Rw0G010120

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00422
OG0000047
Physical Location & Seq
Reverse (-)
52652 .. 61471
8820 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G010120.1

Sequence Viewer

Length: 3060 bp
ATGCCTACTCTGTTCCTCCATTTCTTCCTTTTCTTATTCACTACCACTGTTACTAACCTCATCCCCGCAGTCCACAGCAACTGCATTGAAGCCCAGCAACAATCATTGCTCCATTTCAAGAAAAGTTTTGCATCATCTGATTCTTCCGAATCCTCCAATCTTATCACATGGAATTCGAGTACCGACTGCTGTTCTTGGCTCGGTGTAACTTGCAGCACCAATGGGCGTGTTGTCGGACTTGATATCAGCAGCGAGTCTATCTTCTGCAGCATTGACAATTCAAGCAGTCTCTTCCAACTTCAACATCTTCAGAGCCTCAATTTGGCTCATAACAACTTCAATGATTCTTCAATTCCATCTGCAATCGGAAAGCTTACAGAGTTGAGGTATTTGAATTTAAGTGGAGCTGAATTTACTGGGCAAATTCCCATTGAGGTTGCACACTTGAAAAGGTTAGTAGTTCTTGATCTCTCAACATATTACTCGAGTAGGGAGTTAAAACTTGAGAACCCGAATTTAGGCACTTTAATCCGGAACCTTACACAGCTTACAGAGTTAAATCTTGATCATCTAAACCTATCAGCTGAGGGATCTCATTGGAGCCAAGCCATATCATCTTCACTTCCAAAGCTGAGTCTGTTGACCTTGTCCAATTGTGATCTTTCAGGCCCTATTCATGAATCATTGGCCAGGCTTCATTCTCTATCCATGTTAGTATTGGATGACAACTACATCTCTGGTCCGGTTCCAAAATTCTTTGCCAATTTTTCAAGCTTGATTTCCTTGAGTCTCTCTGATTGTAACTTGTATGGAGCATTTCCCAAAGAGATATTCCAGATACCTTCACTACAGTCTGTTGACCTATCAGATAATTCAGAGCTTCGTGGTTCCTTACCGGAGTTTCCAAAGAATGGATCTCTCGAATCCCTAGTTTTATCCCGGACTAAGTTTTCAGGAGTCTTGCCGGACTCTATGGGCAACCTTGAAATGCTGTTTGAATTAGATCTTTCAGATTGCAATTTCACAGGAGCAGTTCCAAAGTCACTGGAAAACCTAACACAATTGGGGTCTTTGGACTTGTCATCCAACAAGTTTTCTAGTCCGATTAATTCTATTCAATGGGACAAACTCATCAAGCTTGAGCTTCTGGACTTGGCCAACAATCTACTCTACGGGGTTATTCCATTGTCTCCCTTTTCTATTCCCTTGCTGCAGAGGTTAGATCTTTCTGGAAATCACTTCTCTGGTCAGTTGCTTGAATTTTCTAATGTCTCTCTTCAGCTGCACTCCCTTGATTTGAGTAGCAACAATTTGGAAGGATCAATACCCGTGTCTAACCTTCATCTTCTAATGCTTGATTACTTTAATCTTTCTTGGAACAACTTGAGTGGTTTTCTAGAGTCGAGAAATCTTTCGGAATTTCATCTATCCGACTCATCTATCTATCAGCGTAAACCCCTGACGTTGGACCTTTCAAACAACCAGATTCCAGGTCAGATACCCAATTGGATTTGGCGGCTTACTCTTGATCATCTATATCTATGTTGTAACAAGTTGGTAAGTCTAGAAGCTCCTTTACATGGTTTTACTCACCATCTGAACAAGCTTGATCTTCACTCAAACCAGATTCAGGGACAAATACCATTGTTTATAAGTGGTGATTATTTGGATTACTCAGGAAATAATTTCAGCTCTAGTATACCAATTGACATTGGTGATTTCATATCTTCCACGGGCTACCTTTCTCTTTCAAGCAGTAACTTGTATGGGGAAATTCCAAAATCAATATGCAATGCAAGTGTTGCAGTTCTTGATCTCTCTAATAACTCTTTGAGTGGAATCATTCCCCAATGCTTGACTCAGACATCTTCGCTTTCTGTCCTTGATTTGAGGAGAAACAACCTTACTGGATCTATCCCGGATACTTTTCTTGAAGGTTGTCAATTGGTTACTCTAGCTCTGGGCAGAAATCAGATACAAGGTCAATTTCCAAAATCTCTAGCCAATTGTTCAAGCTTAGAGGTTTTAGACCTTGGAATCAATCAAATAACAGATGCCTTTCCCTGCCCGTTGAAGACCATATCCACCTTGCGTGTCCTTATCTTGCGATCCAACAAATTTTATGGACCTATTGGATGTCCTGAGACCAATGGCACCTGGCCGACGCTTCAAATCATAGACTTGGCTCATAACAGTTTTAAAGGTGAAATACCAGGTACTGCAATGATGGTTAATGAAGACGATTACGAAATTCATCATAGATATGAGTGGCTACCACCACTAATTACTCCAAGTGCGTTGAATTCTAAGAAACCGTCTAATCCGTCTAATGGTCGATACACTAATCTGTCTAATCCTACTGTGGGCTATTTTGATTATGGAGATGCAGTAACAACTACAAGCAAAGGTCAAGAGATGGAGCTTGTAAATATTTTATTTATCTTCACTTCGATTGACTTCTCTGCTAACAAGTTTAACGGAACAATACCCAAGGAAATCGGCCAATTGACATCATTACATGTCCTCAATCTGTCCAGTAATGCTTTCACAGGCGAAATCCCATCATCCTTTGGTAACATGAGAAGCATAGAGTCCTTAGACCTCTCACAGAACCACCTGAGCGGCCAAATTCCACCACAGTTTGCAAATCTCAATTTCTTGTCATTTTTGAATGTCTCATATAATCAACTGACGGGAAGGATCCCAACCAGCACTCAGTTATCGACATTTCCAAATACCTCATTCGAGGGTAACAAAGGATTATGGGGGCCTCCTCTGACATCGGATGCAGTAATCGTATCGCCACCTCCAACATTAAATGGAAGCTCAAGTAATCTGAATTCTGGAGATGAGATTGATTGGAATGTTATCAGTGCTGAAATTGGTTTTACATGTGGGTTTGGAATTGCCGTCGGGTCACTTTTTCTTTGCAAGAGATGGAGGAAATGGTATTACAGAGCTATGTTTAAAATCCTGTTCAAGATATTCCCGCAGCTGGAACATAGATTTGGTAATCACAGAAGGCATGTTTACATAAATCAAAGGTATTGGAGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1019

Amino Acids

112.84

Weight (kDa)

5.55

Isoelectric Point (pI)

32.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 72 2.5e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 89 - 238 1.9e-07 Leucine-rich repeat region
LRR_8 PF13855 234 - 291 7.3e-06 Leucine rich repeat
LRR_8 PF13855 306 - 365 3.5e-06 Leucine rich repeat
LRR_8 PF13855 599 - 635 4e-06 Leucine rich repeat
LRR_8 PF13855 838 - 897 6.7e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1652
AccB1I GGYRCC 1 cut(s) 2153
AccB7I CCANNNNNTGG 1 cut(s) 911
AccBSI CCGCTC 1 cut(s) 2622
AccI GTMKAC 1 cut(s) 1699
AccIII TCCGGA 1 cut(s) 531
AciI CCGC 4 cut(s) 66, 1516, 2622, 2990
AclWI GGATC 7 cut(s) 598, 922, 1327, 1918, 2103, 2695, 2708
AcoI YGGCCR 5 cut(s) 687, 1155, 2159, 2500, 2623
AcuI CTGAAG 2 cut(s) 293, 1262
AfaI GTAC 2 cut(s) 181, 2218
AfiI CCNNNNNNNGG 9 cut(s) 322, 518, 911, 1465, 1580, 1630, 2330, 2363, 2995
AflIII ACRYGT 2 cut(s) 2518, 2891
AjnI CCWGG 4 cut(s) 689, 1489, 2156, 2212
AjuI GAANNNNNNNTTGG 4 cut(s) 815, 847, 2991, 3023
Alw26I GTCTC 7 cut(s) 293, 794, 1194, 1276, 2138, 2680, 3046
AlwI GGATC 7 cut(s) 598, 922, 1327, 1918, 2103, 2695, 2708
