Rw1G020590

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000047
Physical Location & Seq
Forward (+)
44200625 .. 44203561
2937 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G020590.1

Sequence Viewer

Length: 2262 bp
ATGAAAACTTTGCTACATTTCTTCCTCTTCTTGATCACACTCTGGGTCAGTATCATCATCCCAGCAGTTCACAGCCAGTGTATTAAAGACCAGCAACTATCACTGCTCCAATTCAAGAAAAGCCTTGTGTTCTATGATATTTCCATATATTCACTTACCAGGCTTATTTCTTGGAATGCAAGTACTGATTGTTGTTCTTGGGAGGGCGTCACTTGCAGCCGTAGTGGGCGTATCCGTGGTGGAATTGACAATTCCAGCAGTCTCTTCCATCTTCATTATCTTCAAAGCCTCAATCTGGCGGACAACCTACTTGGCAGTAACTCTCAATCAATTCCATCCGCAATCGGAAATCTCCTGAACTTGAGGTATCTGAATTTATCTCTTAATGATTATTCAGGGCAAATTCCCATCGAGATTTCTCGCTTGAGGAGGTTGGAAGTCCTTGATTTTTCTAACAATTGGGGCCATAACCTTAGAAGTTCAAATTTACACATGTTGGTTCAAAACTTCACAGAGCTTAGAGAGTTATATCTTGATTGGGTCCGAATATCAGAACAGGGGAGTGAGTGGTGCCGAGCCGTATCATCTTCCCTTCCCAACCTCAGGGTCTTGAGCATGTCTGCTTGTGATCTTTCAGGCCCTCTTCTCGAGTCCCTTGCTAAGCTTCAGTCTCTATCTGTAATTAGGTTGGACATGAACAATTTCCCTGCGCCAGTTCCAGGATTCTTTGCCAACTTTTCAAACTTGACTGTCTTGAGTCTTATAGAGTGCGGGTTGCATGGAACATTTCCGAAAGAGATCTTTCACATCTCTTTTTTCTCTTCCCCTTTTGGAAGATCTAGATCTTTCCAGCAATCAATTCTCTGTTTGGAACTCTCAGATAACCAGATAACTGGCAAGATACCCAACTGGATTTGGAGTTCAAGTTATCTCAGTTTCCTAAATCTTTCTTGTAACTCCCTAGATTCTTTAGAAGTTCATTCAATCAATCCCACTGCTCTATATTACCTTGACCTTCATTCCAACCAGTTTCGCGGACAAATCCCAATTTTTCCATCACCTCACAGAGTCGATTATCTAGATTTCTCCAAGAATTATTTCAGCTCTATCATACCGAGTACCATTGGAGATGTGTTCCTCAACACAATATTTTTCTCGCTTTCGAGCAATAACCTCAATGGGATCATTCCAAAATCATTATGCAATTCACAATTTCTTGAGGTTCTTGATCTGTCCAATAATTCTTTGAGTGGCACAGTTCCCCAATGCTTAACTACAATGAGGAGTCTTGCAGTACTCAACGTAAGGAGAAACAATCTTACAAATGTTGAGGACTTCTCTCAGAATTGCCGGTTAAAAACTCTAGACATCAGTGAAAATCACCTTCAAGGCCGGTTTCTGAAATCTCTTGTCAACTGCACCCAGTTAGAGATTTTAAACCTTGGAAACAATTTGATAACAGAACCATTTCCATGCTTTTTAAGGAACACATCCACCTTGCGTATCCTTGTCTTGCGATCCAATAAATTTTATGGGCACATTGGATGTTGCAAGACTAATGGCACTTGGCCAGTACTTCAAATCATAGACTTAGCTCACAACAATTTTAGTGGTGAAGTACCTGGAACAGCTCTGGCAACTTGGCAGGCCATGAGGAATAGCAAAGATGATAATATCAATAGCCTTAAATGGAGTGCAGGGGAAATTGGAGAACTCAAATCATTGTATGCCCTCAACTTGTCCAACAATGCTTTCACAGGTGCAGTTCCATCATCACTAAGTAACTTGAGTCAGCTAGAGTCCTTGGACCTCTCGAAAAACAAACTGAGCGGTCAAATCCCACCGGAGCTTACAAAACTCACTTTCCTTGCATTCTTGAATCTCTCAGATAATCAATTGGTCGGGAGGATACCAAGCGGTGCTCAATTTTCAACATTTGATGCAGCTTCTTTCGAAGGTAATAAAGGATTATGGGGGCCTCCTTTGACAGCAGATAATCGAACAGTGTTCTCATCACCAAAGCTAGAAGGAAACCATTCAAATGCTAGACATGAGATTGATTGGGATATTATCTGTCCTGAAATTGGGTTTACATGTGGGTTTGGGATTGTCATCGGGTCACTTTTGTTTTGCAAGAGATGGAGGAAATGGTATTACAGTGCTATGTATAACATGCTTCTGAAGATATTCCCTCAGTTGGAACAAAGATTTGGTCATCACAGGAGACATGTTTACGTACATCAAAGATACTGGAGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

753

Amino Acids

85.06

Weight (kDa)

8.52

Isoelectric Point (pI)

46.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 29 - 73 2.9e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 82 - 347 4e-13 Leucine-rich repeat region
LRR_8 PF13855 386 - 440 4.1e-06 Leucine rich repeat
LRR_8 PF13855 574 - 633 2.3e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 570
AccBSI CCGCTC 1 cut(s) 1830
AccII CGCG 1 cut(s) 1035
AciI CCGC 6 cut(s) 299, 339, 771, 1035, 1830, 1917
AclWI GGATC 2 cut(s) 1190, 1512
AcoI YGGCCR 1 cut(s) 1568
AcsI RAATTY 4 cut(s) 373, 402, 484, 1526
AcuI CTGAAG 2 cut(s) 650, 2201
AcyI GRCGYC 1 cut(s) 207
AfaI GTAC 6 cut(s) 184, 1120, 1296, 1575, 1620, 2238
AfiI CCNNNNNNNGG 5 cut(s) 295, 603, 719, 2084, 2197
AflIII ACRYGT 3 cut(s) 492, 2093, 2227
AjnI CCWGG 3 cut(s) 158, 718, 1621
AjuI GAANNNNNNNTTGG 6 cut(s) 1082, 1114, 1736, 1768, 2193, 2225
AloI GAACNNNNNNTCC 2 cut(s) 904, 936
AluBI AGCT 9 cut(s) 517, 664, 1104, 1595, 1631, 1795, 1849, 1946, 2023
AluI AGCT 9 cut(s) 517, 664, 1104, 1595, 1631, 1795, 1849, 1946, 2023
Alw21I GWGCWC 1 cut(s) 1924
Alw26I GTCTC 4 cut(s) 266, 675, 2218, 2248
AlwI GGATC 2 cut(s) 1190, 1512
Ama87I CYCGRG 1 cut(s) 647
AoxI GGCC 6 cut(s) 463, 637, 1390, 1568, 1647, 1976
ApeKI GCWGC 2 cut(s) 216, 1943
ApoI RAATTY 4 cut(s) 373, 402, 484, 1526
ArsI GACNNNNNNTTYG 2 cut(s) 2197, 2229
Asp700I GAANNNNTTC 5 cut(s) 701, 1097, 1467, 2035, 2186
AspLEI GCGC 1 cut(s) 712
AspS9I GGNCC 5 cut(s) 463, 541, 638, 1807, 1976
AsuHPI GGTGA 4 cut(s) 1050, 1373, 1625, 2007
AsuII TTCGAA 1 cut(s) 1953
AvaI CYCGRG 1 cut(s) 647
AvaII GGWCC 2 cut(s) 541, 1807
AxyI CCTNAGG 1 cut(s) 602
BaeGI GKGCMC 1 cut(s) 1539
