Rroxscaffold_4G00302010

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000047
Physical Location & Seq
Forward (+)
22372872 .. 22376090
3219 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00302010.1

Sequence Viewer

Length: 3219 bp
ATGAAAACTTTGCTACATTTCTTCCTTTTCTTGATCACATTCTGGGTCAGTATCATCATCCCAGCAGTTCACTGCCAGTGTCTCAAAGACCAGCAACTATCATTGCTCCAATTCAAGAAAAGCCTCGTGTTCGATGCTGATATTAGTCCTTCCACCAAGATTATTTCGTGGAATGCAAGTACTGATTGTTGTTCTTGGGTGGGCGTCACTTGCAGCCGTAATGGGCGTGTTCTGGGTCTTGACATAAGCAGCGAACAGATCTCAGATGGAATTGACAATTCCAGCAGTCTCTTCCATCTTCATTATCTTCAAAGCCTCAATCTGGCTGACAACGGACTTGGTGGCGGTAACTACAATCAATCAATTCCATCCGCCATCGGAAATCTCCTGAACTTGAGGTATCTGAATTTATCTCATACTTATTATTCAGGGCAAATTCCCATCGACATTTCTCGCTTGAAGAGGTTGGAAGTACTTGATTTTTCTAACAATTATTACCTCAAAGTTGGAAGTCCAAATTTACACATGTTGGTTCACAACTTCACAGAGCTTACAGAACTATATCTTGATGATGTCCAAATATCAGAACAGGGGAGTGAGTGGTGCCGAGCCGTATCATCTTCCCTTCCCAACCTCAGGGTCTTGAACATGTCCGGGTGTGGTCTCTCAGGCCCTATTCTCGAGTCCCTTGCCAAGCTTCAGTACCTATCTGTAATTAGTTTGGAATTGAACAATATCTCTGGGCCAGTTCCAGGATTCTTTGCCAAGTTTTCAAACTTGACTGTCTTGGGTCTCAGAAATTGCGGGTTGCATGGAACATTTCCCAAAGAGATCTTTCAGTTACCTTCTCTACAATCTATTGACCTGTCATTTAATCCCCAACTTGATGGTTCCTTGCCAGAATTCCCAAGGAATGGAGCTCTTCAGTACCTGGATCTAAGATTGACAAATTTTTCTGGGTTATTGCCAAATTCTATTGGCGATCTCAAAATGCTGTCCACCATACATATTCAAGACTGCAATTTCACCGGACCGATCCCCAAGTCTATGACAAACCTTACACAATTGGTTTCTTTGTGGATGTCTGGTAACAATTTGGAAGGTTCAATTCCGTCATTCAGTAGGGCCAAAAATGTTGTCGACATAGACCTTTCCAACAATGGTCTAACAGGTACTATTAATTCCACCCACTGGAGAAACTTGACGAAGCTATCTTCTCTCATTTTGGAATCCAATAAGCTCGATGGGAATATCCCAGCATCTCTGTTTTCTCTTCCCTTGTTGGATCGTCTAGTTCTTTCCAGCAATCAACTCGCTGGTACGTTCCCTGAAATCTCAAATTTCTCTCAAGAAGGGCTGATACCTACGTCAATCTCTAGTTTGCGAGGGCTTTATTTGCATAGCAACAATCTCGAAGGGCCAATACCTATGTCTATCTTTAGCTTGCAAGGTCTTACCACTCTAGATCTTTCTTCAAATAATTTAAGTGGCTCGTTTCCTCTTGATGGTCTACGCCAGCTGAGAAATCTTTCTAAACTTGATCTTTCACACAATAACTTGTTTCTTACCCATGATTATACCAATTTCTCATATTCCTCATTTGCTCAAATCTTTGACTTGAGGTTGGTGTCATTGAAATTGAGAACATTTCCTAATTTCTTGAGAAATCAATCTAAATTGGCAACTTTGGACCTTTCAGATAACCAGATAAGTGGCAAGATACCCAACTGGATTGGGAGTTTTAGTAATCTCTATCTCCTAAATCTTTCTTGCAACTCCCTAGATTCTCTCGAAGTTCCTTCAATCAATCTCACTTATTTAGAGTTCCTTGACCTCCATTCCAACCAGTTTCATGGGCAAATCCCAATTTTTACATCTCCTTGCAATGTCTATTATCTAGATTTCTCGAGGAATTATTTCAGCTCTCCCATACCGAGTACCATTGGAGATGTGCTTGTTAACACTAGATTCCTGTCGCTTTCGAGCAATAACCTCACTGGGATCATTCCAAAATCATTATGCAATTCAAGAAGTCTTAATATTCTTGATCTGTCCAATAATTCTTTGAGTGGCACAGTTCCCCGGTGCTTGACTACAATGAGCACGCTTGGAGTACTCAATTTAAGGAGAAACAATCTTACAAATGTTAATGAATTCTCTCATAATTGCAGTTTAGAAACGCTAGACATCAGTGGAAATCAAATTCAAGGCCAGTTTTTAAAATCTCTTGTCCACTGCACCCAGTTAAAGGTTTTAAATCTTGGAAACAATCTTATAGCAGAACCATTTCCATGCTTTTTGAGAAACACATCCACCTTGCGTGTCCTTGTCTTGCGATCCAATAAATTCTATGGGCGCATTAGATGTCGCAAGACTAATGGCACTTGGCCAGTACTTCAAATCATAGACTTAGCTCACAACAATTTAAGTGGTGAAGTACCTGGAACAGCTTTGACAACTTGGCAGGCGATGAGGACTAGCAAAGATAATGCCCCATGGAAGATCAGTAACCTTCAATTTGGTTACAATGGAGCTTATTATAAAGAAGATACAGTCATGGTTAGCAACAAAGGTGTAGAGATGGAGCTGGTCAATATTTTAACCATCTTCACCTCCATTGACTTCTCATGCAACAAGTTCAACGGATCAATACCCGAGGAAATTGGAGAACTCAAATCATTGTATGCCCTCAACTTGTCCAACAATGCTTTCACAGGTGCAGTTCCATCATCATTGAGTAACTTGAATCAGCTAGAGTCTTTGGACCTCTCGAAAAACAAACTAAGCGGTCAAATCCCACCGGAGCTTACAAAACTCACTTTCCTTGAATTCTTGAATCTCTCATATAATCAATTGGTCGGGAGGATACCAAGCCGTGCTCAATTTTCAACATTTGATGCAGCTGCCTTCCAAGGTAACAAAGGATTATGGGGGCCTCCTTTAACAGCAGATAATAACACAGGGTTCTCACCACCAAAGCAGGAAGGCAGCCATTCAAATCCCGGACATGAGATTGATTGGGATATTATCTGTCCTGAAATTGGATTTACATGTGGGTTTGGCATTGTCATCGGGTCACTTTTGTTTTGCAAGAGATGGAGGAAATGGTATTATAGAGCTATGTATAACATGCTTCTAAAGATGTTCCCTCAACTGGAAGAACGATTCGGTCATCACAGGAGACATGTCTATGCACATCAAAGATACTGGAGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1072

Amino Acids

119.62

Weight (kDa)

7.96

Isoelectric Point (pI)

39.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 29 - 72 1.1e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 89 - 190 7.9e-08 Leucine-rich repeat region
LRR_14 PF23598 308 - 363 1e-06 Leucine-rich repeat region
LRR_8 PF13855 460 - 520 9.7e-08 Leucine rich repeat
LRR_8 PF13855 677 - 735 3.3e-08 Leucine rich repeat
LRR_4 PF12799 724 - 760 7.8e-06 Leucine Rich repeats (2 copies)
LRR_14 PF23598 883 - 947 3e-06 Leucine-rich repeat region
LRR_8 PF13855 893 - 952 4e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2541
AccB1I GGYRCC 1 cut(s) 603
AccB7I CCANNNNNTGG 2 cut(s) 914, 1191
AccI GTMKAC 2 cut(s) 1140, 1510
AciI CCGC 4 cut(s) 345, 372, 804, 2787
AclWI GGATC 6 cut(s) 942, 1030, 1293, 2009, 2331, 2653
AcoI YGGCCR 1 cut(s) 2387
AcuI CTGAAG 2 cut(s) 683, 908
AcyI GRCGYC 1 cut(s) 204
AfiI CCNNNNNNNGG 9 cut(s) 322, 636, 752, 914, 1191, 1505, 2248, 3041, 3154
AflIII ACRYGT 4 cut(s) 525, 648, 3050, 3184
AjnI CCWGG 3 cut(s) 751, 930, 2440
AjuI GAANNNNNNNTTGG 2 cut(s) 2693, 2725
Alw21I GWGCWC 3 cut(s) 922, 2105, 2881