AlwNI CAGNNNCTG 2 cut(s) 81, 2219
Ama87I CYCGRG 1 cut(s) 484
Aor13HI TCCGGA 1 cut(s) 531
AoxI GGCC 7 cut(s) 667, 687, 1155, 2159, 2500, 2623, 2768
ApeKI GCWGC 6 cut(s) 213, 249, 267, 1210, 1282, 2992
AseI ATTAAT 1 cut(s) 1107
Asp700I GAANNNNTTC 1 cut(s) 1411
AspS9I GGNCC 5 cut(s) 668, 740, 1468, 2126, 2768
AsuC2I CCSGG 2 cut(s) 940, 1919
AsuHPI GGTGA 4 cut(s) 1583, 1670, 1727, 2216
AvaI CYCGRG 1 cut(s) 484
AvaII GGWCC 3 cut(s) 740, 1468, 2126
BalI TGGCCA 2 cut(s) 689, 1157
BamHI GGATCC 1 cut(s) 2700
BanI GGYRCC 1 cut(s) 2153
BarI GAAGNNNNNNTAC 4 cut(s) 1308, 1340, 1560, 1592
BbsI GAAGAC 2 cut(s) 2081, 2244
BbvCI CCTCAGC 1 cut(s) 585
BbvI GCAGC 6 cut(s) 225, 261, 279, 1197, 1269, 3004
BccI CCATC 6 cut(s) 364, 1602, 2221, 2410, 2569, 2931
BceAI ACGGC 1 cut(s) 2894
BciT130I CCWGG 4 cut(s) 691, 1491, 2158, 2214
BciVI GTATCC 1 cut(s) 1915
BclI TGATCA 2 cut(s) 565, 1528
BcnI CCSGG 2 cut(s) 940, 1919
BcoDI GTCTC 7 cut(s) 293, 794, 1194, 1276, 2138, 2680, 3046
BfaI CTAG 7 cut(s) 929, 1098, 1397, 1565, 1695, 1955, 2000
BfmI CTRYAG 3 cut(s) 265, 848, 1211
BfuI GTATCC 1 cut(s) 1915
BglII AGATCT 2 cut(s) 1003, 1222
BisI GCNGC 8 cut(s) 214, 250, 268, 1211, 1283, 1517, 2623, 2993
BlsI GCNGC 8 cut(s) 215, 251, 269, 1212, 1284, 1518, 2624, 2994
Bme1390I CCNGG 6 cut(s) 691, 940, 1491, 1919, 2158, 2214
Bme18I GGWCC 3 cut(s) 740, 1468, 2126
BmeT110I CYCGRG 1 cut(s) 484
BmgT120I GGNCC 5 cut(s) 668, 740, 1468, 2126, 2768
BmiI GGNNCC 7 cut(s) 536, 602, 747, 889, 2155, 2702, 2769
BmrFI CCNGG 6 cut(s) 691, 940, 1491, 1919, 2158, 2214
BmrI ACTGGG 1 cut(s) 426
BmsI GCATC 4 cut(s) 140, 2044, 2374, 2776
BmuI ACTGGG 1 cut(s) 426
BpiI GAAGAC 2 cut(s) 2081, 2244
BpmI CTGGAG 1 cut(s) 2865
Bpu10I CCTNAGC 2 cut(s) 585, 2618
BpuEI CTTGAG 5 cut(s) 524, 805, 1160, 1405, 2812
BpuMI CCSGG 2 cut(s) 940, 1919
BsaI GGTCTC 1 cut(s) 2138
BsaJI CCNNGG 3 cut(s) 1731, 2032, 2490
BsaWI WCCGGW 3 cut(s) 531, 742, 895
BsaXI ACNNNNNCTCC 2 cut(s) 2373, 2403
Bsc4I CCNNNNNNNGG 9 cut(s) 322, 518, 911, 1465, 1580, 1630, 2330, 2363, 2995
Bse1I ACTGG 4 cut(s) 421, 1050, 1912, 2535
Bse3DI GCAATG 3 cut(s) 104, 1798, 2229
BseAI TCCGGA 1 cut(s) 531
BseBI CCWGG 4 cut(s) 691, 1491, 2158, 2214
BseDI CCNNGG 3 cut(s) 1731, 2032, 2490
BseGI GGATG 6 cut(s) 60, 727, 1082, 2141, 2564, 2791
