RLG00000024886

receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Reverse (-)
40058245 .. 40061899
3655 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000024886

Sequence Viewer

Length: 1956 bp
ATGAAGCAGCCAAACTCAGATATCTCAATAAGAAGCACCAATGGCCATGTTCTGGGTATTGACCTCAGCAGTGAATCAATCTCAGGTGGCATTGACAATTCCAGCAGTCTCTTCCATCTTCAAAATCTTCAAAGCCTCAATTTGGCCTTCAACCTCAATCTTGGTAACGGCTCTCAATCAATTCCATCTGGAATCGGGCAGCTCATGAATTTGAGGTATCTAAATTTATCTTACAATGCTTATTCAGGGAAAATTCCGATTGAGATTTCACGCTTGACGAGGTTGGTAGTTCTTGATATTTCTGGAACATTTCCAAAAGTGATCTTTCAATTACCTTCTCTTCGTAAGATTAGCCTTTCGGGAAGTGAAAACCTTGATGGTTCCTTGCCAGAATTTCTAAAGAATGGATCTCTTCAGTACCTGGATCTAAGGGGGACTAACTTTTCAGGGGGCAAGATACCCAACTGGATTTGGAGGTTTAGAGATCTCGAGCACCTAAATCTTTCGTGTAACTCTCTAGAAACTCTAGAAGGTCATACAATCAATCTCACTTCTATGCAATCCCTTGACCTTCATTCCAACAAGCTTCATGGGAAAATCCCAATTTTCTCGTCACCTAACATGCTTTATCTGGATTGCTCAAGGAACAACTTCAACTCTACCATACCGACTACCATTGAAGATATGATTCTTCACACTAGATTCTTCTCTATTGCTAGCAATAACCTTCAAGGGATCATTCCTGGATCAATATGCAATTCACTTTACCTGGAGGTTCTTGATCTATCCAATAATTCCTTGAGTGGCACAGTTCCTCACTGCTTGACTACAATGAGCACTCTTTCAGTACTTAATTTAAGGAGAAACAATCTTAGAAATGTAGACATGTTGTCTCACAATTGCAGTTTGCAAACTCTAGACATCAGTGAAAATCATATACAAAGTCAGTTTCTAAAATCACTCGTCAATTGCCCTAAATTACGGGTTCTGAACCTTGGAAAGAATCAAATAACCGGTCCATTTCCATGCTTTTTGAAGGACATATCCACCTTGCGTGTCCTTATCTTGAGATCCAATAAATTTTATGGAGGTATTGGATGTCCCAAGATAAATGGCACTTGGCCAATGCTTCAAATCATAGACCTAGCTCACAATAATTTTAGAGGAAATGTACCAGGGATAGCATTGACAACTTGGCAGGCAATGATGGCTAATGAAGATGATGCCTCATCAAAGCTCAATCACCTTCAATTCCAGAACAGCTCTAGTGGAATTTATTATCAGGATACAGTTACGATTACTGTCAAAGGTTTTGAGATAGAGCTGATAAAGATTTTAACAGTCTTCACCTCAATTGATTTCTCATGCAACAAGTTCAACGGAGCAATACCTTATGAAATTGGAGAACTCAAATCACTGCATATCCTCAACTTGTCCAATAATGCTTTCATAGGTGCAATTCCACCATCATTAAGCAACTTGAGTCAGCTAGAGTCTTTAGACCTCTCACAGAACACCTTGAGCGGTCAAATTCCACCACAGCTTACAAAACTCACTTTCCTTTCAGTTTTGAATTTTTCACATAATCAATTGGTCGGCAAGATTCCTAGCAGTAACCAGTTTCCAACATTTCCAAAATCTTCCTTTGAAGGAAACAAAGATTTATTTGGGCCTCCTTTGACCGAAGAAAACCGAACAAGGTTGTCACCTCCGGCAACGAAAAGAAGCCATCCAAGTTCTGGAGATGAGATTGATTGGAATATCATCATTGTTGAGATTGGATTTACATGTGGGTTCGGAATTGCGGTTGGATCACTTTTGTGTTGCAAGAGATGGAGGAAATGGTATTATATAACTATGTATCGCATTCTTGTGAAGATATTTCCTCAGCTGGAACAAAGGTTTGGTCATCACAGAAGACATGTGTATACAGGCGCAAGGTACTGGAGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

652

Amino Acids

72.77

Weight (kDa)

9.01

Isoelectric Point (pI)

