RchiOBHm_Chr5g0048141

Receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000047
Physical Location & Seq
Forward (+)
44780498 .. 44783209
2712 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ32595

Sequence Viewer

Length: 2712 bp
ATGAGACTTGATAATCCAAATTTGAGTTTGCTCATTGGGAACCTTTCTGAGCTTATGGAACTTCGTCTTGATGGTGTAGACATATCATCACAGAAGAATTCTTGGTGCCAAGCCATATCAACCTCATTGCCAAAGTTGAGGGTGCTGAGCTTGTCCAGTTGTACTCTTTCAGGCCCTATTGATTCTTCCTTACGGAAGCTTCACTCCCTCTCATTGATTCATATAGAATATAATCATTTGTCTTCTCCAGTTCCAGAATTCTTCTCAAACTTCACAAATTTGACTTCCTTACGCTTTGGTAATTCTGGCTTACATGGTACTTTCCCAAATAAGATCTTTCAGTTACCTAGATTACAGACTATTCACTTATGGGGTAATCCACAGCTTCAAGGTTCATTACCAGAGTTTCCGAAAAATGGATTGATTCAATCTCTAGTTCTAAGCGGATCAAATTTTTCAGGGTTATTGCCATACTCTATTGGAGTCCTCACAATGCTGTCCCAATTAGATGTTTCATATTGCAATTTTACAGGACCAATCCCAAAGTCGGTGGAAAATCTTGCAGGATTGGTTTACTTGGACTTGTCAGGGAACAAGTTTAATGGTTCAGTTCCATTTTTCAGAATGGCCAAGAATCTTACCCAAATAAATCTCTCTAAGAATTACCTAACAGGTCAGATTAATTCCACTCATTGGGAGCACCTTACGAATCTGCTGATTCTTGACTTGCATTCTAATCTACTTGATGGAAGTTTTCCCTTCTCTCTATTTTTGCTTCCCTCACTTGAGAAAATATTACTTTCCAACAACCAATTCTCTGGTCAGTTGCTTGAAGTCCCCAATATCTCTTCGTACATTTTGGACACTCTTGATTTGAGTAGCAATAATTTGGAAGGGCCAGTTCCCAGGTCTCTCTTTAATTTGCAAGGGCTCAAGATTCTTTCACTTTCTTCAAACAACTTCAGTGGCCTTCTTTGTCTCAATGATCTTCAGCAGCTAAGGAATCTTTCCAGTGTTGATCTTTCGCACAACAGCTTGTTGATTACTTATGAGCATCATACTAATTCCTCATATTCTTCCTTTCCTCAACTGACCCCATTGCTGTTGGCTTCTGGAGAGTTAAGAACGTTCCCTGAGTTCTTGAGGAATCAATCTGAATTAGCCTATTTGGACCTTTCAGAAAATCAGATTTTCGGCCAGATACCCAATTGGATTTGGAGACTCAACCTTCTTCAGTTAAATCTTTCTTGCAACTCCCTGGTAACTCTAGAAGGTCCAATGCTAAATCTCTCGTCTCGTCTATTCGTTCTTGATCTTCATTCCAACCAGCTTCAGGGACAAATCCCAGTTTTCTCATCACCTGCTTATTATTACAACATTCAATACCTGGATTACTCAAGGAATAATTTCAGCTCTAGCATACCAGCTGATATCGGGAATATCCTTAATTACACTAGATTCTTTTCTATTTCGAACAACAACATCCACGGCAGCATCCCAGGATCGATATGCAATGCATTTTATCTTCAGGTTCTTGATCTTTCCAACAATTCTTTGAGTGCCATGATTCCCCCATGTTTGACTGCAATGAGCAGTAATCTTGCAGTTCTTAATTTAGGGACAAACAGCCTAACTGGTACTATTTCTGACACATTTTGTCCAGATTGTGGCTTGAAAACCCTAGACCTCAATGGAAATCAAATAGTAGGCCAGTTTCCGGAATCTTTAGGAAACTGCAGACTGTTAGAGGTTCTAAACCTTGGAAACAATCAGATCACTGGTACCTTTCCGAATTTGTTAAGTGAAATGCTCATCTTGCGGGTCCTTGTTTTGCGCTCTAATAAATTTTATGGAGAGATTGGATGTCCCAAGACCTATGGCAGCTGGCCACTACTTCAAATTGTTGACATAGCTCACAACAATTTTAGTGGTACAATACCAGGAAAATGCATGAGGAGTTGGCGAGCAATGATGGCTAATGATTCCTTGTCAAAGCTCAAACACCTTCAGTTTGAGGTGTTCACTCAGGTTTATTATGATGATGCAATAACTGTTACCAACAAAGGTCTAGAGATGAAGCTGGAAAAGATTCTAACTATTTTCACCTCAATTGACTTCTCGGGCAACAAATTCAGCGGATCAATACCTGAAGAAGTTGGAGAGCTCAAATCACTCTATGTCCTTAACTTGTCCAGCAATGCTCTCACAGGTGAAGTCCCATCATCTTTGGGAGACTTACAACACATTGAGTCCTTGGACTTGTCAAGTAACAAACTTACCGGAAATATTCCACTGCAACTTGCGAAGCTCACTTTCCTTGCAGTCTTGAATCTCTCAAATAATCAACTTGTTGGAAGGATCCCAAGCAGTACTCAGATTTCAACATTTTCTGCAGATTCCTTTACAGGGAACAAAGCATTATGTGGATTTCCTTTGAATGTACCATGCAGTAATACCAACGAGACAACAAAGTTTCAATACCACAAGTCAGGAATTGGGTCGGTGGTTGATTTGAATGTTATCGGTACTGTTGAGATTGGATGTATTGTTGGCTTTGGAATTGCTACCGGCTCACTTGTGTTCTGCAATAGATGGAGGAAATGGTATTACAGAGCTATGTGTAACATCATATTAAAGATATTCCCTCAGCTGGATCACAGATTTGGTCCACACAGAAGACATGTTTACATAAATCCAAGGTGGGGAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

903

Amino Acids

100.14

Weight (kDa)

6.85

Isoelectric Point (pI)

39.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 557 - 616 2.2e-07 Leucine rich repeat
LRR_8 PF13855 724 - 783 1.5e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1369
Acc36I ACCTGC 1 cut(s) 1369
Acc65I GGTACC 1 cut(s) 1781
AccB1I GGYRCC 2 cut(s) 105, 1781
AccB7I CCANNNNNTGG 2 cut(s) 693, 1667
AccI GTMKAC 1 cut(s) 78
AccIII TCCGGA 1 cut(s) 1717
AciI CCGC 3 cut(s) 444, 1819, 2136
AclI AACGTT 1 cut(s) 1127
AclWI GGATC 6 cut(s) 454, 1510, 2146, 2353, 2366, 2661
AcoI YGGCCR 3 cut(s) 627, 1195, 1886
AcsI RAATTY 8 cut(s) 19, 97, 257, 277, 451, 1792, 1844, 2129
AcuI CTGAAG 7 cut(s) 946, 974, 1217, 1316, 1511, 1991, 2169
AfaI GTAC 9 cut(s) 163, 319, 854, 1639, 1783, 1933, 2371, 2442, 2527
AfiI CCNNNNNNNGG 9 cut(s) 416, 547, 693, 1333, 1667, 1717, 2406, 2650, 2702
AflIII ACRYGT 1 cut(s) 2680
AjnI CCWGG 5 cut(s) 905, 1257, 1386, 1498, 1939
AjuI GAANNNNNNNTTGG 2 cut(s) 797, 829
Alw21I GWGCWC 2 cut(s) 702, 2166
Alw26I GTCTC 6 cut(s) 915, 983, 1213, 1299, 2226, 2456
AlwI GGATC 6 cut(s) 454, 1510, 2146, 2353, 2366, 2661
Ama87I CYCGRG 1 cut(s) 2119
Aor13HI TCCGGA 1 cut(s) 1717
AoxI GGCC 7 cut(s) 172, 627, 896, 967, 1195, 1708, 1886
ApeKI GCWGC 3 cut(s) 994, 1491, 1881
ApoI RAATTY 8 cut(s) 19, 97, 257, 277, 451, 1792, 1844, 2129
AseI ATTAAT 1 cut(s) 681
Asp700I GAANNNNTTC 2 cut(s) 1406, 2088
Asp718I GGTACC 1 cut(s) 1781
AspLEI GCGC 1 cut(s) 1836