Alw26I GTCTC 6 cut(s) 86, 293, 668, 797, 3175, 3205
AlwI GGATC 6 cut(s) 942, 1030, 1293, 2009, 2331, 2653
AlwNI CAGNNNCTG 1 cut(s) 931
Ama87I CYCGRG 3 cut(s) 680, 1906, 2654
AoxI GGCC 7 cut(s) 670, 743, 1125, 1418, 2209, 2387, 2933
ApeKI GCWGC 5 cut(s) 213, 249, 2900, 2903, 2988
ArsI GACNNNNNNTTYG 2 cut(s) 1122, 1154
AseI ATTAAT 1 cut(s) 1179
Asp700I GAANNNNTTC 3 cut(s) 1528, 1916, 2286
AspLEI GCGC 1 cut(s) 2358
AspS9I GGNCC 8 cut(s) 671, 743, 1031, 1125, 1418, 1690, 2764, 2933
AsuC2I CCSGG 3 cut(s) 655, 2083, 3003
AsuHPI GGTGA 4 cut(s) 1018, 2444, 2602, 2961
AvaI CYCGRG 3 cut(s) 680, 1906, 2654
AvaII GGWCC 3 cut(s) 1031, 1690, 2764
AxyI CCTNAGG 1 cut(s) 635
BaeI ACNNNNGTAYC 2 cut(s) 1352, 1385
BalI TGGCCA 1 cut(s) 2389
BanI GGYRCC 1 cut(s) 603
BanII GRGCYC 1 cut(s) 922
BarI GAAGNNNNNNTAC 4 cut(s) 1344, 1376, 1407, 1439
BauI CACGAG 1 cut(s) 125
Bbv12I GWGCWC 3 cut(s) 922, 2105, 2881
BbvI GCAGC 5 cut(s) 225, 261, 2890, 2912, 3000
BceAI ACGGC 3 cut(s) 201, 596, 2859
BcgI CGANNNNNNTGC 8 cut(s) 671, 705, 1294, 1328, 1393, 1427, 3052, 3086
BciT130I CCWGG 3 cut(s) 753, 932, 2442
BciVI GTATCC 1 cut(s) 2859
BclI TGATCA 1 cut(s) 33
BcnI CCSGG 3 cut(s) 655, 2083, 3003
BcoDI GTCTC 6 cut(s) 86, 293, 668, 797, 3175, 3205
BfaI CTAG 9 cut(s) 1292, 1377, 1463, 1781, 1898, 1965, 2183, 2478, 2753
BfuI GTATCC 1 cut(s) 2859
BglII AGATCT 3 cut(s) 258, 831, 1465
BisI GCNGC 5 cut(s) 214, 250, 2901, 2904, 2989
BlsI GCNGC 5 cut(s) 215, 251, 2902, 2905, 2990
BmcAI AGTACT 4 cut(s) 181, 474, 2115, 2394
Bme1390I CCNGG 6 cut(s) 655, 753, 932, 2083, 2442, 3003
Bme18I GGWCC 3 cut(s) 1031, 1690, 2764
BmeT110I CYCGRG 3 cut(s) 680, 1906, 2654
BmgT120I GGNCC 8 cut(s) 671, 743, 1031, 1125, 1418, 1690, 2764, 2933
BmiI GGNNCC 3 cut(s) 605, 892, 2934
BmrFI CCNGG 6 cut(s) 655, 753, 932, 2083, 2442, 3003
BmrI ACTGGG 2 cut(s) 2007, 2236
BmsI GCATC 3 cut(s) 124, 1268, 2887
BmuI ACTGGG 2 cut(s) 2007, 2236
BpmI CTGGAG 1 cut(s) 1213
BpuEI CTTGAG 4 cut(s) 415, 1332, 1639, 1681
BpuMI CCSGG 3 cut(s) 655, 2083, 3003
BsaHI GRCGYC 1 cut(s) 204
BsaI GGTCTC 2 cut(s) 668, 797
BsaJI CCNNGG 5 cut(s) 908, 2081, 2495, 2655, 2911
BsaWI WCCGGW 2 cut(s) 1028, 2800
BsaXI ACNNNNNCTCC 2 cut(s) 1729, 1759
Bsc4I CCNNNNNNNGG 9 cut(s) 322, 636, 752, 914, 1191, 1505, 2248, 3041, 3154
Bse21I CCTNAGG 1 cut(s) 635