43.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 37 - 121 4.5e-07 Leucine-rich repeat region
LRR_8 PF13855 237 - 291 7.9e-07 Leucine rich repeat
LRR_8 PF13855 302 - 361 1.2e-06 Leucine rich repeat
LRR_4 PF12799 302 - 338 2.9e-06 Leucine Rich repeats (2 copies)
LRR_14 PF23598 462 - 527 2.6e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 52, 1739
AccBSI CCGCTC 1 cut(s) 1524
AccI GTMKAC 2 cut(s) 882, 1928
AciI CCGC 2 cut(s) 1524, 1805
AclWI GGATC 6 cut(s) 415, 432, 743, 754, 1065, 1819
AcoI YGGCCR 2 cut(s) 43, 1121
AcsI RAATTY 8 cut(s) 208, 223, 252, 392, 1079, 1272, 1530, 1573
AcuI CTGAAG 1 cut(s) 398
AfaI GTAC 4 cut(s) 419, 849, 1173, 1943
AfiI CCNNNNNNNGG 3 cut(s) 52, 142, 1739
AflIII ACRYGT 3 cut(s) 885, 1787, 1921
AgeI ACCGGT 1 cut(s) 1013
AhdI GACNNNNNGTC 1 cut(s) 889
AjnI CCWGG 4 cut(s) 420, 742, 768, 1174
AjuI GAANNNNNNNTTGG 4 cut(s) 1430, 1462, 1887, 1919
AleI CACNNNNGTG 1 cut(s) 1819
AluBI AGCT 9 cut(s) 202, 586, 1148, 1237, 1263, 1324, 1489, 1543, 1891
AluI AGCT 9 cut(s) 202, 586, 1148, 1237, 1263, 1324, 1489, 1543, 1891
Alw21I GWGCWC 2 cut(s) 495, 839
Alw26I GTCTC 3 cut(s) 113, 897, 1942
AlwI GGATC 6 cut(s) 415, 432, 743, 754, 1065, 1819
AlwNI CAGNNNCTG 1 cut(s) 421
Ama87I CYCGRG 1 cut(s) 488
AoxI GGCC 4 cut(s) 43, 144, 1121, 1670
ApeKI GCWGC 2 cut(s) 7, 199
ApoI RAATTY 8 cut(s) 208, 223, 252, 392, 1079, 1272, 1530, 1573
ArsI GACNNNNNNTTYG 4 cut(s) 1000, 1032, 1891, 1923
AsiGI ACCGGT 1 cut(s) 1013
Asp700I GAANNNNTTC 1 cut(s) 650
AspLEI GCGC 1 cut(s) 1937
AspS9I GGNCC 2 cut(s) 1016, 1670
AsuHPI GGTGA 4 cut(s) 606, 1235, 1339, 1698
AsuNHI GCTAGC 1 cut(s) 716
AvaI CYCGRG 1 cut(s) 488
AvaII GGWCC 1 cut(s) 1016
BalI TGGCCA 2 cut(s) 45, 1123
BbsI GAAGAC 2 cut(s) 1336, 1924
Bbv12I GWGCWC 2 cut(s) 495, 839
BbvCI CCTCAGC 2 cut(s) 65, 1887
BbvI GCAGC 2 cut(s) 19, 211
BccI CCATC 7 cut(s) 123, 193, 371, 1201, 1474, 1737, 1827
BceAI ACGGC 1 cut(s) 184
BciT130I CCWGG 4 cut(s) 422, 744, 770, 1176
BciVI GTATCC 1 cut(s) 1279
BcoDI GTCTC 3 cut(s) 113, 897, 1942
BfaI CTAG 9 cut(s) 518, 527, 699, 717, 917, 1145, 1266, 1490, 1608
BfuI GTATCC 1 cut(s) 1279
BglII AGATCT 1 cut(s) 484
BisI GCNGC 2 cut(s) 8, 200
BlsI GCNGC 2 cut(s) 9, 201
BmcAI AGTACT 1 cut(s) 849
Bme1390I CCNGG 4 cut(s) 422, 744, 770, 1176
Bme18I GGWCC 1 cut(s) 1016