BalI TGGCCA 1 cut(s) 1570
BanI GGYRCC 1 cut(s) 570
Bbv12I GWGCWC 1 cut(s) 1924
BbvI GCAGC 2 cut(s) 228, 1955
BccI CCATC 6 cut(s) 276, 343, 416, 1063, 1777, 2133
BceAI ACGGC 2 cut(s) 204, 563
BcgI CGANNNNNNTGC 2 cut(s) 638, 672
BciT130I CCWGG 3 cut(s) 160, 720, 1623
BciVI GTATCC 3 cut(s) 242, 1514, 1902
BclI TGATCA 1 cut(s) 33
BcoDI GTCTC 4 cut(s) 266, 675, 2218, 2248
BfaI CTAG 7 cut(s) 840, 962, 1079, 1364, 1796, 2024, 2046
BfuI GTATCC 3 cut(s) 242, 1514, 1902
BglII AGATCT 3 cut(s) 798, 836, 842
BisI GCNGC 2 cut(s) 217, 1944
BlpI GCTNAGC 1 cut(s) 660
BlsI GCNGC 2 cut(s) 218, 1945
BmcAI AGTACT 3 cut(s) 184, 1296, 1575
Bme1390I CCNGG 3 cut(s) 160, 720, 1623
Bme18I GGWCC 2 cut(s) 541, 1807
BmeT110I CYCGRG 1 cut(s) 647
BmgT120I GGNCC 5 cut(s) 463, 541, 638, 1807, 1976
BmiI GGNNCC 4 cut(s) 464, 542, 572, 1977
BmrFI CCNGG 3 cut(s) 160, 720, 1623
BmrI ACTGGG 1 cut(s) 1417
BmsI GCATC 1 cut(s) 1930
BmuI ACTGGG 1 cut(s) 1417
BplI GAGNNNNNCTC 2 cut(s) 1322, 1354
Bpu1102I GCTNAGC 1 cut(s) 660
Bpu14I TTCGAA 1 cut(s) 1953
BpuEI CTTGAG 6 cut(s) 382, 445, 631, 775, 1238, 1807
BsaAI YACGTR 1 cut(s) 2236
BsaBI GATNNNNATC 2 cut(s) 841, 2111
BsaHI GRCGYC 1 cut(s) 207
BsaJI CCNNGG 3 cut(s) 235, 1441, 1803
BsaWI WCCGGW 1 cut(s) 1843
BsaXI ACNNNNNCTCC 2 cut(s) 910, 940
Bsc4I CCNNNNNNNGG 5 cut(s) 295, 603, 719, 2084, 2197
Bse118I RCCGGY 2 cut(s) 1350, 1392
Bse1I ACTGG 8 cut(s) 76, 713, 898, 914, 1027, 1423, 1571, 2255
Bse21I CCTNAGG 1 cut(s) 602
Bse8I GATNNNNATC 2 cut(s) 841, 2111
BseBI CCWGG 3 cut(s) 160, 720, 1623
BseDI CCNNGG 3 cut(s) 235, 1441, 1803
BseGI GGATG 4 cut(s) 57, 335, 1490, 1550
BseJI GATNNNNATC 2 cut(s) 841, 2111
BseLI CCNNNNNNNGG 5 cut(s) 295, 603, 719, 2084, 2197
BseMII CTCAG 7 cut(s) 616, 891, 946, 1355, 1817, 1899, 2207
BseNI ACTGG 8 cut(s) 76, 713, 898, 914, 1027, 1423, 1571, 2255
BseRI GAGGAG 2 cut(s) 442, 1297
BseSI GKGCMC 1 cut(s) 1539
BseXI GCAGC 2 cut(s) 228, 1955
BseYI CCCAGC 1 cut(s) 61
BsgI GTGCAG 3 cut(s) 1402, 1716, 1782
Bsh1236I CGCG 1 cut(s) 1035
BshFI GGCC 6 cut(s) 465, 639, 1392, 1570, 1649, 1978
BshNI GGYRCC 1 cut(s) 570
BsiHKAI GWGCWC 1 cut(s) 1924