BseLI CCNNNNNNNGG 9 cut(s) 322, 518, 911, 1465, 1580, 1630, 2330, 2363, 2995
BseMI GCAATG 3 cut(s) 104, 1798, 2229
BseMII CTCAG 7 cut(s) 576, 623, 1689, 1874, 2133, 2609, 2729
BseNI ACTGG 4 cut(s) 421, 1050, 1912, 2535
BseRI GAGGAG 2 cut(s) 1906, 2763
BseXI GCAGC 6 cut(s) 225, 261, 279, 1197, 1269, 3004
BseYI CCCAGC 1 cut(s) 93
BsgI GTGCAG 1 cut(s) 1268
BshFI GGCC 7 cut(s) 669, 689, 1157, 2161, 2502, 2625, 2770
BshNI GGYRCC 1 cut(s) 2153
BsiHKCI CYCGRG 1 cut(s) 484
BsiSI CCGG 6 cut(s) 532, 743, 896, 940, 965, 1919
BslFI GGGAC 2 cut(s) 1136, 1647
BslI CCNNNNNNNGG 9 cut(s) 322, 518, 911, 1465, 1580, 1630, 2330, 2363, 2995
BsmAI GTCTC 7 cut(s) 293, 794, 1194, 1276, 2138, 2680, 3046
BsmBI CGTCTC 1 cut(s) 3046
BsmFI GGGAC 2 cut(s) 1136, 1647
BsnI GGCC 7 cut(s) 669, 689, 1157, 2161, 2502, 2625, 2770
Bso31I GGTCTC 1 cut(s) 2138
BsoBI CYCGRG 1 cut(s) 484
Bsp13I TCCGGA 1 cut(s) 531
BspACI CCGC 4 cut(s) 66, 1516, 2622, 2990
BspANI GGCC 7 cut(s) 669, 689, 1157, 2161, 2502, 2625, 2770
BspCNI CTCAG 7 cut(s) 577, 624, 1688, 1873, 2134, 2610, 2728
BspEI TCCGGA 1 cut(s) 531
BspHI TCATGA 1 cut(s) 676
BspLI GGNNCC 7 cut(s) 536, 602, 747, 889, 2155, 2702, 2769
BspMAI CTGCAG 2 cut(s) 269, 1215
BspPI GGATC 7 cut(s) 598, 922, 1327, 1918, 2103, 2695, 2708
BspT107I GGYRCC 1 cut(s) 2153
BspTNI GGTCTC 1 cut(s) 2138
BsrBI CCGCTC 1 cut(s) 2622
BsrDI GCAATG 3 cut(s) 104, 1798, 2229
BsrI ACTGG 4 cut(s) 421, 1050, 1912, 2535
BssECI CCNNGG 3 cut(s) 1731, 2032, 2490
BssNAI GTATAC 1 cut(s) 1700
BssT1I CCWWGG 2 cut(s) 2032, 2490
Bst1107I GTATAC 1 cut(s) 1700
Bst2UI CCWGG 4 cut(s) 691, 1491, 2158, 2214
Bst4CI ACNGT 6 cut(s) 49, 852, 2195, 2316, 2362, 2640
Bst6I CTCTTC 2 cut(s) 296, 1281
BstAPI GCANNNNNTGC 1 cut(s) 1802
BstDSI CCRYGG 1 cut(s) 1731
BstF5I GGATG 6 cut(s) 60, 727, 1082, 2141, 2564, 2791
BstMAI GTCTC 7 cut(s) 293, 794, 1194, 1276, 2138, 2680, 3046
BstMWI GCNNNNNNNGC 1 cut(s) 1802
BstNI CCWGG 4 cut(s) 691, 1491, 2158, 2214
BstNSI RCATGY 3 cut(s) 2522, 2895, 3029
BstSCI CCNGG 6 cut(s) 689, 938, 1489, 1917, 2156, 2212
BstSFI CTRYAG 3 cut(s) 265, 848, 1211
BstV1I GCAGC 6 cut(s) 225, 261, 279, 1197, 1269, 3004
BstV2I GAAGAC 2 cut(s) 2081, 2244
BstX2I RGATCY 6 cut(s) 590, 914, 1003, 1222, 1910, 2700
BstYI RGATCY 6 cut(s) 590, 914, 1003, 1222, 1910, 2700