BmeRI GACNNNNNGTC 1 cut(s) 889
BmeT110I CYCGRG 1 cut(s) 488
BmgT120I GGNCC 2 cut(s) 1016, 1670
BmiI GGNNCC 1 cut(s) 382
BmrFI CCNGG 4 cut(s) 422, 744, 770, 1176
BmsI GCATC 1 cut(s) 1213
BmtI GCTAGC 1 cut(s) 720
BpiI GAAGAC 2 cut(s) 1336, 1924
BpmI CTGGAG 2 cut(s) 791, 1761
Bpu10I CCTNAGC 2 cut(s) 65, 1887
BpuEI CTTGAG 5 cut(s) 625, 820, 1087, 1501, 1540
BsaJI CCNNGG 2 cut(s) 994, 1175
BsaWI WCCGGW 1 cut(s) 1013
Bsc4I CCNNNNNNNGG 3 cut(s) 52, 142, 1739
Bse118I RCCGGY 1 cut(s) 1013
Bse1I ACTGG 3 cut(s) 470, 1618, 1949
Bse3DI GCAATG 1 cut(s) 1209
BseBI CCWGG 4 cut(s) 422, 744, 770, 1176
BseDI CCNNGG 2 cut(s) 994, 1175
BseGI GGATG 2 cut(s) 1103, 1729
BseLI CCNNNNNNNGG 3 cut(s) 52, 142, 1739
BseMI GCAATG 1 cut(s) 1209
BseMII CTCAG 4 cut(s) 30, 79, 96, 1901
BseNI ACTGG 3 cut(s) 470, 1618, 1949
BseXI GCAGC 2 cut(s) 19, 211
BshFI GGCC 4 cut(s) 45, 146, 1123, 1672
BshTI ACCGGT 1 cut(s) 1013
BsiHKAI GWGCWC 2 cut(s) 495, 839
BsiHKCI CYCGRG 1 cut(s) 488
BsiSI CCGG 2 cut(s) 1014, 1712
BslFI GGGAC 2 cut(s) 448, 1086
BslI CCNNNNNNNGG 3 cut(s) 52, 142, 1739
BsmAI GTCTC 3 cut(s) 113, 897, 1942
BsmBI CGTCTC 1 cut(s) 1942
BsmFI GGGAC 2 cut(s) 448, 1086
BsmI GAATGC 1 cut(s) 1866
BsnI GGCC 4 cut(s) 45, 146, 1123, 1672
BsoBI CYCGRG 1 cut(s) 488
Bsp1286I GDGCHC 2 cut(s) 495, 839
Bsp143I GATC 9 cut(s) 321, 407, 424, 484, 735, 746, 781, 1070, 1811
BspACI CCGC 2 cut(s) 1524, 1805
BspANI GGCC 4 cut(s) 45, 146, 1123, 1672
BspCNI CTCAG 4 cut(s) 29, 78, 95, 1900
BspHI TCATGA 1 cut(s) 204
BspLI GGNNCC 1 cut(s) 382
BspOI GCTAGC 1 cut(s) 720
BspPI GGATC 6 cut(s) 415, 432, 743, 754, 1065, 1819
BsrBI CCGCTC 1 cut(s) 1524
BsrDI GCAATG 1 cut(s) 1209
BsrFI RCCGGY 1 cut(s) 1013
BsrI ACTGG 3 cut(s) 470, 1618, 1949
BssAI RCCGGY 1 cut(s) 1013
BssECI CCNNGG 2 cut(s) 994, 1175
BssMI GATC 9 cut(s) 321, 407, 424, 484, 735, 746, 781, 1070, 1811
BssNAI GTATAC 1 cut(s) 1929
BssT1I CCWWGG 1 cut(s) 994
Bst1107I GTATAC 1 cut(s) 1929
Bst2UI CCWGG 4 cut(s) 422, 744, 770, 1176
Bst4CI ACNGT 4 cut(s) 811, 1291, 1303, 1342
Bst6I CTCTTC 3 cut(s) 116, 345, 417
BstC8I GCNNGC 2 cut(s) 718, 1200
BstDEI CTNAG 6 cut(s) 16, 65, 82, 428, 872, 1887
BstF5I GGATG 2 cut(s) 1103, 1729
BstHHI GCGC 1 cut(s) 1937
BstKTI GATC 9 cut(s) 324, 410, 427, 487, 738, 749, 784, 1073, 1814
BstMAI GTCTC 3 cut(s) 113, 897, 1942
