Rw3G010350

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0000047
Physical Location & Seq
Forward (+)
9915359 .. 9921777
6419 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G010350.1

Sequence Viewer

Length: 3321 bp
ATGATGGCAAATGAAGCCGGGGTTGCATCAAATCATCTTAAAATTCAGGGAGATGAATGGTTTGGTTTTTTTTCAAGATGCAGTTGCAGTTACCAGCAGTGTACCAAAGACCAGCAACTAACGTTGCTCGATTTCAAGAATGGCCTCGTTTTTAATTCTTCTCTTTCCTCCAAGCTTGTATCATGGAATTCAAGAACTGACTGCTGTTCTTGGTCGGGTGTAACTTGCAGTACTAACGGGACTGTTGTTGCTCTTGACATCAGCCGCGAGTCTATCTCAGGTGGAATCGACAACTCTAGCAGTTTGTTTGATCTTCAACATCTTCAAAGCCTCAGTTTGGCCTTTAACAACTTCACTGGCTCTCAAATTCCATCTGCAACCGGAAAGCTCACAGGTTTGAGGTACCTAAACTTATCATCTGCTGGTTATGCAGGGAAAATTCCCATTGACATTTCATTGTTGGCAAAGTTGGTTATCCTTGATATTTCCAATCAAGGACTTGAGATCCAGAATTTGAGCTTGCTGGTTCAGAACCTCACGAAACTTGCAGAGTTATATCTTGACAATGTGAATATATTGTCACAGAGAAGTGACTGGTCCCTAGCCATATCATCATCACTGCCAAACCTGAAGGTGTTGAGCTTATCCAACTGTCATCTTTCAGGCCCTATTGACAAGTCCCTGGCTAAGCTCTCATCTCTATCCGTGATTCGGTTGGATTTTAACAAGATATCTTCTCCCATTCCTGGATTCATTGCCAACTTTACAAACTTGACTACCTTGAGTCTCAGAAGCTGTGGTTTGCAGGGAACATTTCCAAAAGAGATCATTCAGGTACCTTCTTTACAAACTATTGATCTTTCCTATAACTACGGTCTTGGTGGTTCCTTGCCCGAATTTTCAAAGAATGCATCTCTTCAGTCCTTGAACCTATTTGTAACAAACTTTTCAGGGGTCTTACCTGACTCCATTGGAAACCTCAATATGTCAATGGGAAACATTACAAAATTGGTTCATTTTGACTTGTCAGGGAATCAGTTTACTGGTTCAATTCCATGCTTCAGTAGCGCGAAAAATCTAGCCGAAATAATTCTGTCCGGCAATGATCTAACTGGTCATATTAGTTGCACTCAGTGGCAAAACCTTACTAGCCTAGTGACTATCAACTTAAGTGATAATATGCTTCAAGGGAACCTTTCATCCTCTTTGTTTTGTCTTCCCTTGCTGAAGAGCTTAGATCTTGGCCACAATCAATTCTCTGGTCAATTCCCTGAAATTTGCAATGCCTCTTCTTACTTGTTGGAAATTGTTGACTTAAGTGACAACAACCTTGAAGGGCCAATACCCATGTCTATCTTTAATCTCAGACGACTTCAGAGACTTCTTCTTAATTCAAACAGTCTCAATGGCTCATTTCCTCTTGATGGTCTTCACAAGCTCATAAATCTTCAGTTTCTTTATCTTTCAGAGAATAGCTTGGTGATCAGTTATGATGCTACCAATTCCTCTTATTCCTCATTTCCTCAGCTTTATCAATTGATGTTGGCTTCAGGAAAGTTGACAACATTCCCTGATTTCTTGAGAAATCAATCCGAATTGGCCTTTCTGGACCTTTCAAATAACCTGATACATGGCATGATACCTAACTGGCTTTGGAAGCTTAATCTTCATCATCTGAACCTTTCCTGTAACTCCCTACGAACTATAGAAGGTCCTTTACTCAATGTCACCTCTCCGTGGTTGCTGGACCTCAGTTACAACAGGCTTCAAGGGCAGATCCCAAATTTTTCTTCTTATTATCTGGATTACTCCAGCAATAATTTCAGCTCTGGCATACCGACTGGTGCAGATTTCTCTAGGTATGCTTCATTTTTCTCTGTTGGAAACAATAACCTCAATGGGATCATTCCCGGATCAATTTGCAATTCTGCAGCTCTTGAGGTTCTTGATCTATCCAATAATTCCTTCACTGGCACTCTTCCTCAGGGCTTCACTACAATGAGTAGCCTAGCAGTACTTGATTTAAGTGGAAACAATGTTACAAATGTTCATGCATTACCTCAGAATTGTAACTTGGGAAGTCTAGACCTAAGTGGAAATCAGTTAGAAGGCCAGCTTCCAAAATCTCTTGTCAACTGCACAAAGTTGGAGGTTTTAAACCTCGGAAACAATCAGATAACGGATACTTTTCCATGCTTCTTGAAGAACATATCCACCTTGCGTCTCCTTAGTTTACGGTCCAATAACTTTTATGGACCCACTGGTTGTCCCAAGACTAATGGAGCTTGGCCAATGCTTCAGGTTATAGACCTAGCTGACAACAATTTTGATGGTGAAATATCTGGAAGATTTTTGTCAACCTGGCAAACAATGATAGCCAACAAAGATGATGCTGCATCAAATCGCTATTACCTTGGAATGCAGGGAGGTATGCATTATGTGATTAATTATCGAGATGAAGTTACAGTTAGTAGCAAAGGTTTACAGATGAACCTGGCAAAGATTCTAACTGTTTTCACCTTAATTGATTTCTCATGCAACAAGTTCAATGGATCAATACCAGAGGAAATTGGAGGACTCAAATCATTACGTGTCCTCAACTTGTCTAATAATGCTTTCACAGGTGCAATCCCATCATCATTAAGTAACTTGCAAGTAGTTGAGTCTTTAGACCTCTCGCAGAACAACCTGAGCGGTGAAATTCCACCACAGTTTGCGAAGCTTACTTTCCTTTCATTCTTGAATCTCTCAAATAACCAACTGGTGGGGAAGATTCCTACAAGTACTCAGTTTTCAACATTTCCAAAAACTTCATTTGAAGGAAATAAAGATCTATGGGGACCTCCTTTAACAGAAGAAAACACAGCGGGAACATCACCACCAACAATAGAAGGAAGCAGTCAAATTTCTGGACACGAGGTTGATTGGGATATTATCATTGCCATTGCGTCACTATACTTATGCAAGAGATGGAGGCAGTGGTATTACATGGCTATGTATAACATGCTTCTTATTTCTTGGAATTCAAGTACCGACTGTTGTTCTTGGGTCGGTGTTACTTGCAGCACTGTTGGGATTGTCATCGGTCTGGACCTCAGCCGCGAAGGTATCTCCATTGGAATTGAAAATTCCAGCAATCTCGTTGATCTTCAACATCTTCAAAGCCTCAATTTGGCCTTTAACGACTTGGTTGGGGTATTTCCAAAAGAGTTCTTTCAGGTACCTTCTCTAGAAACTCTTGACCTTTCCTATAATCCAGAACTACAAGGTTTCTTGCCAGAATTTCCAAACAATATGGATCTCTCCGGTCCTTGGTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1106

Amino Acids

121.08

Weight (kDa)

5.0

Isoelectric Point (pI)

37.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 37 - 77 3.9e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 95 - 243 1.4e-09 Leucine-rich repeat region
LRR_8 PF13855 627 - 679 1.1e-07 Leucine rich repeat
LRR_14 PF23598 835 - 920 5.6e-07 Leucine-rich repeat region
LRR_8 PF13855 862 - 921 1.1e-07 Leucine rich repeat
LRR_8 PF13855 1048 - 1086 2.6e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 3 cut(s) 402, 835, 3220
AccB1I GGYRCC 3 cut(s) 402, 835, 3220
AccB7I CCANNNNNTGG 1 cut(s) 2764
AccBSI CCGCTC 1 cut(s) 2694
AccII CGCG 3 cut(s) 267, 1070, 3102
AciI CCGC 4 cut(s) 265, 2694, 2867, 3100
AclI AACGTT 1 cut(s) 122
AclWI GGATC 6 cut(s) 499, 1771, 1910, 1921, 2560, 3306
AcoI YGGCCR 2 cut(s) 1243, 2288
AcuI CTGAAG 8 cut(s) 650, 902, 1045, 1247, 1358, 1433, 1533, 2282
