Rh6CG079500

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0000047
Physical Location & Seq
Reverse (-)
8540308 .. 8543496
3189 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG079500.1

Sequence Viewer

Length: 3189 bp
ATGAAAACTTGGCTACGTTTCTTCCTTTCCTTAGTCACACTCTGTGTTAGTAGCATCATCATCCCACTAGTTCATAGCAAGTGTAATCCAGAACAGCAACTATCATTGCTTCATTTCAAGAGCAGCCTTTTATTCAAATCCTCTCTTTCTTCCAAGCTTATTACCTGGAATTCAAGTACCGATTGCTGTTCTTGGGTCGGCGTTACTTGCAGCACCAATGGCAGTGTTCTGGGTCTTGACATCAGCAGCGAATCAATCTCAGGTGGGATTGACAATTCCAGCAGTCTCTTCCATCTTCAGCATCTACAAAGCCTCAATTTGGCGGACAACGAACTTGGCAACGGCTCATCAATTCCATCTGCAGTCGGGCAGCTCATGAATTTGAGGTATCTAAATTTATCTGAAAATGCTTATTCAGGGAAAATTCCAATTGAGATTTCACGTTTGACGAGGTTGGTAGTTCTTGATATTTCTGGAAGATTTTTTTTGGACGCTCAGTTAAAACTTGAGATCCCAAATTTACACATGCTGGTAGAGAACCTCACACAGCTTACAAAGTTATATCTTGATGATGTCCAAATATCAGCACAGGGAAGTGAGTGGTGCCAAGCCATATCATCTTCCCTTCCCAACCTCAGGGTGTTGAGCTTGTCCCATTGTAATCTTTCAGGCCTTTTTCACGAATCCCTTGCTAAGCTTCAGTCTTTATTAGTGATTCAATTGAGTTTCAACAATATCTCTGCGCCAGTTCCAAGATTCTTTGCCAACTTTTCAAACTTGACATCCTTGATTCTCAAAGATTGTAATTTGCAGGGAACATTTCCTAAAGAGGTCTTTCAGCTATCTTCTCTTCAAAGTATTGATCTTTCGCATAATGAAGGACTTCATGGTTCCTTGCCGGAATTTCCAAACAATGGATCTCTTCAGAACTTGCATTTAAGTGTGACAAGTTTTTCAGGATCATTACCAGACTCTATTGGCAACCTCAAAATGTTGTCAACCATATACATCCATGACAACAATTTTACTGGATCAATCCCCATTTCAATGACAAACCTTACGCATTTGCGTTATTTGGAGATGTATGTAAACAACTTTGAAGGTTCAATTCCGTCATTCAGTGGGGCCAAGAATCTAGAAGGAATAGATCTCATTTCAAATGGTCTAACAGGTAATATTAATTGCACCTACTGGGGAAACCTTACTAAACTCAGCTATATTGCCTTGGGAGACAATATGCTCAATGGGAATATTCCATCGTCTTTGCTTTCTCTTCCGTTGCTGAGAAATCTAGATCTTTCCTGGAACCAGTTCTTTGGTCAATTTCCTGAAACTTCTAATCTTTCATCCTACTTCATCAAAGATCTTGATTTGAGTATAAACAATCTGGAAGGGCCAATACCTATGTCTATCTTTAATTTACAAGGTCTTAGAACTCTTGATCTTTCTTCAAACAATTTCAGTGGCTCATTTTCTCTGGATAGTCTTCAACATCTGAGAAATCTTTATTTTCTTGATCTTTCACACAATAGCTTGTTTCTTAGCCATGGTGCTACCAATTACTCATATTCTTCCTTTCCTCAATTTCAAGACTTGAGGTTGGCTTCGGGAAAGTTGAGAACATTCCCTGATTTCTTGAGAAATCAATTCAAATTAGAGGTTTTGTATCTTTCAGATAACCAGATACAGGGCAAGATACCCAATTGGATTTGGAGGTTCAATAATCTGTTTGACCTAAACCTTTCATGCAACTCTCTAGAAACTCTAGAAGGTCCTACAATCAATCTCACTTCTATGGCATTCCTTGACCTTCATTCTAACCAGCTTCATGGGAAAATCCCAATTTCATCATCACCTAACATGTATTATCTAGATTACTCTAGGAATAACTTCAGCTCTACCATACCGACTTCCATTGCTGATCTGTTGCCTAACACTCGATTCTTCTCTATTTCAAGCAATAACCTTCAGGGGATCATTCCAGGATCAATATGCAATTCACATAACCTTGAGGTTCTTGATCTGTCCAATAATTCCTTGAGTGGCACGGTTCCTCACTGCTTGACTACATTGAGCACTCTTTCAGTACTTAATTTAAGAAGAAACAATCTTACAAATGTAGACAGGTTGTCTCACAATTGCAGTTTGCGAACTCTAGACATCAGTGAAAATCATATACAAGGTCAGCTTCCAAAATCACTCGTAAACTGCCCTCAATTAGAGGTTTTGAACCTTGGAAAGAATCAAATAACAGGTCCATTTCCATGCTTTTTGAAGAACACATCTACCCTGCGTGTCCTTGTCTTGCGATCCAATAAACTCTATGGAGGCATTGGATGTCCCAAGATTAAAGGCACTTGGCCGATGCTTCAAATTATAGACCTAGCTCACAACAATTTTAGTGGAAATGTACCAGGGAGAGATTTGACAACTTGGCAGGGAATGATGACTAATGAAGATGTTGCCTCATCAGAGCTCAATCACCTTCAATTTCAGGACAATGGAACTGGTGGGATTTATTATCAGGATACAATTACAGTTACCAACAAAGGTATAGAGATGGAGCTGGTAAAGATTTTAACAGTCTTCACCTCGATTGACTTCTCATGCAACAAGTTTACCGGATCAATACCTGAGGAAATTGGAGAACTCAAATCACTACTAGTCCTCAACTTGTCAAATAATGCTTTCACAGGTGCAATTCCACCATCAATGAGTAACTTGAGTGAGCTAGAGTCTTTAGACCTCTCACAAAACACCCTGAGCGGTCAAATTCCACCACAGCTTACAAAACTCACTTTCCTTTCATTCTTGAATCTCTCATACAATCAAATGGTCGGCAGGATTCCAAGCAGCAATCAATTTTCAACATTTCCAAAATCTTCCTTTGAAGGTAACAAAGATTTATTCGGACCTCCTTTGACTGAAGATAACACAACACGGTTTTCACCACCAGCATCGATAAAAAGCCATAAAGATGAGATTGATTGGAATCTGATTACAGTTGAGGTTGGATTCACATGTGGGTTCGGAATTGCCATTGGCTCAATTTTGTTTTGCAAGAAATGGAGGAAATGGTATTACAGAGCTATGTATAATATCCTTCTAAAGATATTTCCACAGCTGGAAGAAAGATTTGGTGATCACAGAAGACATGTTTGCATAAGTCAAAGGTACTGGAGGCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1062

Amino Acids

118.4

Weight (kDa)

6.36

Isoelectric Point (pI)

34.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 30 - 71 6.1e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 88 - 191 1.8e-07 Leucine-rich repeat region
LRR_8 PF13855 210 - 270 9.4e-08 Leucine rich repeat
LRR_14 PF23598 370 - 608 1.8e-07 Leucine-rich repeat region
LRR_8 PF13855 454 - 512 1.1e-06 Leucine rich repeat
LRR_8 PF13855 551 - 609 6.2e-06 Leucine rich repeat
LRR_8 PF13855 649 - 704 1.1e-07 Leucine rich repeat
LRR_8 PF13855 669 - 726 1.3e-07 Leucine rich repeat
LRR_8 PF13855 715 - 774 3.3e-06 Leucine rich repeat
LRR_8 PF13855 865 - 921 3.4e-06 Leucine rich repeat
LRR_14 PF23598 875 - 940 6.1e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 603
AccB7I CCANNNNNTGG 1 cut(s) 914
AccBSI CCGCTC 1 cut(s) 2766
AccI GTMKAC 1 cut(s) 2121
AciI CCGC 2 cut(s) 323, 2766