BstZ17I GTATAC 1 cut(s) 1700
BsuI GTATCC 1 cut(s) 1915
BsuRI GGCC 7 cut(s) 669, 689, 1157, 2161, 2502, 2625, 2770
BtgI CCRYGG 1 cut(s) 1731
BtsCI GGATG 6 cut(s) 60, 727, 1082, 2141, 2564, 2791
BtsIMutI CAGTG 3 cut(s) 45, 1043, 2878
CaiI CAGNNNCTG 2 cut(s) 81, 2219
CciI TCATGA 1 cut(s) 676
Cfr13I GGNCC 5 cut(s) 668, 740, 1468, 2126, 2768
CseI GACGC 1 cut(s) 2173
CsiI ACCWGGT 1 cut(s) 2212
Csp6I GTAC 2 cut(s) 180, 2217
CspCI CAANNNNNGTGG 2 cut(s) 1369, 1404
CviAII CATG 8 cut(s) 168, 677, 709, 1580, 2519, 2578, 2892, 3026
CviQI GTAC 2 cut(s) 180, 2217
DraI TTTAAA 2 cut(s) 2200, 2968
EaeI YGGCCR 5 cut(s) 687, 1155, 2159, 2500, 2623
Eam1104I CTCTTC 2 cut(s) 296, 1281
EarI CTCTTC 2 cut(s) 296, 1281
Eco130I CCWWGG 2 cut(s) 2032, 2490
Eco31I GGTCTC 1 cut(s) 2138
Eco32I GATATC 1 cut(s) 244
Eco47I GGWCC 3 cut(s) 740, 1468, 2126
Eco57I CTGAAG 2 cut(s) 293, 1262
Eco88I CYCGRG 1 cut(s) 484
EcoO109I RGGNCCY 2 cut(s) 668, 2768
EcoRI GAATTC 3 cut(s) 172, 2302, 2839
EcoRII CCWGG 4 cut(s) 689, 1489, 2156, 2212
EcoRV GATATC 1 cut(s) 244
EcoT14I CCWWGG 2 cut(s) 2032, 2490
ErhI CCWWGG 2 cut(s) 2032, 2490
Esp3I CGTCTC 1 cut(s) 3046
FaeI CATG 8 cut(s) 171, 680, 712, 1583, 2522, 2581, 2895, 3029
FaqI GGGAC 2 cut(s) 1136, 1647
FatI CATG 8 cut(s) 167, 676, 708, 1579, 2518, 2577, 2891, 3025
FauI CCCGC 2 cut(s) 73, 2997
FbaI TGATCA 2 cut(s) 565, 1528
FblI GTMKAC 1 cut(s) 1699
Fnu4HI GCNGC 8 cut(s) 214, 250, 268, 1211, 1283, 1517, 2623, 2993
FokI GGATG 6 cut(s) 47, 734, 1069, 2148, 2551, 2798
Fsp4HI GCNGC 8 cut(s) 214, 250, 268, 1211, 1283, 1517, 2623, 2993
FspBI CTAG 7 cut(s) 929, 1098, 1397, 1565, 1695, 1955, 2000
GluI GCNGC 8 cut(s) 214, 250, 268, 1211, 1283, 1517, 2623, 2993
GsaI CCCAGC 1 cut(s) 97
GsuI CTGGAG 1 cut(s) 2865
HaeIII GGCC 7 cut(s) 669, 689, 1157, 2161, 2502, 2625, 2770
HapII CCGG 6 cut(s) 532, 743, 896, 940, 965, 1919
HgaI GACGC 1 cut(s) 2173
Hin1II CATG 8 cut(s) 171, 680, 712, 1583, 2522, 2581, 2895, 3029
HincII GTYRAC 2 cut(s) 642, 859
HindII GTYRAC 2 cut(s) 642, 859
HindIII AAGCTT 5 cut(s) 371, 772, 1136, 1604, 2014
HpaII CCGG 6 cut(s) 532, 743, 896, 940, 965, 1919
HphI GGTGA 4 cut(s) 1583, 1670, 1727, 2216
Hpy166II GTNNAC 6 cut(s) 73, 642, 859, 1454, 1700, 3031
Hpy8I GTNNAC 6 cut(s) 73, 642, 859, 1454, 1700, 3031