AdeI CACNNNGTG 1 cut(s) 1134
AfaI GTAC 8 cut(s) 103, 232, 404, 837, 2016, 2785, 3031, 3222
AfiI CCNNNNNNNGG 8 cut(s) 337, 711, 746, 1424, 1737, 2764, 3172, 3312
AflII CTTAAG 2 cut(s) 1168, 1315
AflIII ACRYGT 1 cut(s) 2590
AjnI CCWGG 4 cut(s) 681, 745, 2360, 2493
AjuI GAANNNNNNNTTGG 6 cut(s) 1774, 1806, 1949, 1981, 2057, 2089
AloI GAACNNNNNNTCC 2 cut(s) 1184, 1216
Alw26I GTCTC 4 cut(s) 791, 1372, 1406, 2228
AlwI GGATC 6 cut(s) 499, 1771, 1910, 1921, 2560, 3306
AlwNI CAGNNNCTG 1 cut(s) 795
AoxI GGCC 9 cut(s) 142, 339, 664, 1243, 1337, 1599, 2110, 2288, 3174
ApeKI GCWGC 3 cut(s) 1931, 2393, 3063
ArsI GACNNNNNNTTYG 2 cut(s) 2309, 2341
AseI ATTAAT 1 cut(s) 2445
Asp700I GAANNNNTTC 1 cut(s) 1089
Asp718I GGTACC 3 cut(s) 402, 835, 3220
AspLEI GCGC 1 cut(s) 1070
AsuC2I CCSGG 2 cut(s) 19, 1911
AsuHPI GGTGA 6 cut(s) 1492, 1720, 2345, 2509, 2708, 2868
AvaII GGWCC 9 cut(s) 597, 1609, 1712, 1747, 2238, 2255, 2840, 3091, 3308
AxyI CCTNAGG 1 cut(s) 1983
BalI TGGCCA 2 cut(s) 1245, 2290
BanI GGYRCC 3 cut(s) 402, 835, 3220
BarI GAAGNNNNNNTAC 4 cut(s) 1326, 1358, 1701, 1733
BauI CACGAG 1 cut(s) 2915
BbsI GAAGAC 2 cut(s) 1208, 1421
BbvCI CCTCAGC 2 cut(s) 1524, 3095
BbvI GCAGC 3 cut(s) 1943, 2380, 3075
BccI CCATC 5 cut(s) 379, 1418, 2324, 2641, 2964
BciT130I CCWGG 4 cut(s) 683, 747, 2362, 2495
BciVI GTATCC 1 cut(s) 2176
BclI TGATCA 1 cut(s) 1482
BcnI CCSGG 2 cut(s) 19, 1911
BcoDI GTCTC 4 cut(s) 791, 1372, 1406, 2228
BfmI CTRYAG 2 cut(s) 1704, 1929
BfrI CTTAAG 2 cut(s) 1168, 1315
BfuI GTATCC 1 cut(s) 2176
BglII AGATCT 2 cut(s) 1237, 2830
BisI GCNGC 5 cut(s) 265, 1932, 2394, 3064, 3100
BlpI GCTNAGC 1 cut(s) 687
BlsI GCNGC 5 cut(s) 266, 1933, 2395, 3065, 3101
BmcAI AGTACT 3 cut(s) 232, 2016, 2785
Bme1390I CCNGG 6 cut(s) 19, 683, 747, 1911, 2362, 2495
Bme18I GGWCC 9 cut(s) 597, 1609, 1712, 1747, 2238, 2255, 2840, 3091, 3308
BmiI GGNNCC 8 cut(s) 404, 599, 837, 886, 1193, 2257, 2841, 3222
BmrFI CCNGG 6 cut(s) 19, 683, 747, 1911, 2362, 2495
BmsI GCATC 6 cut(s) 35, 68, 920, 1483, 2380, 2405
BpiI GAAGAC 2 cut(s) 1208, 1421
BplI GAGNNNNNCTC 2 cut(s) 260, 292
BpmI CTGGAG 1 cut(s) 1795
Bpu10I CCTNAGC 3 cut(s) 1524, 2690, 3095
Bpu1102I GCTNAGC 1 cut(s) 687
BpuEI CTTGAG 4 cut(s) 521, 802, 1600, 1958
BpuMI CCSGG 2 cut(s) 19, 1911