BsiHKCI CYCGRG 1 cut(s) 647
BsiSI CCGG 3 cut(s) 1351, 1393, 1844
BslFI GGGAC 1 cut(s) 637
BslI CCNNNNNNNGG 5 cut(s) 295, 603, 719, 2084, 2197
BsmAI GTCTC 4 cut(s) 266, 675, 2218, 2248
BsmBI CGTCTC 1 cut(s) 2248
BsmFI GGGAC 1 cut(s) 637
BsmI GAATGC 2 cut(s) 181, 1871
BsnI GGCC 6 cut(s) 465, 639, 1392, 1570, 1649, 1978
BsoBI CYCGRG 1 cut(s) 647
Bsp119I TTCGAA 1 cut(s) 1953
Bsp1286I GDGCHC 2 cut(s) 1539, 1924
Bsp143I GATC 8 cut(s) 33, 628, 798, 836, 842, 1182, 1228, 1517
Bsp1720I GCTNAGC 1 cut(s) 660
BspACI CCGC 6 cut(s) 299, 339, 771, 1035, 1830, 1917
BspANI GGCC 6 cut(s) 465, 639, 1392, 1570, 1649, 1978
BspCNI CTCAG 7 cut(s) 615, 890, 945, 1354, 1818, 1898, 2206
BspFNI CGCG 1 cut(s) 1035
BspLI GGNNCC 4 cut(s) 464, 542, 572, 1977
BspPI GGATC 2 cut(s) 1190, 1512
BspT104I TTCGAA 1 cut(s) 1953
BspT107I GGYRCC 1 cut(s) 570
BsrBI CCGCTC 1 cut(s) 1830
BsrFI RCCGGY 2 cut(s) 1350, 1392
BsrI ACTGG 8 cut(s) 76, 713, 898, 914, 1027, 1423, 1571, 2255
BssAI RCCGGY 2 cut(s) 1350, 1392
BssECI CCNNGG 3 cut(s) 235, 1441, 1803
BssMI GATC 8 cut(s) 33, 628, 798, 836, 842, 1182, 1228, 1517
BssNI GRCGYC 1 cut(s) 207
BssT1I CCWWGG 2 cut(s) 1441, 1803
Bst2UI CCWGG 3 cut(s) 160, 720, 1623
Bst4CI ACNGT 4 cut(s) 751, 1258, 2005, 2159
Bst6I CTCTTC 4 cut(s) 32, 269, 648, 826
BstACI GRCGYC 1 cut(s) 207
BstBAI YACGTR 1 cut(s) 2236
BstBI TTCGAA 1 cut(s) 1953
BstC8I GCNNGC 1 cut(s) 1647
BstDSI CCRYGG 1 cut(s) 235
BstF5I GGATG 4 cut(s) 57, 335, 1490, 1550
BstFNI CGCG 1 cut(s) 1035
BstHHI GCGC 1 cut(s) 712
BstKTI GATC 8 cut(s) 36, 631, 801, 839, 845, 1185, 1231, 1520
BstMAI GTCTC 4 cut(s) 266, 675, 2218, 2248
BstMBI GATC 8 cut(s) 33, 628, 798, 836, 842, 1182, 1228, 1517
BstMWI GCNNNNNNNGC 1 cut(s) 213
BstNI CCWGG 3 cut(s) 160, 720, 1623
BstNSI RCATGY 5 cut(s) 496, 619, 2097, 2176, 2231
BstSCI CCNGG 3 cut(s) 158, 718, 1621
BstSLI GKGCMC 1 cut(s) 1539
BstSNI TACGTA 1 cut(s) 2236
BstUI CGCG 1 cut(s) 1035
BstV1I GCAGC 2 cut(s) 228, 1955
BstX2I RGATCY 3 cut(s) 798, 836, 842
BstXI CCANNNNNNTGG 1 cut(s) 893
BstYI RGATCY 3 cut(s) 798, 836, 842
Bsu36I CCTNAGG 1 cut(s) 602
BsuI GTATCC 3 cut(s) 242, 1514, 1902