AspS9I GGNCC 7 cut(s) 173, 533, 896, 1171, 1274, 1822, 2666
AsuHPI GGTGA 3 cut(s) 1350, 2095, 2222
AsuII TTCGAA 1 cut(s) 1472
AvaI CYCGRG 1 cut(s) 2119
AvaII GGWCC 5 cut(s) 533, 1171, 1274, 1822, 2666
BalI TGGCCA 2 cut(s) 629, 1888
BamHI GGATCC 1 cut(s) 2358
BanI GGYRCC 2 cut(s) 105, 1781
BanII GRGCYC 2 cut(s) 933, 2166
BbsI GAAGAC 2 cut(s) 234, 2683
Bbv12I GWGCWC 2 cut(s) 702, 2166
BbvCI CCTCAGC 1 cut(s) 2646
BbvI GCAGC 3 cut(s) 1006, 1503, 1893
BccI CCATC 5 cut(s) 65, 740, 1966, 2227, 2586
BceAI ACGGC 1 cut(s) 1504
BciT130I CCWGG 5 cut(s) 907, 1259, 1388, 1500, 1941
BcoDI GTCTC 6 cut(s) 915, 983, 1213, 1299, 2226, 2456
BfaI CTAG 7 cut(s) 348, 434, 1268, 1416, 1455, 1682, 2069
BfmI CTRYAG 2 cut(s) 1735, 2391
BfuAI ACCTGC 1 cut(s) 1369
BglII AGATCT 1 cut(s) 333
BisI GCNGC 3 cut(s) 995, 1492, 1882
BlpI GCTNAGC 1 cut(s) 146
BlsI GCNGC 3 cut(s) 996, 1493, 1883
BmcAI AGTACT 1 cut(s) 2371
Bme1390I CCNGG 5 cut(s) 907, 1259, 1388, 1500, 1941
Bme18I GGWCC 5 cut(s) 533, 1171, 1274, 1822, 2666
BmeT110I CYCGRG 1 cut(s) 2119
BmgT120I GGNCC 7 cut(s) 173, 533, 896, 1171, 1274, 1822, 2666
BmiI GGNNCC 5 cut(s) 41, 107, 1783, 1823, 2360
BmrFI CCNGG 5 cut(s) 907, 1259, 1388, 1500, 1941
BmrI ACTGGG 1 cut(s) 1340
BmsI GCATC 3 cut(s) 1063, 1503, 2032
BmuI ACTGGG 1 cut(s) 1340
BpiI GAAGAC 2 cut(s) 234, 2683
BpmI CTGGAG 2 cut(s) 231, 1134
Bpu10I CCTNAGC 2 cut(s) 998, 2646
Bpu1102I GCTNAGC 1 cut(s) 146
Bpu14I TTCGAA 1 cut(s) 1472
BpuEI CTTGAG 4 cut(s) 806, 917, 1162, 1381
Bsa29I ATCGAT 1 cut(s) 1505
BsaI GGTCTC 1 cut(s) 915
BsaJI CCNNGG 7 cut(s) 905, 1257, 1486, 1498, 1759, 2253, 2696
BsaWI WCCGGW 2 cut(s) 1717, 2279
Bsc4I CCNNNNNNNGG 9 cut(s) 416, 547, 693, 1333, 1667, 1717, 2406, 2650, 2702
Bse118I RCCGGY 1 cut(s) 2567
Bse1I ACTGG 8 cut(s) 156, 248, 899, 1011, 1346, 1639, 1711, 1783
Bse3DI GCAATG 6 cut(s) 125, 1097, 1519, 1593, 1974, 2203
BseAI TCCGGA 1 cut(s) 1717
BseBI CCWGG 5 cut(s) 907, 1259, 1388, 1500, 1941
BseCI ATCGAT 1 cut(s) 1505
BseDI CCNNGG 7 cut(s) 905, 1257, 1486, 1498, 1759, 2253, 2696
BseGI GGATG 4 cut(s) 1482, 1494, 1868, 2546
BseLI CCNNNNNNNGG 9 cut(s) 416, 547, 693, 1333, 1667, 1717, 2406, 2650, 2702
BseMI GCAATG 6 cut(s) 125, 1097, 1519, 1593, 1974, 2203
BseMII CTCAG 6 cut(s) 39, 137, 1125, 2039, 2387, 2660
