Rorug04G0127000

receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
20149175 .. 20154752
5578 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0127000.1

Sequence Viewer

Length: 1614 bp
ATGTTGATAACGGTCAGAGGACCCTTTTCTTCTTCTTCTCCGCTCTGCTTCAACAGCTTCTCTTATCCAACGCTGAAACGTTCAGTATGCAAACCCAGATTCTCTGTTCCCAGAAAACCCAACAGCATTACTTGTTGGAAGCTTGGCGTTCTATCCAGCAGCTCTGAAGCCTCAGTTTTTGATCCCTTGGGTATAAATTCAGATGTACATTCTGGTCTAAATGCTACCTTGGATAATTTCCTATGGCTATTTTCAAAACCGTTAGAGAGTGCTTCAAGTTCTAAGAAGGAGAAATCTAACTCCACTCGAGGATTAGCAGCTGCCATAGAAGACAGTTCCATTGATTTTGGAGACTTTTTCAAAGGCCCATTACCAGGGAAGTTTCTCATGCTGTTGGGATATCTGGCCTTATCTCGACTTGGAATATATATACCTCTTGGTGGGGTAAACCGTGACGCTTTTGTTGGAAATTTGGACCAGAACAGTTTGTTGAGCACTTTGGATTCATTTTCTGGAGGCGGCATTGGCCGACTTGGTATATGTTCACTTGGTATTGTTCCCTTCATCAATGCCCAGATTGTCTTCCAGCTCCTTGCACAAGTATATCCCAAGTTGCAGGATCTTCAGAAAAAAGAAGGTGAAGCAGGAAGAAAGAAAGTTCTGCGGTATACACAATATGCTTCGGTTGGGTTTGCAGTAGTCCAGGCAATTGGCCAAGTATTCTTCCTTCGCCCATATGTCAATGACTTCAGTACGGAGTGGGTTCTCTCATCTGTGATCTTATTGACTCTTGGCTCAGTATTGACAACATACATTGGAGAACGAATCTCAGACCTAAAACTTGGGAATGGCACATCTCTTTTGATATTCACAAGCATCATCTCCTACTTTCCAGCATCTGTTGGTAGGACTGTTGCACAGGCATTCCAAGATGGTAACTATGTTGGACTCGCCACCATCATTGCCTCCTTTTTTCTGTTGGTCCTTGGAATTGTGTATGTTCAGGAAGCAGAAAGGAAAATTCCAATTAATTATGCCTCAAGGTACACCAGCAGAAGTGCAGGTCCTCAAAGGTCTGCCTACCTCCCCTTTAAGGTAAATAGTTCTGGAGTAATGCCAATAATATTTTCTACATCATCATTAGCTCTTCCTGGCACTTTAGCACGCTTCACTGGTTTAGCTCCATTGAAAACGGCTGCAGTGGCTTTAAATCCAGGGGGTTCATTCTATCTCCCCACCAACATCCTTTTAATAGCCCTCTTCAACTACTACTACACTTTCCTACAATTGGATCCTGATGATGTAAGTGAACAGTTGAAGCGCCAAGGGGCATCAATTCCACTTGTACGGCCGGGTAAAAGCACAGCTGCATTTCTTAAGACGGTTTTAAGTCGAATATCAGTTCTAGGTTCAGCCTTTCTAGCAATCTTGGCTGCTGGTCCTGCTGTTGTCGAACAAGTCTCACACCTTACTGCATTTCGGGGATTTGCGGGCACATCTGTTCTCATTCTTGTTGGTTGCGCAACTGACACTGCACGTAAAGTTCAAGCTGAGATAATTTCTCAGAAGTACAAGAACATAGAGTTTTATAACATTGACAAGTATGACCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

537

Amino Acids

58.04

Weight (kDa)

9.49

Isoelectric Point (pI)

33.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SecY PF00344 180 - 511 1.4e-89 SecY
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1590
Acc16I TGCGCA 1 cut(s) 1522
Acc36I ACCTGC 1 cut(s) 1052
AccBSI CCGCTC 1 cut(s) 43
AccI GTMKAC 1 cut(s) 668