BsaAI YACGTR 1 cut(s) 2591
BsaBI GATNNNNATC 1 cut(s) 3080
BsaJI CCNNGG 6 cut(s) 18, 681, 1736, 2161, 2413, 3311
BsaWI WCCGGW 2 cut(s) 380, 3305
Bsc4I CCNNNNNNNGG 8 cut(s) 337, 711, 746, 1424, 1737, 2764, 3172, 3312
Bse1I ACTGG 9 cut(s) 361, 599, 1048, 1117, 1652, 1846, 1975, 2266, 2766
Bse21I CCTNAGG 1 cut(s) 1983
Bse3DI GCAATG 5 cut(s) 753, 1108, 1288, 2937, 2943
Bse8I GATNNNNATC 1 cut(s) 3080
BseBI CCWGG 4 cut(s) 683, 747, 2362, 2495
BseDI CCNNGG 6 cut(s) 18, 681, 1736, 2161, 2413, 3311
BseGI GGATG 1 cut(s) 1199
BseJI GATNNNNATC 1 cut(s) 3080
BseLI CCNNNNNNNGG 8 cut(s) 337, 711, 746, 1424, 1737, 2764, 3172, 3312
BseMI GCAATG 5 cut(s) 753, 1108, 1288, 2937, 2943
BseNI ACTGG 9 cut(s) 361, 599, 1048, 1117, 1652, 1846, 1975, 2266, 2766
BseXI GCAGC 3 cut(s) 1943, 2380, 3075
BsgI GTGCAG 2 cut(s) 1866, 2122
Bsh1236I CGCG 3 cut(s) 267, 1070, 3102
BshFI GGCC 9 cut(s) 144, 341, 666, 1245, 1339, 1601, 2112, 2290, 3176
BshNI GGYRCC 3 cut(s) 402, 835, 3220
BsiSI CCGG 5 cut(s) 18, 381, 1098, 1911, 3306
BslFI GGGAC 5 cut(s) 253, 583, 664, 2253, 2853
BslI CCNNNNNNNGG 8 cut(s) 337, 711, 746, 1424, 1737, 2764, 3172, 3312
BsmAI GTCTC 4 cut(s) 791, 1372, 1406, 2228
BsmBI CGTCTC 1 cut(s) 2228
BsmFI GGGAC 5 cut(s) 253, 583, 664, 2253, 2853
BsmI GAATGC 2 cut(s) 913, 2424
BsnI GGCC 9 cut(s) 144, 341, 666, 1245, 1339, 1601, 2112, 2290, 3176
Bsp1720I GCTNAGC 1 cut(s) 687
BspACI CCGC 4 cut(s) 265, 2694, 2867, 3100
BspANI GGCC 9 cut(s) 144, 341, 666, 1245, 1339, 1601, 2112, 2290, 3176
BspFNI CGCG 3 cut(s) 267, 1070, 3102
BspLI GGNNCC 8 cut(s) 404, 599, 837, 886, 1193, 2257, 2841, 3222
BspMAI CTGCAG 1 cut(s) 1933
BspPI GGATC 6 cut(s) 499, 1771, 1910, 1921, 2560, 3306
BspQI GCTCTTC 1 cut(s) 1223
BspT107I GGYRCC 3 cut(s) 402, 835, 3220
BspTI CTTAAG 2 cut(s) 1168, 1315
BsrBI CCGCTC 1 cut(s) 2694
BsrDI GCAATG 5 cut(s) 753, 1108, 1288, 2937, 2943
BsrI ACTGG 9 cut(s) 361, 599, 1048, 1117, 1652, 1846, 1975, 2266, 2766
BssECI CCNNGG 6 cut(s) 18, 681, 1736, 2161, 2413, 3311
BssSI CACGAG 1 cut(s) 2915
BssT1I CCWWGG 2 cut(s) 2413, 3311
Bst2BI CACGAG 1 cut(s) 2915
Bst2UI CCWGG 4 cut(s) 683, 747, 2362, 2495
Bst6I CTCTTC 4 cut(s) 921, 1223, 1294, 1983
BstAFI CTTAAG 2 cut(s) 1168, 1315
BstBAI YACGTR 1 cut(s) 2591
BstC8I GCNNGC 2 cut(s) 521, 2114
