pycom12g16470

Leucine rich repeat N-terminal domain

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Forward (+)
18780356 .. 18782122
1767 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g16470.2

Sequence Viewer

Length: 1722 bp
ATGTCCATCTTTAATCTTCGAGGGCTAAAGATACTTTCATTTTCTTCAAACAACTTCAGTGGCTCGTTTCCTCTCAACAATAGATTGTTGATTACTTATGCTGATACTAATTCCTCCTATTCTTCATTTCCTCAACTTACCACTTTGAAATTGTCTTCTGGAAAGTTGGGAGTGTTTCCTGATTTCTTGAGAAATCAATCTCGATTAGGCTATTTGGACCTTTCGTTAAACCAGATTCCTGGTGAGATACCCAACTGGATTTGGAGGCTCAATAATCTTATTCAACTAAATCTTTCATGCAACTCCTTAGTAACACTAGAAGGTCCTTTACTTGAATATCCTCCTCTGTCTACGCTTGACCTTCATTCCAACCAGTTTCAGGGACAAATCCCAATGCTTCCACGATGGGCCACTTATCTGGATTACTCAAGAAATAATTTCAGCTCAAGCATTCCGGCTGATATCGGTGATTTCTTTTCTTTCACTATGTTCTTCTCTCTTTCAAGCAATAACTTCCATGGGATCATTCCAGAATCAGTATGCGAGGCGACATTTCTTCAAGTTCTTGATCTATCAAATAATTCCTTAAGTGGTATGATTCCCCAGTGCTTAACTGCAAGGAGCAGGTCAATTGGAGTACTTAATTTAAGGACAAACAAACTTACTGGTGCTATTCCTGATATATTTCCTCGATATTGTAGTTTGAAAACACTAGACCTGAATGGAAATCAGGTAGGAGGCAAATTTCCAGAATCTCTTGGCAATTGCAAACTGCTAGAGGTGTTGAACCTTGGAAACAATCAGATCAGTGGTACTTTTCCACGCTCGTTAAACAAAATGCCCCTATTGCATGTTCTTGTTTTGCGATCAAACAAATTTTATGGGCGCATTGGATGTCCTAAGACCTATGGCAGCTGGCCAATGCTTCAAATTATTGACCTAGCTCACAACAATTTCAGTGGTCAAATACACGGAAGATGCTTGAAAACCTGGCAGGCGATGATGGCTGACGAAGATGCTAGCCTGTCACAACTGGAACACATCAAATTTCAGGTCCTATCATCAATCTCTCAGATATATTACGACGATAAAGTGCTTGTTACCACCAAAGGTCTAGAGATGGAGCTGGTGAAGATTTTAACTATCTTCACCTCAATTGACTTCTCCGGGAACAAATTCACCGGATCAATACCTGTGGAAATGGGAGTATTCAAATCACTATATGCCCTCAACTTGTCTAGTAATGCTCTAACAGGTGAAATCCCATCATCTTTGGGAAACTTACGACATGTTGGGTCCTTGGACTTGTCGAACAACAGCCTGAGCGGGGAAATTCCATCACAGCTCACAAAGCTCACGTTCCTTGCATTCTTGAATCTCTCAAACAATGAACTGACCGGAATGATCCCAACCAGCACTCAGTTTTCGACATTTCCAACAGCTTCCTTTGCAGGCAATGAAGGGTTGTGGGGGCCTCCTTTGACAGGTTATATCCCCTCAGGATTGCCAATACCACCACCACCACCGAAAAAAGGTCATTATAATGCTCAACCTGAAATTGATTTTGATCTTATAAGTGCTGAGATAGGATTTATCTTTGGCCTATCTTTGGCCTTGGAGCATTCATCGGGCCTCTCGTTTTCTGTAAGCGATGGAGGATATGGTATTACAAAACTGTGGAGAACATCTTCTTCAAGATATTCCCTCGTCTGGATACAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

574

Amino Acids

63.18

Weight (kDa)

7.1

Isoelectric Point (pI)