AciI CCGC 4 cut(s) 41, 519, 664, 1490
AclI AACGTT 1 cut(s) 79
AclWI GGATC 4 cut(s) 176, 627, 1286, 1299
AcoI YGGCCR 3 cut(s) 526, 712, 1349
AcsI RAATTY 3 cut(s) 196, 469, 1020
AcuI CTGAAG 3 cut(s) 186, 608, 733
AfaI GTAC 5 cut(s) 207, 754, 1046, 1347, 1571
AfiI CCNNNNNNNGG 4 cut(s) 374, 440, 1093, 1288
AflII CTTAAG 1 cut(s) 1376
AgsI TTSAA 8 cut(s) 52, 255, 276, 361, 1189, 1264, 1318, 1547
AjnI CCWGG 4 cut(s) 373, 702, 1150, 1213
AjuI GAANNNNNNNTTGG 2 cut(s) 1111, 1143
AluBI AGCT 9 cut(s) 57, 142, 162, 320, 589, 1145, 1181, 1367, 1550
AluI AGCT 9 cut(s) 57, 142, 162, 320, 589, 1145, 1181, 1367, 1550
Alw21I GWGCWC 1 cut(s) 497
Alw26I GTCTC 2 cut(s) 345, 1465
AlwI GGATC 4 cut(s) 176, 627, 1286, 1299
AlwNI CAGNNNCTG 1 cut(s) 899
Ama87I CYCGRG 1 cut(s) 306
AoxI GGCC 5 cut(s) 364, 405, 526, 712, 1349
ApeKI GCWGC 6 cut(s) 159, 317, 320, 1196, 1367, 1433
ApoI RAATTY 3 cut(s) 196, 469, 1020
AseI ATTAAT 1 cut(s) 1029
AspLEI GCGC 2 cut(s) 1323, 1523
AspS9I GGNCC 6 cut(s) 20, 365, 475, 982, 1064, 1439
AsuC2I CCSGG 1 cut(s) 1353
AsuHPI GGTGA 1 cut(s) 650
AvaI CYCGRG 1 cut(s) 306
AvaII GGWCC 5 cut(s) 20, 475, 982, 1064, 1439
BaeGI GKGCMC 1 cut(s) 1496
BalI TGGCCA 1 cut(s) 714
BamHI GGATCC 1 cut(s) 1291
BarI GAAGNNNNNNTAC 2 cut(s) 711, 743
BbsI GAAGAC 2 cut(s) 336, 574
Bbv12I GWGCWC 1 cut(s) 497
BbvI GCAGC 6 cut(s) 171, 307, 329, 1183, 1354, 1420
BccI CCATC 2 cut(s) 926, 965
BceAI ACGGC 2 cut(s) 1209, 1364
BciT130I CCWGG 4 cut(s) 375, 704, 1152, 1215
BcnI CCSGG 1 cut(s) 1353
BcoDI GTCTC 2 cut(s) 345, 1465
BfaI CTAG 2 cut(s) 1406, 1421
BfmI CTRYAG 1 cut(s) 1197
BfoI RGCGCY 1 cut(s) 1324
BfrI CTTAAG 1 cut(s) 1376
BfuAI ACCTGC 1 cut(s) 1052
BisI GCNGC 7 cut(s) 160, 318, 321, 520, 1197, 1368, 1434
BlsI GCNGC 7 cut(s) 161, 319, 322, 521, 1198, 1369, 1435
Bme1390I CCNGG 5 cut(s) 375, 704, 1152, 1215, 1353
Bme18I GGWCC 5 cut(s) 20, 475, 982, 1064, 1439
BmeT110I CYCGRG 1 cut(s) 306
BmgT120I GGNCC 6 cut(s) 20, 365, 475, 982, 1064, 1439
BmiI GGNNCC 2 cut(s) 22, 1293
BmrFI CCNGG 5 cut(s) 375, 704, 1152, 1215, 1353
BmsI GCATC 3 cut(s) 885, 905, 1340
BpiI GAAGAC 2 cut(s) 336, 574
BpmI CTGGAG 2 cut(s) 534, 1128
BpuEI CTTGAG 1 cut(s) 1024
BpuMI CCSGG 1 cut(s) 1353
BsaAI YACGTR 1 cut(s) 1538