BsuRI GGCC 6 cut(s) 465, 639, 1392, 1570, 1649, 1978
BtgI CCRYGG 1 cut(s) 235
BtsCI GGATG 4 cut(s) 57, 335, 1490, 1550
BtsI GCAGTG 2 cut(s) 101, 993
BtsIMutI CAGTG 6 cut(s) 83, 101, 993, 1378, 2010, 2164
Cac8I GCNNGC 1 cut(s) 1647
CfoI GCGC 1 cut(s) 712
Cfr10I RCCGGY 2 cut(s) 1350, 1392
Cfr13I GGNCC 5 cut(s) 463, 541, 638, 1807, 1976
CseI GACGC 1 cut(s) 196
Csp6I GTAC 6 cut(s) 183, 1119, 1295, 1574, 1619, 2237
CspCI CAANNNNNGTGG 2 cut(s) 1591, 1626
CviQI GTAC 6 cut(s) 183, 1119, 1295, 1574, 1619, 2237
DpnI GATC 8 cut(s) 35, 630, 800, 838, 844, 1184, 1230, 1519
DpnII GATC 8 cut(s) 33, 628, 798, 836, 842, 1182, 1228, 1517
DraI TTTAAA 1 cut(s) 1437
EaeI YGGCCR 1 cut(s) 1568
Eam1104I CTCTTC 4 cut(s) 32, 269, 648, 826
EarI CTCTTC 4 cut(s) 32, 269, 648, 826
EciI GGCGGA 1 cut(s) 314
Eco105I TACGTA 1 cut(s) 2236
Eco130I CCWWGG 2 cut(s) 1441, 1803
Eco47I GGWCC 2 cut(s) 541, 1807
Eco57I CTGAAG 2 cut(s) 650, 2201
Eco81I CCTNAGG 1 cut(s) 602
Eco88I CYCGRG 1 cut(s) 647
EcoO109I RGGNCCY 2 cut(s) 638, 1976
EcoRII CCWGG 3 cut(s) 158, 718, 1621
EcoT14I CCWWGG 2 cut(s) 1441, 1803
ErhI CCWWGG 2 cut(s) 1441, 1803
Esp3I CGTCTC 1 cut(s) 2248
FaqI GGGAC 1 cut(s) 637
FauI CCCGC 1 cut(s) 764
FbaI TGATCA 1 cut(s) 33
Fnu4HI GCNGC 2 cut(s) 217, 1944
FokI GGATG 4 cut(s) 44, 322, 1477, 1557
Fsp4HI GCNGC 2 cut(s) 217, 1944
FspBI CTAG 7 cut(s) 840, 962, 1079, 1364, 1796, 2024, 2046
GlaI GCGC 1 cut(s) 711
GluI GCNGC 2 cut(s) 217, 1944
GsaI CCCAGC 1 cut(s) 65
HaeIII GGCC 6 cut(s) 465, 639, 1392, 1570, 1649, 1978
HapII CCGG 3 cut(s) 1351, 1393, 1844
HgaI GACGC 1 cut(s) 196
HhaI GCGC 1 cut(s) 712
Hin1I GRCGYC 1 cut(s) 207
Hin6I GCGC 1 cut(s) 710
HinP1I GCGC 1 cut(s) 710
HincII GTYRAC 1 cut(s) 1414
HindII GTYRAC 1 cut(s) 1414
HindIII AAGCTT 1 cut(s) 662
HinfI GANTC 9 cut(s) 650, 723, 757, 965, 1068, 1285, 1789, 1799, 1879
HpaII CCGG 3 cut(s) 1351, 1393, 1844
HphI GGTGA 4 cut(s) 1050, 1373, 1625, 2007
Hpy166II GTNNAC 4 cut(s) 70, 1414, 2091, 2233
Hpy8I GTNNAC 4 cut(s) 70, 1414, 2091, 2233
HpyAV CCTTC 5 cut(s) 602, 1025, 1394, 1949, 2021
HpyCH4III ACNGT 4 cut(s) 751, 1258, 2005, 2159
