Prupe.8G054300_v2.0.a1

receptor-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000047
Physical Location & Seq
Forward (+)
6196459 .. 6201344
4886 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G054300.1

Sequence Viewer

Length: 2691 bp
ATGGCGAGGAACATGAGCGCCAATCAGAAGTGCTCGGGCAGTTTCAAGAAGATGTCGATTCTTTCGTTCAGCAACACCATTTTGTTGCGGTGTCTGAGAACAAGTCGTCTTATGGATAATTCCATGTTGTTGGAAGTAAGTTTGAAAGTCATGATTGACAAATTCTCCACCATTGTCCAAGCGAAGAATCTGGATTTGAGCATTAAACTGAGTTTTCATCTGTTTGTGGAAGGACTGAAAACAGGAAAACACTTCGTTTTTATTCTTCAGTTCCTTGCCAACTTTTCAAACCTAAGAGTGTTGGACTTGAGGTATAACAACATCTCCGGTCCAATTCCAGTATCCTTTGCCAACTTTTCAAACCTGAGGGTGTTGGACTTGAAGTCGAACGACATCTCCGGTCCAATTCCAGGATCCTTTGCCAACTTTCCAAACCTGAGGGTGTTGGACTTGAAGTCGAACGACATCTCAGATCCAATTCCAGGATCCTTTGCCAACTTTCCAAACCTGAGGCAGTTGGACTTGAGTTCGAACCCCATCTCTGATCCACTTCCAGGATTCTTTGCCAATTTTTCAAAGTTGACTTCCTTGAGTCTCAGTGATTGTCAGTTGAATGGAACATTTCCCAAAGAGATCTTTCAGGTACCTACTCTACTAACTATTGACCTTTCGGGTAATTTTAAACTTGGTGGTTCCTTGCCCAAATTTCCCAAGAACAATGGATCTCTTCGGTCCTTGAATCTATTTGGGACAAACTTTTCAGGATCACTCCCCGACTCCATTGGCAACCTCAAAATGTTGTCCATGATAGATCTTTCATATTGCAATTTCTATGGATCAATCCCAATGTCAATGGAAAACCTAACACAATTGGTTAGTTTGTACATGCAATCGCAAAGGTTCCATGGTCCAATAGATTCTATTAACTGGGAAAATCTTATTAATCTGGAAGATTTCAAGTTGAACGAGAATCGATTCGAGGGGAGTATTCCATCGTCTCTCTTTGCTCTTCCCTTATTGCTACAACTAAACCTTTCCCACAATCAATTCTCAGGTGAACTTGCATTTTCTAATGTCTCTTCCAATTTAGCTGTCCTTGATTTAAGCTTCAACAATTTGGAAGGACAAATATCGGTGTCTATATTGAATTTTGGAGGCCTTCAATCACTTGGTCTTTCTTCCAACAATTTCAATGCCTTTCCGTTCAATGGCCCTCAACAGCTAAAATATCTTACGAACATCGACCCTTCAAACAATTGGTTGCTGGGTTTATACAATGGTACTGATTCCTCATACTCCTCGTTTCCTCAAATTGTTTCATTGAATTTGGCTGCTAACAATTTGACAACAATCCCATATTTCTTGAGAAATCAATCCACATTATCCAGTTTGAACCTTTCAGAAAACCATATCCAGGGCAAGATACCTCATTGGATTTGGAGTTCCAATCAACTTGATTCCCTAAATATTTCTTGTAACTCCTTGGTTACTCTGGAACCTCCTTTATATAATTCTATGTATCTGGATTACTCGAGAAATAATTTCCACTCTATACCATCAAATATTGGTGATTTCCTCACAAACGCACTGTTCTTCTCTCTTTCGATCAATAACTTGCATGGGCTCATTCCAACATCAATATGCAATGCCCCTAATATTCGTATTCTTGATATGTCTAATAATTCTCTCAGTGGCATGATTCCTCATTGCTTGACTGCAATGCGCAATATCAGTGTACTTAACTTAGCGAGAAACAACCTCACTGGAACTATTTCTAATTTTGAAGTTTCTAAAGATAGTTCATTGGAAATTCTAGAGATCAGTAGAAATCAGTTAGGTGGCCAGGTTCCAAAATCTCTAGCTAAATGCACTAAGTTGGAGGTTTTAAACATGGGAAACAATAATATAATAGATAGCTTCCCATGCTTGTTGAAGAGCATTTCCACCATGCGTGTCCTTGTTTTGCGGTCCAACAACTTTTATGGAGGAGGCATGGAATGTCTCAACACCAATGGCACCTGGCCAGGGCTTCAAATCATAGACCTAGCTCACAATAATTTCCGTGGTGAAATACAAGGAATACTTTGGAGAACATGGCAGAAAATGATGCCACGGTTGAATGGACCAATACCTAAGGAAATGGGAGCTTTCAAATCATTATATGTCAACTTGTCTAGCAATGCTTTCACAGGCGAAATCCAATCGTCATTTGGTAACATGAGTGCACTCGAGTGCTTGGACCTGTCACAGAACAAGCTGAGCGGGCACATTCCACAAGAGTTGGAAAATCTTACTTTCATTTCGTTCTTGAATCTCTCAAATAATGAATTGGTCGGCAGGATCCGAACCAGTACTCAGTTTTCAACATTTCCCAAAGCCTCCTTTATAGGTAACAAAGGACTATGGGGTCCTCCTTTGATAGTGGATAACAAAGAAGGATTGTCACCACCACCAACAGTGAATAGAAGGCCTCCAAATTCTGGACATCATTATGAGGTTAATTGGGATCTTGTCAGTGTCGAACTTGGATTTACATTTGGCTTTGGAGTTGCCATTGGATCACTTGTGTTGTGCAAGAGATGGAGTAAGTGGTATTACAGAGCTGTGTACAGCATCCTTCTCAAGATATTCCCTCAGTTGGAGGAAAGAATTGGTATTCGTCGAAGACATGTTCACATAAATCAAAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