BseNI ACTGG 8 cut(s) 156, 248, 899, 1011, 1346, 1639, 1711, 1783
BseRI GAGGAG 1 cut(s) 1969
BseXI GCAGC 3 cut(s) 1006, 1503, 1893
BshFI GGCC 7 cut(s) 174, 629, 898, 969, 1197, 1710, 1888
BshNI GGYRCC 2 cut(s) 105, 1781
BshVI ATCGAT 1 cut(s) 1505
BsiHKAI GWGCWC 2 cut(s) 702, 2166
BsiHKCI CYCGRG 1 cut(s) 2119
BsiSI CCGG 3 cut(s) 1718, 2280, 2568
BslFI GGGAC 6 cut(s) 484, 821, 1350, 1633, 1851, 2201
BslI CCNNNNNNNGG 9 cut(s) 416, 547, 693, 1333, 1667, 1717, 2406, 2650, 2702
BsmAI GTCTC 6 cut(s) 915, 983, 1213, 1299, 2226, 2456
BsmBI CGTCTC 1 cut(s) 1299
BsmFI GGGAC 6 cut(s) 484, 821, 1350, 1633, 1851, 2201
BsmI GAATGC 1 cut(s) 730
BsnI GGCC 7 cut(s) 174, 629, 898, 969, 1197, 1710, 1888
Bso31I GGTCTC 1 cut(s) 915
BsoBI CYCGRG 1 cut(s) 2119
Bsp119I TTCGAA 1 cut(s) 1472
Bsp1286I GDGCHC 3 cut(s) 702, 933, 2166
Bsp13I TCCGGA 1 cut(s) 1717
Bsp1720I GCTNAGC 1 cut(s) 146
BspACI CCGC 3 cut(s) 444, 1819, 2136
BspANI GGCC 7 cut(s) 174, 629, 898, 969, 1197, 1710, 1888
BspCNI CTCAG 6 cut(s) 40, 138, 1126, 2038, 2386, 2659
BspDI ATCGAT 1 cut(s) 1505
BspEI TCCGGA 1 cut(s) 1717
BspLI GGNNCC 5 cut(s) 41, 107, 1783, 1823, 2360
BspMAI CTGCAG 2 cut(s) 1739, 2395
BspMI ACCTGC 1 cut(s) 1369
BspPI GGATC 6 cut(s) 454, 1510, 2146, 2353, 2366, 2661
BspT104I TTCGAA 1 cut(s) 1472
BspT107I GGYRCC 2 cut(s) 105, 1781
BspTNI GGTCTC 1 cut(s) 915
BsrDI GCAATG 6 cut(s) 125, 1097, 1519, 1593, 1974, 2203
BsrFI RCCGGY 1 cut(s) 2567
BsrI ACTGG 8 cut(s) 156, 248, 899, 1011, 1346, 1639, 1711, 1783
BssAI RCCGGY 1 cut(s) 2567
BssECI CCNNGG 7 cut(s) 905, 1257, 1486, 1498, 1759, 2253, 2696
BssT1I CCWWGG 3 cut(s) 1759, 2253, 2696
Bst2UI CCWGG 5 cut(s) 907, 1259, 1388, 1500, 1941
Bst4CI ACNGT 3 cut(s) 1743, 2053, 2530
Bst6I CTCTTC 1 cut(s) 853
BstBI TTCGAA 1 cut(s) 1472
BstC8I GCNNGC 2 cut(s) 1886, 1965
BstDEI CTNAG 9 cut(s) 48, 146, 440, 657, 998, 1134, 2025, 2373, 2646
BstDSI CCRYGG 1 cut(s) 1486
BstF5I GGATG 4 cut(s) 1482, 1494, 1868, 2546
BstHHI GCGC 1 cut(s) 1836
BstMAI GTCTC 6 cut(s) 915, 983, 1213, 1299, 2226, 2456
BstMWI GCNNNNNNNGC 2 cut(s) 1816, 1973
BstNI CCWGG 5 cut(s) 907, 1259, 1388, 1500, 1941
BstNSI RCATGY 1 cut(s) 2684
BstSCI CCNGG 5 cut(s) 905, 1257, 1386, 1498, 1939
BstSFI CTRYAG 2 cut(s) 1735, 2391