HpyCH4IV ACGT 3 cut(s) 1302, 2235, 2257
HpyF10VI GCNNNNNNNGC 1 cut(s) 213
HpySE526I ACGT 3 cut(s) 1302, 2235, 2257
Hsp92I GRCGYC 1 cut(s) 207
HspAI GCGC 1 cut(s) 710
Ksp22I TGATCA 1 cut(s) 33
Kzo9I GATC 8 cut(s) 33, 628, 798, 836, 842, 1182, 1228, 1517
LmnI GCTCC 2 cut(s) 111, 1846
Lsp1109I GCAGC 2 cut(s) 228, 1955
LweI GCATC 1 cut(s) 1930
MaeI CTAG 7 cut(s) 840, 962, 1079, 1364, 1796, 2024, 2046
MaeII ACGT 3 cut(s) 1302, 2235, 2257
MaeIII GTNAC 5 cut(s) 208, 317, 953, 1781, 2118
MalI GATC 8 cut(s) 35, 630, 800, 838, 844, 1184, 1230, 1519
MbiI CCGCTC 1 cut(s) 1830
MboI GATC 8 cut(s) 33, 628, 798, 836, 842, 1182, 1228, 1517
MfeI CAATTG 2 cut(s) 457, 1895
MflI RGATCY 3 cut(s) 798, 836, 842
MhlI GDGCHC 2 cut(s) 1539, 1924
MlsI TGGCCA 1 cut(s) 1570
MluNI TGGCCA 1 cut(s) 1570
MlyI GAGTC 6 cut(s) 659, 766, 1077, 1294, 1798, 1808
MmeI TCCRAC 5 cut(s) 414, 669, 1047, 1767, 2178
Mox20I TGGCCA 1 cut(s) 1570
MroXI GAANNNNTTC 5 cut(s) 701, 1097, 1467, 2035, 2186
MscI TGGCCA 1 cut(s) 1570
MseI TTAA 7 cut(s) 84, 384, 1271, 1355, 1436, 1481, 1686
MslI CAYNNNNRTG 2 cut(s) 1471, 2040
Msp20I TGGCCA 1 cut(s) 1570
MspI CCGG 3 cut(s) 1351, 1393, 1844
MspR9I CCNGG 3 cut(s) 160, 720, 1623
MunI CAATTG 2 cut(s) 457, 1895
Mva1269I GAATGC 2 cut(s) 181, 1871
MvaI CCWGG 3 cut(s) 160, 720, 1623
MvnI CGCG 1 cut(s) 1035
MwoI GCNNNNNNNGC 1 cut(s) 213
NdeII GATC 8 cut(s) 33, 628, 798, 836, 842, 1182, 1228, 1517
NlaIV GGNNCC 4 cut(s) 464, 542, 572, 1977
NmeAIII GCCGAG 1 cut(s) 599
NmuCI GTSAC 2 cut(s) 208, 2118
NspI RCATGY 5 cut(s) 496, 619, 2097, 2176, 2231
NspV TTCGAA 1 cut(s) 1953
PaeR7I CTCGAG 1 cut(s) 647
PciI ACATGT 3 cut(s) 492, 2093, 2227
PctI GAATGC 2 cut(s) 181, 1871
PdmI GAANNNNTTC 5 cut(s) 701, 1097, 1467, 2035, 2186
PfeI GAWTC 3 cut(s) 723, 965, 1879
PfoI TCCNGGA 1 cut(s) 718
PkrI GCNGC 2 cut(s) 218, 1945
PleI GAGTC 6 cut(s) 658, 765, 1076, 1293, 1797, 1807
PpsI GAGTC 6 cut(s) 658, 765, 1076, 1293, 1797, 1807
Ppu21I YACGTR 1 cut(s) 2236
PscI ACATGT 3 cut(s) 492, 2093, 2227
Psp6I CCWGG 3 cut(s) 158, 718, 1621
PspFI CCCAGC 1 cut(s) 61
PspGI CCWGG 3 cut(s) 158, 718, 1621
PspN4I GGNNCC 4 cut(s) 464, 542, 572, 1977