33.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1542, 1574
Acc36I ACCTGC 1 cut(s) 615
AccBSI CCGCTC 1 cut(s) 1326
AccI GTMKAC 1 cut(s) 350
AciI CCGC 1 cut(s) 1326
AclWI GGATC 3 cut(s) 530, 1192, 1399
AcoI YGGCCR 1 cut(s) 917
AcsI RAATTY 5 cut(s) 743, 875, 1046, 1175, 1332
AcuI CTGAAG 1 cut(s) 40
AfaI GTAC 2 cut(s) 639, 814
AfiI CCNNNNNNNGG 6 cut(s) 379, 1327, 1484, 1532, 1609, 1710
AflII CTTAAG 1 cut(s) 586
AflIII ACRYGT 1 cut(s) 1288
AjnI CCWGG 2 cut(s) 238, 989
AluBI AGCT 7 cut(s) 444, 915, 944, 1126, 1345, 1354, 1442
AluI AGCT 7 cut(s) 444, 915, 944, 1126, 1345, 1354, 1442
AlwI GGATC 3 cut(s) 530, 1192, 1399
AoxI GGCC 6 cut(s) 408, 917, 1472, 1600, 1611, 1630
ApeKI GCWGC 1 cut(s) 912
ApoI RAATTY 5 cut(s) 743, 875, 1046, 1175, 1332
ArsI GACNNNNNNTTYG 2 cut(s) 1038, 1070
Asp700I GAANNNNTTC 2 cut(s) 1175, 1687
AspLEI GCGC 1 cut(s) 888
AspS9I GGNCC 7 cut(s) 217, 323, 408, 1054, 1296, 1472, 1630
AsuC2I CCSGG 1 cut(s) 1168
AsuHPI GGTGA 6 cut(s) 254, 479, 1141, 1141, 1171, 1268
AsuNHI GCTAGC 1 cut(s) 1019
AvaII GGWCC 4 cut(s) 217, 323, 1054, 1296
AxyI CCTNAGG 1 cut(s) 1498
BalI TGGCCA 1 cut(s) 919
BarI GAAGNNNNNNTAC 2 cut(s) 312, 344
BbsI GAAGAC 1 cut(s) 147
BbvI GCAGC 1 cut(s) 924
BccI CCATC 7 cut(s) 14, 399, 997, 1114, 1273, 1345, 1646
BciT130I CCWGG 2 cut(s) 240, 991
BciVI GTATCC 1 cut(s) 1707
BcnI CCSGG 1 cut(s) 1168
BfaI CTAG 7 cut(s) 317, 713, 776, 941, 1020, 1115, 1239
BfrI CTTAAG 1 cut(s) 586
BfuAI ACCTGC 1 cut(s) 615
BfuI GTATCC 1 cut(s) 1707
BisI GCNGC 1 cut(s) 913
BlsI GCNGC 1 cut(s) 914
BmcAI AGTACT 1 cut(s) 639
Bme1390I CCNGG 3 cut(s) 240, 991, 1168
Bme18I GGWCC 4 cut(s) 217, 323, 1054, 1296
BmgT120I GGNCC 7 cut(s) 217, 323, 408, 1054, 1296, 1472, 1630
BmiI GGNNCC 2 cut(s) 1297, 1473
BmrFI CCNGG 3 cut(s) 240, 991, 1168
BmrI ACTGGG 1 cut(s) 598
BmsI GCATC 2 cut(s) 968, 1006
BmtI GCTAGC 1 cut(s) 1023
BmuI ACTGGG 1 cut(s) 598
BpiI GAAGAC 1 cut(s) 147
Bpu10I CCTNAGC 1 cut(s) 1322
BpuEI CTTGAG 3 cut(s) 208, 412, 430
BpuMI CCSGG 1 cut(s) 1168
BsaBI GATNNNNATC 1 cut(s) 1566
BsaJI CCNNGG 4 cut(s) 517, 790, 1299, 1614
BsaWI WCCGGW 2 cut(s) 1181, 1397
Bsc4I CCNNNNNNNGG 6 cut(s) 379, 1327, 1484, 1532, 1609, 1710
Bse1I ACTGG 5 cut(s) 260, 373, 604, 670, 1038
Bse21I CCTNAGG 1 cut(s) 1498
Bse3DI GCAATG 1 cut(s) 1462
Bse8I GATNNNNATC 1 cut(s) 1566
BseBI CCWGG 2 cut(s) 240, 991
BseDI CCNNGG 4 cut(s) 517, 790, 1299, 1614
BseGI GGATG 1 cut(s) 899
BseJI GATNNNNATC 1 cut(s) 1566
BseLI CCNNNNNNNGG 6 cut(s) 379, 1327, 1484, 1532, 1609, 1710
BseMI GCAATG 1 cut(s) 1462