897

Amino Acids

99.82

Weight (kDa)

8.89

Isoelectric Point (pI)

40.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000047)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g13590 FvH4_6g10800 FvH4_6g11080 FvH4_6g11081 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g11660 FvH4_6g21370 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21371 FvH4_6g21373 FvH4_6g21374 FvH4_6g21375 FvH4_6g21378 FvH4_7g13570
malus_domestica MD00G1166300.v1.1 MD04G1159400.v1.1 MD04G1159500.v1.1 MD04G1159700.v1.1 MD04G1159800.v1.1 MD04G1160600.v1.1 MD04G1160700.v1.1 MD04G1160800.v1.1 MD04G1161000.v1.1 MD04G1161100.v1.1 MD04G1161200.v1.1 MD04G1161300.v1.1 MD04G1161600.v1.1 MD04G1161700.v1.1 MD04G1210900.v1.1 MD05G1095100.v1.1 MD05G1095300.v1.1 MD05G1095400.v1.1 MD05G1095600.v1.1 MD08G1062000.v1.1 MD08G1062100.v1.1 MD12G1152900.v1.1 MD12G1153300.v1.1 MD12G1172900.v1.1 MD12G1173400.v1.1 MD12G1173600.v1.1 MD12G1173700.v1.1 MD12G1173800.v1.1 MD12G1174000.v1.1 MD12G1174100.v1.1 MD12G1174400.v1.1 MD12G1175000.v1.1
prunus_persica Prupe.6G281000_v2.0.a1 Prupe.6G281100_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281200_v2.0.a1 Prupe.6G281300_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281400_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G281500_v2.0.a1 Prupe.6G288800_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.7G088700_v2.0.a1 Prupe.8G054300_v2.0.a1 Prupe.8G054400_v2.0.a1
pyrus_communis pycom04g14110 pycom04g14120 pycom04g14130 pycom04g14180 pycom04g14390 pycom04g14410 pycom04g14420 pycom04g14430 pycom04g14450 pycom04g14460 pycom12g14600 pycom12g14610 pycom12g16390 pycom12g16430 pycom12g16460 pycom12g16470 pycom12g16480 pycom12g16490 pycom12g16580 pycom12g16600
rosa_chinensis RchiOBHm_Chr0c32g0501501 RchiOBHm_Chr0c32g0501511 RchiOBHm_Chr0c32g0501521 RchiOBHm_Chr0c39g0503191 RchiOBHm_Chr0c39g0503201 RchiOBHm_Chr0c39g0503231 RchiOBHm_Chr0c39g0503261 RchiOBHm_Chr0c39g0503271 RchiOBHm_Chr0c39g0503311 RchiOBHm_Chr0c39g0503331 RchiOBHm_Chr1g0316151 RchiOBHm_Chr1g0316251 RchiOBHm_Chr1g0316291 RchiOBHm_Chr1g0351861 RchiOBHm_Chr1g0351911 RchiOBHm_Chr1g0353121 RchiOBHm_Chr1g0353151 RchiOBHm_Chr1g0353161 RchiOBHm_Chr1g0353221 RchiOBHm_Chr1g0353251 RchiOBHm_Chr1g0353271 RchiOBHm_Chr1g0353291 RchiOBHm_Chr1g0353341 RchiOBHm_Chr3g0451491 RchiOBHm_Chr3g0461851 RchiOBHm_Chr3g0461931 RchiOBHm_Chr3g0462001 RchiOBHm_Chr3g0462441 RchiOBHm_Chr3g0462461 RchiOBHm_Chr3g0462511 RchiOBHm_Chr3g0463331 RchiOBHm_Chr3g0463341 RchiOBHm_Chr3g0463351 RchiOBHm_Chr3g0477991 RchiOBHm_Chr3g0478021 RchiOBHm_Chr3g0478031 RchiOBHm_Chr3g0478051 RchiOBHm_Chr3g0478091 RchiOBHm_Chr3g0478101 RchiOBHm_Chr3g0478141 RchiOBHm_Chr3g0478161 RchiOBHm_Chr3g0478181 RchiOBHm_Chr3g0478191 RchiOBHm_Chr3g0478311 RchiOBHm_Chr3g0478331 RchiOBHm_Chr3g0478381 RchiOBHm_Chr3g0478431 RchiOBHm_Chr3g0478451 RchiOBHm_Chr3g0478491 RchiOBHm_Chr3g0478511 RchiOBHm_Chr3g0478551 RchiOBHm_Chr3g0478561 RchiOBHm_Chr3g0478581 RchiOBHm_Chr3g0478601 RchiOBHm_Chr3g0481181 RchiOBHm_Chr3g0483751 RchiOBHm_Chr3g0483761 RchiOBHm_Chr3g0483771 RchiOBHm_Chr3g0483781 RchiOBHm_Chr5g0037311 RchiOBHm_Chr5g0039781 RchiOBHm_Chr5g0039851 RchiOBHm_Chr5g0048141 RchiOBHm_Chr6g0257231
