2957
Sau96I GGNCC 9 cut(s) 367, 680, 752, 1184, 1403, 1490, 1672, 2755, 2924
ScaI AGTACT 1 cut(s) 2088
SchI GAGTC 3 cut(s) 880, 2086, 2756
ScrFI CCNGG 3 cut(s) 698, 834, 2365
SduI GDGCHC 5 cut(s) 607, 1867, 1980, 2161, 2784
SfaNI GCATC 5 cut(s) 285, 2346, 2530, 3042, 3138
SfcI CTRYAG 1 cut(s) 66
SfuI TTCGAA 1 cut(s) 2348
SinI GGWCC 9 cut(s) 367, 680, 752, 1184, 1403, 1490, 1672, 2755, 2924
SmiMI CAYNNNNRTG 1 cut(s) 3055
SmlI CTYRAG 5 cut(s) 515, 868, 1423, 1642, 2744
SmoI CTYRAG 5 cut(s) 515, 868, 1423, 1642, 2744
SpeI ACTAGT 1 cut(s) 2555
SphI GCATGC 1 cut(s) 538
SseBI AGGCCT 1 cut(s) 1780
SsiI CCGC 6 cut(s) 2334, 2737, 2778, 2954, 2957, 2963
SspI AATATT 2 cut(s) 20, 881
SspMI CTAG 5 cut(s) 1902, 2162, 2207, 2390, 2556
SstI GAGCTC 1 cut(s) 2161
StuI AGGCCT 1 cut(s) 1780
StyD4I CCNGG 3 cut(s) 696, 832, 2363
StyI CCWWGG 3 cut(s) 174, 2239, 2751
TaaI ACNGT 7 cut(s) 793, 815, 1942, 2511, 2551, 2673, 2796
TaiI ACGT 3 cut(s) 1356, 1669, 3214
TatI WGTACW 4 cut(s) 197, 233, 1158, 2086
TauI GCSGC 4 cut(s) 2337, 2740, 2956, 2959
TfiI GAWTC 9 cut(s) 143, 724, 837, 1690, 2176, 2230, 2587, 2827, 2990
TseFI GTSAC 1 cut(s) 3075
TseI GCWGC 3 cut(s) 207, 267, 1101
Tsp45I GTSAC 1 cut(s) 3075
TspGWI ACGGA 4 cut(s) 416, 709, 2649, 2986
Van91I CCANNNNNTGG 1 cut(s) 995
Vha464I CTTAAG 1 cut(s) 515
VpaK11BI GGWCC 9 cut(s) 367, 680, 752, 1184, 1403, 1490, 1672, 2755, 2924
XbaI TCTAGA 1 cut(s) 2161
XceI RCATGY 6 cut(s) 248, 538, 661, 1165, 2737, 3188
XmiI GTMKAC 3 cut(s) 1191, 2385, 2513
XmnI GAANNNNTTC 2 cut(s) 1510, 2122
XspI CTAG 5 cut(s) 1902, 2162, 2207, 2390, 2556
ZrmI AGTACT 1 cut(s) 2088
Zsp2I ATGCAT 1 cut(s) 278
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.