BstDSI CCRYGG 1 cut(s) 1736
BstF5I GGATG 1 cut(s) 1199
BstFNI CGCG 3 cut(s) 267, 1070, 3102
BstHHI GCGC 1 cut(s) 1070
BstMAI GTCTC 4 cut(s) 791, 1372, 1406, 2228
BstMWI GCNNNNNNNGC 6 cut(s) 14, 23, 428, 1065, 1657, 1771
BstNI CCWGG 4 cut(s) 683, 747, 2362, 2495
BstNSI RCATGY 1 cut(s) 3007
BstSCI CCNGG 6 cut(s) 17, 681, 745, 1909, 2360, 2493
BstSFI CTRYAG 2 cut(s) 1704, 1929
BstUI CGCG 3 cut(s) 267, 1070, 3102
BstV1I GCAGC 3 cut(s) 1943, 2380, 3075
BstV2I GAAGAC 2 cut(s) 1208, 1421
BstX2I RGATCY 5 cut(s) 504, 1237, 1776, 2830, 3298
BstYI RGATCY 5 cut(s) 504, 1237, 1776, 2830, 3298
Bsu36I CCTNAGG 1 cut(s) 1983
BsuI GTATCC 1 cut(s) 2176
BsuRI GGCC 9 cut(s) 144, 341, 666, 1245, 1339, 1601, 2112, 2290, 3176
BtgI CCRYGG 1 cut(s) 1736
BtsCI GGATG 1 cut(s) 1199
BtsI GCAGTG 3 cut(s) 104, 617, 2984
BtsIMutI CAGTG 8 cut(s) 104, 354, 617, 1139, 1968, 2259, 2984, 3066
Cac8I GCNNGC 2 cut(s) 521, 2114
CaiI CAGNNNCTG 1 cut(s) 795
CfoI GCGC 1 cut(s) 1070
CseI GACGC 2 cut(s) 2210, 2937
Csp6I GTAC 8 cut(s) 102, 231, 403, 836, 2015, 2784, 3030, 3221
CviQI GTAC 8 cut(s) 102, 231, 403, 836, 2015, 2784, 3030, 3221
DraI TTTAAA 1 cut(s) 2157
DraIII CACNNNGTG 1 cut(s) 1134
EaeI YGGCCR 2 cut(s) 1243, 2288
Eam1104I CTCTTC 4 cut(s) 921, 1223, 1294, 1983
EarI CTCTTC 4 cut(s) 921, 1223, 1294, 1983
Eco130I CCWWGG 2 cut(s) 2413, 3311
Eco32I GATATC 1 cut(s) 732
Eco47I GGWCC 9 cut(s) 597, 1609, 1712, 1747, 2238, 2255, 2840, 3091, 3308
Eco57I CTGAAG 8 cut(s) 650, 902, 1045, 1247, 1358, 1433, 1533, 2282
Eco81I CCTNAGG 1 cut(s) 1983
EcoO109I RGGNCCY 3 cut(s) 665, 1712, 2840
EcoRI GAATTC 2 cut(s) 187, 3022
EcoRII CCWGG 4 cut(s) 681, 745, 2360, 2493
EcoRV GATATC 1 cut(s) 732
EcoT14I CCWWGG 2 cut(s) 2413, 3311
EcoT22I ATGCAT 3 cut(s) 913, 2056, 2436
ErhI CCWWGG 2 cut(s) 2413, 3311
Esp3I CGTCTC 1 cut(s) 2228
FalI AAGNNNNNCTT 4 cut(s) 1179, 1211, 2100, 2132
FaqI GGGAC 5 cut(s) 253, 583, 664, 2253, 2853
FauI CCCGC 1 cut(s) 2860
FbaI TGATCA 1 cut(s) 1482
Fnu4HI GCNGC 5 cut(s) 265, 1932, 2394, 3064, 3100
FokI GGATG 1 cut(s) 1186
Fsp4HI GCNGC 5 cut(s) 265, 1932, 2394, 3064, 3100
GlaI GCGC 1 cut(s) 1069
GluI GCNGC 5 cut(s) 265, 1932, 2394, 3064, 3100
GsuI CTGGAG 1 cut(s) 1795
HaeIII GGCC 9 cut(s) 144, 341, 666, 1245, 1339, 1601, 2112, 2290, 3176