rosa_laevigata RLG00000008156 RLG00000019550 RLG00000019551 RLG00000022912 RLG00000022914 RLG00000023271 RLG00000023639 RLG00000023640 RLG00000023644 RLG00000023646 RLG00000023648 RLG00000023650 RLG00000023654 RLG00000023658 RLG00000023660 RLG00000023661 RLG00000023662 RLG00000023664 RLG00000023666 RLG00000023670 RLG00000023671 RLG00000023672 RLG00000023673 RLG00000023882 RLG00000024789 RLG00000024854 RLG00000024855 RLG00000024856 RLG00000024859 RLG00000024860 RLG00000024886 RLG00000024891 RLG00000024892 RLG00000024972 RLG00000028274 RLG00000028275 RLG00000028277 RLG00000028279 RLG00000028281 RLG00000028283 RLG00000028285 RLG00000028287 RLG00000028376 RLG00000030078 RLG00000030682 RLG00000030690 RLG00000033943 RLG00000033946
rosa_multiflora Rmu_co8376673.1_g000001 Rmu_sc0000103.1_g000026 Rmu_sc0000295.1_g000035 Rmu_sc0000923.1_g000003 Rmu_sc0000923.1_g000005 Rmu_sc0001207.1_g000038 Rmu_sc0001207.1_g000054 Rmu_sc0001207.1_g000059 Rmu_sc0001207.1_g000069 Rmu_sc0001207.1_g000073 Rmu_sc0001207.1_g000080 Rmu_sc0001218.1_g000002 Rmu_sc0001218.1_g000019 Rmu_sc0001218.1_g000039 Rmu_sc0001218.1_g000041 Rmu_sc0001218.1_g000042 Rmu_sc0001218.1_g000047 Rmu_sc0001228.1_g000001 Rmu_sc0001333.1_g000006 Rmu_sc0001431.1_g000002 Rmu_sc0001431.1_g000003 Rmu_sc0001487.1_g000001 Rmu_sc0001518.1_g000007 Rmu_sc0001518.1_g000008 Rmu_sc0001933.1_g000003 Rmu_sc0002151.1_g000010 Rmu_sc0002151.1_g000011 Rmu_sc0002531.1_g000014 Rmu_sc0002531.1_g000017 Rmu_sc0003078.1_g000003 Rmu_sc0003078.1_g000006 Rmu_sc0003078.1_g000013 Rmu_sc0003078.1_g000018 Rmu_sc0003078.1_g000020 Rmu_sc0003326.1_g000001 Rmu_sc0003624.1_g000002 Rmu_sc0003624.1_g000010 Rmu_sc0003624.1_g000011 Rmu_sc0003624.1_g000013 Rmu_sc0003624.1_g000014 Rmu_sc0003850.1_g000006 Rmu_sc0003850.1_g000007 Rmu_sc0004308.1_g000017 Rmu_sc0004308.1_g000020 Rmu_sc0004308.1_g000025 Rmu_sc0004778.1_g000001 Rmu_sc0004888.1_g000006 Rmu_sc0005196.1_g000010 Rmu_sc0005196.1_g000011 Rmu_sc0005313.1_g000001 Rmu_sc0005657.1_g000033 Rmu_sc0005657.1_g000044 Rmu_sc0005657.1_g000052 Rmu_sc0005657.1_g000054 Rmu_sc0005657.1_g000059 Rmu_sc0005657.1_g000064 Rmu_sc0005657.1_g000071 Rmu_sc0005767.1_g000001 Rmu_sc0005767.1_g000005 Rmu_sc0005767.1_g000007 Rmu_sc0005767.1_g000023 Rmu_sc0006119.1_g000004 Rmu_sc0006539.1_g000002 Rmu_sc0006651.1_g000017 Rmu_sc0006651.1_g000021 Rmu_sc0006651.1_g000022 Rmu_sc0007105.1_g000001 Rmu_sc0007641.1_g000001 Rmu_sc0007641.1_g000006 Rmu_sc0007728.1_g000003 Rmu_sc0007777.1_g000005 Rmu_sc0007777.1_g000008 Rmu_sc0007777.1_g000010 Rmu_sc0007777.1_g000019 Rmu_sc0007777.1_g000020 Rmu_sc0007777.1_g000022 Rmu_sc0008105.1_g000002 Rmu_sc0008340.1_g000002 Rmu_sc0008559.1_g000005 Rmu_sc0008560.1_g000002 Rmu_sc0008866.1_g000005 Rmu_sc0011028.1_g000006 Rmu_sc0011028.1_g000009 Rmu_sc0011346.1_g000003 Rmu_sc0011346.1_g000004 Rmu_sc0011346.1_g000012 Rmu_sc0011461.1_g000002 Rmu_sc0013048.1_g000001 Rmu_sc0015960.1_g000001 Rmu_sc0026214.1_g000001