BstMBI GATC 9 cut(s) 321, 407, 424, 484, 735, 746, 781, 1070, 1811
BstMWI GCNNNNNNNGC 2 cut(s) 42, 1208
BstNI CCWGG 4 cut(s) 422, 744, 770, 1176
BstNSI RCATGY 4 cut(s) 625, 889, 1791, 1925
BstSCI CCNGG 4 cut(s) 420, 742, 768, 1174
BstV1I GCAGC 2 cut(s) 19, 211
BstV2I GAAGAC 2 cut(s) 1336, 1924
BstX2I RGATCY 4 cut(s) 407, 424, 484, 1070
BstYI RGATCY 4 cut(s) 407, 424, 484, 1070
BstZ17I GTATAC 1 cut(s) 1929
BsuI GTATCC 1 cut(s) 1279
BsuRI GGCC 4 cut(s) 45, 146, 1123, 1672
BtsCI GGATG 2 cut(s) 1103, 1729
BtsI GCAGTG 3 cut(s) 76, 817, 1415
BtsIMutI CAGTG 4 cut(s) 76, 817, 931, 1415
Cac8I GCNNGC 2 cut(s) 718, 1200
CaiI CAGNNNCTG 1 cut(s) 421
CciI TCATGA 1 cut(s) 204
CfoI GCGC 1 cut(s) 1937
Cfr10I RCCGGY 1 cut(s) 1013
Cfr13I GGNCC 2 cut(s) 1016, 1670
Csp6I GTAC 4 cut(s) 418, 848, 1172, 1942
CspAI ACCGGT 1 cut(s) 1013
CviAII CATG 9 cut(s) 47, 205, 590, 622, 886, 1026, 1365, 1788, 1922
CviQI GTAC 4 cut(s) 418, 848, 1172, 1942
DdeI CTNAG 6 cut(s) 16, 65, 82, 428, 872, 1887
DpnI GATC 9 cut(s) 323, 409, 426, 486, 737, 748, 783, 1072, 1813
DpnII GATC 9 cut(s) 321, 407, 424, 484, 735, 746, 781, 1070, 1811
DriI GACNNNNNGTC 1 cut(s) 889
EaeI YGGCCR 2 cut(s) 43, 1121
Eam1104I CTCTTC 3 cut(s) 116, 345, 417
Eam1105I GACNNNNNGTC 1 cut(s) 889
EarI CTCTTC 3 cut(s) 116, 345, 417
Eco130I CCWWGG 1 cut(s) 994
Eco32I GATATC 1 cut(s) 22
Eco47I GGWCC 1 cut(s) 1016
Eco57I CTGAAG 1 cut(s) 398
Eco88I CYCGRG 1 cut(s) 488
EcoRII CCWGG 4 cut(s) 420, 742, 768, 1174
EcoRV GATATC 1 cut(s) 22
EcoT14I CCWWGG 1 cut(s) 994
ErhI CCWWGG 1 cut(s) 994
Esp3I CGTCTC 1 cut(s) 1942
FaeI CATG 9 cut(s) 50, 208, 593, 625, 889, 1029, 1368, 1791, 1925
FaqI GGGAC 2 cut(s) 448, 1086
FatI CATG 9 cut(s) 46, 204, 589, 621, 885, 1025, 1364, 1787, 1921
FblI GTMKAC 2 cut(s) 882, 1928
Fnu4HI GCNGC 2 cut(s) 8, 200
FokI GGATG 2 cut(s) 1110, 1716
Fsp4HI GCNGC 2 cut(s) 8, 200
FspBI CTAG 9 cut(s) 518, 527, 699, 717, 917, 1145, 1266, 1490, 1608
GlaI GCGC 1 cut(s) 1936
GluI GCNGC 2 cut(s) 8, 200
GsuI CTGGAG 2 cut(s) 791, 1761
HaeIII GGCC 4 cut(s) 45, 146, 1123, 1672
HapII CCGG 2 cut(s) 1014, 1712
HhaI GCGC 1 cut(s) 1937
Hin1II CATG 9 cut(s) 50, 208, 593, 625, 889, 1029, 1368, 1791, 1925
Hin6I GCGC 1 cut(s) 1935
HinP1I GCGC 1 cut(s) 1935
HindIII AAGCTT 1 cut(s) 584
HinfI GANTC 8 cut(s) 74, 192, 688, 702, 1003, 1483, 1493, 1603