Hpy99I CGWCG 2 cut(s) 2167, 2915
HpyAV CCTTC 6 cut(s) 852, 1310, 1349, 1928, 2691, 3015
HpyCH4III ACNGT 6 cut(s) 49, 852, 2195, 2316, 2362, 2640
HpyCH4IV ACGT 2 cut(s) 1463, 3055
HpyF10VI GCNNNNNNNGC 1 cut(s) 1802
HpySE526I ACGT 2 cut(s) 1463, 3055
Hsp92II CATG 8 cut(s) 171, 680, 712, 1583, 2522, 2581, 2895, 3029
Kpn2I TCCGGA 1 cut(s) 531
Ksp22I TGATCA 2 cut(s) 565, 1528
LmnI GCTCC 7 cut(s) 114, 404, 600, 812, 1028, 1576, 2419
Lsp1109I GCAGC 6 cut(s) 225, 261, 279, 1197, 1269, 3004
LweI GCATC 4 cut(s) 140, 2044, 2374, 2776
MabI ACCWGGT 1 cut(s) 2212
MaeI CTAG 7 cut(s) 929, 1098, 1397, 1565, 1695, 1955, 2000
MaeII ACGT 2 cut(s) 1463, 3055
MbiI CCGCTC 1 cut(s) 2622
MfeI CAATTG 7 cut(s) 652, 1061, 1504, 1704, 1943, 2005, 2504
MflI RGATCY 6 cut(s) 590, 914, 1003, 1222, 1910, 2700
MlsI TGGCCA 2 cut(s) 689, 1157
MluNI TGGCCA 2 cut(s) 689, 1157
MlyI GAGTC 9 cut(s) 263, 643, 796, 962, 966, 1409, 1427, 1852, 2600
MmeI TCCRAC 7 cut(s) 214, 319, 1110, 1446, 1455, 2136, 2834
Mox20I TGGCCA 2 cut(s) 689, 1157
MroI TCCGGA 1 cut(s) 531
MroXI GAANNNNTTC 1 cut(s) 1411
MscI TGGCCA 2 cut(s) 689, 1157
MslI CAYNNNNRTG 1 cut(s) 2262
Msp20I TGGCCA 2 cut(s) 689, 1157
MspA1I CMGCKG 3 cut(s) 584, 1282, 2995
MspI CCGG 6 cut(s) 532, 743, 896, 940, 965, 1919
MspR9I CCNGG 6 cut(s) 691, 940, 1491, 1919, 2158, 2214
MunI CAATTG 7 cut(s) 652, 1061, 1504, 1704, 1943, 2005, 2504
MvaI CCWGG 4 cut(s) 691, 1491, 2158, 2214
MwoI GCNNNNNNNGC 1 cut(s) 1802
NciI CCSGG 2 cut(s) 940, 1919
NlaIII CATG 8 cut(s) 171, 680, 712, 1583, 2522, 2581, 2895, 3029
NlaIV GGNNCC 7 cut(s) 536, 602, 747, 889, 2155, 2702, 2769
NmuCI GTSAC 2 cut(s) 1041, 2916
NspI RCATGY 3 cut(s) 2522, 2895, 3029
PaeR7I CTCGAG 1 cut(s) 484
PagI TCATGA 1 cut(s) 676
PciI ACATGT 2 cut(s) 2518, 2891
PdmI GAANNNNTTC 1 cut(s) 1411
PfeI GAWTC 9 cut(s) 140, 149, 344, 680, 923, 1486, 1627, 1839, 2037
PflFI GACNNNGTC 1 cut(s) 646
PflMI CCANNNNNTGG 1 cut(s) 911
PfoI TCCNGGA 2 cut(s) 938, 1917
PkrI GCNGC 8 cut(s) 215, 251, 269, 1212, 1284, 1518, 2624, 2994
PleI GAGTC 9 cut(s) 262, 642, 795, 962, 965, 1408, 1427, 1852, 2599
PpsI GAGTC 9 cut(s) 262, 642, 795, 962, 965, 1408, 1427, 1852, 2599
PscI ACATGT 2 cut(s) 2518, 2891
PshBI ATTAAT 1 cut(s) 1107
PsiI TTATAA 1 cut(s) 1652