rosa_roxburghii Rroxscaffold_1G00041310 Rroxscaffold_1G00041400 Rroxscaffold_1G00041410 Rroxscaffold_4G00301900 Rroxscaffold_4G00301910 Rroxscaffold_4G00301970 Rroxscaffold_4G00301990 Rroxscaffold_4G00302010 Rroxscaffold_4G00302030 Rroxscaffold_4G00303460 Rroxscaffold_6G00403270 Rroxscaffold_6G00403300 Rroxscaffold_6G00403320 Rroxscaffold_6G00403330 Rroxscaffold_6G00403370 Rroxscaffold_6G00403380 Rroxscaffold_6G00403410 Rroxscaffold_6G00403420 Rroxscaffold_6G00403430 Rroxscaffold_6G00403480 Rroxscaffold_6G00403540 Rroxscaffold_6G00406750 Rroxscaffold_6G00416600 Rroxscaffold_6G00416620 Rroxscaffold_6G00416630 Rroxscaffold_6G00416640 Rroxscaffold_6G00417470 Rroxscaffold_6G00417510 Rroxscaffold_6G00417810 Rroxscaffold_6G00417860 Rroxscaffold_6G00419140
rosa_rugosa Rorug01G0009600 Rorug01G0222400 Rorug01G0222700 Rorug01G0222900 Rorug01G0233900 Rorug01G0234100 Rorug01G0234200 Rorug01G0234400 Rorug01G0235200 Rorug03G0054200 Rorug03G0056600 Rorug03G0056700 Rorug03G0056800 Rorug03G0056900 Rorug03G0057200 Rorug03G0064100 Rorug03G0064100 Rorug03G0064200 Rorug03G0165200 Rorug03G0165300 Rorug03G0165300 Rorug03G0165500 Rorug03G0165500 Rorug03G0165600 Rorug03G0165700 Rorug03G0165900 Rorug03G0166000 Rorug03G0166200 Rorug03G0166300 Rorug03G0166400 Rorug03G0166500 Rorug03G0166700 Rorug04G0127000 Rorug05G0182500 Rorug05G0182900 Rorug05G0183000
rosa_samantha Rh1DG234000 Rh1DG243600 Rh1DG243700 Rh2AG645000 Rh3AG115000 Rh3BG118400 Rh3CG121200 Rh3CG121300 Rh3CG121700 Rh3CG121800 Rh3CG121900 Rh3CG128300 Rh3CG128500 Rh3CG243700 Rh3CG244200 Rh3CG244500 Rh3CG246000 Rh3CG246300 Rh3CG246400 Rh3CG246500 Rh3CG247000 Rh3DG120400 Rh4DG032600 Rh5AG319500 Rh5DG280900 Rh5DG337500 Rh6CG079500
rosa_wichuraiana Rw0G003790 Rw0G006960 Rw0G010120 Rw0G018070 Rw1G001290 Rw1G020570 Rw1G020590 Rw1G021380 Rw1G021390 Rw1G021440 Rw1G021540 Rw2G052980 Rw3G009520 Rw3G009740 Rw3G010350 Rw3G019410 Rw3G019560 Rw3G019590 Rw3G019600 Rw3G019610 Rw3G019620 Rw3G019630 Rw3G019650 Rw4G015840 Rw5G025130 Rw5G025840 Rw6G007960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2406
Acc16I TGCGCA 1 cut(s) 1724
Acc65I GGTACC 1 cut(s) 643
AccB1I GGYRCC 2 cut(s) 643, 2015
AccB7I CCANNNNNTGG 1 cut(s) 2480
AccBSI CCGCTC 1 cut(s) 2262
AciI CCGC 3 cut(s) 88, 1966, 2262
AcoI YGGCCR 2 cut(s) 1840, 2021
AcsI RAATTY 6 cut(s) 161, 704, 1147, 1324, 1809, 2476
AcuI CTGAAG 1 cut(s) 251
AfaI GTAC 6 cut(s) 645, 884, 1282, 1737, 2353, 2609
AfiI CCNNNNNNNGG 8 cut(s) 410, 482, 554, 1208, 1414, 2025, 2480, 2638
AflIII ACRYGT 1 cut(s) 2668
AhdI GACNNNNNGTC 2 cut(s) 382, 454