PspPI GGNCC 5 cut(s) 463, 541, 638, 1807, 1976
PsuI RGATCY 3 cut(s) 798, 836, 842
RsaI GTAC 6 cut(s) 184, 1120, 1296, 1575, 1620, 2238
RsaNI GTAC 6 cut(s) 183, 1119, 1295, 1574, 1619, 2237
RseI CAYNNNNRTG 2 cut(s) 1471, 2040
SaqAI TTAA 7 cut(s) 84, 384, 1271, 1355, 1436, 1481, 1686
SatI GCNGC 2 cut(s) 217, 1944
Sau3AI GATC 8 cut(s) 33, 628, 798, 836, 842, 1182, 1228, 1517
Sau96I GGNCC 5 cut(s) 463, 541, 638, 1807, 1976
ScaI AGTACT 3 cut(s) 184, 1296, 1575
SchI GAGTC 6 cut(s) 659, 766, 1077, 1294, 1798, 1808
ScrFI CCNGG 3 cut(s) 160, 720, 1623
SduI GDGCHC 2 cut(s) 1539, 1924
SfaNI GCATC 1 cut(s) 1930
Sfr274I CTCGAG 1 cut(s) 647
SfuI TTCGAA 1 cut(s) 1953
SinI GGWCC 2 cut(s) 541, 1807
SlaI CTCGAG 1 cut(s) 647
SmiMI CAYNNNNRTG 2 cut(s) 1471, 2040
SmlI CTYRAG 7 cut(s) 361, 424, 610, 647, 754, 1217, 1786
SmoI CTYRAG 7 cut(s) 361, 424, 610, 647, 754, 1217, 1786
SnaBI TACGTA 1 cut(s) 2236
SsiI CCGC 6 cut(s) 299, 339, 771, 1035, 1830, 1917
SspI AATATT 1 cut(s) 1149
SspMI CTAG 7 cut(s) 840, 962, 1079, 1364, 1796, 2024, 2046
StyD4I CCNGG 3 cut(s) 158, 718, 1621
StyI CCWWGG 2 cut(s) 1441, 1803
TaaI ACNGT 4 cut(s) 751, 1258, 2005, 2159
TaiI ACGT 3 cut(s) 1305, 2238, 2260
TaqI TCGA 7 cut(s) 411, 648, 1071, 1163, 1814, 1953, 1999
TatI WGTACW 3 cut(s) 182, 1294, 1573
TfiI GAWTC 3 cut(s) 723, 965, 1879
Tru1I TTAA 7 cut(s) 84, 384, 1271, 1355, 1436, 1481, 1686
Tru9I TTAA 7 cut(s) 84, 384, 1271, 1355, 1436, 1481, 1686
TscAI CASTG 6 cut(s) 83, 108, 1000, 1378, 2010, 2164
TseFI GTSAC 2 cut(s) 208, 2118
TseI GCWGC 2 cut(s) 216, 1943
Tsp45I GTSAC 2 cut(s) 208, 2118
TspDTI ATGAA 5 cut(s) 17, 263, 710, 968, 1007
TspGWI ACGGA 1 cut(s) 224
TspRI CASTG 6 cut(s) 83, 108, 1000, 1378, 2010, 2164
VpaK11BI GGWCC 2 cut(s) 541, 1807
XapI RAATTY 4 cut(s) 373, 402, 484, 1526
XbaI TCTAGA 3 cut(s) 839, 1078, 1363
XceI RCATGY 5 cut(s) 496, 619, 2097, 2176, 2231
XhoI CTCGAG 1 cut(s) 647
XmnI GAANNNNTTC 5 cut(s) 701, 1097, 1467, 2035, 2186
XspI CTAG 7 cut(s) 840, 962, 1079, 1364, 1796, 2024, 2046
ZrmI AGTACT 3 cut(s) 184, 1296, 1575
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.