Bse3DI GCAATG 2 cut(s) 101, 1891
BseBI CCWGG 3 cut(s) 753, 932, 2442
BseDI CCNNGG 5 cut(s) 908, 2081, 2495, 2655, 2911
BseGI GGATG 4 cut(s) 57, 368, 1086, 2309
BseLI CCNNNNNNNGG 9 cut(s) 322, 636, 752, 914, 1191, 1505, 2248, 3041, 3154
BseMI GCAATG 2 cut(s) 101, 1891
BseMII CTCAG 5 cut(s) 276, 649, 681, 808, 1511
BseXI GCAGC 5 cut(s) 225, 261, 2890, 2912, 3000
BseYI CCCAGC 2 cut(s) 61, 1255
BsgI GTGCAG 2 cut(s) 2221, 2739
BshFI GGCC 7 cut(s) 672, 745, 1127, 1420, 2211, 2389, 2935
BshNI GGYRCC 1 cut(s) 603
BsiHKAI GWGCWC 3 cut(s) 922, 2105, 2881
BsiHKCI CYCGRG 3 cut(s) 680, 1906, 2654
BsiSI CCGG 5 cut(s) 654, 1029, 2083, 2801, 3003
BslFI GGGAC 1 cut(s) 670
BslI CCNNNNNNNGG 9 cut(s) 322, 636, 752, 914, 1191, 1505, 2248, 3041, 3154
BsmAI GTCTC 6 cut(s) 86, 293, 668, 797, 3175, 3205
BsmBI CGTCTC 1 cut(s) 3205
BsmFI GGGAC 1 cut(s) 670
BsmI GAATGC 1 cut(s) 178
BsnI GGCC 7 cut(s) 672, 745, 1127, 1420, 2211, 2389, 2935
Bso31I GGTCTC 2 cut(s) 668, 797
BsoBI CYCGRG 3 cut(s) 680, 1906, 2654
Bsp1286I GDGCHC 3 cut(s) 922, 2105, 2881
Bsp19I CCATGG 1 cut(s) 2495
BspACI CCGC 4 cut(s) 345, 372, 804, 2787
BspANI GGCC 7 cut(s) 672, 745, 1127, 1420, 2211, 2389, 2935
BspCNI CTCAG 5 cut(s) 275, 648, 680, 807, 1512
BspLI GGNNCC 3 cut(s) 605, 892, 2934
BspPI GGATC 6 cut(s) 942, 1030, 1293, 2009, 2331, 2653
BspQI GCTCTTC 1 cut(s) 927
BspT107I GGYRCC 1 cut(s) 603
BspTNI GGTCTC 2 cut(s) 668, 797
BsrDI GCAATG 2 cut(s) 101, 1891
BssECI CCNNGG 5 cut(s) 908, 2081, 2495, 2655, 2911
BssNI GRCGYC 1 cut(s) 204
BssSI CACGAG 1 cut(s) 125
BssT1I CCWWGG 3 cut(s) 908, 2495, 2911
Bst2BI CACGAG 1 cut(s) 125
Bst2UI CCWGG 3 cut(s) 753, 932, 2442
Bst4CI ACNGT 3 cut(s) 784, 2077, 2554
Bst6I CTCTTC 4 cut(s) 296, 455, 927, 1278
BstACI GRCGYC 1 cut(s) 204
BstC8I GCNNGC 4 cut(s) 1445, 1517, 2105, 2466
BstDEI CTNAG 8 cut(s) 262, 635, 667, 794, 938, 1520, 2410, 2783
BstDSI CCRYGG 1 cut(s) 2495
BstF5I GGATG 4 cut(s) 57, 368, 1086, 2309
BstHHI GCGC 1 cut(s) 2358
BstMAI GTCTC 6 cut(s) 86, 293, 668, 797, 3175, 3205
BstMWI GCNNNNNNNGC 2 cut(s) 210, 1396
BstNI CCWGG 3 cut(s) 753, 932, 2442
BstNSI RCATGY 5 cut(s) 529, 652, 3054, 3133, 3188
BstSCI CCNGG 6 cut(s) 653, 751, 930, 2081, 2440, 3001
BstV1I GCAGC 5 cut(s) 225, 261, 2890, 2912, 3000
BstX2I RGATCY 4 cut(s) 258, 831, 934, 1465
BstXI CCANNNNNNTGG 3 cut(s) 887, 1712, 1853