AjnI CCWGG 7 cut(s) 409, 481, 553, 1413, 1842, 2018, 2023
AleI CACNNNNGTG 1 cut(s) 2230
AloI GAACNNNNNNTCC 4 cut(s) 380, 412, 1426, 1458
AluBI AGCT 9 cut(s) 1091, 1107, 1222, 1862, 1917, 2048, 2147, 2257, 2603
AluI AGCT 9 cut(s) 1091, 1107, 1222, 1862, 1917, 2048, 2147, 2257, 2603
Alw21I GWGCWC 2 cut(s) 35, 2227
Alw26I GTCTC 4 cut(s) 599, 1002, 1081, 2006
Alw44I GTGCAC 1 cut(s) 2223
Ama87I CYCGRG 3 cut(s) 34, 1531, 2228
AoxI GGCC 5 cut(s) 1156, 1210, 1840, 2021, 2468
ApaLI GTGCAC 1 cut(s) 2223
ApeKI GCWGC 1 cut(s) 1331
ApoI RAATTY 6 cut(s) 161, 704, 1147, 1324, 1809, 2476
AseI ATTAAT 1 cut(s) 942
Asp700I GAANNNNTTC 2 cut(s) 974, 1771
Asp718I GGTACC 1 cut(s) 643
AspLEI GCGC 2 cut(s) 20, 1725
AspS9I GGNCC 9 cut(s) 329, 401, 732, 908, 1211, 1968, 2123, 2239, 2408
AsuHPI GGTGA 4 cut(s) 1067, 1580, 2078, 2436
AsuII TTCGAA 1 cut(s) 530
AvaI CYCGRG 3 cut(s) 34, 1531, 2228
AvaII GGWCC 8 cut(s) 329, 401, 732, 908, 1968, 2123, 2239, 2408
AxyI CCTNAGG 4 cut(s) 365, 437, 509, 2133
BaeGI GKGCMC 2 cut(s) 2227, 2268
BalI TGGCCA 2 cut(s) 1842, 2023
BamHI GGATCC 3 cut(s) 413, 485, 2340
BanI GGYRCC 2 cut(s) 643, 2015
BanII GRGCYC 1 cut(s) 1626
BbsI GAAGAC 1 cut(s) 2671
Bbv12I GWGCWC 2 cut(s) 35, 2227
BbvI GCAGC 1 cut(s) 1318
BccI CCATC 4 cut(s) 545, 1000, 1564, 2574
BciT130I CCWGG 7 cut(s) 411, 483, 555, 1415, 1844, 2020, 2025
BciVI GTATCC 1 cut(s) 352
BcoDI GTCTC 4 cut(s) 599, 1002, 1081, 2006
BfaI CTAG 4 cut(s) 1814, 1859, 2045, 2175
BfoI RGCGCY 1 cut(s) 21
BfuI GTATCC 1 cut(s) 352
BglII AGATCT 2 cut(s) 633, 811
BisI GCNGC 1 cut(s) 1332
BlpI GCTNAGC 1 cut(s) 2258
BlsI GCNGC 1 cut(s) 1333
BmcAI AGTACT 1 cut(s) 2353
Bme1390I CCNGG 7 cut(s) 411, 483, 555, 1415, 1844, 2020, 2025
Bme18I GGWCC 8 cut(s) 329, 401, 732, 908, 1968, 2123, 2239, 2408
BmeRI GACNNNNNGTC 2 cut(s) 382, 454
BmeT110I CYCGRG 3 cut(s) 34, 1531, 2228
BmgT120I GGNCC 9 cut(s) 329, 401, 732, 908, 1211, 1968, 2123, 2239, 2408
BmrFI CCNGG 7 cut(s) 411, 483, 555, 1415, 1844, 2020, 2025
BmrI ACTGGG 1 cut(s) 937
BmsI GCATC 2 cut(s) 2097, 2622
BmuI ACTGGG 1 cut(s) 937
BpiI GAAGAC 1 cut(s) 2671
Bpu1102I GCTNAGC 1 cut(s) 2258
Bpu14I TTCGAA 1 cut(s) 530
BpuEI CTTGAG 5 cut(s) 328, 544, 610, 1384, 2606
Bsa29I ATCGAT 1 cut(s) 973
BsaJI CCNNGG 6 cut(s) 904, 1414, 1482, 2024, 2062, 2111
BsaWI WCCGGW 2 cut(s) 326, 398
BsaXI ACNNNNNCTCC 6 cut(s) 149, 179, 308, 338, 380, 410
Bsc4I CCNNNNNNNGG 8 cut(s) 410, 482, 554, 1208, 1414, 2025, 2480, 2638
Bse1I ACTGG 5 cut(s) 338, 932, 1386, 1768, 2349
Bse21I CCTNAGG 4 cut(s) 365, 437, 509, 2133
Bse3DI GCAATG 4 cut(s) 1651, 1705, 1725, 2185
BseBI CCWGG 7 cut(s) 411, 483, 555, 1415, 1844, 2020, 2025
BseCI ATCGAT 1 cut(s) 973
BseDI CCNNGG 6 cut(s) 904, 1414, 1482, 2024, 2062, 2111
BseGI GGATG 1 cut(s) 2613
BseLI CCNNNNNNNGG 8 cut(s) 410, 482, 554, 1208, 1414, 2025, 2480, 2638
BseMI GCAATG 4 cut(s) 1651, 1705, 1725, 2185
BseNI ACTGG 5 cut(s) 338, 932, 1386, 1768, 2349