AclWI GGATC 8 cut(s) 505, 925, 967, 1039, 1982, 1993, 2304, 2632
AcoI YGGCCR 1 cut(s) 2360
AcsI RAATTY 7 cut(s) 169, 379, 394, 423, 517, 902, 2772
AcuI CTGAAG 6 cut(s) 281, 683, 908, 1876, 1952, 2946
AdeI CACNNNGTG 1 cut(s) 44
AfaI GTAC 4 cut(s) 178, 2088, 2412, 3176
AfiI CCNNNNNNNGG 4 cut(s) 319, 636, 914, 1687
AflIII ACRYGT 3 cut(s) 1860, 3020, 3154
AhdI GACNNNNNGTC 1 cut(s) 2128
AhlI ACTAGT 2 cut(s) 67, 2662
AjnI CCWGG 4 cut(s) 164, 1301, 1981, 2413
AjuI GAANNNNNNNTTGG 4 cut(s) 421, 453, 3120, 3152
Alw21I GWGCWC 2 cut(s) 2078, 2478
Alw26I GTCTC 3 cut(s) 290, 1224, 2136
AlwI GGATC 8 cut(s) 505, 925, 967, 1039, 1982, 1993, 2304, 2632
AoxI GGCC 4 cut(s) 670, 1125, 1394, 2360
ApeKI GCWGC 5 cut(s) 123, 210, 246, 370, 2853
ApoI RAATTY 7 cut(s) 169, 379, 394, 423, 517, 902, 2772
ArsI GACNNNNNNTTYG 2 cut(s) 2239, 2271
AseI ATTAAT 1 cut(s) 1179
Asp700I GAANNNNTTC 3 cut(s) 882, 1310, 1889
AspLEI GCGC 1 cut(s) 745
AspS9I GGNCC 5 cut(s) 1125, 1394, 1772, 2255, 2912
AsuHPI GGTGA 5 cut(s) 1845, 2474, 2581, 2940, 3152
AvaII GGWCC 3 cut(s) 1772, 2255, 2912
AxyI CCTNAGG 2 cut(s) 635, 2634
BanI GGYRCC 1 cut(s) 603
BanII GRGCYC 1 cut(s) 2478
BarI GAAGNNNNNNTAC 2 cut(s) 1383, 1415
BbsI GAAGAC 3 cut(s) 1478, 2578, 3157
Bbv12I GWGCWC 2 cut(s) 2078, 2478
BbvI GCAGC 5 cut(s) 135, 222, 258, 382, 2865
BccI CCATC 5 cut(s) 300, 364, 1264, 2554, 2716
BceAI ACGGC 1 cut(s) 358
BcgI CGANNNNNNTGC 2 cut(s) 671, 705
BciT130I CCWGG 4 cut(s) 166, 1303, 1983, 2415
BciVI GTATCC 1 cut(s) 2521
BclI TGATCA 1 cut(s) 3142
BcoDI GTCTC 3 cut(s) 290, 1224, 2136
BcuI ACTAGT 2 cut(s) 67, 2662
BfmI CTRYAG 1 cut(s) 360
BfuI GTATCC 1 cut(s) 2521
BglII AGATCT 3 cut(s) 1147, 1294, 1363
BisI GCNGC 5 cut(s) 124, 211, 247, 371, 2854
BlpI GCTNAGC 1 cut(s) 693
BlsI GCNGC 5 cut(s) 125, 212, 248, 372, 2855
BmcAI AGTACT 1 cut(s) 2088
Bme1390I CCNGG 4 cut(s) 166, 1303, 1983, 2415
Bme18I GGWCC 3 cut(s) 1772, 2255, 2912
BmeRI GACNNNNNGTC 1 cut(s) 2128
BmgT120I GGNCC 5 cut(s) 1125, 1394, 1772, 2255, 2912
BmiI GGNNCC 5 cut(s) 605, 892, 1126, 1307, 2052
BmrFI CCNGG 4 cut(s) 166, 1303, 1983, 2415
BmrI ACTGGG 1 cut(s) 1201
BmsI GCATC 4 cut(s) 63, 310, 2355, 2966
BmuI ACTGGG 1 cut(s) 1201