BsaJI CCNNGG 6 cut(s) 186, 228, 374, 985, 1214, 1324
Bsc4I CCNNNNNNNGG 4 cut(s) 374, 440, 1093, 1288
Bse1I ACTGG 1 cut(s) 1177
Bse3DI GCAATG 1 cut(s) 960
BseBI CCWGG 4 cut(s) 375, 704, 1152, 1215
BseDI CCNNGG 6 cut(s) 186, 228, 374, 985, 1214, 1324
BseGI GGATG 1 cut(s) 1242
BseLI CCNNNNNNNGG 4 cut(s) 374, 440, 1093, 1288
BseMI GCAATG 1 cut(s) 960
BseMII CTCAG 5 cut(s) 186, 810, 843, 1542, 1577
BseNI ACTGG 1 cut(s) 1177
BseSI GKGCMC 1 cut(s) 1496
BseX3I CGGCCG 1 cut(s) 1349
BseXI GCAGC 6 cut(s) 171, 307, 329, 1183, 1354, 1420
BsgI GTGCAG 2 cut(s) 1080, 1518
Bsh1285I CGRYCG 1 cut(s) 1352
BshFI GGCC 5 cut(s) 366, 407, 528, 714, 1351
BsiEI CGRYCG 1 cut(s) 1352
BsiHKAI GWGCWC 1 cut(s) 497
BsiHKCI CYCGRG 1 cut(s) 306
BsiSI CCGG 1 cut(s) 1352
BslI CCNNNNNNNGG 4 cut(s) 374, 440, 1093, 1288
BsmAI GTCTC 2 cut(s) 345, 1465
BsmI GAATGC 1 cut(s) 923
BsnI GGCC 5 cut(s) 366, 407, 528, 714, 1351
BsoBI CYCGRG 1 cut(s) 306
Bsp1286I GDGCHC 2 cut(s) 497, 1496
Bsp1407I TGTACA 1 cut(s) 205
Bsp143I GATC 4 cut(s) 181, 619, 777, 1291
BspACI CCGC 4 cut(s) 41, 519, 664, 1490
BspANI GGCC 5 cut(s) 366, 407, 528, 714, 1351
BspCNI CTCAG 5 cut(s) 185, 809, 842, 1543, 1576
BspLI GGNNCC 2 cut(s) 22, 1293
BspMAI CTGCAG 1 cut(s) 1201
BspMI ACCTGC 1 cut(s) 1052
BspPI GGATC 4 cut(s) 176, 627, 1286, 1299
BspQI GCTCTTC 1 cut(s) 1152
BspTI CTTAAG 1 cut(s) 1376
BsrBI CCGCTC 1 cut(s) 43
BsrDI GCAATG 1 cut(s) 960
BsrGI TGTACA 1 cut(s) 205
BsrI ACTGG 1 cut(s) 1177
BssECI CCNNGG 6 cut(s) 186, 228, 374, 985, 1214, 1324
BssMI GATC 4 cut(s) 181, 619, 777, 1291
BssNAI GTATAC 1 cut(s) 669
BssT1I CCWWGG 4 cut(s) 186, 228, 985, 1324
Bst1107I GTATAC 1 cut(s) 669
Bst2UI CCWGG 4 cut(s) 375, 704, 1152, 1215
Bst4CI ACNGT 8 cut(s) 13, 261, 335, 452, 485, 913, 1314, 1384
Bst6I CTCTTC 2 cut(s) 1152, 1265
BstAFI CTTAAG 1 cut(s) 1376
BstAUI TGTACA 1 cut(s) 205
BstBAI YACGTR 1 cut(s) 1538
BstC8I GCNNGC 2 cut(s) 1165, 1492
BstDEI CTNAG 6 cut(s) 172, 282, 796, 829, 1551, 1563
BstF5I GGATG 1 cut(s) 1242
BstH2I RGCGCY 1 cut(s) 1324
BstHHI GCGC 2 cut(s) 1323, 1523
BstKTI GATC 4 cut(s) 184, 622, 780, 1294
BstMAI GTCTC 2 cut(s) 345, 1465
BstMBI GATC 4 cut(s) 181, 619, 777, 1291
BstMCI CGRYCG 1 cut(s) 1352
BstMWI GCNNNNNNNGC 6 cut(s) 54, 525, 1202, 1421, 1430, 1442