BstYI RGATCY 4 cut(s) 258, 831, 934, 1465
Bsu36I CCTNAGG 1 cut(s) 635
BsuI GTATCC 1 cut(s) 2859
BsuRI GGCC 7 cut(s) 672, 745, 1127, 1420, 2211, 2389, 2935
BtgI CCRYGG 1 cut(s) 2495
BtgZI GCGATG 1 cut(s) 2483
BtsCI GGATG 4 cut(s) 57, 368, 1086, 2309
BtsI GCAGTG 2 cut(s) 70, 2233
BtsIMutI CAGTG 6 cut(s) 70, 83, 1189, 1995, 2197, 2233
Cac8I GCNNGC 4 cut(s) 1445, 1517, 2105, 2466
CaiI CAGNNNCTG 1 cut(s) 931
CfoI GCGC 1 cut(s) 2358
Cfr13I GGNCC 8 cut(s) 671, 743, 1031, 1125, 1418, 1690, 2764, 2933
CpoI CGGWCCG 1 cut(s) 1031
CseI GACGC 1 cut(s) 193
CspCI CAANNNNNGTGG 2 cut(s) 2410, 2445
CspI CGGWCCG 1 cut(s) 1031
DdeI CTNAG 8 cut(s) 262, 635, 667, 794, 938, 1520, 2410, 2783
DraI TTTAAA 2 cut(s) 2220, 2256
EaeI YGGCCR 1 cut(s) 2387
Eam1104I CTCTTC 4 cut(s) 296, 455, 927, 1278
EarI CTCTTC 4 cut(s) 296, 455, 927, 1278
EciI GGCGGA 1 cut(s) 361
Ecl136II GAGCTC 1 cut(s) 920
Eco130I CCWWGG 3 cut(s) 908, 2495, 2911
Eco24I GRGCYC 1 cut(s) 922
Eco31I GGTCTC 2 cut(s) 668, 797
Eco47I GGWCC 3 cut(s) 1031, 1690, 2764
Eco53kI GAGCTC 1 cut(s) 920
Eco57I CTGAAG 2 cut(s) 683, 908
Eco81I CCTNAGG 1 cut(s) 635
Eco88I CYCGRG 3 cut(s) 680, 1906, 2654
EcoICRI GAGCTC 1 cut(s) 920
EcoO109I RGGNCCY 2 cut(s) 671, 2933
EcoRI GAATTC 3 cut(s) 902, 2153, 2828
EcoRII CCWGG 3 cut(s) 751, 930, 2440
EcoT14I CCWWGG 3 cut(s) 908, 2495, 2911
EcoT38I GRGCYC 1 cut(s) 922
ErhI CCWWGG 3 cut(s) 908, 2495, 2911
Esp3I CGTCTC 1 cut(s) 3205
FaqI GGGAC 1 cut(s) 670
FauI CCCGC 1 cut(s) 797
FbaI TGATCA 1 cut(s) 33
FblI GTMKAC 2 cut(s) 1140, 1510
Fnu4HI GCNGC 5 cut(s) 214, 250, 2901, 2904, 2989
FokI GGATG 4 cut(s) 44, 355, 1093, 2296
FriOI GRGCYC 1 cut(s) 922
Fsp4HI GCNGC 5 cut(s) 214, 250, 2901, 2904, 2989
FspBI CTAG 9 cut(s) 1292, 1377, 1463, 1781, 1898, 1965, 2183, 2478, 2753
GlaI GCGC 1 cut(s) 2357
GluI GCNGC 5 cut(s) 214, 250, 2901, 2904, 2989
GsaI CCCAGC 2 cut(s) 65, 1259
GsuI CTGGAG 1 cut(s) 1213
HaeIII GGCC 7 cut(s) 672, 745, 1127, 1420, 2211, 2389, 2935
HapII CCGG 5 cut(s) 654, 1029, 2083, 2801, 3003
HgaI GACGC 1 cut(s) 193
HhaI GCGC 1 cut(s) 2358
Hin1I GRCGYC 1 cut(s) 204
Hin6I GCGC 1 cut(s) 2356
HinP1I GCGC 1 cut(s) 2356
HincII GTYRAC 2 cut(s) 1141, 1960
HindII GTYRAC 2 cut(s) 1141, 1960
HindIII AAGCTT 1 cut(s) 695
HinfI GANTC 9 cut(s) 683, 756, 1229, 1784, 1968, 2746, 2756, 2836, 3165
HpaI GTTAAC 1 cut(s) 1960