BseRI GAGGAG 2 cut(s) 1288, 2001
BseSI GKGCMC 2 cut(s) 2227, 2268
BseXI GCAGC 1 cut(s) 1318
BseYI CCCAGC 1 cut(s) 1264
BshFI GGCC 5 cut(s) 1158, 1212, 1842, 2023, 2470
BshNI GGYRCC 2 cut(s) 643, 2015
BshVI ATCGAT 1 cut(s) 973
BsiHKAI GWGCWC 2 cut(s) 35, 2227
BsiHKCI CYCGRG 3 cut(s) 34, 1531, 2228
BsiSI CCGG 2 cut(s) 327, 399
BslFI GGGAC 1 cut(s) 763
BslI CCNNNNNNNGG 8 cut(s) 410, 482, 554, 1208, 1414, 2025, 2480, 2638
BsmAI GTCTC 4 cut(s) 599, 1002, 1081, 2006
BsmBI CGTCTC 1 cut(s) 1002
BsmFI GGGAC 1 cut(s) 763
BsnI GGCC 5 cut(s) 1158, 1212, 1842, 2023, 2470
BsoBI CYCGRG 3 cut(s) 34, 1531, 2228
Bsp119I TTCGAA 1 cut(s) 530
Bsp1286I GDGCHC 4 cut(s) 35, 1626, 2227, 2268
Bsp1407I TGTACA 2 cut(s) 882, 2607
Bsp1720I GCTNAGC 1 cut(s) 2258
Bsp19I CCATGG 1 cut(s) 904
BspACI CCGC 3 cut(s) 88, 1966, 2262
BspANI GGCC 5 cut(s) 1158, 1212, 1842, 2023, 2470
BspDI ATCGAT 1 cut(s) 973
BspHI TCATGA 1 cut(s) 150
BspQI GCTCTTC 2 cut(s) 1014, 1928
BspT104I TTCGAA 1 cut(s) 530
BspT107I GGYRCC 2 cut(s) 643, 2015
BsrBI CCGCTC 1 cut(s) 2262
BsrDI GCAATG 4 cut(s) 1651, 1705, 1725, 2185
BsrGI TGTACA 2 cut(s) 882, 2607
BsrI ACTGG 5 cut(s) 338, 932, 1386, 1768, 2349
BssECI CCNNGG 6 cut(s) 904, 1414, 1482, 2024, 2062, 2111
BssT1I CCWWGG 2 cut(s) 904, 1482
Bst2UI CCWGG 7 cut(s) 411, 483, 555, 1415, 1844, 2020, 2025
Bst4CI ACNGT 3 cut(s) 1590, 2115, 2458
Bst6I CTCTTC 4 cut(s) 732, 1014, 1084, 1928
BstAUI TGTACA 2 cut(s) 882, 2607
BstBI TTCGAA 1 cut(s) 530
BstC8I GCNNGC 1 cut(s) 2264
BstDSI CCRYGG 3 cut(s) 904, 2062, 2111
BstF5I GGATG 1 cut(s) 2613
BstH2I RGCGCY 1 cut(s) 21
BstHHI GCGC 2 cut(s) 20, 1725
BstMAI GTCTC 4 cut(s) 599, 1002, 1081, 2006
BstMWI GCNNNNNNNGC 2 cut(s) 1923, 2263
BstNI CCWGG 7 cut(s) 411, 483, 555, 1415, 1844, 2020, 2025
BstNSI RCATGY 2 cut(s) 889, 2672
BstSCI CCNGG 7 cut(s) 409, 481, 553, 1413, 1842, 2018, 2023
BstSLI GKGCMC 2 cut(s) 2227, 2268
BstV1I GCAGC 1 cut(s) 1318
BstV2I GAAGAC 1 cut(s) 2671
BstX2I RGATCY 8 cut(s) 413, 472, 485, 633, 722, 811, 2340, 2506
BstXI CCANNNNNNTGG 1 cut(s) 130
BstYI RGATCY 8 cut(s) 413, 472, 485, 633, 722, 811, 2340, 2506
Bsu15I ATCGAT 1 cut(s) 973
Bsu36I CCTNAGG 4 cut(s) 365, 437, 509, 2133
BsuI GTATCC 1 cut(s) 352
BsuRI GGCC 5 cut(s) 1158, 1212, 1842, 2023, 2470
BsuTUI ATCGAT 1 cut(s) 973
BtgI CCRYGG 3 cut(s) 904, 2062, 2111
BtsCI GGATG 1 cut(s) 2613
BtsIMutI CAGTG 7 cut(s) 604, 1586, 1696, 1738, 1761, 2463, 2521
Cac8I GCNNGC 1 cut(s) 2264
CciI TCATGA 1 cut(s) 150
CfoI GCGC 2 cut(s) 20, 1725
Cfr13I GGNCC 9 cut(s) 329, 401, 732, 908, 1211, 1968, 2123, 2239, 2408
ClaI ATCGAT 1 cut(s) 973
Csp6I GTAC 6 cut(s) 644, 883, 1281, 1736, 2352, 2608
CspCI CAANNNNNGTGG 2 cut(s) 2262, 2297
CviQI GTAC 6 cut(s) 644, 883, 1281, 1736, 2352, 2608
DraI TTTAAA 2 cut(s) 682, 1887
DrdI GACNNNNNNGTC 1 cut(s) 2406
DriI GACNNNNNGTC 2 cut(s) 382, 454
DseDI GACNNNNNNGTC 1 cut(s) 2406
EaeI YGGCCR 2 cut(s) 1840, 2021
Eam1104I CTCTTC 4 cut(s) 732, 1014, 1084, 1928