BseMII CTCAG 5 cut(s) 1085, 1313, 1433, 1512, 1572
BseNI ACTGG 5 cut(s) 260, 373, 604, 670, 1038
BseRI GAGGAG 1 cut(s) 333
BseXI GCAGC 1 cut(s) 924
BshFI GGCC 6 cut(s) 410, 919, 1474, 1602, 1613, 1632
BsiSI CCGG 4 cut(s) 455, 1167, 1182, 1398
BslFI GGGAC 1 cut(s) 396
BslI CCNNNNNNNGG 6 cut(s) 379, 1327, 1484, 1532, 1609, 1710
BsmFI GGGAC 1 cut(s) 396
BsmI GAATGC 3 cut(s) 450, 1367, 1621
BsnI GGCC 6 cut(s) 410, 919, 1474, 1602, 1613, 1632
Bsp143I GATC 7 cut(s) 522, 568, 804, 866, 1184, 1404, 1567
Bsp19I CCATGG 1 cut(s) 517
BspACI CCGC 1 cut(s) 1326
BspANI GGCC 6 cut(s) 410, 919, 1474, 1602, 1613, 1632
BspCNI CTCAG 5 cut(s) 1084, 1314, 1432, 1511, 1573
BspLI GGNNCC 2 cut(s) 1297, 1473
BspMI ACCTGC 1 cut(s) 615
BspOI GCTAGC 1 cut(s) 1023
BspPI GGATC 3 cut(s) 530, 1192, 1399
BspTI CTTAAG 1 cut(s) 586
BsrBI CCGCTC 1 cut(s) 1326
BsrDI GCAATG 1 cut(s) 1462
BsrI ACTGG 5 cut(s) 260, 373, 604, 670, 1038
BssECI CCNNGG 4 cut(s) 517, 790, 1299, 1614
BssMI GATC 7 cut(s) 522, 568, 804, 866, 1184, 1404, 1567
BssT1I CCWWGG 4 cut(s) 517, 790, 1299, 1614
Bst2UI CCWGG 2 cut(s) 240, 991
Bst4CI ACNGT 1 cut(s) 1677
BstAFI CTTAAG 1 cut(s) 586
BstC8I GCNNGC 4 cut(s) 917, 996, 1021, 1453
BstDEI CTNAG 7 cut(s) 307, 900, 1071, 1322, 1419, 1498, 1581
BstDSI CCRYGG 1 cut(s) 517
BstENI CCTNNNNNAGG 1 cut(s) 1482
BstF5I GGATG 1 cut(s) 899
BstHHI GCGC 1 cut(s) 888
BstKTI GATC 7 cut(s) 525, 571, 807, 869, 1187, 1407, 1570
BstMBI GATC 7 cut(s) 522, 568, 804, 866, 1184, 1404, 1567
BstMWI GCNNNNNNNGC 4 cut(s) 847, 1004, 1351, 1448
BstNI CCWGG 2 cut(s) 240, 991
BstNSI RCATGY 2 cut(s) 854, 1292
BstSCI CCNGG 3 cut(s) 238, 989, 1166
BstV1I GCAGC 1 cut(s) 924
BstV2I GAAGAC 1 cut(s) 147
BstXI CCANNNNNNTGG 2 cut(s) 239, 418
Bsu36I CCTNAGG 1 cut(s) 1498
BsuI GTATCC 1 cut(s) 1707
BsuRI GGCC 6 cut(s) 410, 919, 1474, 1602, 1613, 1632
BtgI CCRYGG 1 cut(s) 517
BtgZI GCGATG 2 cut(s) 1013, 1665
BtsCI GGATG 1 cut(s) 899
BtsIMutI CAGTG 4 cut(s) 64, 611, 814, 964
BveI ACCTGC 1 cut(s) 615
Cac8I GCNNGC 4 cut(s) 917, 996, 1021, 1453
CfoI GCGC 1 cut(s) 888
Cfr13I GGNCC 7 cut(s) 217, 323, 408, 1054, 1296, 1472, 1630
Csp6I GTAC 2 cut(s) 638, 813
CspCI CAANNNNNGTGG 6 cut(s) 40, 75, 940, 975, 1176, 1211
CviAII CATG 4 cut(s) 297, 518, 851, 1289
CviQI GTAC 2 cut(s) 638, 813
DdeI CTNAG 7 cut(s) 307, 900, 1071, 1322, 1419, 1498, 1581
DpnI GATC 7 cut(s) 524, 570, 806, 868, 1186, 1406, 1569
DpnII GATC 7 cut(s) 522, 568, 804, 866, 1184, 1404, 1567
EaeI YGGCCR 1 cut(s) 917
Eco130I CCWWGG 4 cut(s) 517, 790, 1299, 1614