BstV1I GCAGC 3 cut(s) 1006, 1503, 1893
BstV2I GAAGAC 2 cut(s) 234, 2683
BstX2I RGATCY 2 cut(s) 333, 2358
BstXI CCANNNNNNTGG 1 cut(s) 818
BstYI RGATCY 2 cut(s) 333, 2358
Bsu15I ATCGAT 1 cut(s) 1505
BsuRI GGCC 7 cut(s) 174, 629, 898, 969, 1197, 1710, 1888
BsuTUI ATCGAT 1 cut(s) 1505
BtgI CCRYGG 1 cut(s) 1486
BtsCI GGATG 4 cut(s) 1482, 1494, 1868, 2546
BtsI GCAGTG 1 cut(s) 2291
BtsIMutI CAGTG 4 cut(s) 970, 1018, 1776, 2291
BveI ACCTGC 1 cut(s) 1369
Cac8I GCNNGC 2 cut(s) 1886, 1965
CfoI GCGC 1 cut(s) 1836
Cfr10I RCCGGY 1 cut(s) 2567
Cfr13I GGNCC 7 cut(s) 173, 533, 896, 1171, 1274, 1822, 2666
ClaI ATCGAT 1 cut(s) 1505
Csp6I GTAC 9 cut(s) 162, 318, 853, 1638, 1782, 1932, 2370, 2441, 2526
CspCI CAANNNNNGTGG 6 cut(s) 531, 566, 946, 981, 1909, 1944
CviAII CATG 6 cut(s) 314, 1564, 1575, 1951, 2445, 2681
CviQI GTAC 9 cut(s) 162, 318, 853, 1638, 1782, 1932, 2370, 2441, 2526
DdeI CTNAG 9 cut(s) 48, 146, 440, 657, 998, 1134, 2025, 2373, 2646
EaeI YGGCCR 3 cut(s) 627, 1195, 1886
Eam1104I CTCTTC 1 cut(s) 853
EarI CTCTTC 1 cut(s) 853
Ecl136II GAGCTC 1 cut(s) 2164
Eco130I CCWWGG 3 cut(s) 1759, 2253, 2696
Eco24I GRGCYC 2 cut(s) 933, 2166
Eco31I GGTCTC 1 cut(s) 915
Eco32I GATATC 1 cut(s) 1432
Eco47I GGWCC 5 cut(s) 533, 1171, 1274, 1822, 2666
Eco53kI GAGCTC 1 cut(s) 2164
Eco57I CTGAAG 7 cut(s) 946, 974, 1217, 1316, 1511, 1991, 2169
Eco88I CYCGRG 1 cut(s) 2119
EcoICRI GAGCTC 1 cut(s) 2164
EcoO109I RGGNCCY 2 cut(s) 173, 1822
EcoRI GAATTC 2 cut(s) 97, 257
EcoRII CCWGG 5 cut(s) 905, 1257, 1386, 1498, 1939
EcoRV GATATC 1 cut(s) 1432
EcoT14I CCWWGG 3 cut(s) 1759, 2253, 2696
EcoT22I ATGCAT 2 cut(s) 1519, 1952
EcoT38I GRGCYC 2 cut(s) 933, 2166
ErhI CCWWGG 3 cut(s) 1759, 2253, 2696
Esp3I CGTCTC 1 cut(s) 1299
FaeI CATG 6 cut(s) 317, 1567, 1578, 1954, 2448, 2684
FaqI GGGAC 6 cut(s) 484, 821, 1350, 1633, 1851, 2201
FatI CATG 6 cut(s) 313, 1563, 1574, 1950, 2444, 2680
FauI CCCGC 1 cut(s) 1812
FblI GTMKAC 1 cut(s) 78
Fnu4HI GCNGC 3 cut(s) 995, 1492, 1882
FokI GGATG 4 cut(s) 1469, 1481, 1875, 2553
FriOI GRGCYC 2 cut(s) 933, 2166
Fsp4HI GCNGC 3 cut(s) 995, 1492, 1882
FspBI CTAG 7 cut(s) 348, 434, 1268, 1416, 1455, 1682, 2069
GlaI GCGC 1 cut(s) 1835
GluI GCNGC 3 cut(s) 995, 1492, 1882
GsuI CTGGAG 2 cut(s) 231, 1134