HapII CCGG 5 cut(s) 18, 381, 1098, 1911, 3306
HgaI GACGC 2 cut(s) 2210, 2937
HhaI GCGC 1 cut(s) 1070
Hin6I GCGC 1 cut(s) 1068
HinP1I GCGC 1 cut(s) 1068
HincII GTYRAC 4 cut(s) 1312, 1560, 2134, 2358
HindII GTYRAC 4 cut(s) 1312, 1560, 2134, 2358
HindIII AAGCTT 3 cut(s) 173, 1658, 2720
HpaII CCGG 5 cut(s) 18, 381, 1098, 1911, 3306
HphI GGTGA 6 cut(s) 1492, 1720, 2345, 2509, 2708, 2868
Hpy166II GTNNAC 8 cut(s) 102, 1041, 1312, 1560, 2134, 2234, 2358, 2483
Hpy8I GTNNAC 8 cut(s) 102, 1041, 1312, 1560, 2134, 2234, 2358, 2483
HpyCH4IV ACGT 2 cut(s) 122, 2590
HpyF10VI GCNNNNNNNGC 6 cut(s) 14, 23, 428, 1065, 1657, 1771
HpySE526I ACGT 2 cut(s) 122, 2590
HspAI GCGC 1 cut(s) 1068
KpnI GGTACC 3 cut(s) 406, 839, 3224
Ksp22I TGATCA 1 cut(s) 1482
LguI GCTCTTC 1 cut(s) 1223
LmnI GCTCC 1 cut(s) 2282
Lsp1109I GCAGC 3 cut(s) 1943, 2380, 3075
LweI GCATC 6 cut(s) 35, 68, 920, 1483, 2380, 2405
MaeII ACGT 2 cut(s) 122, 2590
MbiI CCGCTC 1 cut(s) 2694
MfeI CAATTG 1 cut(s) 1535
MflI RGATCY 5 cut(s) 504, 1237, 1776, 2830, 3298
MlsI TGGCCA 2 cut(s) 1245, 2290
MluNI TGGCCA 2 cut(s) 1245, 2290
MlyI GAGTC 5 cut(s) 278, 793, 959, 2571, 2672
MmeI TCCRAC 5 cut(s) 672, 696, 1281, 1861, 2127
Mox20I TGGCCA 2 cut(s) 1245, 2290
Mph1103I ATGCAT 3 cut(s) 913, 2056, 2436
MroXI GAANNNNTTC 1 cut(s) 1089
MscI TGGCCA 2 cut(s) 1245, 2290
MslI CAYNNNNRTG 2 cut(s) 1997, 2993
Msp20I TGGCCA 2 cut(s) 1245, 2290
MspA1I CMGCKG 1 cut(s) 2867
MspCI CTTAAG 2 cut(s) 1168, 1315
MspI CCGG 5 cut(s) 18, 381, 1098, 1911, 3306
MspR9I CCNGG 6 cut(s) 19, 683, 747, 1911, 2362, 2495
MunI CAATTG 1 cut(s) 1535
Mva1269I GAATGC 2 cut(s) 913, 2424
MvaI CCWGG 4 cut(s) 683, 747, 2362, 2495
MvnI CGCG 3 cut(s) 267, 1070, 3102
MwoI GCNNNNNNNGC 6 cut(s) 14, 23, 428, 1065, 1657, 1771
NciI CCSGG 2 cut(s) 19, 1911
NlaIV GGNNCC 8 cut(s) 404, 599, 837, 886, 1193, 2257, 2841, 3222
NmuCI GTSAC 6 cut(s) 579, 590, 1156, 1319, 1726, 2949
NsiI ATGCAT 3 cut(s) 913, 2056, 2436
NspI RCATGY 1 cut(s) 3007
PciSI GCTCTTC 1 cut(s) 1223
PctI GAATGC 2 cut(s) 913, 2424
PdmI GAANNNNTTC 1 cut(s) 1089
PfeI GAWTC 7 cut(s) 285, 709, 750, 1033, 2503, 2743, 2773
PflMI CCANNNNNTGG 1 cut(s) 2764
PfoI TCCNGGA 2 cut(s) 745, 1909
PkrI GCNGC 5 cut(s) 266, 1933, 2395, 3065, 3101