BpiI GAAGAC 3 cut(s) 1478, 2578, 3157
Bpu10I CCTNAGC 1 cut(s) 2762
Bpu1102I GCTNAGC 1 cut(s) 693
BpuEI CTTGAG 6 cut(s) 527, 1615, 1657, 2030, 2059, 2743
Bsa29I ATCGAT 1 cut(s) 2960
BsaBI GATNNNNATC 1 cut(s) 2991
BsaJI CCNNGG 4 cut(s) 1224, 1546, 2233, 2414
BsaWI WCCGGW 1 cut(s) 2621
Bsc4I CCNNNNNNNGG 4 cut(s) 319, 636, 914, 1687
Bse1I ACTGG 6 cut(s) 746, 1033, 1196, 1309, 2512, 3182
Bse21I CCTNAGG 2 cut(s) 635, 2634
Bse3DI GCAATG 2 cut(s) 104, 1914
Bse8I GATNNNNATC 1 cut(s) 2991
BseBI CCWGG 4 cut(s) 166, 1303, 1983, 2415
BseCI ATCGAT 1 cut(s) 2960
BseDI CCNNGG 4 cut(s) 1224, 1546, 2233, 2414
BseGI GGATG 5 cut(s) 60, 782, 1008, 1346, 2342
BseJI GATNNNNATC 1 cut(s) 2991
BseLI CCNNNNNNNGG 4 cut(s) 319, 636, 914, 1687
BseMI GCAATG 2 cut(s) 104, 1914
BseMII CTCAG 8 cut(s) 273, 509, 649, 1225, 1274, 1487, 2625, 2753
BseNI ACTGG 6 cut(s) 746, 1033, 1196, 1309, 2512, 3182
BseXI GCAGC 5 cut(s) 135, 222, 258, 382, 2865
BshFI GGCC 4 cut(s) 672, 1127, 1396, 2362
BshNI GGYRCC 1 cut(s) 603
BshVI ATCGAT 1 cut(s) 2960
BsiHKAI GWGCWC 2 cut(s) 2078, 2478
BsiSI CCGG 2 cut(s) 899, 2622
BslFI GGGAC 2 cut(s) 637, 2325
BslI CCNNNNNNNGG 4 cut(s) 319, 636, 914, 1687
BsmAI GTCTC 3 cut(s) 290, 1224, 2136
BsmFI GGGAC 2 cut(s) 637, 2325
BsmI GAATGC 1 cut(s) 1799
BsnI GGCC 4 cut(s) 672, 1127, 1396, 2362
Bsp1286I GDGCHC 2 cut(s) 2078, 2478
Bsp1720I GCTNAGC 1 cut(s) 693
Bsp19I CCATGG 1 cut(s) 1546
BspACI CCGC 2 cut(s) 323, 2766
BspANI GGCC 4 cut(s) 672, 1127, 1396, 2362
BspCNI CTCAG 8 cut(s) 272, 508, 648, 1224, 1275, 1488, 2626, 2754
BspDI ATCGAT 1 cut(s) 2960
BspHI TCATGA 1 cut(s) 375
BspLI GGNNCC 5 cut(s) 605, 892, 1126, 1307, 2052
BspMAI CTGCAG 1 cut(s) 364
BspPI GGATC 8 cut(s) 505, 925, 967, 1039, 1982, 1993, 2304, 2632
BspT107I GGYRCC 1 cut(s) 603
BsrBI CCGCTC 1 cut(s) 2766
BsrDI GCAATG 2 cut(s) 104, 1914
BsrI ACTGG 6 cut(s) 746, 1033, 1196, 1309, 2512, 3182
BssECI CCNNGG 4 cut(s) 1224, 1546, 2233, 2414
BssT1I CCWWGG 3 cut(s) 1224, 1546, 2233
Bst2UI CCWGG 4 cut(s) 166, 1303, 1983, 2415
Bst4CI ACNGT 5 cut(s) 2050, 2539, 2584, 2943, 3004
Bst6I CTCTTC 4 cut(s) 293, 855, 927, 1278
BstDSI CCRYGG 1 cut(s) 1546
BstF5I GGATG 5 cut(s) 60, 782, 1008, 1346, 2342
BstHHI GCGC 1 cut(s) 745