Eam1105I GACNNNNNGTC 2 cut(s) 382, 454
EarI CTCTTC 4 cut(s) 732, 1014, 1084, 1928
Eco130I CCWWGG 2 cut(s) 904, 1482
Eco147I AGGCCT 2 cut(s) 1158, 2470
Eco24I GRGCYC 1 cut(s) 1626
Eco47I GGWCC 8 cut(s) 329, 401, 732, 908, 1968, 2123, 2239, 2408
Eco57I CTGAAG 1 cut(s) 251
Eco81I CCTNAGG 4 cut(s) 365, 437, 509, 2133
Eco88I CYCGRG 3 cut(s) 34, 1531, 2228
EcoO109I RGGNCCY 1 cut(s) 2408
EcoRII CCWGG 7 cut(s) 409, 481, 553, 1413, 1842, 2018, 2023
EcoT14I CCWWGG 2 cut(s) 904, 1482
EcoT38I GRGCYC 1 cut(s) 1626
ErhI CCWWGG 2 cut(s) 904, 1482
Esp3I CGTCTC 1 cut(s) 1002
FalI AAGNNNNNCTT 2 cut(s) 2067, 2099
FaqI GGGAC 1 cut(s) 763
FauI CCCGC 1 cut(s) 2255
Fnu4HI GCNGC 1 cut(s) 1332
FokI GGATG 1 cut(s) 2600
FriOI GRGCYC 1 cut(s) 1626
Fsp4HI GCNGC 1 cut(s) 1332
FspBI CTAG 4 cut(s) 1814, 1859, 2045, 2175
FspI TGCGCA 1 cut(s) 1724
GlaI GCGC 2 cut(s) 19, 1724
GluI GCNGC 1 cut(s) 1332
GsaI CCCAGC 1 cut(s) 1268
HaeII RGCGCY 1 cut(s) 21
HaeIII GGCC 5 cut(s) 1158, 1212, 1842, 2023, 2470
HapII CCGG 2 cut(s) 327, 399
HhaI GCGC 2 cut(s) 20, 1725
Hin6I GCGC 2 cut(s) 18, 1723
HinP1I GCGC 2 cut(s) 18, 1723
HincII GTYRAC 2 cut(s) 582, 2167
HindII GTYRAC 2 cut(s) 582, 2167
HindIII AAGCTT 1 cut(s) 1105
HpaII CCGG 2 cut(s) 327, 399
HphI GGTGA 4 cut(s) 1067, 1580, 2078, 2436
Hpy166II GTNNAC 7 cut(s) 582, 1058, 1736, 2167, 2225, 2608, 2674
Hpy188I TCNGA 6 cut(s) 27, 96, 472, 544, 1402, 2345
Hpy8I GTNNAC 7 cut(s) 582, 1058, 1736, 2167, 2225, 2608, 2674
Hpy99I CGWCG 1 cut(s) 2664
HpyAV CCTTC 7 cut(s) 224, 1115, 1169, 1257, 2429, 2460, 2627
HpyCH4III ACNGT 3 cut(s) 1590, 2115, 2458
HpyCH4V TGCA 9 cut(s) 825, 889, 1064, 1618, 1644, 1718, 1869, 2225, 2574
HpyF10VI GCNNNNNNNGC 2 cut(s) 1923, 2263
HspAI GCGC 2 cut(s) 18, 1723
KpnI GGTACC 1 cut(s) 647
LguI GCTCTTC 2 cut(s) 1014, 1928
LmnI GCTCC 1 cut(s) 2144
Lsp1109I GCAGC 1 cut(s) 1318
LweI GCATC 2 cut(s) 2097, 2622
MaeI CTAG 4 cut(s) 1814, 1859, 2045, 2175
MaeIII GTNAC 6 cut(s) 1475, 1486, 2213, 2244, 2390, 2442
MbiI CCGCTC 1 cut(s) 2262
MfeI CAATTG 2 cut(s) 869, 1255
MflI RGATCY 8 cut(s) 413, 472, 485, 633, 722, 811, 2340, 2506
MhlI GDGCHC 4 cut(s) 35, 1626, 2227, 2268
MlsI TGGCCA 2 cut(s) 1842, 2023
MluNI TGGCCA 2 cut(s) 1842, 2023
MlyI GAGTC 2 cut(s) 601, 770
Mox20I TGGCCA 2 cut(s) 1842, 2023
MroXI GAANNNNTTC 2 cut(s) 974, 1771
MscI TGGCCA 2 cut(s) 1842, 2023
MseI TTAA 8 cut(s) 204, 681, 924, 942, 1103, 1740, 1886, 2499
MslI CAYNNNNRTG 3 cut(s) 1639, 2230, 2490
Msp20I TGGCCA 2 cut(s) 1842, 2023
MspI CCGG 2 cut(s) 327, 399
MspR9I CCNGG 7 cut(s) 411, 483, 555, 1415, 1844, 2020, 2025
MunI CAATTG 2 cut(s) 869, 1255
MvaI CCWGG 7 cut(s) 411, 483, 555, 1415, 1844, 2020, 2025
MwoI GCNNNNNNNGC 2 cut(s) 1923, 2263
NcoI CCATGG 1 cut(s) 904
NmuCI GTSAC 2 cut(s) 2244, 2442
NsbI TGCGCA 1 cut(s) 1724
NspI RCATGY 2 cut(s) 889, 2672
NspV TTCGAA 1 cut(s) 530
OliI CACNNNNGTG 1 cut(s) 2230
PaeR7I CTCGAG 2 cut(s) 1531, 2228
PagI TCATGA 1 cut(s) 150