Eco32I GATATC 1 cut(s) 463
Eco47I GGWCC 4 cut(s) 217, 323, 1054, 1296
Eco57I CTGAAG 1 cut(s) 40
Eco81I CCTNAGG 1 cut(s) 1498
EcoNI CCTNNNNNAGG 1 cut(s) 1482
EcoO109I RGGNCCY 4 cut(s) 323, 1054, 1296, 1472
EcoRII CCWGG 2 cut(s) 238, 989
EcoRV GATATC 1 cut(s) 463
EcoT14I CCWWGG 4 cut(s) 517, 790, 1299, 1614
ErhI CCWWGG 4 cut(s) 517, 790, 1299, 1614
FaeI CATG 4 cut(s) 300, 521, 854, 1292
FaqI GGGAC 1 cut(s) 396
FatI CATG 4 cut(s) 296, 517, 850, 1288
FauI CCCGC 1 cut(s) 1319
FblI GTMKAC 1 cut(s) 350
Fnu4HI GCNGC 1 cut(s) 913
FokI GGATG 1 cut(s) 906
Fsp4HI GCNGC 1 cut(s) 913
FspBI CTAG 7 cut(s) 317, 713, 776, 941, 1020, 1115, 1239
GlaI GCGC 1 cut(s) 887
GluI GCNGC 1 cut(s) 913
HaeIII GGCC 6 cut(s) 410, 919, 1474, 1602, 1613, 1632
HapII CCGG 4 cut(s) 455, 1167, 1182, 1398
HhaI GCGC 1 cut(s) 888
Hin1II CATG 4 cut(s) 300, 521, 854, 1292
Hin6I GCGC 1 cut(s) 886
HinP1I GCGC 1 cut(s) 886
HinfI GANTC 5 cut(s) 235, 533, 598, 752, 1375
HpaII CCGG 4 cut(s) 455, 1167, 1182, 1398
HphI GGTGA 6 cut(s) 254, 479, 1141, 1141, 1171, 1268
Hpy166II GTNNAC 1 cut(s) 351
Hpy188I TCNGA 2 cut(s) 804, 1074
Hpy8I GTNNAC 1 cut(s) 351
Hpy99I CGWCG 1 cut(s) 1088
HpyAV CCTTC 3 cut(s) 314, 371, 1454
HpyCH4III ACNGT 1 cut(s) 1677
HpyCH4IV ACGT 1 cut(s) 1358
HpyCH4V TGCA 6 cut(s) 300, 617, 768, 850, 1367, 1451
HpyF10VI GCNNNNNNNGC 4 cut(s) 847, 1004, 1351, 1448
HpyF3I CTNAG 7 cut(s) 307, 900, 1071, 1322, 1419, 1498, 1581
HpySE526I ACGT 1 cut(s) 1358
Hsp92II CATG 4 cut(s) 300, 521, 854, 1292
HspAI GCGC 1 cut(s) 886
Kzo9I GATC 7 cut(s) 522, 568, 804, 866, 1184, 1404, 1567
LmnI GCTCC 3 cut(s) 621, 1123, 1618
Lsp1109I GCAGC 1 cut(s) 924
LweI GCATC 2 cut(s) 968, 1006
MaeI CTAG 7 cut(s) 317, 713, 776, 941, 1020, 1115, 1239
MaeII ACGT 1 cut(s) 1358
MaeIII GTNAC 3 cut(s) 310, 1026, 1099
MalI GATC 7 cut(s) 524, 570, 806, 868, 1186, 1406, 1569
MbiI CCGCTC 1 cut(s) 1326
MboI GATC 7 cut(s) 522, 568, 804, 866, 1184, 1404, 1567
MfeI CAATTG 3 cut(s) 630, 763, 1155
MlsI TGGCCA 1 cut(s) 919
MluNI TGGCCA 1 cut(s) 919
MmeI TCCRAC 2 cut(s) 393, 1460
Mox20I TGGCCA 1 cut(s) 919
MroXI GAANNNNTTC 2 cut(s) 1175, 1687
MscI TGGCCA 1 cut(s) 919
MseI TTAA 8 cut(s) 12, 227, 587, 611, 642, 647, 830, 1139
MslI CAYNNNNRTG 1 cut(s) 1542
Msp20I TGGCCA 1 cut(s) 919
MspA1I CMGCKG 1 cut(s) 915
MspCI CTTAAG 1 cut(s) 586
MspI CCGG 4 cut(s) 455, 1167, 1182, 1398
MspR9I CCNGG 3 cut(s) 240, 991, 1168
MunI CAATTG 3 cut(s) 630, 763, 1155
Mva1269I GAATGC 3 cut(s) 450, 1367, 1621
MvaI CCWGG 2 cut(s) 240, 991