HpaII CCGG 5 cut(s) 654, 1029, 2083, 2801, 3003
HphI GGTGA 4 cut(s) 1018, 2444, 2602, 2961
Hpy166II GTNNAC 7 cut(s) 70, 535, 999, 1141, 1511, 1960, 2233
Hpy188I TCNGA 6 cut(s) 265, 380, 405, 586, 797, 1699
Hpy8I GTNNAC 7 cut(s) 70, 535, 999, 1141, 1511, 1960, 2233
HpyCH4III ACNGT 3 cut(s) 784, 2077, 2554
HpyCH4IV ACGT 3 cut(s) 1322, 1367, 3214
HpyF10VI GCNNNNNNNGC 2 cut(s) 210, 1396
HpyF3I CTNAG 8 cut(s) 262, 635, 667, 794, 938, 1520, 2410, 2783
HpySE526I ACGT 3 cut(s) 1322, 1367, 3214
Hsp92I GRCGYC 1 cut(s) 204
HspAI GCGC 1 cut(s) 2356
Ksp22I TGATCA 1 cut(s) 33
KspAI GTTAAC 1 cut(s) 1960
LguI GCTCTTC 1 cut(s) 927
LmnI GCTCC 5 cut(s) 111, 917, 2531, 2584, 2803
Lsp1109I GCAGC 5 cut(s) 225, 261, 2890, 2912, 3000
LweI GCATC 3 cut(s) 124, 1268, 2887
MaeI CTAG 9 cut(s) 1292, 1377, 1463, 1781, 1898, 1965, 2183, 2478, 2753
MaeII ACGT 3 cut(s) 1322, 1367, 3214
MaeIII GTNAC 9 cut(s) 205, 347, 840, 1088, 2507, 2522, 2738, 2915, 3075
MfeI CAATTG 2 cut(s) 1064, 2852
MflI RGATCY 4 cut(s) 258, 831, 934, 1465
MhlI GDGCHC 3 cut(s) 922, 2105, 2881
MlsI TGGCCA 1 cut(s) 2389
MluNI TGGCCA 1 cut(s) 2389
MlyI GAGTC 2 cut(s) 692, 2765
MmeI TCCRAC 6 cut(s) 447, 487, 1179, 1263, 1866, 2724
Mox20I TGGCCA 1 cut(s) 2389
MroXI GAANNNNTTC 3 cut(s) 1528, 1916, 2286
MscI TGGCCA 1 cut(s) 2389
MslI CAYNNNNRTG 2 cut(s) 2290, 3189
Msp20I TGGCCA 1 cut(s) 2389
MspA1I CMGCKG 2 cut(s) 1519, 2903
MspI CCGG 5 cut(s) 654, 1029, 2083, 2801, 3003
MspR9I CCNGG 6 cut(s) 655, 753, 932, 2083, 2442, 3003
MunI CAATTG 2 cut(s) 1064, 2852
Mva1269I GAATGC 1 cut(s) 178
MvaI CCWGG 3 cut(s) 753, 932, 2442
MwoI GCNNNNNNNGC 2 cut(s) 210, 1396
NciI CCSGG 3 cut(s) 655, 2083, 3003
NcoI CCATGG 1 cut(s) 2495
NlaIV GGNNCC 3 cut(s) 605, 892, 2934
NmeAIII GCCGAG 1 cut(s) 632
NmuCI GTSAC 2 cut(s) 205, 3075
NspI RCATGY 5 cut(s) 529, 652, 3054, 3133, 3188
PaeR7I CTCGAG 2 cut(s) 680, 1906
PciI ACATGT 4 cut(s) 525, 648, 3050, 3184
PciSI GCTCTTC 1 cut(s) 927
PctI GAATGC 1 cut(s) 178
PdmI GAANNNNTTC 3 cut(s) 1528, 1916, 2286
PfeI GAWTC 7 cut(s) 756, 1229, 1784, 1968, 2746, 2836, 3165
PflMI CCANNNNNTGG 2 cut(s) 914, 1191
PfoI TCCNGGA 2 cut(s) 751, 3001
PkrI GCNGC 5 cut(s) 215, 251, 2902, 2905, 2990
PleI GAGTC 2 cut(s) 691, 2764
PpsI GAGTC 2 cut(s) 691, 2764
PscI ACATGT 4 cut(s) 525, 648, 3050, 3184
PshBI ATTAAT 1 cut(s) 1179