HpaII CCGG 2 cut(s) 1014, 1712
HphI GGTGA 4 cut(s) 606, 1235, 1339, 1698
Hpy166II GTNNAC 2 cut(s) 883, 1929
Hpy188I TCNGA 4 cut(s) 19, 258, 990, 1799
Hpy8I GTNNAC 2 cut(s) 883, 1929
HpyAV CCTTC 8 cut(s) 157, 345, 524, 581, 737, 1030, 1256, 1643
HpyCH4III ACNGT 4 cut(s) 811, 1291, 1303, 1342
HpyCH4IV ACGT 1 cut(s) 1951
HpyCH4V TGCA 8 cut(s) 559, 756, 903, 910, 1368, 1420, 1457, 1827
HpyF10VI GCNNNNNNNGC 2 cut(s) 42, 1208
HpyF3I CTNAG 6 cut(s) 16, 65, 82, 428, 872, 1887
HpySE526I ACGT 1 cut(s) 1951
Hsp92II CATG 9 cut(s) 50, 208, 593, 625, 889, 1029, 1368, 1791, 1925
HspAI GCGC 1 cut(s) 1935
Kzo9I GATC 9 cut(s) 321, 407, 424, 484, 735, 746, 781, 1070, 1811
LmnI GCTCC 1 cut(s) 1382
Lsp1109I GCAGC 2 cut(s) 19, 211
LweI GCATC 1 cut(s) 1213
MaeI CTAG 9 cut(s) 518, 527, 699, 717, 917, 1145, 1266, 1490, 1608
MaeII ACGT 1 cut(s) 1951
MaeIII GTNAC 6 cut(s) 164, 509, 612, 1291, 1613, 1704
MalI GATC 9 cut(s) 323, 409, 426, 486, 737, 748, 783, 1072, 1813
MbiI CCGCTC 1 cut(s) 1524
MboI GATC 9 cut(s) 321, 407, 424, 484, 735, 746, 781, 1070, 1811
MfeI CAATTG 4 cut(s) 898, 967, 1353, 1589
MflI RGATCY 4 cut(s) 407, 424, 484, 1070
MhlI GDGCHC 2 cut(s) 495, 839
MlsI TGGCCA 2 cut(s) 45, 1123
MluNI TGGCCA 2 cut(s) 45, 1123
MlyI GAGTC 2 cut(s) 1492, 1502
MmeI TCCRAC 3 cut(s) 603, 1649, 1789
Mox20I TGGCCA 2 cut(s) 45, 1123
MroXI GAANNNNTTC 1 cut(s) 650
MscI TGGCCA 2 cut(s) 45, 1123
MseI TTAA 4 cut(s) 852, 857, 1337, 1472
MslI CAYNNNNRTG 4 cut(s) 554, 1024, 1819, 1871
Msp20I TGGCCA 2 cut(s) 45, 1123
MspA1I CMGCKG 1 cut(s) 1891
MspI CCGG 2 cut(s) 1014, 1712
MspR9I CCNGG 4 cut(s) 422, 744, 770, 1176
MunI CAATTG 4 cut(s) 898, 967, 1353, 1589
Mva1269I GAATGC 1 cut(s) 1866
MvaI CCWGG 4 cut(s) 422, 744, 770, 1176
MwoI GCNNNNNNNGC 2 cut(s) 42, 1208
NdeII GATC 9 cut(s) 321, 407, 424, 484, 735, 746, 781, 1070, 1811
NheI GCTAGC 1 cut(s) 716
NlaIII CATG 9 cut(s) 50, 208, 593, 625, 889, 1029, 1368, 1791, 1925
NlaIV GGNNCC 1 cut(s) 382
NmuCI GTSAC 2 cut(s) 612, 1704
NspI RCATGY 4 cut(s) 625, 889, 1791, 1925
OliI CACNNNNGTG 1 cut(s) 1819
PaeR7I CTCGAG 1 cut(s) 488
PagI TCATGA 1 cut(s) 204
PciI ACATGT 3 cut(s) 885, 1787, 1921
PctI GAATGC 1 cut(s) 1866
PdmI GAANNNNTTC 1 cut(s) 650
PfeI GAWTC 6 cut(s) 74, 192, 688, 702, 1003, 1603
PflMI CCANNNNNTGG 2 cut(s) 52, 1739