MwoI GCNNNNNNNGC 4 cut(s) 847, 1004, 1351, 1448
NciI CCSGG 1 cut(s) 1168
NcoI CCATGG 1 cut(s) 517
NdeII GATC 7 cut(s) 522, 568, 804, 866, 1184, 1404, 1567
NheI GCTAGC 1 cut(s) 1019
NlaIII CATG 4 cut(s) 300, 521, 854, 1292
NlaIV GGNNCC 2 cut(s) 1297, 1473
NmuCI GTSAC 1 cut(s) 1026
NspI RCATGY 2 cut(s) 854, 1292
PciI ACATGT 1 cut(s) 1288
PcsI WCGNNNNNNNCGW 1 cut(s) 1634
PctI GAATGC 3 cut(s) 450, 1367, 1621
PdmI GAANNNNTTC 2 cut(s) 1175, 1687
PfeI GAWTC 5 cut(s) 235, 533, 598, 752, 1375
PfoI TCCNGGA 1 cut(s) 1166
PkrI GCNGC 1 cut(s) 914
PpuMI RGGWCCY 3 cut(s) 323, 1054, 1296
PscI ACATGT 1 cut(s) 1288
PsiI TTATAA 2 cut(s) 1542, 1574
Psp5II RGGWCCY 3 cut(s) 323, 1054, 1296
Psp6I CCWGG 2 cut(s) 238, 989
PspGI CCWGG 2 cut(s) 238, 989
PspN4I GGNNCC 2 cut(s) 1297, 1473
PspPI GGNCC 7 cut(s) 217, 323, 408, 1054, 1296, 1472, 1630
PspPPI RGGWCCY 3 cut(s) 323, 1054, 1296
PvuII CAGCTG 1 cut(s) 915
RsaI GTAC 2 cut(s) 639, 814
RsaNI GTAC 2 cut(s) 638, 813
RseI CAYNNNNRTG 1 cut(s) 1542
SaqAI TTAA 8 cut(s) 12, 227, 587, 611, 642, 647, 830, 1139
SatI GCNGC 1 cut(s) 913
Sau3AI GATC 7 cut(s) 522, 568, 804, 866, 1184, 1404, 1567
Sau96I GGNCC 7 cut(s) 217, 323, 408, 1054, 1296, 1472, 1630
ScaI AGTACT 1 cut(s) 639
ScrFI CCNGG 3 cut(s) 240, 991, 1168
SfaNI GCATC 2 cut(s) 968, 1006
SinI GGWCC 4 cut(s) 217, 323, 1054, 1296
SmiMI CAYNNNNRTG 1 cut(s) 1542
SmlI CTYRAG 4 cut(s) 187, 427, 445, 586
SmoI CTYRAG 4 cut(s) 187, 427, 445, 586
SsiI CCGC 1 cut(s) 1326
SspMI CTAG 7 cut(s) 317, 713, 776, 941, 1020, 1115, 1239
StyD4I CCNGG 3 cut(s) 238, 989, 1166
StyI CCWWGG 4 cut(s) 517, 790, 1299, 1614
TaaI ACNGT 1 cut(s) 1677
TaiI ACGT 1 cut(s) 1361
TaqI TCGA 5 cut(s) 19, 202, 691, 1310, 1427
TatI WGTACW 1 cut(s) 637
TfiI GAWTC 5 cut(s) 235, 533, 598, 752, 1375
Tru1I TTAA 8 cut(s) 12, 227, 587, 611, 642, 647, 830, 1139
Tru9I TTAA 8 cut(s) 12, 227, 587, 611, 642, 647, 830, 1139
TscAI CASTG 4 cut(s) 64, 611, 814, 964
TseFI GTSAC 1 cut(s) 1026
TseI GCWGC 1 cut(s) 912
Tsp45I GTSAC 1 cut(s) 1026
TspDTI ATGAA 7 cut(s) 27, 114, 285, 353, 1404, 1473, 1614
TspGWI ACGGA 1 cut(s) 987
TspRI CASTG 4 cut(s) 64, 611, 814, 964
Vha464I CTTAAG 1 cut(s) 586
VpaK11BI GGWCC 4 cut(s) 217, 323, 1054, 1296
XagI CCTNNNNNAGG 1 cut(s) 1482
XapI RAATTY 5 cut(s) 743, 875, 1046, 1175, 1332
XbaI TCTAGA 1 cut(s) 1114
XceI RCATGY 2 cut(s) 854, 1292
XmiI GTMKAC 1 cut(s) 350
XmnI GAANNNNTTC 2 cut(s) 1175, 1687
XspI CTAG 7 cut(s) 317, 713, 776, 941, 1020, 1115, 1239
ZrmI AGTACT 1 cut(s) 639
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.