BstNI CCWGG 4 cut(s) 375, 704, 1152, 1215
BstSCI CCNGG 5 cut(s) 373, 702, 1150, 1213, 1351
BstSFI CTRYAG 1 cut(s) 1197
BstSLI GKGCMC 1 cut(s) 1496
BstV1I GCAGC 6 cut(s) 171, 307, 329, 1183, 1354, 1420
BstV2I GAAGAC 2 cut(s) 336, 574
BstX2I RGATCY 2 cut(s) 619, 1291
BstXI CCANNNNNNTGG 1 cut(s) 710
BstYI RGATCY 2 cut(s) 619, 1291
BstZ17I GTATAC 1 cut(s) 669
BstZI CGGCCG 1 cut(s) 1349
BsuRI GGCC 5 cut(s) 366, 407, 528, 714, 1351
BtsCI GGATG 1 cut(s) 1242
BtsI GCAGTG 2 cut(s) 1206, 1530
BtsIMutI CAGTG 3 cut(s) 1170, 1206, 1530
BveI ACCTGC 1 cut(s) 1052
Cac8I GCNNGC 2 cut(s) 1165, 1492
CaiI CAGNNNCTG 1 cut(s) 899
CfoI GCGC 2 cut(s) 1323, 1523
Cfr13I GGNCC 6 cut(s) 20, 365, 475, 982, 1064, 1439
CseI GACGC 1 cut(s) 464
Csp6I GTAC 5 cut(s) 206, 753, 1045, 1346, 1570
CspCI CAANNNNNGTGG 2 cut(s) 943, 978
CviAII CATG 1 cut(s) 388
CviQI GTAC 5 cut(s) 206, 753, 1045, 1346, 1570
DdeI CTNAG 6 cut(s) 172, 282, 796, 829, 1551, 1563
DpnI GATC 4 cut(s) 183, 621, 779, 1293
DpnII GATC 4 cut(s) 181, 619, 777, 1291
DraI TTTAAA 1 cut(s) 1209
EaeI YGGCCR 3 cut(s) 526, 712, 1349
EagI CGGCCG 1 cut(s) 1349
Eam1104I CTCTTC 2 cut(s) 1152, 1265
EarI CTCTTC 2 cut(s) 1152, 1265
EclXI CGGCCG 1 cut(s) 1349
Eco130I CCWWGG 4 cut(s) 186, 228, 985, 1324
Eco32I GATATC 1 cut(s) 401
Eco47I GGWCC 5 cut(s) 20, 475, 982, 1064, 1439
Eco52I CGGCCG 1 cut(s) 1349
Eco57I CTGAAG 3 cut(s) 186, 608, 733
Eco88I CYCGRG 1 cut(s) 306
EcoO109I RGGNCCY 2 cut(s) 20, 1064
EcoRII CCWGG 4 cut(s) 373, 702, 1150, 1213
EcoRV GATATC 1 cut(s) 401
EcoT14I CCWWGG 4 cut(s) 186, 228, 985, 1324
ErhI CCWWGG 4 cut(s) 186, 228, 985, 1324
FaeI CATG 1 cut(s) 391
FatI CATG 1 cut(s) 387
FauI CCCGC 1 cut(s) 1483
FauNDI CATATG 1 cut(s) 736
FblI GTMKAC 1 cut(s) 668
Fnu4HI GCNGC 7 cut(s) 160, 318, 321, 520, 1197, 1368, 1434
FokI GGATG 1 cut(s) 1229
Fsp4HI GCNGC 7 cut(s) 160, 318, 321, 520, 1197, 1368, 1434
FspBI CTAG 2 cut(s) 1406, 1421
FspI TGCGCA 1 cut(s) 1522
GlaI GCGC 2 cut(s) 1322, 1522
GluI GCNGC 7 cut(s) 160, 318, 321, 520, 1197, 1368, 1434
GsuI CTGGAG 2 cut(s) 534, 1128
HaeII RGCGCY 1 cut(s) 1324
HaeIII GGCC 5 cut(s) 366, 407, 528, 714, 1351
HapII CCGG 1 cut(s) 1352
HgaI GACGC 1 cut(s) 464
HhaI GCGC 2 cut(s) 1323, 1523