PfoI TCCNGGA 1 cut(s) 742
PinAI ACCGGT 1 cut(s) 1013
PkrI GCNGC 2 cut(s) 9, 201
PleI GAGTC 2 cut(s) 1491, 1501
PpsI GAGTC 2 cut(s) 1491, 1501
PscI ACATGT 3 cut(s) 885, 1787, 1921
Psp6I CCWGG 4 cut(s) 420, 742, 768, 1174
PspGI CCWGG 4 cut(s) 420, 742, 768, 1174
PspN4I GGNNCC 1 cut(s) 382
PspPI GGNCC 2 cut(s) 1016, 1670
PstNI CAGNNNCTG 1 cut(s) 421
PsuI RGATCY 4 cut(s) 407, 424, 484, 1070
PvuII CAGCTG 1 cut(s) 1891
RsaI GTAC 4 cut(s) 419, 849, 1173, 1943
RsaNI GTAC 4 cut(s) 418, 848, 1172, 1942
RseI CAYNNNNRTG 4 cut(s) 554, 1024, 1819, 1871
SaqAI TTAA 4 cut(s) 852, 857, 1337, 1472
SatI GCNGC 2 cut(s) 8, 200
Sau3AI GATC 9 cut(s) 321, 407, 424, 484, 735, 746, 781, 1070, 1811
Sau96I GGNCC 2 cut(s) 1016, 1670
ScaI AGTACT 1 cut(s) 849
SchI GAGTC 2 cut(s) 1492, 1502
ScrFI CCNGG 4 cut(s) 422, 744, 770, 1176
SduI GDGCHC 2 cut(s) 495, 839
SfaNI GCATC 1 cut(s) 1213
Sfr274I CTCGAG 1 cut(s) 488
SinI GGWCC 1 cut(s) 1016
SlaI CTCGAG 1 cut(s) 488
SmiMI CAYNNNNRTG 4 cut(s) 554, 1024, 1819, 1871
SmlI CTYRAG 6 cut(s) 488, 640, 799, 1066, 1480, 1519
SmoI CTYRAG 6 cut(s) 488, 640, 799, 1066, 1480, 1519
SsiI CCGC 2 cut(s) 1524, 1805
SspMI CTAG 9 cut(s) 518, 527, 699, 717, 917, 1145, 1266, 1490, 1608
StyD4I CCNGG 4 cut(s) 420, 742, 768, 1174
StyI CCWWGG 1 cut(s) 994
TaaI ACNGT 4 cut(s) 811, 1291, 1303, 1342
TaiI ACGT 1 cut(s) 1954
TaqI TCGA 1 cut(s) 489
TaqII GACCGA 1 cut(s) 1697
TatI WGTACW 1 cut(s) 847
TfiI GAWTC 6 cut(s) 74, 192, 688, 702, 1003, 1603
Tru1I TTAA 4 cut(s) 852, 857, 1337, 1472
Tru9I TTAA 4 cut(s) 852, 857, 1337, 1472
TscAI CASTG 4 cut(s) 76, 824, 931, 1422
TseFI GTSAC 2 cut(s) 612, 1704
TseI GCWGC 2 cut(s) 7, 199
Tsp45I GTSAC 2 cut(s) 612, 1704
TspDTI ATGAA 7 cut(s) 17, 221, 563, 578, 1230, 1410, 1438
TspGWI ACGGA 1 cut(s) 1395
TspRI CASTG 4 cut(s) 76, 824, 931, 1422
Van91I CCANNNNNTGG 2 cut(s) 52, 1739
VpaK11BI GGWCC 1 cut(s) 1016
XapI RAATTY 8 cut(s) 208, 223, 252, 392, 1079, 1272, 1530, 1573
XbaI TCTAGA 3 cut(s) 517, 526, 916
XceI RCATGY 4 cut(s) 625, 889, 1791, 1925
XcmI CCANNNNNNNNNTGG 1 cut(s) 1736
XhoI CTCGAG 1 cut(s) 488
XmiI GTMKAC 2 cut(s) 882, 1928
XmnI GAANNNNTTC 1 cut(s) 650
XspI CTAG 9 cut(s) 518, 527, 699, 717, 917, 1145, 1266, 1490, 1608
ZrmI AGTACT 1 cut(s) 849
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.