PsiI TTATAA 1 cut(s) 2541
Psp124BI GAGCTC 1 cut(s) 922
Psp6I CCWGG 3 cut(s) 751, 930, 2440
PspFI CCCAGC 2 cut(s) 61, 1255
PspGI CCWGG 3 cut(s) 751, 930, 2440
PspN4I GGNNCC 3 cut(s) 605, 892, 2934
PspPI GGNCC 8 cut(s) 671, 743, 1031, 1125, 1418, 1690, 2764, 2933
PstNI CAGNNNCTG 1 cut(s) 931
PsuI RGATCY 4 cut(s) 258, 831, 934, 1465
PvuII CAGCTG 2 cut(s) 1519, 2903
RseI CAYNNNNRTG 2 cut(s) 2290, 3189
Rsr2I CGGWCCG 1 cut(s) 1031
RsrII CGGWCCG 1 cut(s) 1031
SacI GAGCTC 1 cut(s) 922
SalI GTCGAC 1 cut(s) 1139
SapI GCTCTTC 1 cut(s) 927
SatI GCNGC 5 cut(s) 214, 250, 2901, 2904, 2989
Sau96I GGNCC 8 cut(s) 671, 743, 1031, 1125, 1418, 1690, 2764, 2933
ScaI AGTACT 4 cut(s) 181, 474, 2115, 2394
SchI GAGTC 2 cut(s) 692, 2765
ScrFI CCNGG 6 cut(s) 655, 753, 932, 2083, 2442, 3003
SduI GDGCHC 3 cut(s) 922, 2105, 2881
SfaNI GCATC 3 cut(s) 124, 1268, 2887
Sfr274I CTCGAG 2 cut(s) 680, 1906
SinI GGWCC 3 cut(s) 1031, 1690, 2764
SlaI CTCGAG 2 cut(s) 680, 1906
SmiMI CAYNNNNRTG 2 cut(s) 2290, 3189
SmlI CTYRAG 6 cut(s) 394, 680, 1347, 1618, 1660, 1906
SmoI CTYRAG 6 cut(s) 394, 680, 1347, 1618, 1660, 1906
SsiI CCGC 4 cut(s) 345, 372, 804, 2787
SspI AATATT 2 cut(s) 2041, 2596
SspMI CTAG 9 cut(s) 1292, 1377, 1463, 1781, 1898, 1965, 2183, 2478, 2753
SstI GAGCTC 1 cut(s) 922
StyD4I CCNGG 6 cut(s) 653, 751, 930, 2081, 2440, 3001
StyI CCWWGG 3 cut(s) 908, 2495, 2911
TaaI ACNGT 3 cut(s) 784, 2077, 2554
TaiI ACGT 3 cut(s) 1325, 1370, 3217
TaqII GACCGA 2 cut(s) 1048, 3158
TatI WGTACW 4 cut(s) 179, 472, 2113, 2392
TfiI GAWTC 7 cut(s) 756, 1229, 1784, 1968, 2746, 2836, 3165
TscAI CASTG 6 cut(s) 77, 83, 1196, 2002, 2197, 2240
TseFI GTSAC 2 cut(s) 205, 3075
TseI GCWGC 5 cut(s) 213, 249, 2900, 2903, 2988
Tsp45I GTSAC 2 cut(s) 205, 3075
TspDTI ATGAA 4 cut(s) 17, 290, 1841, 2166
TspGWI ACGGA 3 cut(s) 348, 1101, 2658
TspRI CASTG 6 cut(s) 77, 83, 1196, 2002, 2197, 2240
Van91I CCANNNNNTGG 2 cut(s) 914, 1191
VpaK11BI GGWCC 3 cut(s) 1031, 1690, 2764
VspI ATTAAT 1 cut(s) 1179
XbaI TCTAGA 2 cut(s) 1462, 1897
XceI RCATGY 5 cut(s) 529, 652, 3054, 3133, 3188
XhoI CTCGAG 2 cut(s) 680, 1906
XmiI GTMKAC 2 cut(s) 1140, 1510
XmnI GAANNNNTTC 3 cut(s) 1528, 1916, 2286
XspI CTAG 9 cut(s) 1292, 1377, 1463, 1781, 1898, 1965, 2183, 2478, 2753
ZrmI AGTACT 4 cut(s) 181, 474, 2115, 2394
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.