Hin1II CATG 1 cut(s) 391
Hin6I GCGC 2 cut(s) 1321, 1521
HinP1I GCGC 2 cut(s) 1321, 1521
HindIII AAGCTT 1 cut(s) 140
HinfI GANTC 5 cut(s) 99, 503, 787, 825, 948
HpaII CCGG 1 cut(s) 1352
HphI GGTGA 1 cut(s) 650
Hpy166II GTNNAC 5 cut(s) 448, 545, 669, 1047, 1310
Hpy188I TCNGA 6 cut(s) 17, 166, 202, 627, 832, 1566
Hpy188III TCNNGA 5 cut(s) 414, 513, 1004, 1107, 1295
Hpy8I GTNNAC 5 cut(s) 448, 545, 669, 1047, 1310
HpyAV CCTTC 4 cut(s) 280, 571, 629, 737
HpyCH4III ACNGT 8 cut(s) 13, 261, 335, 452, 485, 913, 1314, 1384
HpyCH4IV ACGT 2 cut(s) 79, 1537
HpyF10VI GCNNNNNNNGC 6 cut(s) 54, 525, 1202, 1421, 1430, 1442
HpyF3I CTNAG 6 cut(s) 172, 282, 796, 829, 1551, 1563
HpySE526I ACGT 2 cut(s) 79, 1537
Hsp92II CATG 1 cut(s) 391
HspAI GCGC 2 cut(s) 1321, 1521
Kzo9I GATC 4 cut(s) 181, 619, 777, 1291
LguI GCTCTTC 1 cut(s) 1152
LmnI GCTCC 2 cut(s) 594, 1186
Lsp1109I GCAGC 6 cut(s) 171, 307, 329, 1183, 1354, 1420
LweI GCATC 3 cut(s) 885, 905, 1340
MaeI CTAG 2 cut(s) 1406, 1421
MaeII ACGT 2 cut(s) 79, 1537
MaeIII GTNAC 2 cut(s) 452, 935
MalI GATC 4 cut(s) 183, 621, 779, 1293
MbiI CCGCTC 1 cut(s) 43
MboI GATC 4 cut(s) 181, 619, 777, 1291
MfeI CAATTG 2 cut(s) 708, 1286
MflI RGATCY 2 cut(s) 619, 1291
MhlI GDGCHC 2 cut(s) 497, 1496
MlsI TGGCCA 1 cut(s) 714
MluNI TGGCCA 1 cut(s) 714
MlyI GAGTC 2 cut(s) 781, 942
MmeI TCCRAC 4 cut(s) 92, 116, 445, 925
Mox20I TGGCCA 1 cut(s) 714
MscI TGGCCA 1 cut(s) 714
MseI TTAA 6 cut(s) 1029, 1092, 1208, 1250, 1377, 1388
Msp20I TGGCCA 1 cut(s) 714
MspA1I CMGCKG 2 cut(s) 320, 1367
MspCI CTTAAG 1 cut(s) 1376
MspI CCGG 1 cut(s) 1352
MspR9I CCNGG 5 cut(s) 375, 704, 1152, 1215, 1353
MunI CAATTG 2 cut(s) 708, 1286
Mva1269I GAATGC 1 cut(s) 923
MvaI CCWGG 4 cut(s) 375, 704, 1152, 1215
MwoI GCNNNNNNNGC 6 cut(s) 54, 525, 1202, 1421, 1430, 1442
NciI CCSGG 1 cut(s) 1353
NdeI CATATG 1 cut(s) 736
NdeII GATC 4 cut(s) 181, 619, 777, 1291
NlaIII CATG 1 cut(s) 391
NlaIV GGNNCC 2 cut(s) 22, 1293
NmuCI GTSAC 1 cut(s) 452
NsbI TGCGCA 1 cut(s) 1522
PaeR7I CTCGAG 1 cut(s) 306
PciSI GCTCTTC 1 cut(s) 1152
PctI GAATGC 1 cut(s) 923
PfeI GAWTC 3 cut(s) 99, 503, 825
PkrI GCNGC 7 cut(s) 161, 319, 322, 521, 1198, 1369, 1435
PleI GAGTC 2 cut(s) 781, 942
PpsI GAGTC 2 cut(s) 781, 942