BstMAI GTCTC 3 cut(s) 290, 1224, 2136
BstMWI GCNNNNNNNGC 2 cut(s) 207, 219
BstNI CCWGG 4 cut(s) 166, 1303, 1983, 2415
BstNSI RCATGY 4 cut(s) 529, 1864, 3024, 3158
BstSCI CCNGG 4 cut(s) 164, 1301, 1981, 2413
BstSFI CTRYAG 1 cut(s) 360
BstV1I GCAGC 5 cut(s) 135, 222, 258, 382, 2865
BstV2I GAAGAC 3 cut(s) 1478, 2578, 3157
BstX2I RGATCY 5 cut(s) 510, 917, 1147, 1294, 1363
BstXI CCANNNNNNTGG 2 cut(s) 1316, 1829
BstYI RGATCY 5 cut(s) 510, 917, 1147, 1294, 1363
Bsu15I ATCGAT 1 cut(s) 2960
Bsu36I CCTNAGG 2 cut(s) 635, 2634
BsuI GTATCC 1 cut(s) 2521
BsuRI GGCC 4 cut(s) 672, 1127, 1396, 2362
BsuTUI ATCGAT 1 cut(s) 2960
BtgI CCRYGG 1 cut(s) 1546
BtsCI GGATG 5 cut(s) 60, 782, 1008, 1346, 2342
BtsI GCAGTG 2 cut(s) 229, 2056
BtsIMutI CAGTG 5 cut(s) 229, 1126, 1468, 2056, 2170
CciI TCATGA 1 cut(s) 375
CfoI GCGC 1 cut(s) 745
Cfr13I GGNCC 5 cut(s) 1125, 1394, 1772, 2255, 2912
ClaI ATCGAT 1 cut(s) 2960
CseI GACGC 1 cut(s) 500
Csp6I GTAC 4 cut(s) 177, 2087, 2411, 3175
CspCI CAANNNNNGTGG 4 cut(s) 1444, 1479, 2383, 2418
CviQI GTAC 4 cut(s) 177, 2087, 2411, 3175
DraIII CACNNNGTG 1 cut(s) 44
DriI GACNNNNNGTC 1 cut(s) 2128
EaeI YGGCCR 1 cut(s) 2360
Eam1104I CTCTTC 4 cut(s) 293, 855, 927, 1278
Eam1105I GACNNNNNGTC 1 cut(s) 2128
EarI CTCTTC 4 cut(s) 293, 855, 927, 1278
EciI GGCGGA 1 cut(s) 338
Ecl136II GAGCTC 1 cut(s) 2476
Eco130I CCWWGG 3 cut(s) 1224, 1546, 2233
Eco147I AGGCCT 1 cut(s) 672
Eco24I GRGCYC 1 cut(s) 2478
Eco47I GGWCC 3 cut(s) 1772, 2255, 2912
Eco53kI GAGCTC 1 cut(s) 2476
Eco57I CTGAAG 6 cut(s) 281, 683, 908, 1876, 1952, 2946
Eco81I CCTNAGG 2 cut(s) 635, 2634
EcoICRI GAGCTC 1 cut(s) 2476
EcoO109I RGGNCCY 1 cut(s) 1772
EcoRI GAATTC 1 cut(s) 169
EcoRII CCWGG 4 cut(s) 164, 1301, 1981, 2413
EcoT14I CCWWGG 3 cut(s) 1224, 1546, 2233
EcoT38I GRGCYC 1 cut(s) 2478
ErhI CCWWGG 3 cut(s) 1224, 1546, 2233
FalI AAGNNNNNCTT 2 cut(s) 2172, 2204
FaqI GGGAC 2 cut(s) 637, 2325
FbaI TGATCA 1 cut(s) 3142
FblI GTMKAC 1 cut(s) 2121
Fnu4HI GCNGC 5 cut(s) 124, 211, 247, 371, 2854
FokI GGATG 5 cut(s) 47, 769, 995, 1333, 2349
FriOI GRGCYC 1 cut(s) 2478
Fsp4HI GCNGC 5 cut(s) 124, 211, 247, 371, 2854
GlaI GCGC 1 cut(s) 744
GluI GCNGC 5 cut(s) 124, 211, 247, 371, 2854