PceI AGGCCT 2 cut(s) 1158, 2470
PciI ACATGT 1 cut(s) 2668
PciSI GCTCTTC 2 cut(s) 1014, 1928
PcsI WCGNNNNNNNCGW 1 cut(s) 62
PdmI GAANNNNTTC 2 cut(s) 974, 1771
PflMI CCANNNNNTGG 1 cut(s) 2480
PfoI TCCNGGA 3 cut(s) 409, 481, 553
PkrI GCNGC 1 cut(s) 1333
PleI GAGTC 2 cut(s) 600, 770
PpsI GAGTC 2 cut(s) 600, 770
PpuMI RGGWCCY 1 cut(s) 2408
PscI ACATGT 1 cut(s) 2668
PshBI ATTAAT 1 cut(s) 942
Psp5II RGGWCCY 1 cut(s) 2408
Psp6I CCWGG 7 cut(s) 409, 481, 553, 1413, 1842, 2018, 2023
PspFI CCCAGC 1 cut(s) 1264
PspGI CCWGG 7 cut(s) 409, 481, 553, 1413, 1842, 2018, 2023
PspPI GGNCC 9 cut(s) 329, 401, 732, 908, 1211, 1968, 2123, 2239, 2408
PspPPI RGGWCCY 1 cut(s) 2408
PspXI VCTCGAGB 1 cut(s) 2228
PsuI RGATCY 8 cut(s) 413, 472, 485, 633, 722, 811, 2340, 2506
RsaI GTAC 6 cut(s) 645, 884, 1282, 1737, 2353, 2609
RsaNI GTAC 6 cut(s) 644, 883, 1281, 1736, 2352, 2608
RseI CAYNNNNRTG 3 cut(s) 1639, 2230, 2490
SapI GCTCTTC 2 cut(s) 1014, 1928
SaqAI TTAA 8 cut(s) 204, 681, 924, 942, 1103, 1740, 1886, 2499
SatI GCNGC 1 cut(s) 1332
Sau96I GGNCC 9 cut(s) 329, 401, 732, 908, 1211, 1968, 2123, 2239, 2408
ScaI AGTACT 1 cut(s) 2353
SchI GAGTC 2 cut(s) 601, 770
ScrFI CCNGG 7 cut(s) 411, 483, 555, 1415, 1844, 2020, 2025
SduI GDGCHC 4 cut(s) 35, 1626, 2227, 2268
SfaNI GCATC 2 cut(s) 2097, 2622
Sfr274I CTCGAG 2 cut(s) 1531, 2228
SfuI TTCGAA 1 cut(s) 530
SinI GGWCC 8 cut(s) 329, 401, 732, 908, 1968, 2123, 2239, 2408
SlaI CTCGAG 2 cut(s) 1531, 2228
SmiMI CAYNNNNRTG 3 cut(s) 1639, 2230, 2490
SmlI CTYRAG 7 cut(s) 307, 523, 589, 1363, 1531, 2228, 2621
SmoI CTYRAG 7 cut(s) 307, 523, 589, 1363, 1531, 2228, 2621
SseBI AGGCCT 2 cut(s) 1158, 2470
SsiI CCGC 3 cut(s) 88, 1966, 2262
SspI AATATT 3 cut(s) 1468, 1564, 1657
SspMI CTAG 4 cut(s) 1814, 1859, 2045, 2175
StuI AGGCCT 2 cut(s) 1158, 2470
StyD4I CCNGG 7 cut(s) 409, 481, 553, 1413, 1842, 2018, 2023
StyI CCWWGG 2 cut(s) 904, 1482
TaaI ACNGT 3 cut(s) 1590, 2115, 2458
TaqII GACCGA 1 cut(s) 720
TatI WGTACW 4 cut(s) 882, 1735, 2351, 2607
Tru1I TTAA 8 cut(s) 204, 681, 924, 942, 1103, 1740, 1886, 2499
Tru9I TTAA 8 cut(s) 204, 681, 924, 942, 1103, 1740, 1886, 2499
TscAI CASTG 7 cut(s) 604, 1593, 1696, 1738, 1768, 2463, 2521
TseFI GTSAC 2 cut(s) 2244, 2442
TseI GCWGC 1 cut(s) 1331
Tsp45I GTSAC 2 cut(s) 2244, 2442
TspDTI ATGAA 6 cut(s) 206, 807, 1308, 1791, 2287, 2340
TspGWI ACGGA 2 cut(s) 1191, 2051
TspRI CASTG 7 cut(s) 604, 1593, 1696, 1738, 1768, 2463, 2521
Van91I CCANNNNNTGG 1 cut(s) 2480
VneI GTGCAC 1 cut(s) 2223
VpaK11BI GGWCC 8 cut(s) 329, 401, 732, 908, 1968, 2123, 2239, 2408
VspI ATTAAT 1 cut(s) 942
XapI RAATTY 6 cut(s) 161, 704, 1147, 1324, 1809, 2476
XbaI TCTAGA 1 cut(s) 1813
XceI RCATGY 2 cut(s) 889, 2672
XcmI CCANNNNNNNNNTGG 1 cut(s) 2207
XhoI CTCGAG 2 cut(s) 1531, 2228
XmnI GAANNNNTTC 2 cut(s) 974, 1771
XspI CTAG 4 cut(s) 1814, 1859, 2045, 2175
ZrmI AGTACT 1 cut(s) 2353
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.