Ppu21I YACGTR 1 cut(s) 1538
PpuMI RGGWCCY 2 cut(s) 20, 1064
PshBI ATTAAT 1 cut(s) 1029
PsiI TTATAA 1 cut(s) 1590
Psp1406I AACGTT 1 cut(s) 79
Psp5II RGGWCCY 2 cut(s) 20, 1064
Psp6I CCWGG 4 cut(s) 373, 702, 1150, 1213
PspGI CCWGG 4 cut(s) 373, 702, 1150, 1213
PspN4I GGNNCC 2 cut(s) 22, 1293
PspPI GGNCC 6 cut(s) 20, 365, 475, 982, 1064, 1439
PspPPI RGGWCCY 2 cut(s) 20, 1064
PspXI VCTCGAGB 1 cut(s) 306
PstI CTGCAG 1 cut(s) 1201
PstNI CAGNNNCTG 1 cut(s) 899
PsuI RGATCY 2 cut(s) 619, 1291
PvuII CAGCTG 2 cut(s) 320, 1367
RsaI GTAC 5 cut(s) 207, 754, 1046, 1347, 1571
RsaNI GTAC 5 cut(s) 206, 753, 1045, 1346, 1570
SapI GCTCTTC 1 cut(s) 1152
SaqAI TTAA 6 cut(s) 1029, 1092, 1208, 1250, 1377, 1388
SatI GCNGC 7 cut(s) 160, 318, 321, 520, 1197, 1368, 1434
Sau3AI GATC 4 cut(s) 181, 619, 777, 1291
Sau96I GGNCC 6 cut(s) 20, 365, 475, 982, 1064, 1439
SchI GAGTC 2 cut(s) 781, 942
ScrFI CCNGG 5 cut(s) 375, 704, 1152, 1215, 1353
SduI GDGCHC 2 cut(s) 497, 1496
SfaNI GCATC 3 cut(s) 885, 905, 1340
SfcI CTRYAG 1 cut(s) 1197
Sfr274I CTCGAG 1 cut(s) 306
SinI GGWCC 5 cut(s) 20, 475, 982, 1064, 1439
SlaI CTCGAG 1 cut(s) 306
SmlI CTYRAG 3 cut(s) 306, 1039, 1376
SmoI CTYRAG 3 cut(s) 306, 1039, 1376
SsiI CCGC 4 cut(s) 41, 519, 664, 1490
SspI AATATT 1 cut(s) 1125
SspMI CTAG 2 cut(s) 1406, 1421
StyD4I CCNGG 5 cut(s) 373, 702, 1150, 1213, 1351
StyI CCWWGG 4 cut(s) 186, 228, 985, 1324
TaaI ACNGT 8 cut(s) 13, 261, 335, 452, 485, 913, 1314, 1384
TaiI ACGT 2 cut(s) 82, 1540
TaqI TCGA 4 cut(s) 307, 415, 1393, 1452
TatI WGTACW 2 cut(s) 205, 1569
TauI GCSGC 1 cut(s) 522
TfiI GAWTC 3 cut(s) 99, 503, 825
Tru1I TTAA 6 cut(s) 1029, 1092, 1208, 1250, 1377, 1388
Tru9I TTAA 6 cut(s) 1029, 1092, 1208, 1250, 1377, 1388
TscAI CASTG 3 cut(s) 1177, 1206, 1537
TseFI GTSAC 1 cut(s) 452
TseI GCWGC 6 cut(s) 159, 317, 320, 1196, 1367, 1433
Tsp45I GTSAC 1 cut(s) 452
TspDTI ATGAA 3 cut(s) 495, 553, 1212
TspGWI ACGGA 1 cut(s) 770
TspRI CASTG 3 cut(s) 1177, 1206, 1537
Vha464I CTTAAG 1 cut(s) 1376
VpaK11BI GGWCC 5 cut(s) 20, 475, 982, 1064, 1439
VspI ATTAAT 1 cut(s) 1029
XapI RAATTY 3 cut(s) 196, 469, 1020
XhoI CTCGAG 1 cut(s) 306
XmiI GTMKAC 1 cut(s) 668
XspI CTAG 2 cut(s) 1406, 1421
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.