HaeIII GGCC 4 cut(s) 672, 1127, 1396, 2362
HapII CCGG 2 cut(s) 899, 2622
HgaI GACGC 1 cut(s) 500
HhaI GCGC 1 cut(s) 745
Hin6I GCGC 1 cut(s) 743
HinP1I GCGC 1 cut(s) 743
HincII GTYRAC 1 cut(s) 999
HindII GTYRAC 1 cut(s) 999
HindIII AAGCTT 2 cut(s) 155, 695
HpaII CCGG 2 cut(s) 899, 2622
HphI GGTGA 5 cut(s) 1845, 2474, 2581, 2940, 3152
Hpy166II GTNNAC 5 cut(s) 999, 1090, 2122, 2206, 2619
Hpy188I TCNGA 8 cut(s) 403, 927, 1497, 1675, 2473, 2912, 2997, 3032
Hpy8I GTNNAC 5 cut(s) 999, 1090, 2122, 2206, 2619
HpyCH4III ACNGT 5 cut(s) 2050, 2539, 2584, 2943, 3004
HpyCH4IV ACGT 2 cut(s) 16, 442
HpyF10VI GCNNNNNNNGC 2 cut(s) 207, 219
HpySE526I ACGT 2 cut(s) 16, 442
HspAI GCGC 1 cut(s) 743
Ksp22I TGATCA 1 cut(s) 3142
LmnI GCTCC 1 cut(s) 2563
Lsp1109I GCAGC 5 cut(s) 135, 222, 258, 382, 2865
LweI GCATC 4 cut(s) 63, 310, 2355, 2966
MaeII ACGT 2 cut(s) 16, 442
MaeIII GTNAC 6 cut(s) 34, 202, 943, 2539, 2717, 2894
MbiI CCGCTC 1 cut(s) 2766
MfeI CAATTG 4 cut(s) 429, 719, 1702, 2137
MflI RGATCY 5 cut(s) 510, 917, 1147, 1294, 1363
MhlI GDGCHC 2 cut(s) 2078, 2478
MlyI GAGTC 2 cut(s) 965, 2744
MmeI TCCRAC 1 cut(s) 2992
MroXI GAANNNNTTC 3 cut(s) 882, 1310, 1889
MseI TTAA 8 cut(s) 500, 938, 1179, 1416, 2091, 2096, 2349, 2579
MslI CAYNNNNRTG 5 cut(s) 939, 1046, 1793, 2263, 2976
MspA1I CMGCKG 1 cut(s) 3124
MspI CCGG 2 cut(s) 899, 2622
MspR9I CCNGG 4 cut(s) 166, 1303, 1983, 2415
MunI CAATTG 4 cut(s) 429, 719, 1702, 2137
Mva1269I GAATGC 1 cut(s) 1799
MvaI CCWGG 4 cut(s) 166, 1303, 1983, 2415
MwoI GCNNNNNNNGC 2 cut(s) 207, 219
NcoI CCATGG 1 cut(s) 1546
NlaIV GGNNCC 5 cut(s) 605, 892, 1126, 1307, 2052
NmuCI GTSAC 2 cut(s) 34, 943
NspI RCATGY 4 cut(s) 529, 1864, 3024, 3158
PagI TCATGA 1 cut(s) 375
PceI AGGCCT 1 cut(s) 672
PciI ACATGT 3 cut(s) 1860, 3020, 3154
PctI GAATGC 1 cut(s) 1799
PdmI GAANNNNTTC 3 cut(s) 882, 1310, 1889
PflMI CCANNNNNTGG 1 cut(s) 914
PfoI TCCNGGA 2 cut(s) 1301, 1981
PkrI GCNGC 5 cut(s) 125, 212, 248, 372, 2855
PleI GAGTC 2 cut(s) 965, 2743
PpsI GAGTC 2 cut(s) 965, 2743
PpuMI RGGWCCY 1 cut(s) 1772
PscI ACATGT 3 cut(s) 1860, 3020, 3154
PshBI ATTAAT 1 cut(s) 1179
Psp124BI GAGCTC 1 cut(s) 2478
Psp5II RGGWCCY 1 cut(s) 1772
Psp6I CCWGG 4 cut(s) 164, 1301, 1981, 2413