Psp6I CCWGG 4 cut(s) 689, 1489, 2156, 2212
PspFI CCCAGC 1 cut(s) 93
PspGI CCWGG 4 cut(s) 689, 1489, 2156, 2212
PspN4I GGNNCC 7 cut(s) 536, 602, 747, 889, 2155, 2702, 2769
PspPI GGNCC 5 cut(s) 668, 740, 1468, 2126, 2768
PspXI VCTCGAGB 1 cut(s) 484
PstI CTGCAG 2 cut(s) 269, 1215
PstNI CAGNNNCTG 2 cut(s) 81, 2219
PsuI RGATCY 6 cut(s) 590, 914, 1003, 1222, 1910, 2700
PsyI GACNNNGTC 1 cut(s) 646
PvuII CAGCTG 3 cut(s) 584, 1282, 2995
RsaI GTAC 2 cut(s) 181, 2218
RsaNI GTAC 2 cut(s) 180, 2217
RseI CAYNNNNRTG 1 cut(s) 2262
SatI GCNGC 8 cut(s) 214, 250, 268, 1211, 1283, 1517, 2623, 2993
Sau96I GGNCC 5 cut(s) 668, 740, 1468, 2126, 2768
SchI GAGTC 9 cut(s) 263, 643, 796, 962, 966, 1409, 1427, 1852, 2600
ScrFI CCNGG 6 cut(s) 691, 940, 1491, 1919, 2158, 2214
SexAI ACCWGGT 1 cut(s) 2212
SfaNI GCATC 4 cut(s) 140, 2044, 2374, 2776
SfcI CTRYAG 3 cut(s) 265, 848, 1211
Sfr274I CTCGAG 1 cut(s) 484
SinI GGWCC 3 cut(s) 740, 1468, 2126
SlaI CTCGAG 1 cut(s) 484
SmiMI CAYNNNNRTG 1 cut(s) 2262
SmlI CTYRAG 6 cut(s) 484, 503, 784, 1139, 1384, 2827
SmoI CTYRAG 6 cut(s) 484, 503, 784, 1139, 1384, 2827
SsiI CCGC 4 cut(s) 66, 1516, 2622, 2990
SspI AATATT 1 cut(s) 2431
SspMI CTAG 7 cut(s) 929, 1098, 1397, 1565, 1695, 1955, 2000
StyD4I CCNGG 6 cut(s) 689, 938, 1489, 1917, 2156, 2212
StyI CCWWGG 2 cut(s) 2032, 2490
TaaI ACNGT 6 cut(s) 49, 852, 2195, 2316, 2362, 2640
TaiI ACGT 2 cut(s) 1466, 3058
TaqI TCGA 8 cut(s) 176, 485, 921, 1403, 2335, 2450, 2723, 2745
TauI GCSGC 2 cut(s) 1519, 2625
TfiI GAWTC 9 cut(s) 140, 149, 344, 680, 923, 1486, 1627, 1839, 2037
TscAI CASTG 3 cut(s) 52, 1050, 2878
TseFI GTSAC 2 cut(s) 1041, 2916
TseI GCWGC 6 cut(s) 213, 249, 267, 1210, 1282, 2992
Tsp45I GTSAC 2 cut(s) 1041, 2916
TspDTI ATGAA 8 cut(s) 665, 686, 693, 1331, 1412, 1711, 2243, 2250
TspGWI ACGGA 2 cut(s) 2313, 2493
TspRI CASTG 3 cut(s) 52, 1050, 2878
Tth111I GACNNNGTC 1 cut(s) 646
Van91I CCANNNNNTGG 1 cut(s) 911
VpaK11BI GGWCC 3 cut(s) 740, 1468, 2126
VspI ATTAAT 1 cut(s) 1107
XbaI TCTAGA 2 cut(s) 1396, 1564
XceI RCATGY 3 cut(s) 2522, 2895, 3029
XcmI CCANNNNNNNNNTGG 1 cut(s) 715
XhoI CTCGAG 1 cut(s) 484
XmiI GTMKAC 1 cut(s) 1699
XmnI GAANNNNTTC 1 cut(s) 1411
XspI CTAG 7 cut(s) 929, 1098, 1397, 1565, 1695, 1955, 2000
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.