HaeIII GGCC 7 cut(s) 174, 629, 898, 969, 1197, 1710, 1888
HapII CCGG 3 cut(s) 1718, 2280, 2568
HhaI GCGC 1 cut(s) 1836
Hin1II CATG 6 cut(s) 317, 1567, 1578, 1954, 2448, 2684
Hin6I GCGC 1 cut(s) 1834
HinP1I GCGC 1 cut(s) 1834
HincII GTYRAC 1 cut(s) 1906
HindII GTYRAC 1 cut(s) 1906
HindIII AAGCTT 1 cut(s) 197
HpaII CCGG 3 cut(s) 1718, 2280, 2568
HphI GGTGA 3 cut(s) 1350, 2095, 2222
Hpy166II GTNNAC 6 cut(s) 79, 574, 1906, 2022, 2669, 2686
Hpy8I GTNNAC 6 cut(s) 79, 574, 1906, 2022, 2669, 2686
HpyAV CCTTC 7 cut(s) 769, 887, 980, 1238, 1265, 2015, 2349
HpyCH4III ACNGT 3 cut(s) 1743, 2053, 2530
HpyCH4IV ACGT 1 cut(s) 1127
HpyF10VI GCNNNNNNNGC 2 cut(s) 1816, 1973
HpyF3I CTNAG 9 cut(s) 48, 146, 440, 657, 998, 1134, 2025, 2373, 2646
HpySE526I ACGT 1 cut(s) 1127
Hsp92II CATG 6 cut(s) 317, 1567, 1578, 1954, 2448, 2684
HspAI GCGC 1 cut(s) 1834
Kpn2I TCCGGA 1 cut(s) 1717
KpnI GGTACC 1 cut(s) 1785
LmnI GCTCC 1 cut(s) 697
Lsp1109I GCAGC 3 cut(s) 1006, 1503, 1893
LweI GCATC 3 cut(s) 1063, 1503, 2032
MaeI CTAG 7 cut(s) 348, 434, 1268, 1416, 1455, 1682, 2069
MaeII ACGT 1 cut(s) 1127
MaeIII GTNAC 5 cut(s) 342, 1261, 2053, 2267, 2621
MfeI CAATTG 2 cut(s) 1207, 2109
MflI RGATCY 2 cut(s) 333, 2358
MhlI GDGCHC 3 cut(s) 702, 933, 2166
MlsI TGGCCA 2 cut(s) 629, 1888
MluNI TGGCCA 2 cut(s) 629, 1888
MlyI GAGTC 3 cut(s) 492, 1215, 2258
MmeI TCCRAC 5 cut(s) 828, 1347, 1569, 2137, 2332
Mox20I TGGCCA 2 cut(s) 629, 1888
Mph1103I ATGCAT 2 cut(s) 1519, 1952
MroI TCCGGA 1 cut(s) 1717
MroXI GAANNNNTTC 2 cut(s) 1406, 2088
MscI TGGCCA 2 cut(s) 629, 1888
Msp20I TGGCCA 2 cut(s) 629, 1888
MspA1I CMGCKG 4 cut(s) 1427, 1884, 2136, 2650
MspI CCGG 3 cut(s) 1718, 2280, 2568
MspR9I CCNGG 5 cut(s) 907, 1259, 1388, 1500, 1941
MunI CAATTG 2 cut(s) 1207, 2109
Mva1269I GAATGC 1 cut(s) 730
MvaI CCWGG 5 cut(s) 907, 1259, 1388, 1500, 1941
MwoI GCNNNNNNNGC 2 cut(s) 1816, 1973
NlaIII CATG 6 cut(s) 317, 1567, 1578, 1954, 2448, 2684
NlaIV GGNNCC 5 cut(s) 41, 107, 1783, 1823, 2360
NsiI ATGCAT 2 cut(s) 1519, 1952
NspI RCATGY 1 cut(s) 2684
NspV TTCGAA 1 cut(s) 1472
PaqCI CACCTGC 1 cut(s) 1369
PciI ACATGT 1 cut(s) 2680
PctI GAATGC 1 cut(s) 730
PdmI GAANNNNTTC 2 cut(s) 1406, 2088
PflMI CCANNNNNTGG 2 cut(s) 693, 1667
PkrI GCNGC 3 cut(s) 996, 1493, 1883