PspGI CCWGG 4 cut(s) 164, 1301, 1981, 2413
PspN4I GGNNCC 5 cut(s) 605, 892, 1126, 1307, 2052
PspPI GGNCC 5 cut(s) 1125, 1394, 1772, 2255, 2912
PspPPI RGGWCCY 1 cut(s) 1772
PstI CTGCAG 1 cut(s) 364
PsuI RGATCY 5 cut(s) 510, 917, 1147, 1294, 1363
PvuII CAGCTG 1 cut(s) 3124
RsaI GTAC 4 cut(s) 178, 2088, 2412, 3176
RsaNI GTAC 4 cut(s) 177, 2087, 2411, 3175
RseI CAYNNNNRTG 5 cut(s) 939, 1046, 1793, 2263, 2976
SacI GAGCTC 1 cut(s) 2478
SaqAI TTAA 8 cut(s) 500, 938, 1179, 1416, 2091, 2096, 2349, 2579
SatI GCNGC 5 cut(s) 124, 211, 247, 371, 2854
Sau96I GGNCC 5 cut(s) 1125, 1394, 1772, 2255, 2912
ScaI AGTACT 1 cut(s) 2088
SchI GAGTC 2 cut(s) 965, 2744
ScrFI CCNGG 4 cut(s) 166, 1303, 1983, 2415
SduI GDGCHC 2 cut(s) 2078, 2478
SfaNI GCATC 4 cut(s) 63, 310, 2355, 2966
SfcI CTRYAG 1 cut(s) 360
SinI GGWCC 3 cut(s) 1772, 2255, 2912
SmiMI CAYNNNNRTG 5 cut(s) 939, 1046, 1793, 2263, 2976
SmlI CTYRAG 6 cut(s) 506, 1594, 1636, 2009, 2038, 2722
SmoI CTYRAG 6 cut(s) 506, 1594, 1636, 2009, 2038, 2722
SpeI ACTAGT 2 cut(s) 67, 2662
SseBI AGGCCT 1 cut(s) 672
SsiI CCGC 2 cut(s) 323, 2766
SspI AATATT 2 cut(s) 1177, 1252
SstI GAGCTC 1 cut(s) 2478
StuI AGGCCT 1 cut(s) 672
StyD4I CCNGG 4 cut(s) 164, 1301, 1981, 2413
StyI CCWWGG 3 cut(s) 1224, 1546, 2233
TaaI ACNGT 5 cut(s) 2050, 2539, 2584, 2943, 3004
TaiI ACGT 2 cut(s) 19, 445
TaqI TCGA 3 cut(s) 1939, 2594, 2960
TatI WGTACW 1 cut(s) 2086
Tru1I TTAA 8 cut(s) 500, 938, 1179, 1416, 2091, 2096, 2349, 2579
Tru9I TTAA 8 cut(s) 500, 938, 1179, 1416, 2091, 2096, 2349, 2579
TscAI CASTG 5 cut(s) 229, 1126, 1468, 2063, 2170
TseFI GTSAC 2 cut(s) 34, 943
TseI GCWGC 5 cut(s) 123, 210, 246, 370, 2853
Tsp45I GTSAC 2 cut(s) 34, 943
TspGWI ACGGA 2 cut(s) 1101, 1266
TspRI CASTG 5 cut(s) 229, 1126, 1468, 2063, 2170
Van91I CCANNNNNTGG 1 cut(s) 914
VpaK11BI GGWCC 3 cut(s) 1772, 2255, 2912
VspI ATTAAT 1 cut(s) 1179
XapI RAATTY 7 cut(s) 169, 379, 394, 423, 517, 902, 2772
XbaI TCTAGA 6 cut(s) 1135, 1291, 1756, 1765, 1870, 2155
XceI RCATGY 4 cut(s) 529, 1864, 3024, 3158
XmiI GTMKAC 1 cut(s) 2121
XmnI GAANNNNTTC 3 cut(s) 882, 1310, 1889
ZrmI AGTACT 1 cut(s) 2088
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.