PleI GAGTC 5 cut(s) 277, 792, 959, 2571, 2671
PpsI GAGTC 5 cut(s) 277, 792, 959, 2571, 2671
Ppu21I YACGTR 1 cut(s) 2591
PpuMI RGGWCCY 2 cut(s) 1712, 2840
PshBI ATTAAT 1 cut(s) 2445
Psp1406I AACGTT 1 cut(s) 122
Psp5II RGGWCCY 2 cut(s) 1712, 2840
Psp6I CCWGG 4 cut(s) 681, 745, 2360, 2493
PspGI CCWGG 4 cut(s) 681, 745, 2360, 2493
PspN4I GGNNCC 8 cut(s) 404, 599, 837, 886, 1193, 2257, 2841, 3222
PspPPI RGGWCCY 2 cut(s) 1712, 2840
PstI CTGCAG 1 cut(s) 1933
PstNI CAGNNNCTG 1 cut(s) 795
PsuI RGATCY 5 cut(s) 504, 1237, 1776, 2830, 3298
RsaI GTAC 8 cut(s) 103, 232, 404, 837, 2016, 2785, 3031, 3222
RsaNI GTAC 8 cut(s) 102, 231, 403, 836, 2015, 2784, 3030, 3221
RseI CAYNNNNRTG 2 cut(s) 1997, 2993
SapI GCTCTTC 1 cut(s) 1223
SatI GCNGC 5 cut(s) 265, 1932, 2394, 3064, 3100
ScaI AGTACT 3 cut(s) 232, 2016, 2785
SchI GAGTC 5 cut(s) 278, 793, 959, 2571, 2672
ScrFI CCNGG 6 cut(s) 19, 683, 747, 1911, 2362, 2495
SfaNI GCATC 6 cut(s) 35, 68, 920, 1483, 2380, 2405
SfcI CTRYAG 2 cut(s) 1704, 1929
SinI GGWCC 9 cut(s) 597, 1609, 1712, 1747, 2238, 2255, 2840, 3091, 3308
SmiMI CAYNNNNRTG 2 cut(s) 1997, 2993
SmlI CTYRAG 6 cut(s) 500, 781, 1168, 1315, 1579, 1937
SmoI CTYRAG 6 cut(s) 500, 781, 1168, 1315, 1579, 1937
SsiI CCGC 4 cut(s) 265, 2694, 2867, 3100
StyD4I CCNGG 6 cut(s) 17, 681, 745, 1909, 2360, 2493
StyI CCWWGG 2 cut(s) 2413, 3311
TaiI ACGT 2 cut(s) 125, 2593
TaqI TCGA 3 cut(s) 129, 288, 2452
TaqII GACCGA 1 cut(s) 3074
TatI WGTACW 3 cut(s) 230, 2014, 2783
TauI GCSGC 2 cut(s) 267, 3102
TfiI GAWTC 7 cut(s) 285, 709, 750, 1033, 2503, 2743, 2773
TscAI CASTG 8 cut(s) 104, 361, 624, 1139, 1975, 2266, 2984, 3073
TseFI GTSAC 6 cut(s) 579, 590, 1156, 1319, 1726, 2949
TseI GCWGC 3 cut(s) 1931, 2393, 3063
Tsp45I GTSAC 6 cut(s) 579, 590, 1156, 1319, 1726, 2949
TspGWI ACGGA 3 cut(s) 694, 1725, 2195
TspRI CASTG 8 cut(s) 104, 361, 624, 1139, 1975, 2266, 2984, 3073
Van91I CCANNNNNTGG 1 cut(s) 2764
Vha464I CTTAAG 2 cut(s) 1168, 1315
VpaK11BI GGWCC 9 cut(s) 597, 1609, 1712, 1747, 2238, 2255, 2840, 3091, 3308
VspI ATTAAT 1 cut(s) 2445
XbaI TCTAGA 2 cut(s) 2083, 3229
XceI RCATGY 1 cut(s) 3007
XmnI GAANNNNTTC 1 cut(s) 1089
ZrmI AGTACT 3 cut(s) 232, 2016, 2785
Zsp2I ATGCAT 3 cut(s) 913, 2056, 2436
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.