PleI GAGTC 3 cut(s) 491, 1215, 2257
PpsI GAGTC 3 cut(s) 491, 1215, 2257
PpuMI RGGWCCY 1 cut(s) 1822
PscI ACATGT 1 cut(s) 2680
PshBI ATTAAT 1 cut(s) 681
Psp124BI GAGCTC 1 cut(s) 2166
Psp1406I AACGTT 1 cut(s) 1127
Psp5II RGGWCCY 1 cut(s) 1822
Psp6I CCWGG 5 cut(s) 905, 1257, 1386, 1498, 1939
PspGI CCWGG 5 cut(s) 905, 1257, 1386, 1498, 1939
PspN4I GGNNCC 5 cut(s) 41, 107, 1783, 1823, 2360
PspPI GGNCC 7 cut(s) 173, 533, 896, 1171, 1274, 1822, 2666
PspPPI RGGWCCY 1 cut(s) 1822
PstI CTGCAG 2 cut(s) 1739, 2395
PsuI RGATCY 2 cut(s) 333, 2358
PvuII CAGCTG 3 cut(s) 1427, 1884, 2650
RsaI GTAC 9 cut(s) 163, 319, 854, 1639, 1783, 1933, 2371, 2442, 2527
RsaNI GTAC 9 cut(s) 162, 318, 853, 1638, 1782, 1932, 2370, 2441, 2526
SacI GAGCTC 1 cut(s) 2166
SatI GCNGC 3 cut(s) 995, 1492, 1882
Sau96I GGNCC 7 cut(s) 173, 533, 896, 1171, 1274, 1822, 2666
ScaI AGTACT 1 cut(s) 2371
SchI GAGTC 3 cut(s) 492, 1215, 2258
ScrFI CCNGG 5 cut(s) 907, 1259, 1388, 1500, 1941
SduI GDGCHC 3 cut(s) 702, 933, 2166
SfaNI GCATC 3 cut(s) 1063, 1503, 2032
SfcI CTRYAG 2 cut(s) 1735, 2391
SfuI TTCGAA 1 cut(s) 1472
SinI GGWCC 5 cut(s) 533, 1171, 1274, 1822, 2666
SmlI CTYRAG 4 cut(s) 785, 932, 1141, 1396
SmoI CTYRAG 4 cut(s) 785, 932, 1141, 1396
SsiI CCGC 3 cut(s) 444, 1819, 2136
SspI AATATT 2 cut(s) 795, 2287
SspMI CTAG 7 cut(s) 348, 434, 1268, 1416, 1455, 1682, 2069
SstI GAGCTC 1 cut(s) 2166
StyD4I CCNGG 5 cut(s) 905, 1257, 1386, 1498, 1939
StyI CCWWGG 3 cut(s) 1759, 2253, 2696
TaaI ACNGT 3 cut(s) 1743, 2053, 2530
TaiI ACGT 1 cut(s) 1130
TaqI TCGA 2 cut(s) 1472, 1505
TatI WGTACW 2 cut(s) 161, 2369
TscAI CASTG 4 cut(s) 970, 1018, 1783, 2298
TseI GCWGC 3 cut(s) 994, 1491, 1881
TspDTI ATGAA 5 cut(s) 209, 384, 504, 1307, 2090
TspGWI ACGGA 1 cut(s) 208
TspRI CASTG 4 cut(s) 970, 1018, 1783, 2298
Van91I CCANNNNNTGG 2 cut(s) 693, 1667
VpaK11BI GGWCC 5 cut(s) 533, 1171, 1274, 1822, 2666
VspI ATTAAT 1 cut(s) 681
XapI RAATTY 8 cut(s) 19, 97, 257, 277, 451, 1792, 1844, 2129
XbaI TCTAGA 2 cut(s) 1267, 2068
XceI RCATGY 1 cut(s) 2684
XmiI GTMKAC 1 cut(s) 78
XmnI GAANNNNTTC 2 cut(s) 1406, 2088
XspI CTAG 7 cut(s) 348, 434, 1268, 1416, 1455, 1682, 2069
ZrmI AGTACT 1 cut(s) 2371
Zsp2I ATGCAT 2 cut(s) 1519, 1952
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.